Citrus Sinensis ID: 016468
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 389 | 2.2.26 [Sep-21-2011] | |||||||
| Q4R7R1 | 393 | Short-chain dehydrogenase | N/A | no | 0.650 | 0.643 | 0.509 | 4e-65 | |
| Q9D665 | 394 | Short-chain dehydrogenase | yes | no | 0.655 | 0.647 | 0.498 | 9e-65 | |
| Q8WUS8 | 393 | Short-chain dehydrogenase | yes | no | 0.650 | 0.643 | 0.501 | 2e-64 | |
| Q32L94 | 393 | Short-chain dehydrogenase | yes | no | 0.650 | 0.643 | 0.490 | 3e-63 | |
| A8DZE7 | 387 | Short-chain dehydrogenase | yes | no | 0.655 | 0.658 | 0.467 | 1e-62 | |
| Q0IH73 | 386 | Short-chain dehydrogenase | N/A | no | 0.642 | 0.647 | 0.449 | 2e-58 | |
| A6NKP2 | 422 | Putative short-chain dehy | no | no | 0.647 | 0.597 | 0.421 | 8e-52 | |
| Q9FX01 | 439 | 3beta-hydroxysteroid-dehy | no | no | 0.660 | 0.585 | 0.357 | 7e-40 | |
| Q67ZE1 | 564 | 3beta-hydroxysteroid-dehy | no | no | 0.676 | 0.466 | 0.342 | 3e-37 | |
| O53454 | 370 | 3 beta-hydroxysteroid deh | yes | no | 0.616 | 0.648 | 0.327 | 4e-33 |
| >sp|Q4R7R1|D42E1_MACFA Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/263 (50%), Positives = 173/263 (65%), Gaps = 10/263 (3%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++EVNI GT ++++AC + RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRNLIEEVNIGGTDNILQACQRRRVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL++NG P + + L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEKKVLEANGTPLDRGD-GVLRTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L D KG IASGQPYF+SDG
Sbjct: 203 YIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRAD----KGH-IASGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L L L F+F +++ L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYTFPSTRL----PLTLVYCFAFLTEMVHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KAK EL Y
Sbjct: 314 TEVYKTGVTHYFSLEKAKKELGY 336
|
Macaca fascicularis (taxid: 9541) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9D665|D42E1_MOUSE Short-chain dehydrogenase/reductase family 42E member 1 OS=Mus musculus GN=Sdr42e1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 247 bits (631), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/265 (49%), Positives = 174/265 (65%), Gaps = 10/265 (3%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L +++EVN+ GT +++ ACLE G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 85 MSGREQLNKTQIEEVNVGGTENILRACLERGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 144
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL++NG FK+ + L TCA+RPA IYG GE+RHLPRIVS
Sbjct: 145 PLHLHPDHYSRTKSIAEKKVLEANGLAFKQGD-GILRTCAIRPAGIYGAGEQRHLPRIVS 203
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNL A ILAS L D KG +ASGQPYF+SDG
Sbjct: 204 YIERGLFRFVYGDPQSLVEFVHVDNLAKAHILASEALKAD----KGH-VASGQPYFISDG 258
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L L L +F + + + R + QP +
Sbjct: 259 RPVNNFEFFRPLVEGLGYTFPSTRL----PLTLIYCLAFLVEMTHFIVGRLYNFQPFLTR 314
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVP 265
EVYK GVTHYFSL KAK EL + P
Sbjct: 315 TEVYKTGVTHYFSLEKAKKELGFEP 339
|
Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q8WUS8|D42E1_HUMAN Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/263 (50%), Positives = 170/263 (64%), Gaps = 10/263 (3%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L + EVN+ GT ++++ C + RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AEQ VL++N P + + L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEQKVLEANATPLDRGD-GVLRTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L D KG IASGQPYF+SDG
Sbjct: 203 YIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRAD----KGH-IASGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L L L F+F +++ L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYTFPSTRL----PLTLVYCFAFLTEMVHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KAK EL Y
Sbjct: 314 TEVYKTGVTHYFSLEKAKKELGY 336
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q32L94|D42E1_BOVIN Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 170/263 (64%), Gaps = 10/263 (3%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++E+N+ GT ++++AC G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRSLIEEINVGGTDNILQACRRRGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL +NG ++ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEKKVLSANGTALERGG-GVLSTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L KG IA+GQPYF+SDG
Sbjct: 203 YIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASEAL----KANKGH-IAAGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L L L F+F + + L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYKFPSTRL----PLTLIYCFAFLTEMTHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KA+ EL Y
Sbjct: 314 TEVYKTGVTHYFSLEKARKELGY 336
|
Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A8DZE7|D42E1_DANRE Short-chain dehydrogenase/reductase family 42E member 1 OS=Danio rerio GN=sdr42e1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 171/265 (64%), Gaps = 10/265 (3%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++EVN+ GT +++ AC+ + RL+Y ST+NVVFGG+EI NG+ESLPY
Sbjct: 81 MSGREQLNRKLIEEVNVKGTENILRACVAHSVPRLIYTSTFNVVFGGQEIKNGDESLPYL 140
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE VLK+N N+ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 141 PLHLHPDHYSRTKSIAEMQVLKANNLAL-SNSTGVLRTCALRPAGIYGPGEQRHLPRIVS 199
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ G+ F G+P ++++VDNLV A +LA+ D +K + A+GQ YF+SDG
Sbjct: 200 YIENGIFRFVYGDPDSLVEFVHVDNLVSAHLLAA-----DALTEKQQCRAAGQAYFISDG 254
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P L + F F+F +++ + R + QPL+
Sbjct: 255 RPVNNFEFFRPLVEGLGYSFPTLRLPISMIYF----FAFLTEMVHFVVGRIYNFQPLLTR 310
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVP 265
EVYK GVTHYFS+ KA++EL Y P
Sbjct: 311 TEVYKTGVTHYFSMRKAREELGYEP 335
|
Danio rerio (taxid: 7955) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q0IH73|D42E1_XENLA Short-chain dehydrogenase/reductase family 42E member 1 OS=Xenopus laevis GN=sdr42e1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 172/269 (63%), Gaps = 19/269 (7%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKE L +++ +N+ GT ++I+AC+ + RLVY ST+NV+FGG+ I +G+ESLPY
Sbjct: 82 MSGKEQLHRQKIEAINVRGTENIIQACINTNVPRLVYTSTFNVIFGGQTIRDGDESLPYL 141
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P D VD+Y R+K+VAE VLK N + KNN L TC++R A IYGPGE+RHLPRI+S
Sbjct: 142 PQDAFVDNYSRTKTVAEMFVLKMNNQEL-KNNSGFLRTCSLRAAGIYGPGEQRHLPRIIS 200
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ G+ F G+ + +++VDNL+ A ILA+ L + + IA+GQPYF+SDG
Sbjct: 201 ALEKGMFLFVYGDNPL-VQFVHVDNLISAHILAAEALTSE-----KKYIAAGQPYFISDG 254
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP----QP 236
P+N FEF PL++ L Y P L P +L +F++ L W++ + P QP
Sbjct: 255 PPVNNFEFFRPLVEGLGYKFPS--LRFPLSLV------YFFAFLTEWIHFFISPVCDFQP 306
Query: 237 LILPAEVYKVGVTHYFSLLKAKDELCYVP 265
++ AEV+K GVTHYF + KA EL + P
Sbjct: 307 ILTRAEVFKTGVTHYFKIEKATRELGFEP 335
|
Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|A6NKP2|D42E2_HUMAN Putative short-chain dehydrogenase/reductase family 42E member 2 OS=Homo sapiens GN=SDR42E2 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 158/268 (58%), Gaps = 16/268 (5%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNE-SLPY 59
MSG E LQ +++ +N+ GT VI+ C+ + RL+Y ST NV FGGK I G+E S+PY
Sbjct: 107 MSGAEKLQKEQIESINVGGTKLVIDVCVRRRVPRLIYTSTVNVAFGGKPIEQGDEDSVPY 166
Query: 60 FPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIV 119
FP+DEHVD Y R+K++A+QL L +NG P L TC +RP IYGP E+RHLPR+
Sbjct: 167 FPLDEHVDHYSRTKAIADQLTLMANGMPLPGGG--TLRTCVLRPPGIYGPEEQRHLPRVA 224
Query: 120 SLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD 179
K L F+ G+ + +W++V NLV A +LA+ L KG +ASGQ Y+++D
Sbjct: 225 GHIKKRLFMFRFGDHKARMNWVHVHNLVQAHVLAAEALTT----AKGY-VASGQAYYIND 279
Query: 180 GFPINTFEFIGPLLKTLDYDLPKSWLAVPHA--LFLGKVFSFFYSVLYPWLNRWWLPQPL 237
G +N FE++ PL + L Y P W+ VP + V + L P + LP PL
Sbjct: 280 GESVNLFEWMAPLFEKLGYSQP--WIQVPTSWVYLTAAVMERLHLALRPICS---LP-PL 333
Query: 238 ILPAEVYKVGVTHYFSLLKAKDELCYVP 265
+ +EV V VTH F + KA+ +L Y P
Sbjct: 334 LTRSEVRSVAVTHTFQIAKARAQLGYAP 361
|
Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|Q9FX01|HSDD1_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 OS=Arabidopsis thaliana GN=3BETAHSD/D1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (416), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 157/274 (57%), Gaps = 17/274 (6%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRSK 73
VN+ GT +VI+AC+E G++RL+Y S+ +VVF G +N +ESLPY P +H DSY +K
Sbjct: 108 VNVQGTTNVIDACIEVGVKRLIYTSSPSVVFDGVHGTLNADESLPYPP--KHNDSYSATK 165
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE 133
+ E L+LK+NGR L TC +RP++I+GPG++ +P +V+ A+ G F IG+
Sbjct: 166 AEGEALILKANGR-------SGLLTCCIRPSSIFGPGDKLMVPSLVTAARAGKSKFIIGD 218
Query: 134 PSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLL 193
S D+ YV+N+V A + A L G + A+GQ YF+++ PI +EF+ LL
Sbjct: 219 GSNFYDFTYVENVVHAHVCAERALAS---GGEVCAKAAGQAYFITNMEPIKFWEFMSQLL 275
Query: 194 KTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFS 253
+ L Y+ P + +P +L + ++ + Y L + + P++ P+ V + F
Sbjct: 276 EGLGYERPS--IKIPASLMMP--IAYLVELAYKLLGPYGMKVPVLTPSRVRLLSCNRTFD 331
Query: 254 LLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287
KAKD L Y P+V +EG+ TI + K ++
Sbjct: 332 SSKAKDRLGYSPVVPLQEGIKRTIDSFSHLKAQN 365
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 0 |
| >sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/283 (34%), Positives = 156/283 (55%), Gaps = 20/283 (7%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRS 72
VN+ GT +VI+AC++ G++RL+Y S+ +VVF G I+NG ES+ Y PI +H DSY +
Sbjct: 107 SVNVQGTQNVIDACVDVGVKRLIYTSSPSVVFDGVHGILNGTESMAY-PI-KHNDSYSAT 164
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIG 132
K+ E+L++K+NGR L TC +RP++I+GPG+ +P +V+ A+ G F IG
Sbjct: 165 KAEGEELIMKANGR-------NGLLTCCIRPSSIFGPGDRLLVPSLVAAARAGKSKFIIG 217
Query: 133 EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL 192
+ + D+ YV+N+ A + A L G A+GQ YF+++ PI +EF+ L
Sbjct: 218 DGNNLYDFTYVENVAHAHVCAERALAS---GGDVSTKAAGQAYFITNMEPIKFWEFMSQL 274
Query: 193 LKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYF 252
L L Y+ P + +P F+ + + Y L + + P + P+ V + + F
Sbjct: 275 LDGLGYERPS--IKIP--AFIMMPIAHLVELTYKVLGPYGMTVPQLTPSRVRLLSCSRTF 330
Query: 253 SLLKAKDELCYVPIVSPREGMAATI---SYWQDRKRKSLDGPT 292
KAKD L Y P+V +EG+ TI S+ + +GP+
Sbjct: 331 DSTKAKDRLGYAPVVPLQEGIRRTIDSFSHLTAGSQSKREGPS 373
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 0 |
| >sp|O53454|3BHS_MYCTU 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase OS=Mycobacterium tuberculosis GN=Rv1106c PE=1 SV=1 | Back alignment and function description |
|---|
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 137/269 (50%), Gaps = 29/269 (10%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKS 74
VN+ GT +++ A G+QR VY S+ +VV GG+ I G+E+LPY D D Y +K
Sbjct: 106 VNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPY--TDRFNDLYTETKV 163
Query: 75 VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEP 134
VAE+ VL NG + TCA+RP+ I+G G++ ++ G V +G
Sbjct: 164 VAERFVLAQNG-------VDGMLTCAIRPSGIWGNGDQTMFRKLFESVLKGHVKVLVGRK 216
Query: 135 SVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLK 194
S + D YV NL+ ILA+ L+ D A GQ YF++D PIN FEF P+L+
Sbjct: 217 SARLDNSYVHNLIHGFILAAAHLVPD-------GTAPGQAYFINDAEPINMFEFARPVLE 269
Query: 195 TLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLN---RWWLPQPLILPAEVYKVGVTHY 251
PK ++ P + V+ W R+ P PL+ P V ++ + +Y
Sbjct: 270 ACGQRWPKMRISGPAVRW----------VMTGWQRLHFRFGFPAPLLEPLAVERLYLDNY 319
Query: 252 FSLLKAKDELCYVPIVSPREGMAATISYW 280
FS+ KA+ +L Y P+ + ++ + + Y+
Sbjct: 320 FSIAKARRDLGYEPLFTTQQALTECLPYY 348
|
3-beta-HSD is a bifunctional enzyme, that catalyzes the oxidation and isomerization of cholesterol, pregnenolone, and dehydroepiandrosterone (DHEA) into cholest-4-en-3-one, progesterone, and androsterone, respectively. Mycobacterium tuberculosis (taxid: 1773) EC: 5 EC: . EC: 3 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 389 | ||||||
| 255539320 | 478 | hydroxysteroid dehydrogenase, putative [ | 1.0 | 0.813 | 0.771 | 0.0 | |
| 418729183 | 478 | 3-beta-hydroxy-delta5-steroid dehydrogen | 1.0 | 0.813 | 0.763 | 0.0 | |
| 225457644 | 478 | PREDICTED: short-chain dehydrogenase/red | 1.0 | 0.813 | 0.735 | 1e-177 | |
| 297745599 | 479 | unnamed protein product [Vitis vinifera] | 0.979 | 0.795 | 0.732 | 1e-173 | |
| 449455641 | 478 | PREDICTED: short-chain dehydrogenase/red | 1.0 | 0.813 | 0.706 | 1e-171 | |
| 15226138 | 480 | Rossmann-fold NAD(P)-binding domain-cont | 0.997 | 0.808 | 0.719 | 1e-168 | |
| 297826819 | 480 | 3-beta hydroxysteroid dehydrogenase/isom | 0.994 | 0.806 | 0.724 | 1e-167 | |
| 356553309 | 478 | PREDICTED: short-chain dehydrogenase/red | 1.0 | 0.813 | 0.699 | 1e-166 | |
| 356564410 | 491 | PREDICTED: short-chain dehydrogenase/red | 1.0 | 0.792 | 0.700 | 1e-165 | |
| 388497514 | 479 | unknown [Lotus japonicus] | 1.0 | 0.812 | 0.697 | 1e-165 |
| >gi|255539320|ref|XP_002510725.1| hydroxysteroid dehydrogenase, putative [Ricinus communis] gi|223551426|gb|EEF52912.1| hydroxysteroid dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/389 (77%), Positives = 346/389 (88%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEM++FGRVDEVNINGTCHV+EAC+EFGI+RLVYVSTYNVVFGGK+IVNGNESLPYF
Sbjct: 90 MSGKEMIRFGRVDEVNINGTCHVLEACIEFGIKRLVYVSTYNVVFGGKQIVNGNESLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P D+HVDSYG SKS+AEQLVLK NGRP KKNN K LYTCA+RPAAIYGPGEERH+PRIVS
Sbjct: 150 PTDDHVDSYGGSKSIAEQLVLKYNGRPLKKNNGKRLYTCAIRPAAIYGPGEERHMPRIVS 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
AKLGL+PF+IG+ +VKTDW+YVDNLVLALILASMGLLDDIP G P+A+GQPYF+SDG
Sbjct: 210 YAKLGLMPFRIGDANVKTDWVYVDNLVLALILASMGLLDDIPNSGGHPVAAGQPYFISDG 269
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
PIN+FEF+ PLLK+L+YD+PK+ L+VPHAL LGK+F Y++LYPWLNRWWLPQP ILP
Sbjct: 270 SPINSFEFLQPLLKSLNYDMPKASLSVPHALILGKIFGAIYTLLYPWLNRWWLPQPFILP 329
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP+V+PREGMAATI+YWQ++KRKSLDGPTIY WLF +
Sbjct: 330 AEVYKVGVTHYFSFLKAKEELGYVPMVTPREGMAATIAYWQEKKRKSLDGPTIYIWLFAV 389
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ LF AYLPDIGPVP+ R I LF +SM M R F +A +AH+ E ++AW LAK+V
Sbjct: 390 IGMSTLFCAAYLPDIGPVPLFRAISLFFLRSMRMTRTVFLLASAAHIGESIYAWHLAKRV 449
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DPANA+GWFWQTLALG+FSLR LLKRARK
Sbjct: 450 DPANARGWFWQTLALGIFSLRFLLKRARK 478
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|418729183|gb|AFX66971.1| 3-beta-hydroxy-delta5-steroid dehydrogenase [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/389 (76%), Positives = 347/389 (89%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEMLQ+ RVDEVNINGTCH+I+ACL+ I+RLVYVST NVV+GGKEIVNGNE+LPYF
Sbjct: 90 MSGKEMLQYSRVDEVNINGTCHIIDACLDHQIKRLVYVSTPNVVYGGKEIVNGNENLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
PID+HVD YGRSKS+AEQLVLKSNGRPF K N KCLYTCA+RPAAIYGPGEERHLPRI++
Sbjct: 150 PIDDHVDPYGRSKSIAEQLVLKSNGRPFTKKNGKCLYTCAIRPAAIYGPGEERHLPRIIT 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
L KLGL PFKIG P+VK+DW+YVDNLVLAL+LASMGLLDDIPG++G PIA+GQPYF+SDG
Sbjct: 210 LTKLGLFPFKIGSPNVKSDWVYVDNLVLALLLASMGLLDDIPGREGLPIAAGQPYFISDG 269
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
PIN+FEF+ PLLK+LDYDLPK+ LAV HAL LGK+F FYS LYPWLN WLPQPLILP
Sbjct: 270 SPINSFEFLLPLLKSLDYDLPKTSLAVSHALLLGKIFWAFYSFLYPWLNSRWLPQPLILP 329
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP+VS +EGMAATI+YWQ+RKR+SLDGPTI+AWLFC+
Sbjct: 330 AEVYKVGVTHYFSFLKAKEELGYVPMVSSKEGMAATIAYWQERKRRSLDGPTIWAWLFCV 389
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ ALFA AYLPD GP+P +R + LF F+SM +++ F +A +AHV E ++AW +AK +
Sbjct: 390 IGMSALFAAAYLPDYGPIPFIRAVHLFFFRSMLALKVIFVLAAAAHVGEAIYAWNVAKTI 449
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DPANA+GWFWQT ALG+FSLRLLLKRA+K
Sbjct: 450 DPANARGWFWQTFALGIFSLRLLLKRAKK 478
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457644|ref|XP_002275214.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 286/389 (73%), Positives = 344/389 (88%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEM+Q+GRVDEVNINGTCH+++AC+EFGI+RLVY STYNVVFGGKEI+NGNE+LPYF
Sbjct: 90 MSGKEMIQYGRVDEVNINGTCHILDACIEFGIKRLVYTSTYNVVFGGKEILNGNEALPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+D+HVDSY RSKS+AEQLVLK+NGRPFK + KCLYTCAVRPAAIYGPGE+RH PRI+S
Sbjct: 150 PLDDHVDSYSRSKSIAEQLVLKNNGRPFKNKSGKCLYTCAVRPAAIYGPGEDRHFPRIIS 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
LAKLG++PF IGE +VK DWIYVDNLV A ILASMGLLDDIPG++ RPIA+GQ YF++DG
Sbjct: 210 LAKLGVLPFTIGEANVKGDWIYVDNLVHAQILASMGLLDDIPGREKRPIAAGQSYFINDG 269
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N +EF+ PLL++L+YDLPK+ L VP+ALF+ ++ Y++LYPWLNRWWLPQPL+LP
Sbjct: 270 SPVNIYEFLRPLLRSLEYDLPKASLPVPYALFMSRINCMIYTLLYPWLNRWWLPQPLMLP 329
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP+VSPREGMAATISYWQ+RKR+SL+GPT+ WLFC+
Sbjct: 330 AEVYKVGVTHYFSYLKAKEELGYVPLVSPREGMAATISYWQERKRRSLEGPTLQTWLFCI 389
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ LF AYLPDIGPVPI R I LF +SM ++R+ F +A +AH+ E V+AW LAK+V
Sbjct: 390 IGMFVLFCAAYLPDIGPVPIFRAISLFFLRSMAIIRVVFLLATAAHIGEAVYAWHLAKRV 449
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DPANA+GWFWQT ALG+FSLR LLKRA+K
Sbjct: 450 DPANARGWFWQTFALGIFSLRFLLKRAKK 478
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745599|emb|CBI40764.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 279/381 (73%), Positives = 337/381 (88%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEM+Q+GRVDEVNINGTCH+++AC+EFGI+RLVY STYNVVFGGKEI+NGNE+LPYF
Sbjct: 90 MSGKEMIQYGRVDEVNINGTCHILDACIEFGIKRLVYTSTYNVVFGGKEILNGNEALPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+D+HVDSY RSKS+AEQLVLK+NGRPFK + KCLYTCAVRPAAIYGPGE+RH PRI+S
Sbjct: 150 PLDDHVDSYSRSKSIAEQLVLKNNGRPFKNKSGKCLYTCAVRPAAIYGPGEDRHFPRIIS 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
LAKLG++PF IGE +VK DWIYVDNLV A ILASMGLLDDIPG++ RPIA+GQ YF++DG
Sbjct: 210 LAKLGVLPFTIGEANVKGDWIYVDNLVHAQILASMGLLDDIPGREKRPIAAGQSYFINDG 269
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N +EF+ PLL++L+YDLPK+ L VP+ALF+ ++ Y++LYPWLNRWWLPQPL+LP
Sbjct: 270 SPVNIYEFLRPLLRSLEYDLPKASLPVPYALFMSRINCMIYTLLYPWLNRWWLPQPLMLP 329
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP+VSPREGMAATISYWQ+RKR+SL+GPT+ WLFC+
Sbjct: 330 AEVYKVGVTHYFSYLKAKEELGYVPLVSPREGMAATISYWQERKRRSLEGPTLQTWLFCI 389
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ LF AYLPDIGPVPI R I LF +SM ++R+ F +A +AH+ E V+AW LAK+V
Sbjct: 390 IGMFVLFCAAYLPDIGPVPIFRAISLFFLRSMAIIRVVFLLATAAHIGEAVYAWHLAKRV 449
Query: 361 DPANAKGWFWQTLALGVFSLR 381
DPANA+GWFWQT ALG+FSL+
Sbjct: 450 DPANARGWFWQTFALGIFSLQ 470
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449455641|ref|XP_004145560.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Cucumis sativus] gi|449522962|ref|XP_004168494.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 275/389 (70%), Positives = 334/389 (85%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
+SGKEMLQ GR+DEVNINGTCHV++ACLEFG++RL+Y+STYNVVFG +EIVNGNE LPY
Sbjct: 90 LSGKEMLQVGRIDEVNINGTCHVLDACLEFGVRRLIYMSTYNVVFGSQEIVNGNEGLPYL 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
PID+HVD+YGRSKS+AEQLVLK+NGRP K N KCL+TCA+R AIYGPGEERH R+VS
Sbjct: 150 PIDDHVDAYGRSKSIAEQLVLKTNGRPLKNRNGKCLHTCAIRSCAIYGPGEERHFTRLVS 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
LAKLGL+PF++G+ S KTDWIYVDNLVLALILASMGLLDDIPG+ P+A+GQPY+VSDG
Sbjct: 210 LAKLGLLPFRVGKQSAKTDWIYVDNLVLALILASMGLLDDIPGKGKDPVAAGQPYYVSDG 269
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N+FEF+ PLL +L YDLP +L VP AL LGK F+ Y++LYPWL+RWWLP PL+LP
Sbjct: 270 HPVNSFEFVKPLLNSLGYDLPNYYLPVPKALPLGKFFALLYTILYPWLDRWWLPHPLMLP 329
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AE+YKVGV++YFS LKAK+EL Y PIV+P+EGMAATISYWQ+R+RKSLDGPTIY WLFCL
Sbjct: 330 AEIYKVGVSNYFSYLKAKEELGYAPIVTPKEGMAATISYWQERERKSLDGPTIYVWLFCL 389
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
+G+ LF A+LPD+GPVP + I LF F+S+ ++R+ F +A+ HV E ++AW LA+KV
Sbjct: 390 VGMSILFCAAFLPDVGPVPFFKAISLFFFRSIKVLRMVFLVALLLHVGEAIYAWFLARKV 449
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DPAN++GWFWQT ALG FSLR LLKRAR
Sbjct: 450 DPANSRGWFWQTFALGFFSLRFLLKRARN 478
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15226138|ref|NP_180921.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|16226673|gb|AAL16229.1|AF428460_1 At2g33630/F4P9.40 [Arabidopsis thaliana] gi|2459443|gb|AAB80678.1| putative steroid dehydrogenase [Arabidopsis thaliana] gi|20260208|gb|AAM13002.1| putative steroid dehydrogenase [Arabidopsis thaliana] gi|330253770|gb|AEC08864.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 280/389 (71%), Positives = 337/389 (86%), Gaps = 1/389 (0%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEML+FGR DEVNINGTC+V+EA + I R+VYVSTYNVVFGGKEI+NGNE LPYF
Sbjct: 90 MSGKEMLRFGRCDEVNINGTCNVLEAAFKHEITRIVYVSTYNVVFGGKEILNGNEGLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+D+HVD+Y R+KS+AEQLVLKSNGRPFK N K +YTCA+RPAAIYGPGE+RHLPRIV+
Sbjct: 150 PLDDHVDAYSRTKSIAEQLVLKSNGRPFK-NGGKRMYTCAIRPAAIYGPGEDRHLPRIVT 208
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
L KLGL FKIGEPSVK+DWIYV+NLVLA+ILASMGLLDDIPG++G+P+A+GQPYFVSDG
Sbjct: 209 LTKLGLALFKIGEPSVKSDWIYVENLVLAIILASMGLLDDIPGREGQPVAAGQPYFVSDG 268
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
+P+NTFEF+ PLLK+LDYDLPK ++VP AL LGK+F FY+VLYPWL++ WLPQPL+LP
Sbjct: 269 YPVNTFEFLRPLLKSLDYDLPKCTISVPFALSLGKIFQGFYTVLYPWLSKSWLPQPLVLP 328
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP S +EGMAATISYWQ+RKR+SLDGPT++ W+
Sbjct: 329 AEVYKVGVTHYFSYLKAKEELGYVPFKSSKEGMAATISYWQERKRRSLDGPTMFTWIAVT 388
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ ALFA +LPDIGPVP LR I LF F+++ +++ F +AV HV+EG++AW LAK+V
Sbjct: 389 IGMSALFAAGWLPDIGPVPFLRAIHLFFFRTITIVKAVFIVAVVLHVAEGIYAWFLAKRV 448
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DP NA GWF QT ALG FS+R LLKRA++
Sbjct: 449 DPGNAMGWFLQTSALGFFSMRFLLKRAKE 477
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297826819|ref|XP_002881292.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein [Arabidopsis lyrata subsp. lyrata] gi|297327131|gb|EFH57551.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/388 (72%), Positives = 333/388 (85%), Gaps = 1/388 (0%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEMLQFGR DEVNINGTC+V+EA + I RLVYVSTYNVVFGGKEI+NGNE LPYF
Sbjct: 90 MSGKEMLQFGRCDEVNINGTCNVLEAAFKHEITRLVYVSTYNVVFGGKEILNGNEGLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+D+HVD+YGRSKS+AEQLVLKSNGRPFK N K +YTCA+RPAAIYGPGE+RHLPRIV+
Sbjct: 150 PLDDHVDAYGRSKSIAEQLVLKSNGRPFK-NGGKRMYTCAIRPAAIYGPGEDRHLPRIVT 208
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
LAKLGL FKIGEPSVKTDWIYV+NLVLA+ILASMGLLDDIPG+ G P+A+GQPYFVSDG
Sbjct: 209 LAKLGLALFKIGEPSVKTDWIYVENLVLAIILASMGLLDDIPGRDGHPVAAGQPYFVSDG 268
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+NTFEF+ PLLK+LDYDLPK ++VP AL LGK+F Y++LYPWL++ WLPQPL+LP
Sbjct: 269 SPVNTFEFLRPLLKSLDYDLPKFTISVPSALSLGKIFQGVYTLLYPWLSKSWLPQPLVLP 328
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP S +EGMAATISYWQ+RKR+SLDGPTI+ W+ +
Sbjct: 329 AEVYKVGVTHYFSYLKAKEELGYVPFKSSKEGMAATISYWQERKRRSLDGPTIFTWIAVI 388
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
+G+ ALFA +LPDIGPVP LR + LF F+++ +++ F ++V HV EG++A LAK+V
Sbjct: 389 LGMSALFAAGWLPDIGPVPFLRALHLFFFRTITVVKAVFIVSVILHVGEGIYALLLAKRV 448
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRAR 388
DP NA GWF QT ALG FS+R LLKRA+
Sbjct: 449 DPGNAMGWFLQTCALGFFSMRFLLKRAK 476
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356553309|ref|XP_003544999.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 272/389 (69%), Positives = 334/389 (85%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEMLQFGR+DEVNINGTCHVI+ACL GI+RLVY ST NVVFGG++I+NGNE+LPYF
Sbjct: 90 MSGKEMLQFGRIDEVNINGTCHVIDACLHLGIKRLVYCSTNNVVFGGQQIINGNETLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
PID HVD YGRSKS+AEQLVLK+N R K ++ LYTCAVRPAAIYGPGE+RHLPRIV+
Sbjct: 150 PIDHHVDPYGRSKSIAEQLVLKNNARTLKNDSGNRLYTCAVRPAAIYGPGEDRHLPRIVT 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
LAKLGL+ F+IG+ +VK+DW++VDNLVLALILASMGLLDD + RP+A+GQ YF+SDG
Sbjct: 210 LAKLGLLLFRIGDQTVKSDWLFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFISDG 269
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N+FEF+ PLL++LDY+LPK+ L V AL L ++ Y++LYPWLNRWWLPQP ILP
Sbjct: 270 SPVNSFEFLHPLLRSLDYELPKTSLPVDRALVLSRICWAVYTILYPWLNRWWLPQPFILP 329
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
+EV+KVGVTHYFS LKAK+E+ Y P+V+ REGMA TISYWQ+RKR +LDGPTIYAWLFC+
Sbjct: 330 SEVHKVGVTHYFSYLKAKEEIGYFPMVTSREGMALTISYWQERKRTTLDGPTIYAWLFCV 389
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ +LF A+LPDIG + +LR LF+F+SMW+ RL F +A +AH++E ++AW LAK++
Sbjct: 390 IGMISLFCGAFLPDIGIMSLLRATCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAKRM 449
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DPANA+GWFWQT ALG+FSLRLLLKRARK
Sbjct: 450 DPANARGWFWQTFALGMFSLRLLLKRARK 478
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564410|ref|XP_003550447.1| PREDICTED: short-chain dehydrogenase/reductase family 42E member 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 274/391 (70%), Positives = 334/391 (85%), Gaps = 2/391 (0%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEMLQFGRVDEVNINGTCHVI+ACL GI+RLVY ST NVVFGG++I+NGNE+LPYF
Sbjct: 101 MSGKEMLQFGRVDEVNINGTCHVIDACLYLGIKRLVYCSTCNVVFGGQQIINGNETLPYF 160
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNN--RKCLYTCAVRPAAIYGPGEERHLPRI 118
PID HVD YGRSKS+AEQLVLK+N R K ++ LYTCAVRPAAIYGPGE+RHLPRI
Sbjct: 161 PIDHHVDPYGRSKSIAEQLVLKNNARTLKSDSSGNHRLYTCAVRPAAIYGPGEDRHLPRI 220
Query: 119 VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVS 178
V++A+LGL+ F+IG+ +VK+DWI+VDNLVLALILASMGLLDD + RP+A+GQ YF+S
Sbjct: 221 VTMARLGLLLFRIGDQTVKSDWIFVDNLVLALILASMGLLDDNLSKGKRPVAAGQAYFIS 280
Query: 179 DGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238
DG P+N+FEF+ PLL++L Y+LPK+ L V AL LG++ Y++LYPWLNRWWLPQP I
Sbjct: 281 DGSPVNSFEFLQPLLRSLGYELPKTSLPVERALVLGRICWAVYTILYPWLNRWWLPQPFI 340
Query: 239 LPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLF 298
LP+EV+KVGVTHYFS LKAK+E+ Y P+V+ REGMA TISYWQ+RKR +LDGPTIYAWLF
Sbjct: 341 LPSEVHKVGVTHYFSYLKAKEEIGYAPMVTSREGMALTISYWQERKRTTLDGPTIYAWLF 400
Query: 299 CLIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAK 358
C+IG+ +LF A+LPDIG + +LRT LF+F+SMW+ RL F +A +AH++E ++AW LAK
Sbjct: 401 CVIGMISLFCGAFLPDIGIMSLLRTTCLFVFRSMWVTRLVFLLATAAHIAEAIYAWYLAK 460
Query: 359 KVDPANAKGWFWQTLALGVFSLRLLLKRARK 389
+VDPANA+GWFWQT ALG FSLRLLLKRARK
Sbjct: 461 RVDPANARGWFWQTFALGFFSLRLLLKRARK 491
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388497514|gb|AFK36823.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 272/390 (69%), Positives = 327/390 (83%), Gaps = 1/390 (0%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGK MLQ RVD+VNI GTCHV++ACL GI+RLVY STYNVVF G+ IVNG ESLPYF
Sbjct: 90 MSGKGMLQLTRVDQVNITGTCHVLDACLHLGIKRLVYCSTYNVVFAGQRIVNGTESLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
PID HVD YGRSKS+AEQLVLK+N RPFK + CLYTCAVRPAAIYGPGE+RHLPRI++
Sbjct: 150 PIDHHVDPYGRSKSIAEQLVLKNNARPFKNDAGNCLYTCAVRPAAIYGPGEDRHLPRIIT 209
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ-KGRPIASGQPYFVSD 179
AKLGL+ F IG+ +VK+DW++V+NLVLALILASMGLLDD G+ K RPIA+GQ YF+SD
Sbjct: 210 TAKLGLLLFTIGDQTVKSDWVFVENLVLALILASMGLLDDSAGKGKQRPIAAGQAYFISD 269
Query: 180 GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239
G P+NTFEF+ PLL++L+Y+LPK+ LAV HAL LG++ Y++LYPWL+RWWLPQP IL
Sbjct: 270 GSPVNTFEFLQPLLRSLEYELPKTSLAVDHALVLGRICQGVYTILYPWLDRWWLPQPFIL 329
Query: 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFC 299
P+ V+KVGVTHYFS LKAK+E+ YVP+ S REGMA+TISYWQ RK +LDGPTIY WLFC
Sbjct: 330 PSAVHKVGVTHYFSYLKAKEEIGYVPMASSREGMASTISYWQQRKMITLDGPTIYTWLFC 389
Query: 300 LIGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKK 359
+IG+ +LF A+LPD+G V +LR LF+F+SMWM+RL F +A +AHV E ++AW LAK+
Sbjct: 390 VIGMISLFCAAFLPDVGIVFLLRATSLFVFRSMWMIRLVFILATAAHVFEAIYAWYLAKR 449
Query: 360 VDPANAKGWFWQTLALGVFSLRLLLKRARK 389
VD ANA+GWFWQT ALG FSLR LLKRARK
Sbjct: 450 VDHANARGWFWQTFALGYFSLRFLLKRARK 479
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 389 | ||||||
| TAIR|locus:2051063 | 480 | AT2G33630 [Arabidopsis thalian | 0.997 | 0.808 | 0.719 | 9.9e-158 | |
| UNIPROTKB|I3L900 | 390 | SDR42E1 "Uncharacterized prote | 0.640 | 0.638 | 0.509 | 5.5e-61 | |
| MGI|MGI:1921282 | 394 | Sdr42e1 "short chain dehydroge | 0.655 | 0.647 | 0.498 | 1.5e-60 | |
| UNIPROTKB|Q8WUS8 | 393 | SDR42E1 "Short-chain dehydroge | 0.776 | 0.768 | 0.452 | 6.4e-60 | |
| UNIPROTKB|J9NYA9 | 393 | SDR42E1 "Uncharacterized prote | 0.650 | 0.643 | 0.498 | 8.1e-60 | |
| UNIPROTKB|F1MDX4 | 398 | SDR42E1 "Short-chain dehydroge | 0.650 | 0.635 | 0.490 | 2.2e-59 | |
| UNIPROTKB|G3X7Y2 | 393 | SDR42E1 "Short-chain dehydroge | 0.650 | 0.643 | 0.490 | 2.2e-59 | |
| UNIPROTKB|Q32L94 | 393 | SDR42E1 "Short-chain dehydroge | 0.650 | 0.643 | 0.490 | 2.2e-59 | |
| ZFIN|ZDB-GENE-051120-63 | 400 | sdr42e1 "short chain dehydroge | 0.776 | 0.755 | 0.421 | 1.9e-58 | |
| UNIPROTKB|E1C6D8 | 391 | SDR42E1 "Uncharacterized prote | 0.655 | 0.652 | 0.483 | 5.1e-58 |
| TAIR|locus:2051063 AT2G33630 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1537 (546.1 bits), Expect = 9.9e-158, P = 9.9e-158
Identities = 280/389 (71%), Positives = 337/389 (86%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSGKEML+FGR DEVNINGTC+V+EA + I R+VYVSTYNVVFGGKEI+NGNE LPYF
Sbjct: 90 MSGKEMLRFGRCDEVNINGTCNVLEAAFKHEITRIVYVSTYNVVFGGKEILNGNEGLPYF 149
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+D+HVD+Y R+KS+AEQLVLKSNGRPFK N K +YTCA+RPAAIYGPGE+RHLPRIV+
Sbjct: 150 PLDDHVDAYSRTKSIAEQLVLKSNGRPFK-NGGKRMYTCAIRPAAIYGPGEDRHLPRIVT 208
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
L KLGL FKIGEPSVK+DWIYV+NLVLA+ILASMGLLDDIPG++G+P+A+GQPYFVSDG
Sbjct: 209 LTKLGLALFKIGEPSVKSDWIYVENLVLAIILASMGLLDDIPGREGQPVAAGQPYFVSDG 268
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
+P+NTFEF+ PLLK+LDYDLPK ++VP AL LGK+F FY+VLYPWL++ WLPQPL+LP
Sbjct: 269 YPVNTFEFLRPLLKSLDYDLPKCTISVPFALSLGKIFQGFYTVLYPWLSKSWLPQPLVLP 328
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFCL 300
AEVYKVGVTHYFS LKAK+EL YVP S +EGMAATISYWQ+RKR+SLDGPT++ W+
Sbjct: 329 AEVYKVGVTHYFSYLKAKEELGYVPFKSSKEGMAATISYWQERKRRSLDGPTMFTWIAVT 388
Query: 301 IGLPALFATAYLPDIGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV 360
IG+ ALFA +LPDIGPVP LR I LF F+++ +++ F +AV HV+EG++AW LAK+V
Sbjct: 389 IGMSALFAAGWLPDIGPVPFLRAIHLFFFRTITIVKAVFIVAVVLHVAEGIYAWFLAKRV 448
Query: 361 DPANAKGWFWQTLALGVFSLRLLLKRARK 389
DP NA GWF QT ALG FS+R LLKRA++
Sbjct: 449 DPGNAMGWFLQTSALGFFSMRFLLKRAKE 477
|
|
| UNIPROTKB|I3L900 SDR42E1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 134/263 (50%), Positives = 171/263 (65%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L R+++VN+ GT +V++AC G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRSRIEDVNVGGTDNVLQACRSRGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KSVAE+ VL++NG+ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSVAEKKVLEANGKALAX-----LRTCALRPAGIYGPGEQRHLPRIVS 198
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L D KG +ASGQPYF+SDG
Sbjct: 199 YLEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASEALKAD----KGH-VASGQPYFISDG 253
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P L +P F F+F + Y L R + QP +
Sbjct: 254 RPVNNFEFFRPLVEGLGYKFPSVRLPLPLIYF----FAFLTEMAYFLLGRLYNFQPFLTR 309
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK VTHYFSL KAK EL Y
Sbjct: 310 TEVYKTAVTHYFSLEKAKKELGY 332
|
|
| MGI|MGI:1921282 Sdr42e1 "short chain dehydrogenase/reductase family 42E, member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 132/265 (49%), Positives = 174/265 (65%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L +++EVN+ GT +++ ACLE G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 85 MSGREQLNKTQIEEVNVGGTENILRACLERGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 144
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL++NG FK+ + L TCA+RPA IYG GE+RHLPRIVS
Sbjct: 145 PLHLHPDHYSRTKSIAEKKVLEANGLAFKQGDG-ILRTCAIRPAGIYGAGEQRHLPRIVS 203
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNL A ILAS L D KG +ASGQPYF+SDG
Sbjct: 204 YIERGLFRFVYGDPQSLVEFVHVDNLAKAHILASEALKAD----KGH-VASGQPYFISDG 258
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L P L +F + + + R + QP +
Sbjct: 259 RPVNNFEFFRPLVEGLGYTFPSTRL--PLTLIY--CLAFLVEMTHFIVGRLYNFQPFLTR 314
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVP 265
EVYK GVTHYFSL KAK EL + P
Sbjct: 315 TEVYKTGVTHYFSLEKAKKELGFEP 339
|
|
| UNIPROTKB|Q8WUS8 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 142/314 (45%), Positives = 188/314 (59%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L + EVN+ GT ++++ C + RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRNLIKEVNVRGTDNILQVCQRRRVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AEQ VL++N P + + L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEQKVLEANATPLDRGDG-VLRTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L D KG IASGQPYF+SDG
Sbjct: 203 YIEKGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALRAD----KGH-IASGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L P L L F+F +++ L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYTFPSTRL--P--LTLVYCFAFLTEMVHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY-VPIVSPREGMAATISYWQDRKRKSLDGPTIYAWLFC 299
EVYK GVTHYFSL KAK EL Y +E + ++ R S D + W
Sbjct: 314 TEVYKTGVTHYFSLEKAKKELGYKAQPFDLQEAVEWFKAHGHGRSSGSRDSEC-FVWDGL 372
Query: 300 LIGLPALFATAYLP 313
L+ L + +LP
Sbjct: 373 LVFLLIIAVLMWLP 386
|
|
| UNIPROTKB|J9NYA9 SDR42E1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 131/263 (49%), Positives = 173/263 (65%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++EVN+ GT ++++ C G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRSLIEEVNVGGTDNILQVCRRRGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL+++G +++ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEKKVLEASGTTLLRSDG-VLRTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L D KG IASGQPYF+SDG
Sbjct: 203 YIERGLFKFVYGDPRSLVEFVHVDNLVQAHILASEALKAD----KGH-IASGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + VP L F+F +++ L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYTFPS--VRVPLTLIY--CFAFLTEMVHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KAK EL Y
Sbjct: 314 TEVYKTGVTHYFSLDKAKKELGY 336
|
|
| UNIPROTKB|F1MDX4 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 129/263 (49%), Positives = 170/263 (64%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++E+N+ GT ++++AC G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRSLIEEINVGGTDNILQACRRRGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL +NG ++ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEKKVLSANGTALERGGG-VLSTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L KG IA+GQPYF+SDG
Sbjct: 203 YIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASEAL----KANKGH-IAAGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L P L F+F + + L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYKFPSTRL--PLTLIY--CFAFLTEMTHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KA+ EL Y
Sbjct: 314 TEVYKTGVTHYFSLEKARKELGY 336
|
|
| UNIPROTKB|G3X7Y2 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 129/263 (49%), Positives = 170/263 (64%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++E+N+ GT ++++AC G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRSLIEEINVGGTDNILQACRRRGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL +NG ++ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEKKVLSANGTALERGGG-VLSTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L KG IA+GQPYF+SDG
Sbjct: 203 YIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASEAL----KANKGH-IAAGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L P L F+F + + L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYKFPSTRL--PLTLIY--CFAFLTEMTHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KA+ EL Y
Sbjct: 314 TEVYKTGVTHYFSLEKARKELGY 336
|
|
| UNIPROTKB|Q32L94 SDR42E1 "Short-chain dehydrogenase/reductase family 42E member 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 129/263 (49%), Positives = 170/263 (64%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++E+N+ GT ++++AC G+ RLVY ST+NV+FGG+ I NG+ESLPY
Sbjct: 84 MSGREQLNRSLIEEINVGGTDNILQACRRRGVPRLVYTSTFNVIFGGQVIRNGDESLPYL 143
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE+ VL +NG ++ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 144 PLHLHPDHYSRTKSIAEKKVLSANGTALERGGG-VLSTCALRPAGIYGPGEQRHLPRIVS 202
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILAS L KG IA+GQPYF+SDG
Sbjct: 203 YIEKGLFRFVYGDPKSLVEFVHVDNLVQAHILASEAL----KANKGH-IAAGQPYFISDG 257
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P + L P L F+F + + L R + QP +
Sbjct: 258 RPVNNFEFFRPLVEGLGYKFPSTRL--PLTLIY--CFAFLTEMTHFILGRLYNFQPFLTR 313
Query: 241 AEVYKVGVTHYFSLLKAKDELCY 263
EVYK GVTHYFSL KA+ EL Y
Sbjct: 314 TEVYKTGVTHYFSLEKARKELGY 336
|
|
| ZFIN|ZDB-GENE-051120-63 sdr42e1 "short chain dehydrogenase/reductase family 42E, member 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 135/320 (42%), Positives = 196/320 (61%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++EVN+ GT +++ AC+ + RL+Y ST+NVVFGG+EI NG+ESLPY
Sbjct: 94 MSGREQLNRKLIEEVNVKGTENILRACVAHSVPRLIYTSTFNVVFGGQEIKNGDESLPYL 153
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE VLK+N N+ L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 154 PLHLHPDHYSRTKSIAEMQVLKANNLALS-NSTGVLRTCALRPAGIYGPGEQRHLPRIVS 212
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ G+ F G+P ++++VDNLV A +LA+ L + Q+ R A+GQ YF+SDG
Sbjct: 213 YIENGIFRFVYGDPDSLVEFVHVDNLVSAHLLAADALTEK---QQCR--AAGQAYFISDG 267
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P L + F F+F +++ + R + QPL+
Sbjct: 268 RPVNNFEFFRPLVEGLGYSFPTLRLPISMIYF----FAFLTEMVHFVVGRIYNFQPLLTR 323
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR---KRKSLDG-PTIYAW 296
EVYK GVTHYFS+ KA++EL Y P + E + + ++Q R K++S +
Sbjct: 324 TEVYKTGVTHYFSMRKAREELGYEPKLYDLEDV---VQWFQARGHGKKRSRSSIRKLILD 380
Query: 297 LFCLIGLPALFATAYLPDIG 316
+F ++ A+ + LP +G
Sbjct: 381 VFVVVAFVAVLLSC-LPVVG 399
|
|
| UNIPROTKB|E1C6D8 SDR42E1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 128/265 (48%), Positives = 169/265 (63%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L +++VN+ GT +VI+AC G+ LVY STYNV+FGG+ I NG+ESLPY
Sbjct: 82 MSGREQLNRKLIEDVNVKGTENVIQACKSTGVSSLVYTSTYNVIFGGQIIENGDESLPYL 141
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+ H D Y R+KS+AE VLK+NG N + L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 142 PLHLHPDHYSRTKSLAEMKVLKANGTELG-NGKGVLRTCALRPAGIYGPGEQRHLPRIVS 200
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILA + + K + IA+GQ YF+SDG
Sbjct: 201 YIERGLFKFVYGDPLSLVEFVHVDNLVQAHILA----FEALKANK-KHIAAGQAYFISDG 255
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P L + F F+F V++ + + QPL+
Sbjct: 256 RPVNNFEFFRPLVEGLGYKFPTCRLPLSLVYF----FAFLTEVVHFLVGHVYNFQPLLTR 311
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVP 265
EVYK GVTHYFS+ KA+ EL Y P
Sbjct: 312 TEVYKTGVTHYFSMEKARKELGYEP 336
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8WUS8 | D42E1_HUMAN | 1, ., 1, ., 1, ., - | 0.5019 | 0.6503 | 0.6437 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 389 | |||
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 3e-92 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 1e-72 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 4e-64 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 1e-58 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 5e-35 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-20 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-18 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 8e-16 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-15 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 3e-15 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 2e-10 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 5e-09 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 7e-09 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 9e-09 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 6e-08 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 7e-08 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 1e-07 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 4e-07 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 3e-06 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 1e-05 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 3e-05 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 4e-05 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 5e-05 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 6e-05 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 1e-04 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 1e-04 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 1e-04 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 2e-04 | |
| TIGR01214 | 287 | TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | 3e-04 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 3e-04 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 5e-04 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 6e-04 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 0.001 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 0.002 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 280 bits (717), Expect = 3e-92
Identities = 133/265 (50%), Positives = 174/265 (65%), Gaps = 10/265 (3%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF 60
MSG+E L ++E+N+ GT ++I+ C+ + RL+Y ST+NV+FGG+ I NG+ESLPY
Sbjct: 73 MSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYTSTFNVIFGGQPIRNGDESLPYL 132
Query: 61 PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
P+D HVD Y R+KS+AEQLVLK+N P NN L TCA+RPA IYGPGE+RHLPRIVS
Sbjct: 133 PLDLHVDHYSRTKSIAEQLVLKANNMPL-PNNGGVLRTCALRPAGIYGPGEQRHLPRIVS 191
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
+ GL F G+P ++++VDNLV A ILA+ L KG IASGQ YF+SDG
Sbjct: 192 YIEKGLFMFVYGDPKSLVEFVHVDNLVQAHILAAEALTTA----KGY-IASGQAYFISDG 246
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
P+N FEF PL++ L Y P L +P +L F+F +++ L QPL+
Sbjct: 247 RPVNNFEFFRPLVEGLGYSFP--SLRLPLSLVY--FFAFLTEMVHFALGPICNFQPLLTR 302
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVP 265
EVYK GVTHYFS+ KA+ EL Y P
Sbjct: 303 TEVYKTGVTHYFSIEKARAELGYEP 327
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 1e-72
Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 12/203 (5%)
Query: 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFG---GKEIVNGNESLPYFPI 62
+ +VN+ GT +V++AC++ G++ LVY S+ VV G+ IVNG+E+ PY
Sbjct: 82 KAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSMEVVGPNSYGQPIVNGDETTPYEST 141
Query: 63 DEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLA 122
H D Y SK++AE+LVLK+NG K R LYTCA+RPA I+G G+ P +V L
Sbjct: 142 --HQDPYPESKALAEKLVLKANGSTLKNGGR--LYTCALRPAGIFGEGDPFLFPFLVRLL 197
Query: 123 KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182
K GL F+ G+ +V +D +YV N+ A ILA+ L D K +GQ YF+SD P
Sbjct: 198 KNGLAKFRTGDKNVLSDRVYVGNVAWAHILAARALQD----PKKASSIAGQFYFISDDTP 253
Query: 183 IN-TFEFIGPLLKTLDYDLPKSW 204
N +F LLK L LP S
Sbjct: 254 HNSYDDFNRTLLKALGLRLPSSI 276
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 207 bits (529), Expect = 4e-64
Identities = 100/276 (36%), Positives = 146/276 (52%), Gaps = 37/276 (13%)
Query: 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
EVN+ GT +V++AC G+Q+ VY S+ +V+FGG+ I NG+E+LPY P D Y
Sbjct: 85 LYWEVNVGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQNIHNGDETLPYPP--LDSDMYA 142
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFK 130
+K++AE +VL++NGR L TCA+RPA I+GPG++ +P + A+ GLV F
Sbjct: 143 ETKAIAEIIVLEANGR-------DDLLTCALRPAGIFGPGDQGLVPILFEWAEKGLVKFV 195
Query: 131 IGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIG 190
G + D+ YV NL A ILA+ L+ SGQ YF++D P N FE +
Sbjct: 196 FGRGNNLVDFTYVHNLAHAHILAAAALVKGKT-------ISGQTYFITDAEPHNMFELLR 248
Query: 191 PLLKTLDY-DLPKSWLAVPHAL---FLGKVFSF---FYSVLYPWLNRWWLPQPLILPAEV 243
P+ K L + PK L+ P A L ++ SF Y V P+ R
Sbjct: 249 PVWKALGFGSRPKIRLSGPLAYCAALLSELVSFMLGPYFVFSPFYVR------------- 295
Query: 244 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISY 279
+ YFS+ KA+ +L Y P S EG+ T+++
Sbjct: 296 -ALVTPMYFSIAKAQKDLGYAPRYSNEEGLIETLNW 330
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 1e-58
Identities = 98/266 (36%), Positives = 154/266 (57%), Gaps = 21/266 (7%)
Query: 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRS 72
+VN+ GT +VIEAC + G+++LVY S+ +VVF G++I+NG+ESLPY D+H D+Y +
Sbjct: 87 YKVNVQGTRNVIEACRKCGVKKLVYTSSASVVFNGQDIINGDESLPY--PDKHQDAYNET 144
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIG 132
K++AE+LVLK+N L TCA+RPA I+GPG+ + +P ++ AK G F+IG
Sbjct: 145 KALAEKLVLKANDPESG------LLTCALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIG 198
Query: 133 EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL 192
+ + D+ YV+N+ A ILA+ LL +G+ +F+++ PI ++F +
Sbjct: 199 DGNNLFDFTYVENVAHAHILAADALLS----SSHAETVAGEAFFITNDEPIYFWDFARAI 254
Query: 193 LKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 251
+ L Y+ P S L P AL+L + + VL +P P V + T Y
Sbjct: 255 WEGLGYERPPSIKLPRPVALYLASLLEWTCKVLG--------KEPTFTPFRVALLCSTRY 306
Query: 252 FSLLKAKDELCYVPIVSPREGMAATI 277
F++ KAK L Y P+V+ EG+ T+
Sbjct: 307 FNIEKAKKRLGYTPVVTLEEGIERTL 332
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 5e-35
Identities = 93/276 (33%), Positives = 125/276 (45%), Gaps = 28/276 (10%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVV---FGGKEIVNGNESLPYFPIDEHVDSYG 70
EVN+NGT V+EAC++ ++RLVY S+ V F G+ I NG E PY D Y
Sbjct: 96 EVNVNGTQAVLEACVQNNVKRLVYTSSIEVAGPNFKGRPIFNGVEDTPY--EDTSTPPYA 153
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFK 130
SK +AE +VL +NG P K L TCA+RP IYG G L F
Sbjct: 154 SSKLLAENIVLNANGAPLK--QGGYLVTCALRPMYIYGEGSHFLTEIFDFLLTNNGWLFP 211
Query: 131 IGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE-FI 189
+ S +YV N+ A ILA+ L Q GQ YF+SD P N++ F
Sbjct: 212 RIKGSGVNPLVYVGNVAWAHILAAKAL------QVPDKAIRGQFYFISDDTPHNSYSDFN 265
Query: 190 GPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL---ILPAEVYKV 246
LLK L L SW VP L +F + L ++ +L +P + V
Sbjct: 266 YELLKELGLRLKTSWWYVPLFLL------YFLAFLLEIVS--FLLRPYVKYRPRYNRHAV 317
Query: 247 GVTH---YFSLLKAKDELCYVPIVSPREGMAATISY 279
+T+ FS LKA+ Y+P+ S E T +
Sbjct: 318 ALTNSMFTFSYLKAQRHFGYMPLFSWEESKERTAKW 353
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 3e-20
Identities = 63/280 (22%), Positives = 104/280 (37%), Gaps = 62/280 (22%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+VN++GT +++EA G++R V+ S+ +VV+G + +E L ++ YG SK
Sbjct: 90 DVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGP---PRPLNPYGVSK 146
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS------LAKLGLV 127
AEQL+ L +RP +YGPG++ L V L K +
Sbjct: 147 LAAEQLLRAY-------ARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPI 199
Query: 128 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG-FPINTF 186
G+ S D++YVD++ AL+LA G + + G I
Sbjct: 200 IVIGGDGSQTRDFVYVDDVADALLLALEN-------------PDGGVFNIGSGTAEITVR 246
Query: 187 EFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246
E + + + P V P R L +
Sbjct: 247 ELAEAVAEAVGSKAP-------------------LIVYIPLGRRGDLREGK--------- 278
Query: 247 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286
+ KA+ L + P VS EG+A T+ + +
Sbjct: 279 ----LLDISKARAALGWEPKVSLEEGLADTLEWLLKKLEL 314
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 2e-18
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
E N+ GT +++EA + G++R VY S+ V+G E + E P P+ YG SK
Sbjct: 55 ETNVVGTLNLLEAARKAGVKRFVYASS-ASVYGSPEGLPEEEETPPRPL----SPYGVSK 109
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH----LPRIVSLAKLGLVPF 129
AE L+ L +R A +YGPG+ + + A G
Sbjct: 110 LAAEHLLRSY-------GESYGLPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLT 162
Query: 130 KIGEPSVKTDWIYVDNLVLALILA 153
G + D+I+VD++V A++ A
Sbjct: 163 VFGGGNQTRDFIHVDDVVRAILHA 186
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 8e-16
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
N+ GT ++EA G++R V+ S+ V+G E P P+ Y +K
Sbjct: 88 RANVLGTLRLLEAARRAGVKRFVFASSSE-VYGDVADPPITEDTPLGPLSP----YAAAK 142
Query: 74 SVAEQLVL---KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-----LPRIVSLAKLG 125
AE+LV ++ G +R +YGPG +P ++ G
Sbjct: 143 LAAERLVEAYARAYGLRA----------VILRLFNVYGPGNPDPFVTHVIPALIRRILEG 192
Query: 126 LVPFKIGEPSVKTDWIYVDNLVLALILA 153
+G+ + + D++YVD++ A++LA
Sbjct: 193 KPILLLGDGTQRRDFLYVDDVARAILLA 220
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 38/272 (13%)
Query: 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
+ N+ GT +V++A LE G++R+V+ S+ GG +E+ P+ D Y
Sbjct: 82 ELYRTNVEGTRNVLDAALEAGVRRVVHTSSIA-ALGGPPDGRIDETTPWNERPFPND-YY 139
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP--RIVSLAKLGLVP 128
RSK +AE VL++ + L V P+A++GPG+E V G +P
Sbjct: 140 RSKLLAELEVLEA--------AAEGLDVVIVNPSAVFGPGDEGPTSTGLDVLDYLNGKLP 191
Query: 129 FKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEF 188
T ++ V ++ I A +KGR G+ Y + +F+
Sbjct: 192 AYPPG---GTSFVDVRDVAEGHIAAM---------EKGRR---GERYILGG--ENLSFKQ 234
Query: 189 IGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV 248
+ L + P P +L K + S L L PL+ P +
Sbjct: 235 LFETLAEITGVKPPRRTIPP---WLLKAVAAL-SELKARLTG---KPPLLTPRTARVLRR 287
Query: 249 THYFSLLKAKDELCYVPIVSPREGMAATISYW 280
+ +S KA+ EL Y P E + T+ W
Sbjct: 288 NYLYSSDKARRELGYSP-RPLEEALRDTL-AW 317
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 3e-15
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 38/212 (17%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEH-----VDS 68
+VN T + A G++R V++S+ V NG ++ P DE D+
Sbjct: 84 KVNTELTRRLARAAARQGVKRFVFLSSVKV--------NGEGTVGA-PFDETDPPAPQDA 134
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP 128
YGRSK AE+ +L+ + + +RP +YGPG + R++ L GL P
Sbjct: 135 YGRSKLEAERALLELG----ASDGME---VVILRPPMVYGPGVRGNFARLMRLIDRGL-P 186
Query: 129 FKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEF 188
G + + +DNLV A+ L + P A+ + VSDG P++T E
Sbjct: 187 LPPGAVKNRRSLVSLDNLVDAIYL----CISL-------PKAANGTFLVSDGPPVSTAEL 235
Query: 189 IGPL-----LKTLDYDLPKSWLAVPHALFLGK 215
+ + T +P L L +
Sbjct: 236 VDEIRRALGKPTRLLPVPAGLLRFAAKLLGKR 267
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.4 bits (150), Expect = 2e-10
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 33/190 (17%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGG-KEIVNGNESLPYFPIDEHVDSYGRS 72
N+ GT ++EA ++G++R V++ST + V+G + E+ P P Y S
Sbjct: 99 RTNVLGTYTLLEAARKYGVKRFVHIST-DEVYGDLLDDGEFTETSPLAP----TSPYSAS 153
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFK 130
K+ A+ LV ++ R + L R + YGP + E+ +P + A G P
Sbjct: 154 KAAADLLV-RAYHRTYG------LPVVITRCSNNYGPYQFPEKLIPLFILNALDGK-PLP 205
Query: 131 I-GEPSVKTDWIYVDNLVLAL--ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 187
I G+ DW+YV++ A+ +L +KGR G+ Y + G + E
Sbjct: 206 IYGDGLNVRDWLYVEDHARAIELVL-----------EKGRV---GEIYNIGGGNELTNLE 251
Query: 188 FIGPLLKTLD 197
+ +L+ L
Sbjct: 252 LVKLILELLG 261
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 5e-09
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 31/193 (16%)
Query: 9 FGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS 68
NI+GT HV+E IQR YVST V + + E+ + +
Sbjct: 93 NEDAWRTNIDGTEHVLELAARLDIQRFHYVSTAYVAGNREGNI--RETELNPGQNFK-NP 149
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRI-------VSL 121
Y +SK+ AEQLV + + + RP+ + G + + +I L
Sbjct: 150 YEQSKAEAEQLVRAAATQ---------IPLTVYRPSIVVGDSKTGRIEKIDGLYELLNLL 200
Query: 122 AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGF 181
AKLG G + + + VD + A++ S +P A+GQ + ++D
Sbjct: 201 AKLGRWLPMPGNKGARLNLVPVDYVADAIVYLS-----------KKPEANGQIFHLTDPT 249
Query: 182 PINTFEFIGPLLK 194
P T I L K
Sbjct: 250 PQ-TLREIADLFK 261
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 7e-09
Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE------HVDS 68
N+ GT V+ + +VST G+ E DE +
Sbjct: 108 TNVLGTREVLRLAKQMKKLPFHHVST--AYVNGERGGLLEEKPYKLDEDEPALLGGLPNG 165
Query: 69 YGRSKSVAEQLVLK-SNGRPFKKNNRKCLYTCAVRPAAIYG---PGE---ERHLPR-IVS 120
Y +SK +AEQLV + + G P RP+ I G G + PR ++
Sbjct: 166 YTQSKWLAEQLVREAAGGLP----------VVIYRPSIITGESRTGWINGDDFGPRGLLG 215
Query: 121 LAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150
A LG++P +G+P + D + VD + A+
Sbjct: 216 GAGLGVLPDILGDPDARLDLVPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 9e-09
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
E N+ GT +V+EA +R+V+ ST V+G + V +E P I++ Y
Sbjct: 90 SYVETNVFGTLNVLEAACVLYRKRVVHTSTSE-VYGTAQDVPIDEDHPLLYINKPRSPYS 148
Query: 71 RSKSVAEQLVL---KSNGRPFKKNNRKCLYTCAVRPAAIYGPG--EERHLPRIVSLAKLG 125
SK A++L +S G P +RP YGP +P I+S +G
Sbjct: 149 ASKQGADRLAYSYGRSFGLPVT----------IIRPFNTYGPRQSARAVIPTIISQRAIG 198
Query: 126 LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI--ASGQPYFVSD 179
+G+ S D+ +V + I D G I SG+ + +
Sbjct: 199 QRLINLGDGSPTRDFNFVKDTARGFIDI-----LDAIEAVGEIINNGSGEEISIGN 249
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 40/157 (25%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE----HVDS- 68
EVN+ GT +++EA + G++R VY S+ +V G+ PY P DE + S
Sbjct: 91 EVNVLGTLNLLEAARKAGVKRFVYASSSSVY--------GDP--PYLPKDEDHPPNPLSP 140
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGPGEERH------LPRIV 119
Y SK E + F + LY T ++R +YGP ++ + +P +
Sbjct: 141 YAVSKYAGELYC-----QVFAR-----LYGLPTVSLRYFNVYGPRQDPNGGYAAVIPIFI 190
Query: 120 SLAKLGLVPFKI---GEPSVKTDWIYVDNLVLALILA 153
A G P I GE + D+ YV+++V A +LA
Sbjct: 191 ERALKGE-PPTIYGDGEQT--RDFTYVEDVVEANLLA 224
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 7e-08
Identities = 53/233 (22%), Positives = 83/233 (35%), Gaps = 66/233 (28%)
Query: 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS-YGR 71
++V++ G + +A E G++RL+++S D + S Y R
Sbjct: 88 EDVHVEGPERLAKAAKEAGVERLIHISALG-------------------ADANSPSKYLR 128
Query: 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCA-VRPAAIYGPGEERHLPRIVSLAKLGLVPFK 130
SK+ E+ V R+ VRP+ ++G E+R L R L P
Sbjct: 129 SKAEGEEAV------------REAFPEATIVRPSVVFGR-EDRFLNRFAKLLAFLPFPPL 175
Query: 131 IGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIG 190
IG K +YV ++ A+ A L D P G+ T+E +G
Sbjct: 176 IGGGQTKFQPVYVGDVAEAIARA----LKD-------PETEGK-----------TYELVG 213
Query: 191 PLLKTLD------YDL---PKSWLAVPHAL-FLGKVFSFFYSVLYPWLNRWWL 233
P + TL L + L +P L L + P L R L
Sbjct: 214 PKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKLLLLLPEPPLTRDQL 266
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ N+ T ++EAC GI ++++ S+ V+G E + +ES P PI SYG SK
Sbjct: 87 QTNVAPTVQLLEACAAAGIGKIIFASSGGTVYGVPEQLPISESDPTLPI----SSYGISK 142
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER---------HLPRIVSLAKL 124
E+ + R ++ L +R + YGPG+ L +I+ +
Sbjct: 143 LAIEKYL-----RLYQY--LYGLDYTVLRISNPYGPGQRPDGKQGVIPIALNKILRGEPI 195
Query: 125 GLVPFKIGEPSVKTDWIYVDNLVLALILAS 154
+ G+ D+IY+D+LV AL+
Sbjct: 196 EI----WGDGESIRDYIYIDDLVEALMALL 221
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 4e-07
Identities = 51/166 (30%), Positives = 72/166 (43%), Gaps = 38/166 (22%)
Query: 33 QRLVYVSTYNVVFGGK--EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKK 90
QR++Y+S+ V +G + E V+ E+ P P E GR+ AEQ +L +P
Sbjct: 94 QRVIYLSSTGV-YGDQQGEWVD--ETSPPNPSTES----GRALLEAEQALLALGSKP--- 143
Query: 91 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150
T +R A IYGPG RH + LA+ P + T+ I+VD+LV AL
Sbjct: 144 -------TTILRLAGIYGPG--RH--PLRRLAQGTGRP---PAGNAPTNRIHVDDLVGAL 189
Query: 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL 196
A Q+ P G Y V D P+ EF + L
Sbjct: 190 AFA---------LQRPAP---GPVYNVVDDLPVTRGEFYQAAAELL 223
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ N+ GT +V++A + G++++V+ ST + V+G + V +E P Y SK
Sbjct: 95 DTNVTGTLNVLQAARDLGVEKVVHTST-SEVYGTAQYVPIDEKHPLQG----QSPYSASK 149
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKI 131
A+QL L S R F +RP YGP + +P I++ G K+
Sbjct: 150 IGADQLAL-SFYRSFN------TPVTIIRPFNTYGPRQSARAVIPTIITQIASGKRRIKL 202
Query: 132 GEPSVKTDWIYVDNLVLALI 151
G S D+ YV + V I
Sbjct: 203 GSLSPTRDFNYVTDTVRGFI 222
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEH--VDSYGRS 72
VN G ++ EAC G L+++ST V F +G + PY D ++ YGR+
Sbjct: 75 VNALGPGNLAEACAARGA-PLIHISTDYV-F------DGAKGGPYREDDPTGPLNVYGRT 126
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK 123
K EQ VL +N R +R A +YG + ++ LA
Sbjct: 127 KLAGEQAVLAANPR-----------HLILRTAWVYGEYGNNFVKTMLRLAA 166
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEH--VDSYGRS 72
VN G ++ A E G RLV++ST VF +G + PY D ++ YGRS
Sbjct: 76 VNATGAENLARAAAEVGA-RLVHISTD-YVF------DGEKGGPYKETDTPNPLNVYGRS 127
Query: 73 KSVAEQLVLKSNGR 86
K E+ V + R
Sbjct: 128 KLAGEEAVRAAGPR 141
|
Length = 281 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 42/170 (24%)
Query: 32 IQRLVYVSTYNVVFGGKEIVNGNESLP----YFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87
+++ +++S+ +V K ES P YGR K AE +++++ P
Sbjct: 90 VKQYIFISSASVY--LKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFP 147
Query: 88 FKKNNRKCLYTCAVRPAAIYGPG-----EERHLPRIVSLAKLG---LVPFKIGEPSVKTD 139
YT VRP IYGPG R+ G LVP G+
Sbjct: 148 ---------YT-IVRPPYIYGPGDYTGRLAYFFDRL----ARGRPILVP---GDGHSLVQ 190
Query: 140 WIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFI 189
+I+V +L AL+ A+ G P A G + ++ + E +
Sbjct: 191 FIHVKDLARALLGAA-----------GNPKAIGGIFNITGDEAVTWDELL 229
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 16 NINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV 75
N+ GT ++IEA L+ G+++ ++ ST V+G +E+ P PI + YGRSK +
Sbjct: 94 NVVGTLNLIEAMLQTGVKKFIFSST-AAVYGEPTTSPISETSPLAPI----NPYGRSKLM 148
Query: 76 AEQ 78
+E+
Sbjct: 149 SEE 151
|
Length = 329 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 6e-05
Identities = 20/64 (31%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 16 NINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV 75
N+ GT +++EA + G+++ ++ S+ V+G + +E P PI + YGRSK +
Sbjct: 97 NVVGTLNLLEAMQQAGVKKFIFSSS-AAVYGEPSSIPISEDSPLGPI----NPYGRSKLM 151
Query: 76 AEQL 79
+EQ+
Sbjct: 152 SEQI 155
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST-YNVVFGGKEIVNGNESLPYFPIDEH--VDSYGR 71
VN+ ++ A E G RL+++ST Y VF GK+ PY D ++ YG+
Sbjct: 81 VNVLAPENLARAAKEVGA-RLIHISTDY--VFDGKKG-------PYKEEDAPNPLNVYGK 130
Query: 72 SKSVAEQLVLKSNGR 86
SK + E VL +N R
Sbjct: 131 SKLLGEVAVLNANPR 145
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 16/151 (10%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVV-FGGKEIVNGNESLPYFPIDEHVDSYGRS 72
+N++GT +V++AC G+ R+V S+ V E P E +Y R
Sbjct: 84 RINVDGTQNVLDACAAAGVPRVVVTSSVAVYGAHPDNPAPLTEDAPLRGSPEF--AYSRD 141
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIG 132
K+ EQL+ + R L +RPA I GPG G
Sbjct: 142 KAEVEQLLAEFRRR------HPELNVTVLRPATILGPGTR----NTTRDFLSPRRLPVPG 191
Query: 133 EPSVKTDWIYVDNLVLALILASMGLLDDIPG 163
+++ D++ AL+LA + G
Sbjct: 192 GFDPPFQFLHEDDVARALVLA---VRAGATG 219
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 37/198 (18%)
Query: 14 EVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFG--GKEIVNGNESLPYFPIDEHVDS-Y 69
+ N+ GT ++EA ++ + R ++ST + V+G G + E+ PY P S Y
Sbjct: 99 QTNVVGTYTLLEAARKYWGKFRFHHIST-DEVYGDLGLDDDAFTETTPYNP-----SSPY 152
Query: 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP--GEERHLPRIVSLAKLGLV 127
SK+ ++ LV ++ R + L R + YGP E+ +P ++ A LG
Sbjct: 153 SASKAASDLLV-RAYVRTYG------LPATITRCSNNYGPYQFPEKLIPLMIINALLGK- 204
Query: 128 PFKI-GEPSVKTDWIYVDNLVLAL--ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184
P + G+ DW+YV++ A+ +L KG+ G+ Y + G
Sbjct: 205 PLPVYGDGLQIRDWLYVEDHCRAIDLVL-----------TKGKI---GETYNIGGGNERT 250
Query: 185 TFEFIGPLLKTLDYDLPK 202
E + + + L D P
Sbjct: 251 NLEVVKTICELLGKDKPD 268
|
Length = 340 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 2e-04
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 14 EVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVNGN---ESLPYFPIDEHVDSY 69
E N+ GT ++EA ++ + R ++ST + V+G ++ G+ E+ P P Y
Sbjct: 98 ETNVVGTYTLLEAVRKYWHEFRFHHIST-DEVYG--DLEKGDAFTETTPLAP----SSPY 150
Query: 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLV 127
SK+ ++ LV + R + L R + YGP + E+ +P +++ A G
Sbjct: 151 SASKAASDHLVR-AYHRTYG------LPALITRCSNNYGPYQFPEKLIPLMITNALAGKP 203
Query: 128 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 187
G+ DW+YV++ A+ L +L+ KGR G+ Y + G E
Sbjct: 204 LPVYGDGQQVRDWLYVEDHCRAIYL----VLE-----KGRV---GETYNIGGGNERTNLE 251
Query: 188 FIGPLLKTLDYD 199
+ +L+ L D
Sbjct: 252 VVETILELLGKD 263
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 10/74 (13%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEH--VDSYGRS 72
VN ++ A G RLV++ST + VF G+ PY D ++ YG+S
Sbjct: 76 VNALAPQNLARAAARHGA-RLVHIST-DYVFDGEG------KRPYREDDATNPLNVYGQS 127
Query: 73 KSVAEQLVLKSNGR 86
K EQ V +
Sbjct: 128 KLAGEQAVRAAGPN 141
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST---YNVVFGGKEIVNGNESLPYFPIDEHVDSYGR 71
N+ GT +++ ++ L +VST ++ ++ + Y +
Sbjct: 112 ANVLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPN-GYIQ 170
Query: 72 SKSVAEQLVLK--SNGRPFKKNNRKCLYTCAVRPAAIYG 108
SK VAE+L+ + + G P +RP I+G
Sbjct: 171 SKWVAEKLLREAANRGLP----------VAIIRPGNIFG 199
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ N+ GT +++EA G++ V+ S+ V+G E V E P P + YGR+K
Sbjct: 94 DNNVVGTLNLLEAMRAHGVKNFVFSSS-AAVYGEPETVPITEEAPLNPT----NPYGRTK 148
Query: 74 SVAEQL 79
+ EQ+
Sbjct: 149 LMVEQI 154
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 16 NINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV 75
N+ GT +++ A LE G++R+VY S+ + + +E+ P +D+ + Y RSK +
Sbjct: 89 NVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTP-SSLDDMIGHYKRSKFL 147
Query: 76 AEQLVLK 82
AEQ L+
Sbjct: 148 AEQAALE 154
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 32/120 (26%), Positives = 42/120 (35%), Gaps = 36/120 (30%)
Query: 14 EVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVNGNESLPY------------- 59
E N GT +V+EA + ++ ST N V+G LP
Sbjct: 98 ETNALGTLNVLEAARQHAPNAPFIFTST-NKVYGDLP-----NYLPLEELETRYELAPEG 151
Query: 60 ---------FPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPG 110
FP+D YG SK A+Q V + GR F L T R + GP
Sbjct: 152 WSPAGISESFPLDFSHSLYGASKGAADQYVQEY-GRIFG------LKTVVFRCGCLTGPR 204
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.002
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 21/95 (22%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
EV++ GT +V+EA E G++ +++S+ ++ E P P Y K
Sbjct: 81 EVDVEGTRNVLEAAKEAGVKHFIFISSLGAY---GDLHEETEPSPSSP-------YLAVK 130
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYG 108
+ E ++ +++ YT VRP IYG
Sbjct: 131 AKTEAVLREASLP----------YT-IVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 389 | |||
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.98 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.97 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.96 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.96 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.96 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.96 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.96 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.96 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.96 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.95 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.95 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.94 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.94 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.94 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.94 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.93 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.93 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.93 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.93 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.92 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.92 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.92 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.91 | |
| PF14934 | 91 | DUF4499: Domain of unknown function (DUF4499) | 99.91 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.91 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.9 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.9 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.89 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.89 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.88 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.87 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.86 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.86 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.85 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.84 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.83 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.82 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.8 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.78 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.76 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.76 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.76 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.74 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.7 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.68 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.62 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.62 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.6 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.6 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.56 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.51 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.33 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.31 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.26 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.26 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.11 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.08 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.07 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 98.96 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 98.88 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.87 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.85 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.82 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.76 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.7 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 98.69 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.62 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.62 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.59 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.58 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.57 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 98.57 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.54 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.53 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 98.49 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.49 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.47 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.45 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 98.41 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.41 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.4 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 98.39 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 98.38 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.36 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.35 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.34 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.27 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.25 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 98.24 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 98.23 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.23 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.22 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.22 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.22 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.19 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.16 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.15 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.15 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.13 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.13 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.09 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.06 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.03 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.02 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.02 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.97 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 97.95 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.94 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.93 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 97.93 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.92 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.92 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.91 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.89 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.88 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.84 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.84 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.83 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 97.82 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.82 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 97.81 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 97.8 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.79 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.78 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 97.76 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.75 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.75 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 97.73 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.72 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.7 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.69 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 97.67 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 97.67 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.66 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 97.65 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.65 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 97.65 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 97.62 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.62 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.62 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.61 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.61 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.58 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 97.56 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 97.55 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.54 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 97.54 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.54 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 97.51 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.5 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.5 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.48 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 97.47 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.46 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 97.45 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.44 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.39 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.36 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.33 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.32 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.32 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 97.26 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.25 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.24 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 97.21 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.18 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.16 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.16 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.12 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.11 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 97.1 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.07 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 97.07 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.05 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 97.03 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 97.03 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.02 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 96.98 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.96 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 96.96 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.95 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.91 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.89 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 96.88 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.85 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 96.83 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.82 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.8 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.75 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.67 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.65 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.61 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 96.6 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.59 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 96.57 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.5 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.49 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.48 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 96.47 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 96.47 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 96.42 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 96.39 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.36 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.35 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.33 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.16 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.15 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.07 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.06 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.05 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.02 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.96 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.94 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.91 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 95.87 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 95.84 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 95.74 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 95.52 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 95.5 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 95.33 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.32 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.3 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 95.1 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 94.9 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 94.79 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.71 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 94.56 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 94.49 | |
| PLN00015 | 308 | protochlorophyllide reductase | 94.41 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 93.97 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 92.83 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 92.62 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 91.75 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 91.5 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 90.81 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 89.94 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 89.26 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 88.64 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 88.46 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 88.08 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 87.67 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 87.25 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 86.8 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 86.56 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 85.89 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 85.28 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 84.81 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 84.13 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 83.26 | |
| PRK10910 | 89 | hypothetical protein; Provisional | 80.35 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 80.26 |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=331.34 Aligned_cols=263 Identities=44% Similarity=0.721 Sum_probs=244.9
Q ss_pred ccccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 3 GKEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 3 g~~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+-...+++..+++||.||+|++++|++.||+|+||+||.+|+|++.+..+.+|+.|+. .++.++|+.||++||+++++
T Consensus 89 ~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p--~~~~d~Y~~sKa~aE~~Vl~ 166 (361)
T KOG1430|consen 89 DFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYP--LKHIDPYGESKALAEKLVLE 166 (361)
T ss_pred cccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCc--cccccccchHHHHHHHHHHH
Confidence 3344579999999999999999999999999999999999999999988999999986 67789999999999999999
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+++ ..++.+|+|||+.|||||+...++.++..++.|...+..|+++...|+++++|++.|+++|..+|.+.
T Consensus 167 an~-------~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~-- 237 (361)
T KOG1430|consen 167 ANG-------SDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDK-- 237 (361)
T ss_pred hcC-------CCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhc--
Confidence 984 36799999999999999999999999999999999999999999999999999999999999988764
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC-ccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 241 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~-~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (389)
.+..+||+|+|+|++|+..++++..+.+.+|+..| ...+|.++...++.+.++++.+++| .+|.+++.
T Consensus 238 ----~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p-------~~p~lt~~ 306 (361)
T KOG1430|consen 238 ----SPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRP-------YQPILTRF 306 (361)
T ss_pred ----CCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccC-------CCCCcChh
Confidence 77889999999999999999999999999999988 8899999999999999999999876 57899999
Q ss_pred HHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccCC
Q 016468 242 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 242 ~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~ 287 (389)
++..+..+++||++||+++|||+|.+++++++++++.|+.......
T Consensus 307 ~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~ 352 (361)
T KOG1430|consen 307 RVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA 352 (361)
T ss_pred heeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence 9999999999999999999999999999999999999887755543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=261.19 Aligned_cols=227 Identities=22% Similarity=0.294 Sum_probs=192.7
Q ss_pred cccCcchhhhHhhhhHHHHHHHHHHHcCCC-eEEEecCCceecCCcccC--CCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 4 KEMLQFGRVDEVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIV--NGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 4 ~~~~~~~~~~~vNv~gt~nll~aa~~~gvk-rlV~~SS~~vvyg~~~~~--~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
++-.+++.+.++|+.||.+|+||+++...+ ||+++||.. |||..... .++|++|+.| .++|++||+.++.++
T Consensus 89 RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDE-VYG~l~~~~~~FtE~tp~~P----sSPYSASKAasD~lV 163 (340)
T COG1088 89 RSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDE-VYGDLGLDDDAFTETTPYNP----SSPYSASKAASDLLV 163 (340)
T ss_pred ccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecccc-ccccccCCCCCcccCCCCCC----CCCcchhhhhHHHHH
Confidence 345689999999999999999999999764 999999999 79987654 5889999999 899999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+++. +++|++++|.|+++-|||..- ..+|.++..+..|++++++|+|.+.+||+||+|-++|+...++
T Consensus 164 ray~-------~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~--- 233 (340)
T COG1088 164 RAYV-------RTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT--- 233 (340)
T ss_pred HHHH-------HHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh---
Confidence 9998 458999999999999999764 6799999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 238 (389)
. ...|++|||+++...+.-|+++.|.+.+|...+... .+...+ . ..|.-
T Consensus 234 --------k-g~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~--------------~li~~V----~----DRpGH 282 (340)
T COG1088 234 --------K-GKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYR--------------DLITFV----E----DRPGH 282 (340)
T ss_pred --------c-CcCCceEEeCCCccchHHHHHHHHHHHhCccccchh--------------hheEec----c----CCCCC
Confidence 2 234999999999999999999999999998766300 000000 0 11111
Q ss_pred CHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 239 LPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 239 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+.....|.+|++++|||+|..++++||++|++||.++.
T Consensus 283 --------D~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~ 320 (340)
T COG1088 283 --------DRRYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNE 320 (340)
T ss_pred --------ccceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhch
Confidence 22336799999999999999999999999999999854
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-32 Score=257.88 Aligned_cols=193 Identities=41% Similarity=0.716 Sum_probs=166.9
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecC---CcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFG---GKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg---~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
..+.+.++++|+.||+||+++|++++|+||||+||.+|++. +.+..+.||+.|+.+ .+.+.|+.||++||+++++
T Consensus 82 ~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~--~~~~~Y~~SK~~AE~~V~~ 159 (280)
T PF01073_consen 82 DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS--SPLDPYAESKALAEKAVLE 159 (280)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc--cccCchHHHHHHHHHHHHh
Confidence 35678899999999999999999999999999999997665 445556788887654 3678999999999999999
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+++..+++ +..+.+|+|||+.||||++....+.+...++.|...+.+|+++...+++||+|+|+||++|+++|.+..
T Consensus 160 a~~~~~~~--g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~- 236 (280)
T PF01073_consen 160 ANGSELKN--GGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPG- 236 (280)
T ss_pred hccccccc--ccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccc-
Confidence 98643332 236999999999999999998899999999999888889999999999999999999999999876531
Q ss_pred CCCCCCCCCCceEEEeCCCCCC-hHHHHHHHHHhCCCCCCc-cccC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN-TFEFIGPLLKTLDYDLPK-SWLA 206 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s-~~e~~~~l~~~lg~~~~~-~~~p 206 (389)
+.....|++|+|+|++|++ ++||++.+.+.+|++.+. .++|
T Consensus 237 ---~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 237 ---KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred ---ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 1356789999999999999 999999999999999876 6666
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=261.54 Aligned_cols=229 Identities=17% Similarity=0.208 Sum_probs=180.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++....++|+.||.||+++|++.+++||||+||.. +||..+..+.+|+++..| .+.|+.||..+|+++..+.
T Consensus 108 ~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~e~~~~~p----~~~Y~~sK~~~e~~~~~~~-- 180 (348)
T PRK15181 108 KDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSS-TYGDHPDLPKIEERIGRP----LSPYAVTKYVNELYADVFA-- 180 (348)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechH-hhCCCCCCCCCCCCCCCC----CChhhHHHHHHHHHHHHHH--
Confidence 456778999999999999999999999999999998 798765556677766555 6899999999999998875
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
++.+++++++||++||||++. ..++.++..+..|..+.++|+|++.+||+|++|+|+++++++..-
T Consensus 181 -----~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~--- 252 (348)
T PRK15181 181 -----RSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTN--- 252 (348)
T ss_pred -----HHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc---
Confidence 236899999999999999763 246888888888888888899999999999999999999877520
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
.....+++|||++++++|++|+++.+.+.++........... ...+. .+
T Consensus 253 ------~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~------------------------~~~~~-~~ 301 (348)
T PRK15181 253 ------DLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEP------------------------IYKDF-RD 301 (348)
T ss_pred ------cccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCc------------------------ccCCC-CC
Confidence 112357899999999999999999999998743210000000 00000 01
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.+. ....+|++|++++|||+|+++++++++++++|++.+..
T Consensus 302 ~~~----~~~~~d~~k~~~~lGw~P~~sl~egl~~~~~w~~~~~~ 342 (348)
T PRK15181 302 GDV----KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHS 342 (348)
T ss_pred Ccc----cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 111 12368999999999999999999999999999987643
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=241.85 Aligned_cols=227 Identities=21% Similarity=0.257 Sum_probs=188.6
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcccCCCC-CCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGN-ESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~~~~~~-E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+..++-.+...|+.+|.+++++++.. ++++|||+||.. |||+......+ |...+.| .++|+.||++||+.+++
T Consensus 96 s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde-VYGds~~~~~~~E~s~~nP----tnpyAasKaAaE~~v~S 170 (331)
T KOG0747|consen 96 SFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE-VYGDSDEDAVVGEASLLNP----TNPYAASKAAAEMLVRS 170 (331)
T ss_pred hcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc-eecCccccccccccccCCC----CCchHHHHHHHHHHHHH
Confidence 34567778899999999999999999 699999999999 79998776655 8887777 89999999999999999
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+. ++++++++++|..+||||++- ..+|.++..+..+.+.++-|+|.+.++|+||+|+++|+..+.+
T Consensus 171 y~-------~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~----- 238 (331)
T KOG0747|consen 171 YG-------RSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLE----- 238 (331)
T ss_pred Hh-------hccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHh-----
Confidence 97 568999999999999999886 5689999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
. ...|++|||+++.+++.-|+++.+.+.+++..+....+.+ +..-+
T Consensus 239 ------K-g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~---------------------------~~~v~ 284 (331)
T KOG0747|consen 239 ------K-GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPF---------------------------IFFVE 284 (331)
T ss_pred ------c-CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCc---------------------------ceecC
Confidence 2 3469999999999999999999998888765442221111 11101
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+.-++ +.....|.+|++ .|||+|++++++||+.+++||.++.
T Consensus 285 dRp~n-d~Ry~~~~eKik-~LGw~~~~p~~eGLrktie~y~~~~ 326 (331)
T KOG0747|consen 285 DRPYN-DLRYFLDDEKIK-KLGWRPTTPWEEGLRKTIEWYTKNF 326 (331)
T ss_pred CCCcc-cccccccHHHHH-hcCCcccCcHHHHHHHHHHHHHhhh
Confidence 10000 122468999999 7999999999999999999998865
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=239.27 Aligned_cols=223 Identities=22% Similarity=0.275 Sum_probs=184.6
Q ss_pred cccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 4 KEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 4 ~~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
-+..+|..+++.|+.||.+|+++|+++||++|||.||.. |||.+...|++|+.|..| .++||+||.+.|+++..+
T Consensus 82 ESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAa-vYG~p~~~PI~E~~~~~p----~NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 82 ESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAA-VYGEPTTSPISETSPLAP----INPYGRSKLMSEEILRDA 156 (329)
T ss_pred hhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchh-hcCCCCCcccCCCCCCCC----CCcchhHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999988 799999999999999888 899999999999999998
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC-----------CCHHHHHHHHHcCCC-cceec------CCCccccceeHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----------RHLPRIVSLAKLGLV-PFKIG------EPSVKTDWIYVDN 145 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----------~~~~~li~~~~~g~~-~~~~g------~~~~~~~~v~vdD 145 (389)
.. ..+++.+++|..++-|...+ ..+|.+.+.+.-.+. +.++| ||+..+|||||.|
T Consensus 157 ~~-------a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~D 229 (329)
T COG1087 157 AK-------ANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDD 229 (329)
T ss_pred HH-------hCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhH
Confidence 73 36799999999999986432 224555555443333 56666 5889999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLY 225 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~ 225 (389)
+|+||++|++.|.+. ....+||++.|...|++|+++.+.+..|.+.|....|.+
T Consensus 230 LA~aH~~Al~~L~~~---------g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR----------------- 283 (329)
T COG1087 230 LADAHVLALKYLKEG---------GSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRR----------------- 283 (329)
T ss_pred HHHHHHHHHHHHHhC---------CceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCC-----------------
Confidence 999999999977532 122699999999999999999999999988775544332
Q ss_pred hccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCC-ChHHHHHHHHHHHHH
Q 016468 226 PWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQD 282 (389)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~~~~~ 282 (389)
+ .+|. ..+.|++|++++|||+|++ ++++.++++..|.+.
T Consensus 284 -----~--GDpa-----------~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 284 -----A--GDPA-----------ILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQ 323 (329)
T ss_pred -----C--CCCc-----------eeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhh
Confidence 0 1111 2378999999999999999 999999999999984
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=251.08 Aligned_cols=219 Identities=20% Similarity=0.225 Sum_probs=178.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCC-----CCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESL-----PYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~-----p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.++...+++|+.||.||+++|++.++ |+||+||.. |||.....+.+|+. |..| .+.|+.||..+|+++.
T Consensus 202 ~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~-VYg~~~~~p~~E~~~~~~~p~~p----~s~Yg~SK~~aE~~~~ 275 (436)
T PLN02166 202 YNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLEHPQKETYWGNVNPIGE----RSCYDEGKRTAETLAM 275 (436)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHH-HhCCCCCCCCCccccccCCCCCC----CCchHHHHHHHHHHHH
Confidence 46778899999999999999999997 899999998 79976555667763 3333 6789999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+. ++.+++++++||++||||++. +.++.++..+..+..+.++|++++.++|+|++|++++++.+++
T Consensus 276 ~y~-------~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~-- 346 (436)
T PLN02166 276 DYH-------RGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALME-- 346 (436)
T ss_pred HHH-------HHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh--
Confidence 986 336899999999999999853 4567888888888888888999999999999999999999886
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.. .+++|||++++++|+.|+++.+.+.+|.+......|. .
T Consensus 347 ---------~~--~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~----------------------------~- 386 (436)
T PLN02166 347 ---------GE--HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPN----------------------------T- 386 (436)
T ss_pred ---------cC--CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCC----------------------------C-
Confidence 22 2359999999999999999999999987643322111 0
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
.++. .....|++|++++|||+|+++++++++++++||+++...
T Consensus 387 --~~~~----~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~~~~ 429 (436)
T PLN02166 387 --ADDP----HKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNRILN 429 (436)
T ss_pred --CCCc----cccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 0000 123679999999999999999999999999999875443
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=240.68 Aligned_cols=241 Identities=17% Similarity=0.167 Sum_probs=178.4
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCC---CCCCCCCcHHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF---PIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~---p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
..+++..+++|+.+|.|++++|++.+ +|+||+||.. +||.....+.+|+.+.. |...+.+.|+.||..+|+.++.
T Consensus 85 ~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~-vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~ 162 (347)
T PRK11908 85 VKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSE-VYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWA 162 (347)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecce-eeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHH
Confidence 35677889999999999999999998 7999999998 79865554566654321 2234467899999999999998
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC----------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~----------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
+.. ..+++++++||++||||+.. +.++.++..+..|..+.+++++++.++|+|++|++++++.
T Consensus 163 ~~~-------~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~ 235 (347)
T PRK11908 163 YGM-------EEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMK 235 (347)
T ss_pred HHH-------HcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHH
Confidence 862 36899999999999999742 3467888888888887778889999999999999999999
Q ss_pred HHhcccCCCCCCCCCC-CCCCceEEEeCC-CCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Q 016468 153 ASMGLLDDIPGQKGRP-IASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR 230 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~-~~~g~~y~i~~~-~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 230 (389)
++++ .+ ...|++|||+++ ..+|++|+++.+.+.+|..+.....+.++ . +. .
T Consensus 236 ~~~~----------~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~-~----~~-----------~- 288 (347)
T PRK11908 236 IIEN----------KDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKV-K----LV-----------E- 288 (347)
T ss_pred HHhC----------ccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccccccccccc-c----cc-----------c-
Confidence 9872 11 245789999986 58999999999999998543321111000 0 00 0
Q ss_pred ccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 231 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.+.+...... .........|++|++++|||+|++++++++.++++|++++..
T Consensus 289 --~~~~~~~~~~-~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~ 340 (347)
T PRK11908 289 --TTSGAYYGKG-YQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVA 340 (347)
T ss_pred --CCchhccCcC-cchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 0000000000 000112356899999999999999999999999999987654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-29 Score=242.18 Aligned_cols=232 Identities=22% Similarity=0.263 Sum_probs=180.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH---------cCCCeEEEecCCceecCCcc--cCCCCCCCCCCCCCCCCCcHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE---------FGIQRLVYVSTYNVVFGGKE--IVNGNESLPYFPIDEHVDSYGRSKSV 75 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~---------~gvkrlV~~SS~~vvyg~~~--~~~~~E~~p~~p~~~~~~~Y~~SK~~ 75 (389)
.+++.++++|+.||.|++++|.+ .+++++|++||.. +||... ..+.+|+.+..| .+.|+.||..
T Consensus 92 ~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~E~~~~~p----~s~Y~~sK~~ 166 (355)
T PRK10217 92 DGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE-VYGDLHSTDDFFTETTPYAP----SSPYSASKAS 166 (355)
T ss_pred hChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh-hcCCCCCCCCCcCCCCCCCC----CChhHHHHHH
Confidence 45678999999999999999987 3578999999998 698532 335788877666 6899999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 76 AEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 76 aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
+|+++..+. ++.+++++++||++||||++. +.++.++..+..+..+.++|++++.++|+|++|+|+++..+
T Consensus 167 ~e~~~~~~~-------~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~ 239 (355)
T PRK10217 167 SDHLVRAWL-------RTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV 239 (355)
T ss_pred HHHHHHHHH-------HHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHH
Confidence 999999875 236899999999999999874 45677888888887777889999999999999999999999
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWL 233 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~ 233 (389)
++ .. ..|++||+++++++|++|+++.+.+.+|...+..+++.... .+ . +. +.
T Consensus 240 ~~-----------~~-~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~--~~-~-----------~~--~~ 291 (355)
T PRK10217 240 AT-----------TG-KVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHY--RD-L-----------IT--FV 291 (355)
T ss_pred Hh-----------cC-CCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccc--cc-c-----------ce--ec
Confidence 86 32 34689999999999999999999999986443322211100 00 0 00 00
Q ss_pred CCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 234 PQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+.. +.. ......|++|++++|||+|+++++++++++++||+.+..
T Consensus 292 ~~~---~~~----~~~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 292 ADR---PGH----DLRYAIDASKIARELGWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred CCC---CCC----CcccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence 000 000 112368999999999999999999999999999988643
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=246.24 Aligned_cols=221 Identities=19% Similarity=0.201 Sum_probs=176.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCC--CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLP--YFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p--~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.++....++|+.||.||+++|++.++ |+||+||.. +||.....+.+|+.. ..| ..+.+.|+.||..+|+++..+.
T Consensus 201 ~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~-VYg~~~~~p~~E~~~~~~~P-~~~~s~Y~~SK~~aE~~~~~y~ 277 (442)
T PLN02206 201 FNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSE-VYGDPLQHPQVETYWGNVNP-IGVRSCYDEGKRTAETLTMDYH 277 (442)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChH-HhCCCCCCCCCccccccCCC-CCccchHHHHHHHHHHHHHHHH
Confidence 46788899999999999999999997 899999998 798765556666531 112 1225789999999999999875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCC----CCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~----~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
++.+++++++||++||||+. .+.++.++..+..+..+.++|++++.++|+|++|+|++++.+++
T Consensus 278 -------~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e----- 345 (442)
T PLN02206 278 -------RGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLME----- 345 (442)
T ss_pred -------HHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHh-----
Confidence 23689999999999999974 24567788888888888888999999999999999999999986
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
.. .+++|||+++++++++|+++.+.+.+|.+......|.. ..
T Consensus 346 ------~~--~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~-------------------------~~----- 387 (442)
T PLN02206 346 ------GE--HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT-------------------------ED----- 387 (442)
T ss_pred ------cC--CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC-------------------------CC-----
Confidence 22 23589999999999999999999999865433222210 00
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+ ......|++|++++|||+|+++++++|+++++||++...
T Consensus 388 -~----~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~~ 427 (442)
T PLN02206 388 -D----PHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVF 427 (442)
T ss_pred -C----ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhh
Confidence 0 112368999999999999999999999999999987543
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-27 Score=226.27 Aligned_cols=244 Identities=23% Similarity=0.272 Sum_probs=191.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCC-cccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGG-KEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~-~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++.++++|+.++.+++++|++.+++++|++||.. +|+. ....+.+|+.+..|. ...+.|+.+|..+|++++++..
T Consensus 80 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~-~~~~~~~~~~~~e~~~~~~~-~~~~~Y~~sK~~~e~~~~~~~~ 157 (328)
T TIGR03466 80 PDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVA-TLGVRGDGTPADETTPSSLD-DMIGHYKRSKFLAEQAALEMAA 157 (328)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechh-hcCcCCCCCCcCccCCCCcc-cccChHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999998 6875 334467888776542 2246899999999999999862
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
..+++++++||+++|||++... ...++..+..+...... +...+|+|++|+|++++.+++
T Consensus 158 -------~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~-------- 219 (328)
T TIGR03466 158 -------EKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALE-------- 219 (328)
T ss_pred -------hcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHh--------
Confidence 3589999999999999987532 23344444444422222 234689999999999999987
Q ss_pred CCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHH
Q 016468 164 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV 243 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (389)
.+ ..|+.|+++ +++++++|+++.+.+.+|.+.+...+|.+.+..++.+.+.+...+. ..|..+...+
T Consensus 220 ---~~-~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 286 (328)
T TIGR03466 220 ---RG-RIGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTG--------KEPRVTVDGV 286 (328)
T ss_pred ---CC-CCCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcC--------CCCCCCHHHH
Confidence 22 246778775 6889999999999999998888888999999888888877765542 3444556666
Q ss_pred HHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 244 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 244 ~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.....+..+|++|++++|||+|+ ++++++.++++||++++
T Consensus 287 ~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~~ 326 (328)
T TIGR03466 287 RMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRANG 326 (328)
T ss_pred HHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHhC
Confidence 66666778999999999999996 99999999999998753
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=237.72 Aligned_cols=234 Identities=16% Similarity=0.148 Sum_probs=169.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCC------------------CCCCCCCcH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF------------------PIDEHVDSY 69 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~------------------p~~~~~~~Y 69 (389)
++......|+.++.|++++|++.+ +||||+||.. +||.......+|+.|.. |...+.+.|
T Consensus 105 ~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~-vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y 182 (386)
T PLN02427 105 RPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCE-VYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSY 182 (386)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeee-eeCCCcCCCCCcccccccccccccccccccccccCCCCccccch
Confidence 444566789999999999999888 8999999998 79865433334433321 112235689
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-------------CCHHHHHHHHHcCCCcceecCCCc
Q 016468 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------------RHLPRIVSLAKLGLVPFKIGEPSV 136 (389)
Q Consensus 70 ~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------------~~~~~li~~~~~g~~~~~~g~~~~ 136 (389)
+.||..+|+++..+.+ ..+++++++||++||||++. ..++.++..+..++++.++|++++
T Consensus 183 ~~sK~~~E~~~~~~~~-------~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~ 255 (386)
T PLN02427 183 ACAKQLIERLIYAEGA-------ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQS 255 (386)
T ss_pred HHHHHHHHHHHHHHHh-------hcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCc
Confidence 9999999999998763 36899999999999999753 123344566677887788899999
Q ss_pred cccceeHHHHHHHHHHHHhcccCCCCCCCCCC-CCCCceEEEeCC-CCCChHHHHHHHHHhCCCCC--CccccCHHHHHH
Q 016468 137 KTDWIYVDNLVLALILASMGLLDDIPGQKGRP-IASGQPYFVSDG-FPINTFEFIGPLLKTLDYDL--PKSWLAVPHALF 212 (389)
Q Consensus 137 ~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~-~~~g~~y~i~~~-~~~s~~e~~~~l~~~lg~~~--~~~~~p~~~~~~ 212 (389)
.++|+||+|+|++++.+++ .+ ...|++||++++ +++++.|+++.+.+.+|... +....+..
T Consensus 256 ~r~~i~V~Dva~ai~~al~-----------~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---- 320 (386)
T PLN02427 256 QRTFVYIKDAIEAVLLMIE-----------NPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTV---- 320 (386)
T ss_pred eECcEeHHHHHHHHHHHHh-----------CcccccCceEEeCCCCCCccHHHHHHHHHHHhcccccccccccccc----
Confidence 9999999999999999987 33 245789999987 69999999999999998421 11000000
Q ss_pred HHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 213 LGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 213 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
. .++....+..... ......|.+|++++|||+|+++++++|+++++|++....
T Consensus 321 ----------------~---~~~~~~~~~~~~~-~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~~ 373 (386)
T PLN02427 321 ----------------D---VSSKEFYGEGYDD-SDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTYA 373 (386)
T ss_pred ----------------c---cCcccccCccccc-hhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHHH
Confidence 0 0000000000000 112367999999999999999999999999999987543
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=254.77 Aligned_cols=241 Identities=16% Similarity=0.164 Sum_probs=182.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC---CCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY---FPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~---~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+++.++++|+.+|.|++++|++.+ +|+||+||.. +||.....+.+|+.+. .|...+.+.|+.||..+|+++..+
T Consensus 400 ~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~ 477 (660)
T PRK08125 400 RNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSE-VYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAY 477 (660)
T ss_pred cCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchh-hcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHH
Confidence 4566788999999999999999998 8999999998 7986555567888754 232234678999999999999998
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC----------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~----------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
. +..+++++++||++||||++. +.++.++..+..+.++.++|++++.++|+|++|+|++++.+
T Consensus 478 ~-------~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~ 550 (660)
T PRK08125 478 G-------EKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRI 550 (660)
T ss_pred H-------HhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHH
Confidence 6 236899999999999999753 34778888888888887889999999999999999999999
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCC-CCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW 232 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~-~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~ 232 (389)
++.. .....|++|||++++ ++|++|+++.+.+.+|.......+|....... .
T Consensus 551 l~~~---------~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~--~---------------- 603 (660)
T PRK08125 551 IENK---------DNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRV--V---------------- 603 (660)
T ss_pred Hhcc---------ccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccc--c----------------
Confidence 8720 112357899999985 79999999999999986433233322100000 0
Q ss_pred CCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 233 LPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
......+.. ..-......|++|++++|||+|+++++++|+++++||+++.+
T Consensus 604 -~~~~~~~~~-~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~ 654 (660)
T PRK08125 604 -ESSSYYGKG-YQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_pred -ccccccccc-cccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccc
Confidence 000000000 000112357999999999999999999999999999997655
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=235.35 Aligned_cols=226 Identities=21% Similarity=0.229 Sum_probs=176.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---------CCCeEEEecCCceecCCccc----------CCCCCCCCCCCCCCCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---------GIQRLVYVSTYNVVFGGKEI----------VNGNESLPYFPIDEHVD 67 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---------gvkrlV~~SS~~vvyg~~~~----------~~~~E~~p~~p~~~~~~ 67 (389)
.+++.++++|+.||.|++++|++. +++++||+||.. +||.... .+.+|+++..| .+
T Consensus 91 ~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~~E~~~~~p----~~ 165 (352)
T PRK10084 91 TGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE-VYGDLPHPDEVENSEELPLFTETTAYAP----SS 165 (352)
T ss_pred cCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh-hcCCCCccccccccccCCCccccCCCCC----CC
Confidence 456889999999999999999874 577999999998 6885321 23567777666 78
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 68 SYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 68 ~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
.|+.||..+|++++.+.. ..+++++++||+.||||++. +.++.++..+..+..+.++|++++.++|+|++|
T Consensus 166 ~Y~~sK~~~E~~~~~~~~-------~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (352)
T PRK10084 166 PYSASKASSDHLVRAWLR-------TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (352)
T ss_pred hhHHHHHHHHHHHHHHHH-------HhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHH
Confidence 999999999999998752 36899999999999999864 457778888887877778899999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLY 225 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~ 225 (389)
+|+++..+++ . ...+++||++++++++++|+++.+.+.+|...|. ..|.. ..+.
T Consensus 239 ~a~a~~~~l~-----------~-~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~-~~~~~---------~~~~---- 292 (352)
T PRK10084 239 HARALYKVVT-----------E-GKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPK-ATSYR---------EQIT---- 292 (352)
T ss_pred HHHHHHHHHh-----------c-CCCCceEEeCCCCcCcHHHHHHHHHHHhcccccc-ccchh---------hhcc----
Confidence 9999999886 2 2347899999999999999999999999864332 11110 0000
Q ss_pred hccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 226 PWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+.+..+ .. .....+|++|++++|||+|+++++++|+++++|++++
T Consensus 293 ------~~~~~~---~~----~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 293 ------YVADRP---GH----DRRYAIDASKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred ------ccccCC---CC----CceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 001100 00 1123589999999999999999999999999999885
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=234.63 Aligned_cols=218 Identities=18% Similarity=0.166 Sum_probs=171.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc----CCCCCCC--CCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI----VNGNESL--PYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~----~~~~E~~--p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
++......|+.++.||+++|++.++++|||+||.. +||.... .+.+|++ |..| .+.|+.+|..+|++++
T Consensus 105 ~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~-vYg~~~~~~~~~~~~E~~~~p~~p----~s~Yg~sK~~~E~~~~ 179 (370)
T PLN02695 105 NHSVIMYNNTMISFNMLEAARINGVKRFFYASSAC-IYPEFKQLETNVSLKESDAWPAEP----QDAYGLEKLATEELCK 179 (370)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchh-hcCCccccCcCCCcCcccCCCCCC----CCHHHHHHHHHHHHHH
Confidence 45566789999999999999999999999999998 7986432 1345544 4444 6899999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHc-CCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
.+.. +.+++++++||++||||++. ...+.++..+.. +..+.++|++++.++|+|++|+++++..++
T Consensus 180 ~~~~-------~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~ 252 (370)
T PLN02695 180 HYTK-------DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLT 252 (370)
T ss_pred HHHH-------HhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHH
Confidence 8752 36899999999999999753 124566665554 456677899999999999999999999887
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
+ .. .+++||+++++++|++|+++.+.+..|.+.+....|.
T Consensus 253 ~-----------~~--~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~--------------------------- 292 (370)
T PLN02695 253 K-----------SD--FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPG--------------------------- 292 (370)
T ss_pred h-----------cc--CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCC---------------------------
Confidence 5 22 2568999999999999999999999987554333221
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
+.- . .....|++|++++|||+|+++++++|+++++|+++....
T Consensus 293 -~~~----~----~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~~~~~~~ 335 (370)
T PLN02695 293 -PEG----V----RGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQIEK 335 (370)
T ss_pred -CCC----c----cccccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 100 0 112479999999999999999999999999999985543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-27 Score=227.67 Aligned_cols=224 Identities=16% Similarity=0.207 Sum_probs=171.5
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCC-cHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVD-SYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~-~Y~~SK~~aE~~l~~~~ 84 (389)
..++..++++|+.++.||+++|++++++|+||+||.. |||+....+.+|+++......+.+ .|+.||..+|++++.+.
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~ 145 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSC-IYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYR 145 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCcee-ecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 3467778999999999999999999999999999998 799766667888763321112233 59999999999998875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHH----HHcCCCcce-ecCCCccccceeHHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSL----AKLGLVPFK-IGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~----~~~g~~~~~-~g~~~~~~~~v~vdDla~a~~~a 153 (389)
. ..+++++++||+.||||++. ..++.++.. ...+.+... +|++++.++|+|++|+|++++.+
T Consensus 146 ~-------~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~ 218 (306)
T PLN02725 146 I-------QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFL 218 (306)
T ss_pred H-------HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHH
Confidence 2 35799999999999999753 235555543 344555444 68899999999999999999999
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWL 233 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~ 233 (389)
++ ... .++.||+++++++|+.|+++.+.+.+|.+......+
T Consensus 219 ~~-----------~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~--------------------------- 259 (306)
T PLN02725 219 MR-----------RYS-GAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDT--------------------------- 259 (306)
T ss_pred Hh-----------ccc-cCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecC---------------------------
Confidence 87 222 345789999999999999999999998654322111
Q ss_pred CCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 234 PQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
..+. . .....+|++|++ +|||+|+++++++++++++|++++..
T Consensus 260 ~~~~----~----~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~~ 302 (306)
T PLN02725 260 SKPD----G----TPRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYLENYE 302 (306)
T ss_pred CCCC----c----ccccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 0000 0 012368999997 59999999999999999999998654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=232.11 Aligned_cols=234 Identities=19% Similarity=0.208 Sum_probs=170.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCC---eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQ---RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvk---rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
++....++|+.||.|++++|++.+++ |+||+||.. +||.....+.+|+.|..| .+.|+.||..+|.++..+.
T Consensus 97 ~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~e~~~~~~~ 171 (343)
T TIGR01472 97 IPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSE-LYGKVQEIPQNETTPFYP----RSPYAAAKLYAHWITVNYR 171 (343)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHH-hhCCCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHHHH
Confidence 45667788999999999999998874 899999998 799766556788888776 7899999999999999886
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC-CC----HHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE-RH----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~----~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
++.++++++.|+.++|||+.. .. +..++..+..|+. ...+|+|++.+||+||+|+|++++++++
T Consensus 172 -------~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~--- 241 (343)
T TIGR01472 172 -------EAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQ--- 241 (343)
T ss_pred -------HHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHh---
Confidence 235788999999999999643 22 3445556666753 4456999999999999999999999986
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccc--cCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW--WLPQP 236 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~ 236 (389)
.+. ++.|||++++++|++|+++.+.+.+|.+.+....+..... ..++.... .....
T Consensus 242 --------~~~--~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 299 (343)
T TIGR01472 242 --------QDK--PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVG------------RCKETGKVHVEIDPR 299 (343)
T ss_pred --------cCC--CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccc------------cccccCceeEEeCcc
Confidence 221 3589999999999999999999999965321110000000 00000000 00000
Q ss_pred CCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 237 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
...+.++.. ...|++|++++|||+|+++++++|++++++|++
T Consensus 300 ~~~~~~~~~----~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 300 YFRPTEVDL----LLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred ccCCCccch----hcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 011111111 257999999999999999999999999999974
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=231.44 Aligned_cols=226 Identities=20% Similarity=0.215 Sum_probs=175.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++..++++|+.++.|++++|++.+++++|++||.. +||.....+.+|+.+..| .+.|+.||..+|++++++..
T Consensus 99 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-vyg~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~- 172 (352)
T PLN02240 99 AKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSAT-VYGQPEEVPCTEEFPLSA----TNPYGRTKLFIEEICRDIHA- 172 (352)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH-HhCCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHH-
Confidence 466778999999999999999999999999999987 798766667889988776 68999999999999998742
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC--------C---CHHHHHHHHHcCC--Ccceec------CCCccccceeHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE--------R---HLPRIVSLAKLGL--VPFKIG------EPSVKTDWIYVDNLV 147 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~--------~---~~~~li~~~~~g~--~~~~~g------~~~~~~~~v~vdDla 147 (389)
...+++++++|++++||++.. . .+..++..+..++ .+.++| +|++.++|+|++|+|
T Consensus 173 -----~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a 247 (352)
T PLN02240 173 -----SDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLA 247 (352)
T ss_pred -----hcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHH
Confidence 124689999999999997421 1 1223444455443 233444 678999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhc
Q 016468 148 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPW 227 (389)
Q Consensus 148 ~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~ 227 (389)
++++.+++.+.+ .+...+++||+++++++|++|+++.+.+.+|.+.+....|.
T Consensus 248 ~a~~~a~~~~~~-------~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-------------------- 300 (352)
T PLN02240 248 DGHIAALRKLFT-------DPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPR-------------------- 300 (352)
T ss_pred HHHHHHHhhhhh-------ccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCC--------------------
Confidence 999999874321 12345689999999999999999999999997655432221
Q ss_pred cccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 228 LNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.+. +. .....|++|++++|||+|+++++++|+++++|++++..
T Consensus 301 -------~~~----~~----~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~ 343 (352)
T PLN02240 301 -------RPG----DA----EEVYASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPY 343 (352)
T ss_pred -------CCC----Ch----hhhhcCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcc
Confidence 010 01 12257999999999999999999999999999998653
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=238.95 Aligned_cols=222 Identities=18% Similarity=0.180 Sum_probs=167.4
Q ss_pred hhhhHhhhhHHHHHHHHHHHcCCC-eEEEecCCceecCCcccCCCCC-----------CCCCCCCCCCCCcHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVNGNE-----------SLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~gvk-rlV~~SS~~vvyg~~~~~~~~E-----------~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+..+++|+.||.|++++|++.|++ +||++||.. +||... .+.+| +++..| ..+.+.|+.||..+|
T Consensus 160 ~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~-vYG~~~-~~~~E~~i~~~~~~~e~~~~~~-~~P~s~Yg~SK~a~E 236 (442)
T PLN02572 160 VFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMG-EYGTPN-IDIEEGYITITHNGRTDTLPYP-KQASSFYHLSKVHDS 236 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEEEecce-ecCCCC-CCCcccccccccccccccccCC-CCCCCcchhHHHHHH
Confidence 455789999999999999999986 999999998 798643 12222 221111 233689999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-------------------CCHHHHHHHHHcCCCcceecCCCccc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGEPSVKT 138 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------------------~~~~~li~~~~~g~~~~~~g~~~~~~ 138 (389)
+++..+.. ..|++++++||++||||++. +.++.++..+..|+++.++|+|++.+
T Consensus 237 ~l~~~~~~-------~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~R 309 (442)
T PLN02572 237 HNIAFTCK-------AWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTR 309 (442)
T ss_pred HHHHHHHH-------hcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEE
Confidence 99998863 36899999999999999853 23456667777788777889999999
Q ss_pred cceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCC--ceEEEeCCCCCChHHHHHHHHHh---CCCCCCccccCHHHHHHH
Q 016468 139 DWIYVDNLVLALILASMGLLDDIPGQKGRPIASG--QPYFVSDGFPINTFEFIGPLLKT---LDYDLPKSWLAVPHALFL 213 (389)
Q Consensus 139 ~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g--~~y~i~~~~~~s~~e~~~~l~~~---lg~~~~~~~~p~~~~~~~ 213 (389)
||+||+|+|++++.+++ .+...| .+||+++ +.+|+.|+++.+.+. +|.+.+....|.
T Consensus 310 dfi~V~Dva~a~~~al~-----------~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~~~p~------ 371 (442)
T PLN02572 310 GFLDIRDTVRCIEIAIA-----------NPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVISVPN------ 371 (442)
T ss_pred CeEEHHHHHHHHHHHHh-----------ChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCeeeCCC------
Confidence 99999999999999986 222223 5899976 679999999999999 886544322221
Q ss_pred HHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCC---ChHHHHHHHHHHHHHcccCC
Q 016468 214 GKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV---SPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 214 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~---sl~~~l~~~v~~~~~~~~~~ 287 (389)
+. ...+ ......|.+|++ +|||+|++ ++++++.+++.||+++-...
T Consensus 372 ----------------------~~-~~~~----~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~~~~~~~~~~~~~ 420 (442)
T PLN02572 372 ----------------------PR-VEAE----EHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLNFAVKYKDRVDTT 420 (442)
T ss_pred ----------------------Cc-cccc----ccccCccHHHHH-HcCCCCCCcHHHHHHHHHHHHHHHHhhcchh
Confidence 10 0000 112257899997 59999998 89999999999999765544
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=226.28 Aligned_cols=215 Identities=18% Similarity=0.209 Sum_probs=165.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+.+...+.|+.+|.||+++|++.++ ++||+||.. +||.....+.+|+.+..| .+.|+.||..+|+.++++.
T Consensus 85 ~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~--- 155 (308)
T PRK11150 85 DGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRTDDFIEEREYEKP----LNVYGYSKFLFDEYVRQIL--- 155 (308)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchH-HhCcCCCCCCccCCCCCC----CCHHHHHHHHHHHHHHHHH---
Confidence 4456789999999999999999998 699999998 798764445677776666 6899999999999999985
Q ss_pred CCCCCCCCceEEEEecCceecCCCCC--C----HHHHHHHHHcCCCccee-cCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEER--H----LPRIVSLAKLGLVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~--~----~~~li~~~~~g~~~~~~-g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.+.+++++++||++||||++.. . ...+...+.+|....++ |+++..++|+|++|+|++++.+++
T Consensus 156 ----~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~----- 226 (308)
T PRK11150 156 ----PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWE----- 226 (308)
T ss_pred ----HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHh-----
Confidence 2368999999999999998642 2 23455667777654444 677788999999999999999886
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
.. .+++||+++++++|+.|+++.+.+.+|.. +....|. +.+. ..
T Consensus 227 ------~~--~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~--------------------------~~~~-~~ 270 (308)
T PRK11150 227 ------NG--VSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPF--------------------------PDKL-KG 270 (308)
T ss_pred ------cC--CCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccC--------------------------cccc-cc
Confidence 22 24699999999999999999999999842 2111111 1100 00
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCC-ChHHHHHHHHHHHH
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQ 281 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~~~~ 281 (389)
........|++|+++ +||+|+. +++++|+++++|+.
T Consensus 271 ----~~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 271 ----RYQAFTQADLTKLRA-AGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred ----ccceecccCHHHHHh-cCCCCCCCCHHHHHHHHHHHhh
Confidence 011123579999986 7999874 99999999999975
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=227.82 Aligned_cols=220 Identities=18% Similarity=0.220 Sum_probs=172.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC-----eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ-----RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk-----rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++...++|+.||.|++++|++.+++ ++|++||.. +||.... +.+|+.|..| .+.|+.||..+|+++.
T Consensus 101 ~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~-vyg~~~~-~~~E~~~~~p----~~~Y~~sK~~~e~~~~ 174 (340)
T PLN02653 101 EMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSE-MYGSTPP-PQSETTPFHP----RSPYAVAKVAAHWYTV 174 (340)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHH-HhCCCCC-CCCCCCCCCC----CChhHHHHHHHHHHHH
Confidence 456677899999999999999999876 899999988 7987654 6788888776 6899999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC-CH----HHHHHHHHcCCCcce-ecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HL----PRIVSLAKLGLVPFK-IGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~----~~li~~~~~g~~~~~-~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.. +.++.++..|+.++|||+... .+ ..++..+..+....+ .|++++.+||+|++|+|++++.+++
T Consensus 175 ~~~~-------~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~ 247 (340)
T PLN02653 175 NYRE-------AYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQ 247 (340)
T ss_pred HHHH-------HcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHh
Confidence 8862 367888999999999996542 22 344455667765544 4999999999999999999999987
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC-ccccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~-~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
.. .++.||+++++++|++|+++.+.+.+|.+.. ...+. +
T Consensus 248 -----------~~--~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~---------------------------~ 287 (340)
T PLN02653 248 -----------QE--KPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEID---------------------------P 287 (340)
T ss_pred -----------cC--CCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeC---------------------------c
Confidence 22 2458999999999999999999999986421 11110 1
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+...+.++. ....|++|++++|||+|+++++++|+++++||++.-
T Consensus 288 -~~~~~~~~~----~~~~d~~k~~~~lgw~p~~~l~~gi~~~~~~~~~~~ 332 (340)
T PLN02653 288 -RYFRPAEVD----NLKGDASKAREVLGWKPKVGFEQLVKMMVDEDLELA 332 (340)
T ss_pred -ccCCccccc----cccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence 111111221 125799999999999999999999999999998643
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-27 Score=223.05 Aligned_cols=220 Identities=24% Similarity=0.308 Sum_probs=177.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC-eEEEecCCceecCCcccC-CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIV-NGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk-rlV~~SS~~vvyg~~~~~-~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+++.+.++|+.++.+++++|++.+.+ ++|++||.. +||..... +.+|+.+..| .+.|+.+|..+|.+++++.
T Consensus 91 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~-v~g~~~~~~~~~e~~~~~~----~~~Y~~sK~~~e~~~~~~~ 165 (317)
T TIGR01181 91 SGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDE-VYGDLEKGDAFTETTPLAP----SSPYSASKAASDHLVRAYH 165 (317)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccc-eeCCCCCCCCcCCCCCCCC----CCchHHHHHHHHHHHHHHH
Confidence 356678899999999999999997554 899999998 68865433 5778877666 6899999999999999875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.+.+++++++||+.||||+.. +.++.++..+..+..+.+++++++.++|+|++|+++++..+++
T Consensus 166 -------~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~------- 231 (317)
T TIGR01181 166 -------RTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE------- 231 (317)
T ss_pred -------HHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc-------
Confidence 236899999999999999753 5577888888888878888999999999999999999999986
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 242 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (389)
. ...|++||++++++++++|+++.+.+.+|.+.+..... ... +..
T Consensus 232 ----~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~---------------------------~~~---~~~ 276 (317)
T TIGR01181 232 ----K-GRVGETYNIGGGNERTNLEVVETILELLGKDEDLITHV---------------------------EDR---PGH 276 (317)
T ss_pred ----C-CCCCceEEeCCCCceeHHHHHHHHHHHhCCCccccccc---------------------------CCC---ccc
Confidence 2 23468999999999999999999999998653321100 000 000
Q ss_pred HHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 243 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 243 ~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
......|++|++++|||+|++++++++.++++||+++.
T Consensus 277 ----~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 277 ----DRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDNE 314 (317)
T ss_pred ----hhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 01125799999999999999999999999999998754
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=224.94 Aligned_cols=220 Identities=18% Similarity=0.202 Sum_probs=168.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.|++++|++.++ ++||+||.. +|+.... +.+|+++.. .+.+.|+.||..+|++++++..+
T Consensus 82 ~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~-vy~~~~~-~~~e~~~~~---~p~~~Y~~sK~~~e~~~~~~~~~ 155 (314)
T TIGR02197 82 TDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAA-TYGDGEA-GFREGRELE---RPLNVYGYSKFLFDQYVRRRVLP 155 (314)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHH-hcCCCCC-CcccccCcC---CCCCHHHHHHHHHHHHHHHHhHh
Confidence 46677889999999999999999998 799999998 7986543 345555432 23689999999999999875311
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCccee------cCCCccccceeHHHHHHHHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKI------GEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~------g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
...+++++++||++||||++. ..+..++..+..+....++ ++|++.++|+|++|+++++..++
T Consensus 156 -----~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~ 230 (314)
T TIGR02197 156 -----EALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLL 230 (314)
T ss_pred -----hccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHH
Confidence 124679999999999999864 2355667777777655543 56788899999999999999998
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
+ . ..+++||+++++++|++|+++.+.+.+|.+.+....|.+
T Consensus 231 ~-----------~--~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------------- 271 (314)
T TIGR02197 231 E-----------N--GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMP-------------------------- 271 (314)
T ss_pred h-----------c--ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCc--------------------------
Confidence 7 3 245699999999999999999999999976432222221
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
+.... ........|++|++++|||+|+++++++++++++|+.
T Consensus 272 ~~~~~-----~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 272 EALRG-----KYQYFTQADITKLRAAGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred ccccc-----ccccccccchHHHHHhcCCCCcccHHHHHHHHHHHHh
Confidence 11000 0011225799999999999999999999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-27 Score=228.23 Aligned_cols=236 Identities=18% Similarity=0.187 Sum_probs=175.4
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcc-cCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~-~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
..++...+++|+.++.+++++|++.+ ++++|++||.. +||... ..+.+|+.+..| .++|+.||..+|.++..+
T Consensus 92 ~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~-vyg~~~~~~~~~e~~~~~p----~~~Y~~sK~~~e~~~~~~ 166 (349)
T TIGR02622 92 YADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDK-CYRNDEWVWGYRETDPLGG----HDPYSSSKACAELVIASY 166 (349)
T ss_pred hhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechh-hhCCCCCCCCCccCCCCCC----CCcchhHHHHHHHHHHHH
Confidence 34677889999999999999999887 88999999988 687643 234677776655 789999999999999876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC---CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~---~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.........-.+++++++||++||||++. +.++.++..+..|.... ++++++.++|+|++|+|++++.+++.+.+
T Consensus 167 ~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~- 244 (349)
T TIGR02622 167 RSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFT- 244 (349)
T ss_pred HHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHHHHHHHhh-
Confidence 42100000002799999999999999752 56788889888887654 57889999999999999999998874321
Q ss_pred CCCCCCCCCCCCceEEEeCC--CCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~--~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 238 (389)
.+...+++|||+++ +++++.|+++.+.+.++.....+..+ +.+ .
T Consensus 245 ------~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~---------------------------~~~-~ 290 (349)
T TIGR02622 245 ------GQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDD---------------------------SDL-N 290 (349)
T ss_pred ------cCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeec---------------------------cCC-C
Confidence 11223579999964 79999999999998876321111110 000 0
Q ss_pred CHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 239 LPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 239 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
.+.+.. ....|++|++++|||+|+++++++++++++|+++..+.
T Consensus 291 ~~~~~~----~~~~d~~k~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~ 334 (349)
T TIGR02622 291 HPHEAR----LLKLDSSKARTLLGWHPRWGLEEAVSRTVDWYKAWLRG 334 (349)
T ss_pred CCcccc----eeecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 111111 23679999999999999999999999999999986544
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=246.37 Aligned_cols=221 Identities=22% Similarity=0.299 Sum_probs=176.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCC---CCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVN---GNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~---~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.++..+.++|+.||.|++++|++.+ ++||||+||.. +||.....+ .+|+.+..| .+.|+.||..+|+++..
T Consensus 98 ~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~-vyg~~~~~~~~~~~E~~~~~p----~~~Y~~sK~~aE~~v~~ 172 (668)
T PLN02260 98 GNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDE-VYGETDEDADVGNHEASQLLP----TNPYSATKAGAEMLVMA 172 (668)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchH-HhCCCccccccCccccCCCCC----CCCcHHHHHHHHHHHHH
Confidence 3456788999999999999999987 89999999998 798654322 256666555 68999999999999998
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.. ..+++++++||++||||++. ..++.++..+..|..+.++|++++.++|+|++|+|+++..+++
T Consensus 173 ~~~-------~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~----- 240 (668)
T PLN02260 173 YGR-------SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH----- 240 (668)
T ss_pred HHH-------HcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHh-----
Confidence 752 36899999999999999874 4567888888888888888999999999999999999999886
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
. ...+++||+++++++++.|+++.+.+.+|.+.... +.. .+..+..
T Consensus 241 ------~-~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~-i~~-------------------------~~~~p~~- 286 (668)
T PLN02260 241 ------K-GEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKS-IKF-------------------------VENRPFN- 286 (668)
T ss_pred ------c-CCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcce-eee-------------------------cCCCCCC-
Confidence 2 23467999999999999999999999999753311 000 0110110
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
......|++|++ +|||+|+++++++++++++||+++..
T Consensus 287 ------~~~~~~d~~k~~-~lGw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 287 ------DQRYFLDDQKLK-KLGWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred ------cceeecCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhChh
Confidence 122368999997 69999999999999999999997654
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=220.16 Aligned_cols=215 Identities=15% Similarity=0.117 Sum_probs=167.7
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++..+++|+.+|.|++++|++.|+ ++||+||.. |||+....+.+|+++..| .+.|++||..+|++++.+.
T Consensus 71 ~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~-Vy~~~~~~p~~E~~~~~P----~~~Yg~sK~~~E~~~~~~~- 143 (299)
T PRK09987 71 ESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDY-VFPGTGDIPWQETDATAP----LNVYGETKLAGEKALQEHC- 143 (299)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccce-EECCCCCCCcCCCCCCCC----CCHHHHHHHHHHHHHHHhC-
Confidence 346677889999999999999999997 799999998 799877778899988777 7899999999999998875
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecC--CCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE--PSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~--~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.+.+++||++||||++.++++.+++.+..++.+.++++ +.+..++.++||+++++.++++
T Consensus 144 ----------~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~-------- 205 (299)
T PRK09987 144 ----------AKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALN-------- 205 (299)
T ss_pred ----------CCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhc--------
Confidence 34699999999999877777888888888888888887 6666677778888888887765
Q ss_pred CCCCCCCCCceEEEeCCCCCChHHHHHHHHHhC---CCCCC---ccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL---DYDLP---KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~l---g~~~~---~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+.. +++||+++++++|+.|+++.+.+.+ |.+.+ ...+|... .+.+.
T Consensus 206 ---~~~~-~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~-----------------------~~~~~ 258 (299)
T PRK09987 206 ---KPEV-AGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSA-----------------------YPTPA 258 (299)
T ss_pred ---cCCC-CCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhh-----------------------cCCCC
Confidence 2222 3599999999999999999997764 43321 11222110 01110
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHH
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYW 280 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~ 280 (389)
. -..+...|++|+++.|||+|. +++++|+++++.+
T Consensus 259 ~-------rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~~~~~~ 293 (299)
T PRK09987 259 R-------RPHNSRLNTEKFQQNFALVLP-DWQVGVKRMLTEL 293 (299)
T ss_pred C-------CCCcccCCHHHHHHHhCCCCc-cHHHHHHHHHHHH
Confidence 0 012336899999999999996 9999999998755
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=219.70 Aligned_cols=220 Identities=26% Similarity=0.402 Sum_probs=174.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCC-CCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNES-LPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~-~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
+++.+.++|+.||.|++++|++.+++|+||+||..++++.....+.+|+ .+..| .++|+.||..+|+.++.+..
T Consensus 84 ~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p----~~~Yg~sK~~~E~~~~~~~~- 158 (314)
T COG0451 84 DPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP----LNPYGVSKLAAEQLLRAYAR- 158 (314)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCC----CCHHHHHHHHHHHHHHHHHH-
Confidence 3456899999999999999999999999998888854444233467888 56656 45999999999999999972
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC-----CHHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~-----~~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.+++++++||++||||++.. ....++..+..+.. ....+++.+.++++|++|++++++.+++
T Consensus 159 ------~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~----- 227 (314)
T COG0451 159 ------LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALE----- 227 (314)
T ss_pred ------HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHh-----
Confidence 368999999999999999864 34455666777775 5555788888999999999999999997
Q ss_pred CCCCCCCCCCCCceEEEeCCC-CCChHHHHHHHHHhCCCCCCc-cccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPK-SWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~-~~s~~e~~~~l~~~lg~~~~~-~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 238 (389)
.+.. + .||+++++ +.+++|+.+.+.+.+|...+. ...+.
T Consensus 228 ------~~~~-~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~------------------------------- 268 (314)
T COG0451 228 ------NPDG-G-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL------------------------------- 268 (314)
T ss_pred ------CCCC-c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC-------------------------------
Confidence 2222 3 99999997 999999999999999987552 11110
Q ss_pred CHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 239 LPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 239 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
............|++|++++|||.|+.++++++.++++|+....
T Consensus 269 --~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 269 --GRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred --CCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 00111223447899999999999999899999999999997653
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=222.62 Aligned_cols=220 Identities=19% Similarity=0.199 Sum_probs=167.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC-CCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY-FPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~-~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
++...+++|+.++.|++++|++.+++++|++||.+ +||.....+.+|++|. .| .+.|+.+|..+|+++++++.
T Consensus 92 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-~yg~~~~~~~~E~~~~~~p----~~~Y~~sK~~~E~~~~~~~~- 165 (338)
T PRK10675 92 KPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSAT-VYGDQPKIPYVESFPTGTP----QSPYGKSKLMVEQILTDLQK- 165 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH-hhCCCCCCccccccCCCCC----CChhHHHHHHHHHHHHHHHH-
Confidence 45678899999999999999999999999999988 7987666677888875 34 68999999999999998752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC--------C----CHHHHHHHHHcCC--Ccceec------CCCccccceeHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE--------R----HLPRIVSLAKLGL--VPFKIG------EPSVKTDWIYVDNL 146 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~--------~----~~~~li~~~~~g~--~~~~~g------~~~~~~~~v~vdDl 146 (389)
...+++++++|++.+|||... . .++.+ ..+..+. .+.++| ++.+.++|+|++|+
T Consensus 166 -----~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (338)
T PRK10675 166 -----AQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYI-AQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239 (338)
T ss_pred -----hcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHH-HHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHH
Confidence 114689999999999987321 1 12333 3333332 233333 67888999999999
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhh
Q 016468 147 VLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYP 226 (389)
Q Consensus 147 a~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~ 226 (389)
|++++++++.. .....+++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 240 a~~~~~~~~~~---------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------ 292 (338)
T PRK10675 240 ADGHVAAMEKL---------ANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRR------------------ 292 (338)
T ss_pred HHHHHHHHHhh---------hccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCC------------------
Confidence 99999998621 112235799999999999999999999999976543322210
Q ss_pred ccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 227 WLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+ . +. .....|++|+++++||+|+++++++++++++|++++
T Consensus 293 ---------~---~-~~----~~~~~~~~k~~~~lg~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 293 ---------E---G-DL----PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred ---------C---C-ch----hhhhcCHHHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence 0 0 01 112579999999999999999999999999999885
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-26 Score=221.67 Aligned_cols=220 Identities=20% Similarity=0.182 Sum_probs=159.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc---CCCCCCCCCC--CCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI---VNGNESLPYF--PIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~---~~~~E~~p~~--p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++.++++|+.||.|++++|++.+++|+||+||..++||.... ...+|+++.. ....+.+.|+.||..+|++++
T Consensus 94 ~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~ 173 (342)
T PLN02214 94 DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAW 173 (342)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999998768975332 2467775211 011236789999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC----HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~----~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.. +.+++++++||++||||+.... +..++. +..|... .. +++.++||||+|+|++++++++
T Consensus 174 ~~~~-------~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~-~~~g~~~-~~--~~~~~~~i~V~Dva~a~~~al~-- 240 (342)
T PLN02214 174 ETAK-------EKGVDLVVLNPVLVLGPPLQPTINASLYHVLK-YLTGSAK-TY--ANLTQAYVDVRDVALAHVLVYE-- 240 (342)
T ss_pred HHHH-------HcCCcEEEEeCCceECCCCCCCCCchHHHHHH-HHcCCcc-cC--CCCCcCeeEHHHHHHHHHHHHh--
Confidence 9852 3689999999999999986521 233333 3345432 22 3567899999999999999997
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+. .++.||+++ .++++.|+++.+.+.++.. .+|... .. ...+.
T Consensus 241 ---------~~~-~~g~yn~~~-~~~~~~el~~~i~~~~~~~----~~~~~~-------------------~~--~~~~~ 284 (342)
T PLN02214 241 ---------APS-ASGRYLLAE-SARHRGEVVEILAKLFPEY----PLPTKC-------------------KD--EKNPR 284 (342)
T ss_pred ---------Ccc-cCCcEEEec-CCCCHHHHHHHHHHHCCCC----CCCCCC-------------------cc--ccCCC
Confidence 333 345899987 5789999999999998521 122110 00 00000
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
.....+|++|++ +|||+|+ +++++|+++++|+++.+.-
T Consensus 285 ---------~~~~~~d~~k~~-~LG~~p~-~lee~i~~~~~~~~~~~~~ 322 (342)
T PLN02214 285 ---------AKPYKFTNQKIK-DLGLEFT-STKQSLYDTVKSLQEKGHL 322 (342)
T ss_pred ---------CCccccCcHHHH-HcCCccc-CHHHHHHHHHHHHHHcCCC
Confidence 112358999998 5999995 9999999999999986543
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=220.57 Aligned_cols=216 Identities=18% Similarity=0.159 Sum_probs=167.0
Q ss_pred hhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 016468 17 INGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCL 96 (389)
Q Consensus 17 v~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl 96 (389)
..++++++++|++.|++||||+||.+ +|+.....+.+|+++..| +. +|..+|+++.+. ++
T Consensus 142 ~~~~~~ll~aa~~~gvkr~V~~SS~~-vyg~~~~~p~~E~~~~~p-------~~-sK~~~E~~l~~~-----------~l 201 (378)
T PLN00016 142 LDEVEPVADWAKSPGLKQFLFCSSAG-VYKKSDEPPHVEGDAVKP-------KA-GHLEVEAYLQKL-----------GV 201 (378)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEccHh-hcCCCCCCCCCCCCcCCC-------cc-hHHHHHHHHHHc-----------CC
Confidence 66799999999999999999999998 698765556677766544 22 899999988643 58
Q ss_pred eEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceE
Q 016468 97 YTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPY 175 (389)
Q Consensus 97 ~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y 175 (389)
+++++||+.+|||+... ....++..+..+.+..++|++.+.++|+|++|+|++++.+++ .+...|++|
T Consensus 202 ~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~-----------~~~~~~~~y 270 (378)
T PLN00016 202 NWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVG-----------NPKAAGQIF 270 (378)
T ss_pred CeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhc-----------CccccCCEE
Confidence 99999999999997654 345667778888877788999999999999999999999987 444567899
Q ss_pred EEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchH
Q 016468 176 FVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLL 255 (389)
Q Consensus 176 ~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 255 (389)
|+++++++|+.|+++.+.+.+|.+......+.... +. ..+ ...|. .......|++
T Consensus 271 ni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~-------~~--------~~~--~~~p~--------~~~~~~~d~~ 325 (378)
T PLN00016 271 NIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAV-------GF--------GAK--KAFPF--------RDQHFFASPR 325 (378)
T ss_pred EecCCCccCHHHHHHHHHHHhCCCCceeecCcccc-------Cc--------ccc--ccccc--------cccccccCHH
Confidence 99999999999999999999998754332221100 00 000 00000 0112246999
Q ss_pred HHHHhCCCCCCCChHHHHHHHHHHHHHcccCCC
Q 016468 256 KAKDELCYVPIVSPREGMAATISYWQDRKRKSL 288 (389)
Q Consensus 256 ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~~ 288 (389)
|++++|||+|+++++++|+++++||+++++.+.
T Consensus 326 ka~~~LGw~p~~~l~egl~~~~~~~~~~~~~~~ 358 (378)
T PLN00016 326 KAKEELGWTPKFDLVEDLKDRYELYFGRGRDRK 358 (378)
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999999998776543
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=204.80 Aligned_cols=225 Identities=20% Similarity=0.240 Sum_probs=182.7
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC-CCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY-FPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~-~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..++-.++..|+.||.|++-.|++.| +||+++||.. |||.+...+-.|+-.- .-...+.+-|...|..+|.++-.++
T Consensus 108 ~~npvktIktN~igtln~lglakrv~-aR~l~aSTse-VYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~ 185 (350)
T KOG1429|consen 108 KYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSE-VYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYH 185 (350)
T ss_pred ccCccceeeecchhhHHHHHHHHHhC-ceEEEeeccc-ccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhh
Confidence 46788899999999999999999999 6999999999 7999776665554211 0113347899999999999999998
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
++.|+.+.|.|+.++|||... +.+.-++.++..+.++.++|+|.|.++|.||+|++++++++++
T Consensus 186 -------k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~----- 253 (350)
T KOG1429|consen 186 -------KQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLME----- 253 (350)
T ss_pred -------cccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhc-----
Confidence 558999999999999999543 6677888888899999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
++ .. ..+||++++.+|+.|+++.+.+..|-...+...+ +. +
T Consensus 254 ------s~-~~-~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~---------------------------~~----~ 294 (350)
T KOG1429|consen 254 ------SD-YR-GPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVE---------------------------NG----P 294 (350)
T ss_pred ------CC-Cc-CCcccCCccceeHHHHHHHHHHHcCCCcceeecC---------------------------CC----C
Confidence 22 22 3489999999999999999999996543322211 11 1
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccCC
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~ 287 (389)
+.. ..+..|++++++.|||.|.++++++|..|+.|++++....
T Consensus 295 Ddp----~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~~ 337 (350)
T KOG1429|consen 295 DDP----RKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRERIARE 337 (350)
T ss_pred CCc----cccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHHH
Confidence 111 2236899999999999999999999999999999865443
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=208.66 Aligned_cols=216 Identities=19% Similarity=0.154 Sum_probs=165.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+++..+++|+.++.|++++|++.++ |+||+||.+ +|++....+.+|+++..| .+.|+++|..+|+.++.+
T Consensus 69 ~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~-vy~~~~~~~~~E~~~~~~----~~~Y~~~K~~~E~~~~~~---- 138 (287)
T TIGR01214 69 DPEKAFAVNALAPQNLARAAARHGA-RLVHISTDY-VFDGEGKRPYREDDATNP----LNVYGQSKLAGEQAIRAA---- 138 (287)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeee-eecCCCCCCCCCCCCCCC----cchhhHHHHHHHHHHHHh----
Confidence 4567889999999999999999886 899999988 798776667888887665 689999999999999876
Q ss_pred CCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
+.+++++||++||||++. ..+..++..+..+..+...++ +..+++|++|+|+++..+++
T Consensus 139 -------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~a~~~~~~----------- 198 (287)
T TIGR01214 139 -------GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDD--QIGSPTYAKDLARVIAALLQ----------- 198 (287)
T ss_pred -------CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecC--CCcCCcCHHHHHHHHHHHHh-----------
Confidence 368999999999999863 456677887777766655554 67899999999999999997
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHh
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (389)
.+...+++||+++++++++.|+++.+.+.+|.+......|.. ..... . . .+.+...
T Consensus 199 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--~~~~~--~----~---------~~~~~~~------- 254 (287)
T TIGR01214 199 RLARARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEV--KPISS--K----E---------YPRPARR------- 254 (287)
T ss_pred hccCCCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCcee--EeecH--H----H---------cCCCCCC-------
Confidence 333457799999999999999999999999976432222210 00000 0 0 0111000
Q ss_pred ccccccchHHHHHhCCCCCCCChHHHHHHHHH
Q 016468 247 GVTHYFSLLKAKDELCYVPIVSPREGMAATIS 278 (389)
Q Consensus 247 ~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~ 278 (389)
.....+|++|++++|||++ +++++++.++++
T Consensus 255 ~~~~~~d~~~~~~~lg~~~-~~~~~~l~~~~~ 285 (287)
T TIGR01214 255 PAYSVLDNTKLVKTLGTPL-PHWREALRAYLQ 285 (287)
T ss_pred CCccccchHHHHHHcCCCC-ccHHHHHHHHHh
Confidence 1223689999999999965 499999998875
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-25 Score=212.09 Aligned_cols=222 Identities=19% Similarity=0.208 Sum_probs=169.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++...+++|+.++.+++++|.+.+++++|++||.. +||.....+.+|+++..| .+.|+.+|..+|+.+..+..
T Consensus 88 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~-~~g~~~~~~~~e~~~~~~----~~~y~~sK~~~e~~~~~~~~- 161 (328)
T TIGR01179 88 QDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAA-VYGEPSSIPISEDSPLGP----INPYGRSKLMSERILRDLSK- 161 (328)
T ss_pred cCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchh-hcCCCCCCCccccCCCCC----CCchHHHHHHHHHHHHHHHH-
Confidence 355667889999999999999999999999999988 688766667788887766 68999999999999998752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC-----------CHHHHHHHHH-cCCCccee------cCCCccccceeHHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAK-LGLVPFKI------GEPSVKTDWIYVDNLVL 148 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~-----------~~~~li~~~~-~g~~~~~~------g~~~~~~~~v~vdDla~ 148 (389)
...+++++++||+.||||.... .++.+..... .......+ +++++.++|||++|+++
T Consensus 162 -----~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~ 236 (328)
T TIGR01179 162 -----ADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLAD 236 (328)
T ss_pred -----hccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHH
Confidence 1157999999999999985321 2334444443 22222222 35678899999999999
Q ss_pred HHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcc
Q 016468 149 ALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWL 228 (389)
Q Consensus 149 a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~ 228 (389)
++..+++... ....+++||+++++++|++|+++.+.+.+|.+.+....|..
T Consensus 237 ~~~~~~~~~~---------~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~-------------------- 287 (328)
T TIGR01179 237 AHLAALEYLL---------NGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR-------------------- 287 (328)
T ss_pred HHHHHHhhhh---------cCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC--------------------
Confidence 9999986321 12346899999999999999999999999976543322210
Q ss_pred ccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCC-hHHHHHHHHHHHHHc
Q 016468 229 NRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDR 283 (389)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~s-l~~~l~~~v~~~~~~ 283 (389)
.. +. .....|++|++++|||+|+++ ++++++++++|++++
T Consensus 288 -----~~------~~----~~~~~~~~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 288 -----PG------DP----ASLVADASKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred -----Cc------cc----cchhcchHHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 00 00 122469999999999999997 999999999999764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=210.67 Aligned_cols=218 Identities=18% Similarity=0.222 Sum_probs=159.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCc----ccCCCCCCCCCCCC--CCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGK----EIVNGNESLPYFPI--DEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~----~~~~~~E~~p~~p~--~~~~~~Y~~SK~~aE~~ 79 (389)
.++...+++|+.|+.|++++|.+. +++|+|++||..++++.. +..+.+|+.+..|. ..+.+.|+.||..+|++
T Consensus 95 ~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~ 174 (325)
T PLN02989 95 DPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDA 174 (325)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHH
Confidence 345678899999999999999986 688999999998544432 23356888776552 12246899999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCC---CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~---~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
++.+. ++.+++++++||+++|||+... ....++..+..|.... + .+.++|+|++|+|++++.+++
T Consensus 175 ~~~~~-------~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a~~~~l~- 242 (325)
T PLN02989 175 AWRFA-------KDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALAHVKALE- 242 (325)
T ss_pred HHHHH-------HHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHHHHHHhc-
Confidence 99876 2368999999999999998653 3445566666665332 2 345799999999999999987
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (389)
.+.. ++.||++ ++++|++|+++.+.+.++.. . ++. ...
T Consensus 243 ----------~~~~-~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~---~~~--------------------------~~~ 280 (325)
T PLN02989 243 ----------TPSA-NGRYIID-GPVVTIKDIENVLREFFPDL-C---IAD--------------------------RNE 280 (325)
T ss_pred ----------Cccc-CceEEEe-cCCCCHHHHHHHHHHHCCCC-C---CCC--------------------------CCC
Confidence 3322 4589995 56899999999999998631 1 100 000
Q ss_pred CCCHHHHHHh-ccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 237 LILPAEVYKV-GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 237 ~~~~~~~~~~-~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+.... ......|++|+++ |||.|.++++++|+++++|+++.+
T Consensus 281 -----~~~~~~~~~~~~~~~k~~~-lg~~p~~~l~~gi~~~~~~~~~~~ 323 (325)
T PLN02989 281 -----DITELNSVTFNVCLDKVKS-LGIIEFTPTETSLRDTVLSLKEKC 323 (325)
T ss_pred -----CcccccccCcCCCHHHHHH-cCCCCCCCHHHHHHHHHHHHHHhC
Confidence 00000 1123678999885 999999999999999999998654
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=207.58 Aligned_cols=214 Identities=22% Similarity=0.214 Sum_probs=156.3
Q ss_pred hhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCce-ecCCcc---cCCCCCCCCCCCC--CCCCCcHHHHHHHHHHHHHHh
Q 016468 11 RVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNV-VFGGKE---IVNGNESLPYFPI--DEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~v-vyg~~~---~~~~~E~~p~~p~--~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++++|+.||.|++++|++. +++|+||+||.++ +|++.+ ..+.+|+.+..|. ....+.|+.||..+|++++.+
T Consensus 97 ~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~ 176 (322)
T PLN02662 97 ELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKF 176 (322)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHH
Confidence 78899999999999999998 8999999999864 476432 2346777655441 112358999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC---CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~---~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
. ++.+++++++||++||||+... ..+..+..+..|... .+.+.++|+|++|+|++++.+++
T Consensus 177 ~-------~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~a~~~~~~----- 240 (322)
T PLN02662 177 A-------KENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT----FPNASYRWVDVRDVANAHIQAFE----- 240 (322)
T ss_pred H-------HHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc----CCCCCcCeEEHHHHHHHHHHHhc-----
Confidence 5 2368999999999999997642 344455555555431 23567899999999999999987
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
.+...| .||++ +++++++|+++.+.+.++.. .+|... .. ..+.
T Consensus 241 ------~~~~~~-~~~~~-g~~~s~~e~~~~i~~~~~~~----~~~~~~-------------------~~---~~~~--- 283 (322)
T PLN02662 241 ------IPSASG-RYCLV-ERVVHYSEVVKILHELYPTL----QLPEKC-------------------AD---DKPY--- 283 (322)
T ss_pred ------CcCcCC-cEEEe-CCCCCHHHHHHHHHHHCCCC----CCCCCC-------------------CC---cccc---
Confidence 333334 68887 57899999999999987632 112110 00 0010
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
......|++|+++ |||+|. +++++++++++||++++.
T Consensus 284 ------~~~~~~d~~k~~~-lg~~~~-~~~~~l~~~~~~~~~~~~ 320 (322)
T PLN02662 284 ------VPTYQVSKEKAKS-LGIEFI-PLEVSLKDTVESLKEKGF 320 (322)
T ss_pred ------ccccccChHHHHH-hCCccc-cHHHHHHHHHHHHHHcCC
Confidence 0123689999995 999985 999999999999988654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-24 Score=207.78 Aligned_cols=216 Identities=17% Similarity=0.118 Sum_probs=152.8
Q ss_pred hhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcc----cCCCCCCCCC-----CCCCCCCCcHHHHHHHHHHHH
Q 016468 11 RVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKE----IVNGNESLPY-----FPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~----~~~~~E~~p~-----~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.++++|+.|+.|++++|.+. +++|+|++||.. +||... ..+.+|+... .....+.++|+.||..+|+++
T Consensus 101 ~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~-~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~ 179 (338)
T PLN00198 101 DMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA-AVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAA 179 (338)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccEEEEeecce-eeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHH
Confidence 46789999999999999887 699999999998 576432 2233443210 001123678999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHH---HHHHHHcCCCcceec-CCCc----cccceeHHHHHHHHHH
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPR---IVSLAKLGLVPFKIG-EPSV----KTDWIYVDNLVLALIL 152 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~---li~~~~~g~~~~~~g-~~~~----~~~~v~vdDla~a~~~ 152 (389)
+.+.. ..+++++++||++||||++....+. ++..+..++...+.| ++.+ .++|+||+|+|++++.
T Consensus 180 ~~~~~-------~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~ 252 (338)
T PLN00198 180 WKFAE-------ENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIF 252 (338)
T ss_pred HHHHH-------hcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHH
Confidence 99863 3689999999999999986432222 334455666554444 3322 3799999999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW 232 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~ 232 (389)
+++ .+.. ++.| +++++++++.|+++.+.+.++.. .+|...
T Consensus 253 ~~~-----------~~~~-~~~~-~~~~~~~s~~el~~~i~~~~~~~----~~~~~~----------------------- 292 (338)
T PLN00198 253 LAE-----------KESA-SGRY-ICCAANTSVPELAKFLIKRYPQY----QVPTDF----------------------- 292 (338)
T ss_pred Hhh-----------CcCc-CCcE-EEecCCCCHHHHHHHHHHHCCCC----CCCccc-----------------------
Confidence 986 2222 3357 56677899999999999887531 111110
Q ss_pred CCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 233 LPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
...+. ......|++|+++ +||+|+++++++|+++++||++++
T Consensus 293 ~~~~~---------~~~~~~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 293 GDFPS---------KAKLIISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred cccCC---------CCccccChHHHHh-CCceecCcHHHHHHHHHHHHHHcC
Confidence 00010 0123579999987 699999999999999999999754
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=208.51 Aligned_cols=219 Identities=17% Similarity=0.153 Sum_probs=151.4
Q ss_pred hhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCC-CCCCCCCC-----CCCCCCCcHHHHHHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVN-GNESLPYF-----PIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~-~~E~~p~~-----p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.++++|+.||.|++++|++.+ ++||||+||.+++|+.....+ .+|+.... +...+.++|+.||..+|++++.
T Consensus 97 ~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 176 (351)
T PLN02650 97 NEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWK 176 (351)
T ss_pred hhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHH
Confidence 4688999999999999999987 899999999975443322222 35553210 1111246899999999999999
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHH--HcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLA--KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~--~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.. +.+++++++||++||||+.... .+.++..+ ..+... .++. .+.++|+||+|+|++++.+++
T Consensus 177 ~~~-------~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~r~~v~V~Dva~a~~~~l~---- 243 (351)
T PLN02650 177 YAA-------ENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEA-HYSI-IKQGQFVHLDDLCNAHIFLFE---- 243 (351)
T ss_pred HHH-------HcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCcc-ccCc-CCCcceeeHHHHHHHHHHHhc----
Confidence 862 3689999999999999986532 22333322 223321 1222 234799999999999999986
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
.+.. +..| +++++++++.|+++.+.+.++.. .+|... +..
T Consensus 244 -------~~~~-~~~~-i~~~~~~s~~el~~~i~~~~~~~----~~~~~~------------------------~~~--- 283 (351)
T PLN02650 244 -------HPAA-EGRY-ICSSHDATIHDLAKMLREKYPEY----NIPARF------------------------PGI--- 283 (351)
T ss_pred -------CcCc-CceE-EecCCCcCHHHHHHHHHHhCccc----CCCCCC------------------------CCc---
Confidence 3322 3367 67778899999999999987621 111100 000
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
+.+. .....|++|++ +|||+|+++++++|+++++||++.+..
T Consensus 284 ~~~~----~~~~~d~~k~~-~lG~~p~~~l~egl~~~i~~~~~~~~~ 325 (351)
T PLN02650 284 DEDL----KSVEFSSKKLT-DLGFTFKYSLEDMFDGAIETCREKGLI 325 (351)
T ss_pred Cccc----ccccCChHHHH-HhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 0001 12256888875 799999999999999999999886644
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-23 Score=202.13 Aligned_cols=214 Identities=19% Similarity=0.186 Sum_probs=155.5
Q ss_pred hhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCcee-cCCcc---cCCCCCCCCCCCC--CCCCCcHHHHHHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVV-FGGKE---IVNGNESLPYFPI--DEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vv-yg~~~---~~~~~E~~p~~p~--~~~~~~Y~~SK~~aE~~l~~ 82 (389)
...+++|+.||.|++++|++. +++|+|++||.+++ |+..+ ....+|+.+..|. ..+.+.|+.||..+|+++++
T Consensus 97 ~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~ 176 (322)
T PLN02986 97 TELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWE 176 (322)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHH
Confidence 357899999999999999986 79999999998754 34322 2345676544331 12357899999999999999
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC---CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~---~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.. +.+++++++||+.||||+... ....++..+..|... ++ .+.++|||++|+|++++.+++
T Consensus 177 ~~~-------~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~al~---- 241 (322)
T PLN02986 177 FAK-------DNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKALE---- 241 (322)
T ss_pred HHH-------HhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHHhc----
Confidence 863 368999999999999997542 234556666666642 23 566899999999999999997
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
.+... +.||++ ++++|+.|+++.+.+.++. . .+|. ..+
T Consensus 242 -------~~~~~-~~yni~-~~~~s~~e~~~~i~~~~~~-~---~~~~--------------------------~~~--- 279 (322)
T PLN02986 242 -------TPSAN-GRYIID-GPIMSVNDIIDILRELFPD-L---CIAD--------------------------TNE--- 279 (322)
T ss_pred -------CcccC-CcEEEe-cCCCCHHHHHHHHHHHCCC-C---CCCC--------------------------CCc---
Confidence 33333 489995 5689999999999999862 1 1111 000
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+.+.. ......|++|++ +|||+|+ ++++++.++++||++.+
T Consensus 280 ~~~~~--~~~~~~d~~~~~-~lg~~~~-~l~e~~~~~~~~~~~~~ 320 (322)
T PLN02986 280 ESEMN--EMICKVCVEKVK-NLGVEFT-PMKSSLRDTILSLKEKC 320 (322)
T ss_pred ccccc--ccCCccCHHHHH-HcCCccc-CHHHHHHHHHHHHHHcC
Confidence 00110 011237899986 4999997 99999999999998753
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=205.51 Aligned_cols=218 Identities=23% Similarity=0.230 Sum_probs=159.3
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+..+++..+++|+.++.+|.++|.+.|+ ++||+||.. ||+|....+.+|+++..| .+.||++|..+|+.+++..
T Consensus 67 ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~-VFdG~~~~~y~E~d~~~P----~~~YG~~K~~~E~~v~~~~ 140 (286)
T PF04321_consen 67 CEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDY-VFDGDKGGPYTEDDPPNP----LNVYGRSKLEGEQAVRAAC 140 (286)
T ss_dssp HHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGG-GS-SSTSSSB-TTS--------SSHHHHHHHHHHHHHHHH-
T ss_pred hhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccE-EEcCCcccccccCCCCCC----CCHHHHHHHHHHHHHHHhc
Confidence 4567899999999999999999999998 899999999 799988878899998888 7999999999999999975
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
-+.+|+|++.+||+...+++..+++.+..++.+..+. ++..+++|++|+|+++..++++...
T Consensus 141 -----------~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~----- 202 (286)
T PF04321_consen 141 -----------PNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLS----- 202 (286)
T ss_dssp -----------SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-----
T ss_pred -----------CCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhccc-----
Confidence 3789999999999977777889999999998776654 5678999999999999999984221
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC-ccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV 243 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~-~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (389)
+....++||+++++.+|..|+++.+.+.+|.+.+ ..+++.. + ... .
T Consensus 203 ---~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~--------------------------~--~~~--~ 249 (286)
T PF04321_consen 203 ---GASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSS--------------------------E--FPR--A 249 (286)
T ss_dssp ----GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESST--------------------------T--STT--S
T ss_pred ---ccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccc--------------------------c--CCC--C
Confidence 1223579999999999999999999999998863 3333221 0 000 0
Q ss_pred HHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHH
Q 016468 244 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYW 280 (389)
Q Consensus 244 ~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~ 280 (389)
.....+...|++|+++.+|.+++ +++++|++.++.|
T Consensus 250 ~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 250 APRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVKQY 285 (286)
T ss_dssp SGS-SBE-B--HHHHHCTTS----BHHHHHHHHHHHH
T ss_pred CCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHHHh
Confidence 11123457999999999999998 9999999998765
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF14934 DUF4499: Domain of unknown function (DUF4499) | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.3e-24 Score=166.16 Aligned_cols=85 Identities=34% Similarity=0.514 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhcCC--CCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CccchhhHHHHHHH
Q 016468 299 CLIGLPALFATAYLPD--IGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKV--DPANAKGWFWQTLA 374 (389)
Q Consensus 299 ~~~~~~~~~~~~~lp~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 374 (389)
....++.+|...++|. +|| +...+++++++++.++|++|++||++|++||+||++||+|. |++|+++||+|||+
T Consensus 3 ~~~~~~~vf~p~~~P~~~lgp--lg~f~~~~~~~~~~~~~~~~~~a~~iHv~Ea~yA~~Lc~~~gi~~~~~~~W~~qTfl 80 (91)
T PF14934_consen 3 LGYFMWVVFWPASIPYQSLGP--LGSFVQYLVFRSPFLLRLGFWFAWLIHVGEALYAFYLCRKKGISFSNRLLWFLQTFL 80 (91)
T ss_pred hHHHHHHHHhcccCCHHHcCc--HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHHHH
Confidence 3456677888888888 888 44449999999999999999999999999999999999995 99999999999999
Q ss_pred HhhhhHHHHHh
Q 016468 375 LGVFSLRLLLK 385 (389)
Q Consensus 375 ~~~~~~~~~~~ 385 (389)
||||||++|+|
T Consensus 81 ~G~~SL~~LlK 91 (91)
T PF14934_consen 81 FGFPSLSLLLK 91 (91)
T ss_pred hHHHHHHHHhC
Confidence 99999999987
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.4e-23 Score=201.22 Aligned_cols=216 Identities=19% Similarity=0.165 Sum_probs=149.5
Q ss_pred hhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCccc-----CCCCCCCCCCCC------CCCCCcHHHHHHHHHHH
Q 016468 12 VDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEI-----VNGNESLPYFPI------DEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~-----~~~~E~~p~~p~------~~~~~~Y~~SK~~aE~~ 79 (389)
++++|+.|+.|++++|++.+ ++|||++||.. +||..+. .+.+|+.+ .|. ..+.++|+.||..+|++
T Consensus 109 ~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~~~~~E~~~-~p~~~~~~~~~~~~~Y~~sK~~~E~~ 186 (353)
T PLN02896 109 VIDPAIKGTLNVLKSCLKSKTVKRVVFTSSIS-TLTAKDSNGRWRAVVDETCQ-TPIDHVWNTKASGWVYVLSKLLTEEA 186 (353)
T ss_pred hHHHHHHHHHHHHHHHHhcCCccEEEEEechh-hccccccCCCCCCccCcccC-CcHHHhhccCCCCccHHHHHHHHHHH
Confidence 34455699999999999885 89999999998 6875421 23566522 111 12346899999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHH---cCCCc--ceecCC---CccccceeHHHHHHHHH
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK---LGLVP--FKIGEP---SVKTDWIYVDNLVLALI 151 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~---~g~~~--~~~g~~---~~~~~~v~vdDla~a~~ 151 (389)
+..+. +..+++++++||++||||+....++.++..+. .|... ...+.. ...++|+|++|+|++++
T Consensus 187 ~~~~~-------~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~ 259 (353)
T PLN02896 187 AFKYA-------KENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHI 259 (353)
T ss_pred HHHHH-------HHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHH
Confidence 99986 33689999999999999987644444443333 34321 111211 12469999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
.+++ .+.. +..|+ ++++++++.|+++.+.+.++.....+...
T Consensus 260 ~~l~-----------~~~~-~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~------------------------- 301 (353)
T PLN02896 260 FLME-----------QTKA-EGRYI-CCVDSYDMSELINHLSKEYPCSNIQVRLD------------------------- 301 (353)
T ss_pred HHHh-----------CCCc-CccEE-ecCCCCCHHHHHHHHHHhCCCCCcccccc-------------------------
Confidence 9987 2222 33674 56788999999999999987321111100
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+ +.. . ......|++|++ +|||+|+++++++|+++++||++++-
T Consensus 302 --~-~~~-~------~~~~~~~~~~~~-~lGw~p~~~l~~~i~~~~~~~~~~~~ 344 (353)
T PLN02896 302 --E-EKR-G------SIPSEISSKKLR-DLGFEYKYGIEEIIDQTIDCCVDHGF 344 (353)
T ss_pred --c-ccc-C------ccccccCHHHHH-HcCCCccCCHHHHHHHHHHHHHHCCC
Confidence 0 000 0 011245888887 59999999999999999999998765
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=210.86 Aligned_cols=247 Identities=18% Similarity=0.072 Sum_probs=180.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+.+...++|+.||.|++++|++.+++++||+||.. +||.... +.+|+....+ ..+.+.|++||..+|+++.+.
T Consensus 93 ~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~-v~g~~~~-~~~e~~~~~~-~~~~~~Y~~sK~~~E~~~~~~---- 165 (657)
T PRK07201 93 DEEAQRAANVDGTRNVVELAERLQAATFHHVSSIA-VAGDYEG-VFREDDFDEG-QGLPTPYHRTKFEAEKLVREE---- 165 (657)
T ss_pred CHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccc-cccCccC-ccccccchhh-cCCCCchHHHHHHHHHHHHHc----
Confidence 44567899999999999999999999999999998 6875433 3344432211 223578999999999999864
Q ss_pred CCCCCCCCceEEEEecCceecCCCCCC---------HHHHHHHHHcC-CCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLG-LVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~~---------~~~li~~~~~g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+++++++||+.||||+..+. +..++..+... ...+.++++....+++|+||+++++..+++
T Consensus 166 ------~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~-- 237 (657)
T PRK07201 166 ------CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH-- 237 (657)
T ss_pred ------CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc--
Confidence 469999999999999865421 11223322221 223445666778899999999999999886
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCC---CccccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDL---PKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~---~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
.+...|++||+++++++++.|+++.+.+.+|.+. +...+|.++...+..+.+........+ ..
T Consensus 238 ---------~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-----~~ 303 (657)
T PRK07201 238 ---------KDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAV-----AT 303 (657)
T ss_pred ---------CcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHH-----HH
Confidence 3445688999999999999999999999999887 667788887766655322221111000 02
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhC---CCCCCCChHHHHHHHHHHHHHcc
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDEL---CYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~L---G~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
...+.+..+.....+..||+++++++| |+.+. ++++.+.+.++||.++.
T Consensus 304 ~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~ 355 (657)
T PRK07201 304 QLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHL 355 (657)
T ss_pred hcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcC
Confidence 233446667777777799999999998 66555 67899999999997753
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-22 Score=185.32 Aligned_cols=212 Identities=21% Similarity=0.189 Sum_probs=173.3
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
++.+++..+.+|..|+.||.++|.+.|. ++||+||.. ||+|....++.|+++..| .+.||+||..+|+.++++.
T Consensus 66 aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDy-VFDG~~~~~Y~E~D~~~P----~nvYG~sKl~GE~~v~~~~ 139 (281)
T COG1091 66 AESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDY-VFDGEKGGPYKETDTPNP----LNVYGRSKLAGEEAVRAAG 139 (281)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecce-EecCCCCCCCCCCCCCCC----hhhhhHHHHHHHHHHHHhC
Confidence 4567889999999999999999999999 799999999 799999889999999888 7999999999999999985
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
-+..|+|.+.+||....+++..+++.++.|+.+.... +|..+++++.|+|+++..++..
T Consensus 140 -----------~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~-------- 198 (281)
T COG1091 140 -----------PRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEK-------- 198 (281)
T ss_pred -----------CCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhc--------
Confidence 5679999999999988888889999999998776554 5778899999999999999862
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCcc-ccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS-WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV 243 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~-~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (389)
...+.+||+++...+|+.||++.+.+.+|.+.... ..+.. -.+.+ ..+
T Consensus 199 ----~~~~~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~-----------------------~~~~~-a~R--- 247 (281)
T COG1091 199 ----EKEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASA-----------------------EYPTP-AKR--- 247 (281)
T ss_pred ----cccCcEEEEeCCCcccHHHHHHHHHHHhCCCcccccccccc-----------------------ccCcc-CCC---
Confidence 22344999999888999999999999998665322 11100 00000 000
Q ss_pred HHhccccccchHHHHHhCCCCCCCChHHHHHHHHH
Q 016468 244 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATIS 278 (389)
Q Consensus 244 ~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~ 278 (389)
-.+...|+.|+++.+|+.|+ +++++++++++
T Consensus 248 ---P~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~ 278 (281)
T COG1091 248 ---PANSSLDTKKLEKAFGLSLP-EWREALKALLD 278 (281)
T ss_pred ---CcccccchHHHHHHhCCCCc-cHHHHHHHHHh
Confidence 11236899999999999998 89999988765
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=187.96 Aligned_cols=226 Identities=21% Similarity=0.231 Sum_probs=179.6
Q ss_pred cccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCC-CCCCCCCcHHHHHHHHHHHHHH
Q 016468 4 KEMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF-PIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 4 ~~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~-p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
-.+.++..++..|+.||.|++++|++++++.+|+.||+. |||.....+++|+.|.. | .++|++||...|+++..
T Consensus 92 eS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssat-vYG~p~~ip~te~~~t~~p----~~pyg~tK~~iE~i~~d 166 (343)
T KOG1371|consen 92 ESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSAT-VYGLPTKVPITEEDPTDQP----TNPYGKTKKAIEEIIHD 166 (343)
T ss_pred hhhhCchhheehhhhhHHHHHHHHHHcCCceEEEeccee-eecCcceeeccCcCCCCCC----CCcchhhhHHHHHHHHh
Confidence 456788899999999999999999999999999999998 79999999999998876 5 89999999999999999
Q ss_pred hCCCCCCCCCCCCceEEEEecCceec--CCC----C------CCHHHHHHHHH--------cCCCcceecCCCcccccee
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYG--PGE----E------RHLPRIVSLAK--------LGLVPFKIGEPSVKTDWIY 142 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyG--p~~----~------~~~~~li~~~~--------~g~~~~~~g~~~~~~~~v~ 142 (389)
.+. ..+..++.||..+++| |.. + +.+|.+.+.+. -|.. +...||+..++++|
T Consensus 167 ~~~-------~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d-~~t~dgt~vrdyi~ 238 (343)
T KOG1371|consen 167 YNK-------AYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRD-YTTIDGTIVRDYIH 238 (343)
T ss_pred hhc-------cccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCc-ccccCCCeeeccee
Confidence 984 3568999999999999 422 1 22333322221 1222 22346789999999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHH
Q 016468 143 VDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYS 222 (389)
Q Consensus 143 vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~ 222 (389)
+-|+|+.++.|++.+.. ...-.+||.+++.+.++.|+.+.+.+..|.+.+...+|.+
T Consensus 239 v~Dla~~h~~al~k~~~---------~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R-------------- 295 (343)
T KOG1371|consen 239 VLDLADGHVAALGKLRG---------AAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRR-------------- 295 (343)
T ss_pred eEehHHHHHHHhhcccc---------chheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCC--------------
Confidence 99999999999985432 1223399999999999999999999999988775433321
Q ss_pred HhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 223 VLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
+..+ ...+.+.+++++||||+|.+++++.+++.+.|..++...
T Consensus 296 -----------------~gdv----~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 296 -----------------NGDV----AFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred -----------------CCCc----eeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCCCc
Confidence 1111 123789999999999999999999999999999886553
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=177.91 Aligned_cols=225 Identities=16% Similarity=0.177 Sum_probs=178.5
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC-CCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY-FPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~-~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
...+.+++..|+....|++..|.++|++++|++.|.+ +|+.....|+||++-. .|++.....|+..|.+++-.-..|.
T Consensus 73 ~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStC-IfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~ 151 (315)
T KOG1431|consen 73 NTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTC-IFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYR 151 (315)
T ss_pred CCCchHHHhhcceechhHHHHHHHhchhhhhhhccee-ecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999 8999999999998733 2444456789999999987777776
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHH----HcCC-CcceecCCCccccceeHHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLA----KLGL-VPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~----~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
.+.|-..+.+-|.+||||.++ ..+|.++..+ ..|- .+.++|.|...++|+|++|+|++++..
T Consensus 152 -------~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~v 224 (315)
T KOG1431|consen 152 -------QQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWV 224 (315)
T ss_pred -------HHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHH
Confidence 457889999999999999876 3477777655 3343 678899999999999999999999999
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCC--CCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGF--PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~--~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
+.+. ..-+..+++.|+ .+|++|.++.+.+++|+......=-
T Consensus 225 lr~Y------------~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~Dt------------------------- 267 (315)
T KOG1431|consen 225 LREY------------EGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDT------------------------- 267 (315)
T ss_pred HHhh------------cCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeec-------------------------
Confidence 9732 122456777776 8999999999999999886533100
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCC-hHHHHHHHHHHHHHcccC
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDRKRK 286 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~s-l~~~l~~~v~~~~~~~~~ 286 (389)
..+ .... ..+.|++|++. |+|.|+.+ +++++.++++||.++..+
T Consensus 268 --tK~---DGq~-----kKtasnsKL~s-l~pd~~ft~l~~ai~~t~~Wy~~Ny~q 312 (315)
T KOG1431|consen 268 --TKS---DGQF-----KKTASNSKLRS-LLPDFKFTPLEQAISETVQWYLDNYEQ 312 (315)
T ss_pred --cCC---CCCc-----ccccchHHHHH-hCCCcccChHHHHHHHHHHHHHHhHHh
Confidence 000 0111 12689999986 89999886 999999999999986554
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-21 Score=183.28 Aligned_cols=212 Identities=15% Similarity=0.072 Sum_probs=154.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCC--eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQ--RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvk--rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+++.+.++|+.++++++++|++.+++ ++|++||.. +||.....+.+|+.+..+ .+.|+..+...|+.+....
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~----~~~~~~~~~~~e~~~~~~~- 151 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAG----DDFLAELCRDWEEAAQAAE- 151 (292)
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCC----CChHHHHHHHHHHHhhhch-
Confidence 44567889999999999999999874 466666666 688766667788875444 4567778888888776542
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
+.+++++++||+.||||++. ..+.+......... ..+|++++.++|+|++|+|+++..+++
T Consensus 152 -------~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~---------- 212 (292)
T TIGR01777 152 -------DLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALE---------- 212 (292)
T ss_pred -------hcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhc----------
Confidence 25799999999999999753 44555444433221 125888999999999999999999986
Q ss_pred CCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHH
Q 016468 166 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 245 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (389)
.+.. +++||+++++++|++|+++.+.+.+|.+.+ ..+|.+.+.... + . ....
T Consensus 213 -~~~~-~g~~~~~~~~~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~~---~---------------~-------~~~~ 264 (292)
T TIGR01777 213 -NASI-SGPVNATAPEPVRNKEFAKALARALHRPAF-FPVPAFVLRALL---G---------------E-------MADL 264 (292)
T ss_pred -Cccc-CCceEecCCCccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHHh---c---------------h-------hhHH
Confidence 3333 358999999999999999999999997643 457776543211 0 0 1112
Q ss_pred hccccccchHHHHHhCCCCCCC-ChHHHH
Q 016468 246 VGVTHYFSLLKAKDELCYVPIV-SPREGM 273 (389)
Q Consensus 246 ~~~~~~~d~~ka~~~LG~~p~~-sl~~~l 273 (389)
+..+...+++|+++ +||+|++ +++|++
T Consensus 265 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 265 LLKGQRVLPEKLLE-AGFQFQYPDLDEAL 292 (292)
T ss_pred HhCCcccccHHHHh-cCCeeeCcChhhcC
Confidence 33455788999975 9999998 577653
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-21 Score=193.15 Aligned_cols=204 Identities=15% Similarity=0.067 Sum_probs=144.1
Q ss_pred hhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCc-eecCCc--cc--CCCCCCCCCCC--CCCCCCcHHHHHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYN-VVFGGK--EI--VNGNESLPYFP--IDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~-vvyg~~--~~--~~~~E~~p~~p--~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+...++|+.++.|++++|++. +++|+||+||.. .+||.. .. ...+|+.+... ...+.+.|+.||..+|++++
T Consensus 149 ~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~ 228 (367)
T PLN02686 149 KSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAW 228 (367)
T ss_pred chhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHH
Confidence 456789999999999999987 899999999974 367642 11 23556542211 12235789999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.. +.|++++++||++||||+.....+..+..+..|. ..++|++. .+|+||+|+|++++++++...
T Consensus 229 ~~~~-------~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~-~~~~g~g~--~~~v~V~Dva~A~~~al~~~~--- 295 (367)
T PLN02686 229 RAAR-------GKGLKLATICPALVTGPGFFRRNSTATIAYLKGA-QEMLADGL--LATADVERLAEAHVCVYEAMG--- 295 (367)
T ss_pred HHHH-------hcCceEEEEcCCceECCCCCCCCChhHHHHhcCC-CccCCCCC--cCeEEHHHHHHHHHHHHhccC---
Confidence 8752 3689999999999999986432222222344554 44556654 579999999999999997310
Q ss_pred CCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHH
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 241 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (389)
+...+++| |+++++++++|+++.+.+.+|.+.+....|. . ++.
T Consensus 296 ------~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~---------------------------~---~~~ 338 (367)
T PLN02686 296 ------NKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNS---------------------------S---SDD 338 (367)
T ss_pred ------CCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCch---------------------------h---hcC
Confidence 12345678 8889999999999999999997644332211 0 001
Q ss_pred HHHHhccccccchHHHHHhCCCCCCC
Q 016468 242 EVYKVGVTHYFSLLKAKDELCYVPIV 267 (389)
Q Consensus 242 ~~~~~~~~~~~d~~ka~~~LG~~p~~ 267 (389)
+. .....|++|++++|||+|+-
T Consensus 339 d~----~~~~~d~~kl~~~l~~~~~~ 360 (367)
T PLN02686 339 TP----ARFELSNKKLSRLMSRTRRC 360 (367)
T ss_pred Cc----ccccccHHHHHHHHHHhhhc
Confidence 11 12367999999999999974
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-21 Score=180.38 Aligned_cols=149 Identities=31% Similarity=0.472 Sum_probs=132.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+...+.+.|+.++.|++++|.+.+++|+||+||.. +|+.....+.+|+.+..| .+.|+.+|..+|++++.+..
T Consensus 83 ~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~-~y~~~~~~~~~e~~~~~~----~~~Y~~~K~~~e~~~~~~~~- 156 (236)
T PF01370_consen 83 EDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSAS-VYGDPDGEPIDEDSPINP----LSPYGASKRAAEELLRDYAK- 156 (236)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGG-GGTSSSSSSBETTSGCCH----SSHHHHHHHHHHHHHHHHHH-
T ss_pred cccccccccccccccccccccccccccccccccccc-cccccccccccccccccc----cccccccccccccccccccc-
Confidence 466788899999999999999999999999999988 799887777899888766 78899999999999999863
Q ss_pred CCCCCCCCCceEEEEecCceecCC----C-CCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPG----E-ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~----~-~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.+++++++||+.||||+ . .+.++.++..+.+|++..+++++++.++++|++|+|++++.+++
T Consensus 157 ------~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~------ 224 (236)
T PF01370_consen 157 ------KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALE------ 224 (236)
T ss_dssp ------HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHH------
T ss_pred ------ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHh------
Confidence 358999999999999999 2 25578999999999988899999999999999999999999998
Q ss_pred CCCCCCCCCCCceEEEe
Q 016468 162 PGQKGRPIASGQPYFVS 178 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~ 178 (389)
++...+++|||+
T Consensus 225 -----~~~~~~~~yNig 236 (236)
T PF01370_consen 225 -----NPKAAGGIYNIG 236 (236)
T ss_dssp -----HSCTTTEEEEES
T ss_pred -----CCCCCCCEEEeC
Confidence 444678999985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=181.73 Aligned_cols=222 Identities=14% Similarity=0.077 Sum_probs=161.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
++..+.++|+.++.|++++|+++|++|+||+||.++ ++. + ..+|..+|..+|+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~----------~~~-~-------~~~~~~~K~~~e~~l~~~---- 135 (317)
T CHL00194 78 DLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNA----------EQY-P-------YIPLMKLKSDIEQKLKKS---- 135 (317)
T ss_pred CccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccc----------ccc-C-------CChHHHHHHHHHHHHHHc----
Confidence 455688999999999999999999999999999653 111 1 256899999999998653
Q ss_pred CCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 167 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 167 (389)
+++++++||+.+|+.- +......+..+.+.. .+++++.++|+|++|+|+++..+++ .
T Consensus 136 -------~l~~tilRp~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~Dva~~~~~~l~-----------~ 192 (317)
T CHL00194 136 -------GIPYTIFRLAGFFQGL----ISQYAIPILEKQPIW-ITNESTPISYIDTQDAAKFCLKSLS-----------L 192 (317)
T ss_pred -------CCCeEEEeecHHhhhh----hhhhhhhhccCCceE-ecCCCCccCccCHHHHHHHHHHHhc-----------C
Confidence 5999999999998631 111111122334333 3556778899999999999999986 4
Q ss_pred CCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhc
Q 016468 168 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 247 (389)
Q Consensus 168 ~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (389)
+...|++||+++++++|+.|+++.+.+.+|.+.....+|.+....++.+.+.+.... .....+....+....
T Consensus 193 ~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~ 264 (317)
T CHL00194 193 PETKNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTW--------NISDRLAFVEILNTS 264 (317)
T ss_pred ccccCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccch--------hhHHHHHHHHHHhcC
Confidence 455689999999999999999999999999988888899998888776655331000 001111122223333
Q ss_pred cccccchHHHHHhCCCCCC--CChHHHHHHHHHHHHH
Q 016468 248 VTHYFSLLKAKDELCYVPI--VSPREGMAATISYWQD 282 (389)
Q Consensus 248 ~~~~~d~~ka~~~LG~~p~--~sl~~~l~~~v~~~~~ 282 (389)
.+..++.+++++.||+.|. .++++++++.+.-...
T Consensus 265 ~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~ 301 (317)
T CHL00194 265 NNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILK 301 (317)
T ss_pred CCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHH
Confidence 3445688899999999984 4788888887765443
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=173.72 Aligned_cols=218 Identities=20% Similarity=0.160 Sum_probs=154.7
Q ss_pred chhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCc----ccCCCCCCCCCCCC--CCCCCcHHHHHHHHHHHHH
Q 016468 9 FGRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGK----EIVNGNESLPYFPI--DEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~----~~~~~~E~~p~~p~--~~~~~~Y~~SK~~aE~~l~ 81 (389)
..+..+.++.||.||+++|++.. |||+||+||..++.... +...+||+.--.+. ......|..||..||+..+
T Consensus 97 e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw 176 (327)
T KOG1502|consen 97 EKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAW 176 (327)
T ss_pred HHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHH
Confidence 34789999999999999999997 99999999999886542 22234555422110 0112689999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC---CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER---HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~---~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
++.. +.+++.+.+-|+.|+||.... ....++....+|.... ..+....||||+|+|.||+.|.+
T Consensus 177 ~fa~-------e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~---~~n~~~~~VdVrDVA~AHv~a~E--- 243 (327)
T KOG1502|consen 177 EFAK-------ENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAET---YPNFWLAFVDVRDVALAHVLALE--- 243 (327)
T ss_pred HHHH-------hCCccEEEecCCceECCCcccccchhHHHHHHHHhccccc---CCCCceeeEeHHHHHHHHHHHHc---
Confidence 9984 468999999999999998764 3345555566664222 22344459999999999999998
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 238 (389)
.+.+.| .|.+. ++.+++.|+++.+.+.+..- .+|.. .
T Consensus 244 --------~~~a~G-Ryic~-~~~~~~~ei~~~l~~~~P~~----~ip~~--------------------------~--- 280 (327)
T KOG1502|consen 244 --------KPSAKG-RYICV-GEVVSIKEIADILRELFPDY----PIPKK--------------------------N--- 280 (327)
T ss_pred --------CcccCc-eEEEe-cCcccHHHHHHHHHHhCCCC----CCCCC--------------------------C---
Confidence 566666 45444 45566999999999887432 13321 0
Q ss_pred CHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 239 LPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 239 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.++.......+.+|++|+++..|++.+ +++|.+.++++++++.+
T Consensus 281 -~~~~~~~~~~~~~~~~k~k~lg~~~~~-~l~e~~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 281 -AEEHEGFLTSFKVSSEKLKSLGGFKFR-PLEETLSDTVESLREKG 324 (327)
T ss_pred -CccccccccccccccHHHHhcccceec-ChHHHHHHHHHHHHHhc
Confidence 000000011125899999986558776 99999999999998754
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.4e-20 Score=178.02 Aligned_cols=194 Identities=19% Similarity=0.233 Sum_probs=146.7
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++..+++|+.|+.|++++|.+.+++++|++||... ..| .++|+.||..+|+++..++.
T Consensus 91 ~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~---------------~~p----~~~Y~~sK~~~E~l~~~~~~ 151 (324)
T TIGR03589 91 EYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA---------------ANP----INLYGATKLASDKLFVAANN 151 (324)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC---------------CCC----CCHHHHHHHHHHHHHHHHHh
Confidence 34567889999999999999999999999999999642 122 47899999999999977531
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
- ....|++++++||++||||++ +.++.+.+.+..+.....++++++.++|+|++|+|++++.+++
T Consensus 152 ~----~~~~gi~~~~lR~g~v~G~~~-~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~---------- 216 (324)
T TIGR03589 152 I----SGSKGTRFSVVRYGNVVGSRG-SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLE---------- 216 (324)
T ss_pred h----ccccCcEEEEEeecceeCCCC-CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHh----------
Confidence 0 023689999999999999975 4677777777777533334578888999999999999999987
Q ss_pred CCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHH
Q 016468 166 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 245 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (389)
.. ..+++| ++.++.+++.|+++.+.+..+... .+ ..+. .+ ...
T Consensus 217 -~~-~~~~~~-~~~~~~~sv~el~~~i~~~~~~~~----~~---------------------------~~~g-~~--~~~ 259 (324)
T TIGR03589 217 -RM-LGGEIF-VPKIPSMKITDLAEAMAPECPHKI----VG---------------------------IRPG-EK--LHE 259 (324)
T ss_pred -hC-CCCCEE-ccCCCcEEHHHHHHHHHhhCCeeE----eC---------------------------CCCC-ch--hHh
Confidence 21 235677 677778999999999988653221 11 0110 00 011
Q ss_pred hccccccchHHHHHhCCCCCCCChHHHHH
Q 016468 246 VGVTHYFSLLKAKDELCYVPIVSPREGMA 274 (389)
Q Consensus 246 ~~~~~~~d~~ka~~~LG~~p~~sl~~~l~ 274 (389)
...|++|++++|||+|++++++++.
T Consensus 260 ----~~~~~~~~~~~lg~~~~~~l~~~~~ 284 (324)
T TIGR03589 260 ----VMITEDDARHTYELGDYYAILPSIS 284 (324)
T ss_pred ----hhcChhhhhhhcCCCCeEEEccccc
Confidence 2479999999999999999998885
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.8e-20 Score=186.29 Aligned_cols=174 Identities=20% Similarity=0.196 Sum_probs=134.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcccCCCCCCCCCC-------------------------
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGNESLPYF------------------------- 60 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~------------------------- 60 (389)
.+++...++|+.||.|++++|++. +++++||+||.. |||..... .+|. ++.
T Consensus 127 ~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~-vyG~~~~~-i~E~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (491)
T PLN02996 127 ERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY-VCGEKSGL-ILEK-PFHMGETLNGNRKLDINEEKKLVKEKLK 203 (491)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE-EecCCCce-eeee-cCCCcccccccccCChHHHHHHHHHHHH
Confidence 457788999999999999999986 799999999998 68864321 1111 000
Q ss_pred ----------------------C--CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC--
Q 016468 61 ----------------------P--IDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-- 114 (389)
Q Consensus 61 ----------------------p--~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-- 114 (389)
| ...+.+.|+.||+.||+++.++. .+++++++||++||||++...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~---------~~lpv~i~RP~~V~G~~~~p~~g 274 (491)
T PLN02996 204 ELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFK---------ENLPLVIIRPTMITSTYKEPFPG 274 (491)
T ss_pred HHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhc---------CCCCEEEECCCEeccCCcCCCCC
Confidence 0 11235789999999999998875 479999999999999976531
Q ss_pred -------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCC--CCCCh
Q 016468 115 -------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG--FPINT 185 (389)
Q Consensus 115 -------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~--~~~s~ 185 (389)
...++..+..|.....+|+|++.+|+|||||+|+++++++..-. .....+++||++++ .++|+
T Consensus 275 wi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~--------~~~~~~~vYNi~s~~~~~~s~ 346 (491)
T PLN02996 275 WIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHA--------GGQGSEIIYHVGSSLKNPVKF 346 (491)
T ss_pred cccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhh--------ccCCCCcEEEecCCCCCcccH
Confidence 23455556778877788999999999999999999999987310 01124679999988 89999
Q ss_pred HHHHHHHHHhCCCCC
Q 016468 186 FEFIGPLLKTLDYDL 200 (389)
Q Consensus 186 ~e~~~~l~~~lg~~~ 200 (389)
.|+++.+.+.++..+
T Consensus 347 ~ei~~~~~~~~~~~p 361 (491)
T PLN02996 347 SNLHDFAYRYFSKNP 361 (491)
T ss_pred HHHHHHHHHHhhhCC
Confidence 999999999887543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-19 Score=189.37 Aligned_cols=185 Identities=19% Similarity=0.191 Sum_probs=134.9
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
..++|+.+|.|++++|++.+++|+|++||.. |..+|+++.++
T Consensus 75 ~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------------K~aaE~ll~~~-------- 116 (854)
T PRK05865 75 NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------------QPRVEQMLADC-------- 116 (854)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------------HHHHHHHHHHc--------
Confidence 5689999999999999999999999999842 88999988643
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
+++++++||++||||+.. .++..+.. ......|++.+.++|+|++|+|+++..+++ .+...
T Consensus 117 ---gl~~vILRp~~VYGP~~~----~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~-----------~~~~~ 177 (854)
T PRK05865 117 ---GLEWVAVRCALIFGRNVD----NWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALL-----------DTVID 177 (854)
T ss_pred ---CCCEEEEEeceEeCCChH----HHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHh-----------CCCcC
Confidence 599999999999999743 23333322 222223555667899999999999999986 22334
Q ss_pred CceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccc
Q 016468 172 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 251 (389)
Q Consensus 172 g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (389)
+++||+++++++|++|+++.+.+... .++.+..... .. ..+.........
T Consensus 178 ggvyNIgsg~~~Si~EIae~l~~~~~------~v~~~~~~~~--------------------~~----~~~~~~~~~~~~ 227 (854)
T PRK05865 178 SGPVNLAAPGELTFRRIAAALGRPMV------PIGSPVLRRV--------------------TS----FAELELLHSAPL 227 (854)
T ss_pred CCeEEEECCCcccHHHHHHHHhhhhc------cCCchhhhhc--------------------cc----hhhhhcccCCcc
Confidence 67999999999999999998876431 1111100000 00 001111111235
Q ss_pred cchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 252 FSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 252 ~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+|++|++++|||+|+++++++|+++++||+.+
T Consensus 228 ~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r 259 (854)
T PRK05865 228 MDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR 259 (854)
T ss_pred CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 89999999999999999999999999999863
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-18 Score=165.55 Aligned_cols=183 Identities=24% Similarity=0.236 Sum_probs=133.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCC-CCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFP-IDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p-~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
+.+.+.++|+.|+.+++++|.+.+++++||+||.+ +|+.....+..|+++..+ .....+.|+.||+.+|+++.++..
T Consensus 104 ~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~-v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~- 181 (367)
T TIGR01746 104 PYSELRAANVLGTREVLRLAASGRAKPLHYVSTIS-VLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD- 181 (367)
T ss_pred cHHHHhhhhhHHHHHHHHHHhhCCCceEEEEcccc-ccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh-
Confidence 45567789999999999999999999999999999 576543333344443221 122357899999999999998752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.|++++++||+.|||+...+ .+..++..+...... +.......+|+|+||++++++.++.
T Consensus 182 -------~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~vddva~ai~~~~~----- 247 (367)
T TIGR01746 182 -------RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAY--PDSPELTEDLTPVDYVARAIVALSS----- 247 (367)
T ss_pred -------cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCC--CCCCccccCcccHHHHHHHHHHHHh-----
Confidence 48999999999999984432 233444443332211 2222246789999999999999886
Q ss_pred CCCCCCCCCC--CCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHH
Q 016468 161 IPGQKGRPIA--SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFL 213 (389)
Q Consensus 161 ~~~~~~~~~~--~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~ 213 (389)
.+.. .+++||+++++++++.|+++.+.+ +|++.+.++.+.|+..+.
T Consensus 248 ------~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~ 295 (367)
T TIGR01746 248 ------QPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLE 295 (367)
T ss_pred ------CCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHH
Confidence 2222 278999999999999999999999 888877666666655443
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-18 Score=164.14 Aligned_cols=162 Identities=15% Similarity=0.101 Sum_probs=116.1
Q ss_pred chhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCcee-cCCc---ccCCCCCCCCCCCC--CCCCCcHHHHHHHHHHHHH
Q 016468 9 FGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVV-FGGK---EIVNGNESLPYFPI--DEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vv-yg~~---~~~~~~E~~p~~p~--~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.++++|+.||.|++++|.+. +++|+|++||..++ |+.. ...+.+|+.+..+. ......|+.||..+|+.++
T Consensus 96 ~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~ 175 (297)
T PLN02583 96 DEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAW 175 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHH
Confidence 4678999999999999999987 69999999998854 3311 12346676543220 0112379999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
++.+ +.+++++++||+.||||+.....+ ...+.. ...+ ....+||||+|+|+++++|++
T Consensus 176 ~~~~-------~~gi~~v~lrp~~v~Gp~~~~~~~-----~~~~~~-~~~~--~~~~~~v~V~Dva~a~~~al~------ 234 (297)
T PLN02583 176 ALAM-------DRGVNMVSINAGLLMGPSLTQHNP-----YLKGAA-QMYE--NGVLVTVDVNFLVDAHIRAFE------ 234 (297)
T ss_pred HHHH-------HhCCcEEEEcCCcccCCCCCCchh-----hhcCCc-ccCc--ccCcceEEHHHHHHHHHHHhc------
Confidence 8752 358999999999999998753222 122221 1222 234679999999999999997
Q ss_pred CCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 197 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg 197 (389)
.+...| .|+++++......++.+.+.+.++
T Consensus 235 -----~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 235 -----DVSSYG-RYLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred -----CcccCC-cEEEecCCCccHHHHHHHHHHhCC
Confidence 444445 677777665556789999988875
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-17 Score=153.67 Aligned_cols=209 Identities=14% Similarity=0.059 Sum_probs=144.9
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcc------cCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE------IVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~------~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
..++...+++|+.||.||+++|++.|++ ++++||.+ +|+... ..+.+|+++..+ +.+.|+.||..+|++
T Consensus 77 ~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~-vy~~~~~~p~~~~~~~~Ee~~p~~---~~s~Yg~sK~~~E~~ 151 (298)
T PLN02778 77 ESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGC-IFEYDDAHPLGSGIGFKEEDTPNF---TGSFYSKTKAMVEEL 151 (298)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecce-EeCCCCCCCcccCCCCCcCCCCCC---CCCchHHHHHHHHHH
Confidence 3567889999999999999999999996 56667766 676432 123566554332 258999999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+..+. +..++|+..++|++.. ....++..+..+......+ .+++|++|++++++.+++
T Consensus 152 ~~~y~------------~~~~lr~~~~~~~~~~-~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~---- 209 (298)
T PLN02778 152 LKNYE------------NVCTLRVRMPISSDLS-NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAK---- 209 (298)
T ss_pred HHHhh------------ccEEeeecccCCcccc-cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHh----
Confidence 98874 2468888888887533 2345777787776544433 379999999999999985
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
.. . +++||+++++++|++|+++.+.+.+|.+.....+... .
T Consensus 210 -------~~-~-~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~------------------------------~ 250 (298)
T PLN02778 210 -------RN-L-TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLE------------------------------E 250 (298)
T ss_pred -------CC-C-CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHH------------------------------H
Confidence 22 2 3599999999999999999999999964321111110 0
Q ss_pred HHHHHHh-ccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 240 PAEVYKV-GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 240 ~~~~~~~-~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
.+..... ......|++|+++.++-.+. ..+++++..++-.+
T Consensus 251 ~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~~~ 292 (298)
T PLN02778 251 QAKVIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFEPNK 292 (298)
T ss_pred HHHHHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHHHHH
Confidence 0010101 11125899999998776554 55777776666553
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=150.78 Aligned_cols=242 Identities=22% Similarity=0.231 Sum_probs=183.7
Q ss_pred ccccCcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 3 GKEMLQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 3 g~~~~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
+-+..+|+.+.++|-.||.+++||.+..|- -||.+.||.. +||.....+-+|++|..| .++|+.+|.-|-=+.
T Consensus 92 ~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE-~fG~v~~~pq~E~TPFyP----rSPYAvAKlYa~W~t 166 (345)
T COG1089 92 GVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSE-LYGLVQEIPQKETTPFYP----RSPYAVAKLYAYWIT 166 (345)
T ss_pred cccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHH-hhcCcccCccccCCCCCC----CCHHHHHHHHHHhee
Confidence 345678999999999999999999999864 4899999988 899999999999999999 899999999999888
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHHcCCCc-ceecCCCccccceeHHHHHHHHHHHH
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLVP-FKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~~g~~~-~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
..+. ..+|+.+|.=...+--+|... +.+.+-+..++.|..- ...|+-+.++||-|..|-|+++.+.+
T Consensus 167 vNYR-------esYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmL 239 (345)
T COG1089 167 VNYR-------ESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLML 239 (345)
T ss_pred eehH-------hhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHH
Confidence 8776 348999998777776676443 2345666677778654 34499999999999999999999998
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHh-hhccccccC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL-YPWLNRWWL 233 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~-~~~~~~~~~ 233 (389)
++ + .+.-|.|+.|+..|++||++...+..|.+.....-- ..|...... +..+- -+
T Consensus 240 Qq-----------~--~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g---------~~e~g~da~~G~~~V--~i 295 (345)
T COG1089 240 QQ-----------E--EPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTG---------VDEKGVDAKTGKIIV--EI 295 (345)
T ss_pred cc-----------C--CCCceEEecCceeeHHHHHHHHHHHcCceEEEeecc---------ccccccccccCceeE--EE
Confidence 73 2 245799999999999999999999999654321000 000000000 00000 00
Q ss_pred CCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 234 PQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.+..+.|.|+..+ .-|.+||+++|||+|.+++++-+++|+++..+..
T Consensus 296 dp~~fRPaEV~~L----lgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~~ 342 (345)
T COG1089 296 DPRYFRPAEVDLL----LGDPTKAKEKLGWRPEVSLEELVREMVEADLEAA 342 (345)
T ss_pred CccccCchhhhhh----cCCHHHHHHHcCCccccCHHHHHHHHHHHHHHHh
Confidence 2234556777766 6799999999999999999999999999877643
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.2e-17 Score=160.40 Aligned_cols=171 Identities=16% Similarity=0.131 Sum_probs=141.7
Q ss_pred hhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC
Q 016468 10 GRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFK 89 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~ 89 (389)
...+++|+.++.|++++|++.|++|||++||.+ +++ | ...|.++|..+|+.+....
T Consensus 152 ~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~-v~~--------------p----~~~~~~sK~~~E~~l~~~~----- 207 (390)
T PLN02657 152 KDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC-VQK--------------P----LLEFQRAKLKFEAELQALD----- 207 (390)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc-ccC--------------c----chHHHHHHHHHHHHHHhcc-----
Confidence 456789999999999999999999999999987 332 1 3578999999999987621
Q ss_pred CCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccc-cceeHHHHHHHHHHHHhcccCCCCCCCCCC
Q 016468 90 KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKT-DWIYVDNLVLALILASMGLLDDIPGQKGRP 168 (389)
Q Consensus 90 ~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~-~~v~vdDla~a~~~a~~~l~~~~~~~~~~~ 168 (389)
.+++++|+||+.+||+ +...+..+..|.+..++|+++..+ ++||++|+|+++..+++ .+
T Consensus 208 ----~gl~~tIlRp~~~~~~-----~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~-----------~~ 267 (390)
T PLN02657 208 ----SDFTYSIVRPTAFFKS-----LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVL-----------DE 267 (390)
T ss_pred ----CCCCEEEEccHHHhcc-----cHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHh-----------Cc
Confidence 5799999999999974 334566777888777789988754 68999999999999986 34
Q ss_pred CCCCceEEEeCC-CCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHh
Q 016468 169 IASGQPYFVSDG-FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL 224 (389)
Q Consensus 169 ~~~g~~y~i~~~-~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~ 224 (389)
...+++|||+++ +.+|++|+++.+.+.+|.+.+...+|.+.+..++.+.+.+..++
T Consensus 268 ~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~~~~~~~~~~~~~~ 324 (390)
T PLN02657 268 SKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMDFAIGVLDFLAKIF 324 (390)
T ss_pred cccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHHHHHHHHHHhhhhC
Confidence 456789999985 69999999999999999988888999999888888877666554
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=151.24 Aligned_cols=223 Identities=18% Similarity=0.165 Sum_probs=166.0
Q ss_pred hhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC
Q 016468 10 GRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFK 89 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~ 89 (389)
-.++++|+.+++.|.+.|++.||.|||++|+.++ +-.. .+-|-+||..+|..++++.
T Consensus 147 f~f~Dvn~~~aerlAricke~GVerfIhvS~Lga----------nv~s--------~Sr~LrsK~~gE~aVrdaf----- 203 (391)
T KOG2865|consen 147 FSFEDVNVHIAERLARICKEAGVERFIHVSCLGA----------NVKS--------PSRMLRSKAAGEEAVRDAF----- 203 (391)
T ss_pred cccccccchHHHHHHHHHHhhChhheeehhhccc----------cccC--------hHHHHHhhhhhHHHHHhhC-----
Confidence 4578999999999999999999999999999885 1111 3789999999999999986
Q ss_pred CCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCC-ccccceeHHHHHHHHHHHHhcccCCCCCCCCCC
Q 016468 90 KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPS-VKTDWIYVDNLVLALILASMGLLDDIPGQKGRP 168 (389)
Q Consensus 90 ~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~-~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~ 168 (389)
-..+|+||+.|||..+ +++.......++-..+++++.|+ ...++|||-|++++++.|.. .+
T Consensus 204 ------PeAtIirPa~iyG~eD-rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvk-----------Dp 265 (391)
T KOG2865|consen 204 ------PEATIIRPADIYGTED-RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVK-----------DP 265 (391)
T ss_pred ------Ccceeechhhhcccch-hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhcc-----------Cc
Confidence 4689999999999866 45555555666566677777664 55699999999999999997 67
Q ss_pred CCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhcc
Q 016468 169 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV 248 (389)
Q Consensus 169 ~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (389)
+..|++|..+++....+.|+++.+-+....-......|.+.+.+.+...+++...+. +..+++++.+..+..
T Consensus 266 ~s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~--------~~~pln~d~ie~~~v 337 (391)
T KOG2865|consen 266 DSMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFP--------PPSPLNRDQIERLTV 337 (391)
T ss_pred cccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCC--------CCCCCCHHHhhheee
Confidence 889999999999999999999999888765444555555555555544444322221 223477777766644
Q ss_pred c-cccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 249 T-HYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 249 ~-~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
+ -..+....-++||-.++ +++-.--+.+..|+.
T Consensus 338 ~~~vlt~~~tleDLgv~~t-~le~~~~e~l~~yR~ 371 (391)
T KOG2865|consen 338 TDLVLTGAPTLEDLGVVLT-KLELYPVEFLRQYRK 371 (391)
T ss_pred hhhhcCCCCcHhhcCceee-ecccccHHHHHHHhh
Confidence 4 35566666778999876 666544444444443
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=138.60 Aligned_cols=217 Identities=19% Similarity=0.144 Sum_probs=167.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH--cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE--FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~--~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..++.+.+.-+..|+.|.++-.+ .+.+.+|.-|.++ +||...+..++|++|.. .+.-+..-..-|+....+.
T Consensus 76 ~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvG-yYG~~~~~~~tE~~~~g-----~~Fla~lc~~WE~~a~~a~ 149 (297)
T COG1090 76 KQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVG-YYGHSGDRVVTEESPPG-----DDFLAQLCQDWEEEALQAQ 149 (297)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEE-EecCCCceeeecCCCCC-----CChHHHHHHHHHHHHhhhh
Confidence 46788999999999999999884 4677888888888 89999999999997653 3677777777888877774
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
+.|.++|++|.++|.|++. +.++.|....+.|.- -.+|+|+|.++|||+||+++++..+++
T Consensus 150 --------~~gtRvvllRtGvVLs~~G-GaL~~m~~~fk~glG-G~~GsGrQ~~SWIhieD~v~~I~fll~--------- 210 (297)
T COG1090 150 --------QLGTRVVLLRTGVVLSPDG-GALGKMLPLFKLGLG-GKLGSGRQWFSWIHIEDLVNAILFLLE--------- 210 (297)
T ss_pred --------hcCceEEEEEEEEEecCCC-cchhhhcchhhhccC-CccCCCCceeeeeeHHHHHHHHHHHHh---------
Confidence 3689999999999999865 456777766665542 246999999999999999999999998
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (389)
++..+| .||.+.+.|++..||...+.+.++.+. ..++|....+++-. |....++
T Consensus 211 --~~~lsG-p~N~taP~PV~~~~F~~al~r~l~RP~-~~~vP~~~~rl~LG--e~a~~lL-------------------- 264 (297)
T COG1090 211 --NEQLSG-PFNLTAPNPVRNKEFAHALGRALHRPA-ILPVPSFALRLLLG--EMADLLL-------------------- 264 (297)
T ss_pred --CcCCCC-cccccCCCcCcHHHHHHHHHHHhCCCc-cccCcHHHHHHHhh--hhHHHHh--------------------
Confidence 566666 799999999999999999999999764 46777766555322 2221111
Q ss_pred HhccccccchHHHHHhCCCCCCC-ChHHHHHHHHH
Q 016468 245 KVGVTHYFSLLKAKDELCYVPIV-SPREGMAATIS 278 (389)
Q Consensus 245 ~~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~ 278 (389)
.+...=+.|+.+ .||+.++ +++++|++.+.
T Consensus 265 ---~gQrvlP~kl~~-aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 265 ---GGQRVLPKKLEA-AGFQFQYPDLEEALADILK 295 (297)
T ss_pred ---ccchhhHHHHHH-CCCeeecCCHHHHHHHHHh
Confidence 112334566654 6988877 78999887654
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.5e-16 Score=159.56 Aligned_cols=173 Identities=17% Similarity=0.186 Sum_probs=131.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcccCCCCCCC-C--------------------------
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGNESL-P-------------------------- 58 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~~~~~~E~~-p-------------------------- 58 (389)
.+++...++|+.||.|++++|++. +++++||+||.. |||.... .+.|.. +
T Consensus 234 ~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay-VyG~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~ 311 (605)
T PLN02503 234 ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY-VNGQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEA 311 (605)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce-eecCCCC-eeeeeecCcccccccccccccccccccccCCHHH
Confidence 357788999999999999999987 578999999998 6886531 111110 0
Q ss_pred ------------CC----------------CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCce----
Q 016468 59 ------------YF----------------PIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAI---- 106 (389)
Q Consensus 59 ------------~~----------------p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~I---- 106 (389)
.. -...+.+.|..||++||++++++. .+++++|+||+.|
T Consensus 312 ~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~---------~~LPv~IvRPsiV~st~ 382 (605)
T PLN02503 312 EIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR---------GDIPVVIIRPSVIESTW 382 (605)
T ss_pred HHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc---------CCCCEEEEcCCEecccc
Confidence 00 012345999999999999999875 4799999999999
Q ss_pred ------ecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 107 ------YGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 107 ------yGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
|+++.....+.++.. .+|....++++++...|+|+||++|.+++.++..... .....+++||++++
T Consensus 383 ~eP~pGw~d~~~~~~p~~~~~-g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~-------~~~~~~~vYn~ts~ 454 (605)
T PLN02503 383 KDPFPGWMEGNRMMDPIVLYY-GKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGG-------AAKPEINVYQIASS 454 (605)
T ss_pred cCCccccccCccccchhhhhe-eccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhc-------ccCCCCCEEEeCCC
Confidence 666654444444333 4777677889999999999999999999999542111 11235789999988
Q ss_pred --CCCChHHHHHHHHHhCCC
Q 016468 181 --FPINTFEFIGPLLKTLDY 198 (389)
Q Consensus 181 --~~~s~~e~~~~l~~~lg~ 198 (389)
.|+++.|+.+.+.+.+..
T Consensus 455 ~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 455 VVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred CCCCeEHHHHHHHHHHHHhh
Confidence 999999999999887653
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-14 Score=152.21 Aligned_cols=206 Identities=15% Similarity=0.088 Sum_probs=138.2
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcc------cCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE------IVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~------~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
..+++..+++|+.||.||+++|++.|++ +|++||.. ||++.. ..+.+|+++..| +.+.|++||..+|++
T Consensus 448 ~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~-v~~~~~~~~~~~~~p~~E~~~~~~---~~~~Yg~sK~~~E~~ 522 (668)
T PLN02260 448 ESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGC-IFEYDAKHPEGSGIGFKEEDKPNF---TGSFYSKTKAMVEEL 522 (668)
T ss_pred HhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccc-eecCCcccccccCCCCCcCCCCCC---CCChhhHHHHHHHHH
Confidence 4577889999999999999999999995 77888877 676421 235677665443 248999999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+..+. +..++|+..+||.+..+ -..++..+..+...... + .+..+++|++.+++.+++
T Consensus 523 ~~~~~------------~~~~~r~~~~~~~~~~~-~~nfv~~~~~~~~~~~v--p---~~~~~~~~~~~~~~~l~~---- 580 (668)
T PLN02260 523 LREYD------------NVCTLRVRMPISSDLSN-PRNFITKISRYNKVVNI--P---NSMTVLDELLPISIEMAK---- 580 (668)
T ss_pred HHhhh------------hheEEEEEEecccCCCC-ccHHHHHHhccceeecc--C---CCceehhhHHHHHHHHHH----
Confidence 98873 35777888888754221 12334444333322111 1 346888999999888875
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
. ..+++||+++++.+|++|+++.+.+.++......+++.. .. +.
T Consensus 581 -------~--~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~--~~---------------------~~---- 624 (668)
T PLN02260 581 -------R--NLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLE--EQ---------------------AK---- 624 (668)
T ss_pred -------h--CCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHH--Hh---------------------hh----
Confidence 2 125699999999999999999999987522111222111 00 00
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHH
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATIS 278 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~ 278 (389)
....... .+.+|++|+++.+|. +. +++++|.+.+.
T Consensus 625 -~~~a~rp-~~~l~~~k~~~~~~~-~~-~~~~~l~~~~~ 659 (668)
T PLN02260 625 -VIVAPRS-NNEMDASKLKKEFPE-LL-SIKESLIKYVF 659 (668)
T ss_pred -HhhCCCc-cccccHHHHHHhCcc-cc-chHHHHHHHHh
Confidence 0000001 126899999998999 65 89999987764
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.6e-14 Score=143.64 Aligned_cols=158 Identities=19% Similarity=0.279 Sum_probs=135.7
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
++.||....++||.||.|+++||.+.||+++|.+||.-||+ | .+.||.||..||.++.+++
T Consensus 341 ~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~---------------P----tNvmGaTKr~aE~~~~a~~ 401 (588)
T COG1086 341 VEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVN---------------P----TNVMGATKRLAEKLFQAAN 401 (588)
T ss_pred hhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccC---------------C----chHhhHHHHHHHHHHHHHh
Confidence 56799999999999999999999999999999999998853 2 6999999999999999997
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
++. ++.+...|++|.|+|.|..+ +.+|-+.+++++|.++. ..+++..+-|..++|.|+.++.|..
T Consensus 402 ~~~----~~~~T~f~~VRFGNVlGSrG-SViPlFk~QI~~GgplT-vTdp~mtRyfMTI~EAv~LVlqA~a--------- 466 (588)
T COG1086 402 RNV----SGTGTRFCVVRFGNVLGSRG-SVIPLFKKQIAEGGPLT-VTDPDMTRFFMTIPEAVQLVLQAGA--------- 466 (588)
T ss_pred hcc----CCCCcEEEEEEecceecCCC-CCHHHHHHHHHcCCCcc-ccCCCceeEEEEHHHHHHHHHHHHh---------
Confidence 521 11268999999999999765 47899999999998664 5789999999999999999999985
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCC
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYD 199 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~ 199 (389)
....|++|-.--|+|++..|+++.+.+..|..
T Consensus 467 ---~~~gGeifvldMGepvkI~dLAk~mi~l~g~~ 498 (588)
T COG1086 467 ---IAKGGEIFVLDMGEPVKIIDLAKAMIELAGQT 498 (588)
T ss_pred ---hcCCCcEEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence 23357776555689999999999999999844
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.1e-14 Score=161.30 Aligned_cols=181 Identities=20% Similarity=0.228 Sum_probs=127.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc------------CCCCCCCCCCC-CCCCCCcHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI------------VNGNESLPYFP-IDEHVDSYGRSKS 74 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~------------~~~~E~~p~~p-~~~~~~~Y~~SK~ 74 (389)
+.+.+...|+.||.|++++|.+.++++++|+||.+ +|+.... ....|+.+..+ .....+.|+.||+
T Consensus 1077 ~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~-v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~ 1155 (1389)
T TIGR03443 1077 PYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTS-ALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKW 1155 (1389)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCee-ecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHH
Confidence 34455678999999999999999999999999998 5754211 11233332211 1223578999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC------HHHHHHHHHcCCCcceecCCCccccceeHHHHHH
Q 016468 75 VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVL 148 (389)
Q Consensus 75 ~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~ 148 (389)
.+|+++..+.. .|++++++||+.|||++..+. +..++....... ...+..+.++|+||||+++
T Consensus 1156 ~aE~l~~~~~~--------~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~Vddva~ 1224 (1389)
T TIGR03443 1156 VAEYIIREAGK--------RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG---LIPNINNTVNMVPVDHVAR 1224 (1389)
T ss_pred HHHHHHHHHHh--------CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC---CcCCCCCccccccHHHHHH
Confidence 99999998752 489999999999999976532 333443332222 2234456789999999999
Q ss_pred HHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHH
Q 016468 149 ALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 210 (389)
Q Consensus 149 a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~ 210 (389)
+++.++..- .....+.+||++++.++++.|+++.+.+ .|++.+....+.|..
T Consensus 1225 ai~~~~~~~---------~~~~~~~i~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~w~~ 1276 (1389)
T TIGR03443 1225 VVVAAALNP---------PKESELAVAHVTGHPRIRFNDFLGTLKT-YGYDVEIVDYVHWRK 1276 (1389)
T ss_pred HHHHHHhCC---------cccCCCCEEEeCCCCCCcHHHHHHHHHH-hCCCCCccCHHHHHH
Confidence 999998620 1112356899999999999999999976 477666555554544
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.5e-15 Score=137.76 Aligned_cols=158 Identities=21% Similarity=0.297 Sum_probs=125.2
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
++.++....++|+.||+|++++|.+++|+|+|++||.-|+ .| .+.||.||..+|+++..++
T Consensus 93 ~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv---------------~P----tnvmGatKrlaE~l~~~~~ 153 (293)
T PF02719_consen 93 MEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAV---------------NP----TNVMGATKRLAEKLVQAAN 153 (293)
T ss_dssp HCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCS---------------S------SHHHHHHHHHHHHHHHHC
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccC---------------CC----CcHHHHHHHHHHHHHHHHh
Confidence 4578899999999999999999999999999999998873 13 7999999999999999998
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
... ...+..++++|.|+|.|..+ +.+|.+.+++++|.++. ..+++..+-|+.+++.++.++.|...
T Consensus 154 ~~~----~~~~t~f~~VRFGNVlgS~G-SVip~F~~Qi~~g~PlT-vT~p~mtRffmti~EAv~Lvl~a~~~-------- 219 (293)
T PF02719_consen 154 QYS----GNSDTKFSSVRFGNVLGSRG-SVIPLFKKQIKNGGPLT-VTDPDMTRFFMTIEEAVQLVLQAAAL-------- 219 (293)
T ss_dssp CTS----SSS--EEEEEEE-EETTGTT-SCHHHHHHHHHTTSSEE-ECETT-EEEEE-HHHHHHHHHHHHHH--------
T ss_pred hhC----CCCCcEEEEEEecceecCCC-cHHHHHHHHHHcCCcce-eCCCCcEEEEecHHHHHHHHHHHHhh--------
Confidence 531 12468999999999999755 57899999999998664 46889999999999999999999862
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCC
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYD 199 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~ 199 (389)
...|++|..--|+|+++.|+++.+.+..|..
T Consensus 220 ----~~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 220 ----AKGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp ------TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred ----CCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 2347777666689999999999999999864
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.1e-14 Score=133.07 Aligned_cols=144 Identities=13% Similarity=0.040 Sum_probs=105.2
Q ss_pred hhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 016468 17 INGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCL 96 (389)
Q Consensus 17 v~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl 96 (389)
...+.|++++|+++||+|||++||..+ +.+ . .++...|+.+.+. .|+
T Consensus 82 ~~~~~~~i~aa~~~gv~~~V~~Ss~~~-~~~---------~-------------~~~~~~~~~l~~~----------~gi 128 (285)
T TIGR03649 82 APPMIKFIDFARSKGVRRFVLLSASII-EKG---------G-------------PAMGQVHAHLDSL----------GGV 128 (285)
T ss_pred hHHHHHHHHHHHHcCCCEEEEeecccc-CCC---------C-------------chHHHHHHHHHhc----------cCC
Confidence 346789999999999999999999763 110 0 0123456665543 369
Q ss_pred eEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEE
Q 016468 97 YTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYF 176 (389)
Q Consensus 97 ~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~ 176 (389)
+++++||+.+|+..... .....+..+.. ...+.++.+++|||++|+++++..+++ .+...++.|+
T Consensus 129 ~~tilRp~~f~~~~~~~---~~~~~~~~~~~-~~~~~g~~~~~~v~~~Dva~~~~~~l~-----------~~~~~~~~~~ 193 (285)
T TIGR03649 129 EYTVLRPTWFMENFSEE---FHVEAIRKENK-IYSATGDGKIPFVSADDIARVAYRALT-----------DKVAPNTDYV 193 (285)
T ss_pred CEEEEeccHHhhhhccc---ccccccccCCe-EEecCCCCccCcccHHHHHHHHHHHhc-----------CCCcCCCeEE
Confidence 99999999998643111 11222322222 234567888999999999999999986 4445578999
Q ss_pred EeCCCCCChHHHHHHHHHhCCCCCCccccCHH
Q 016468 177 VSDGFPINTFEFIGPLLKTLDYDLPKSWLAVP 208 (389)
Q Consensus 177 i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~ 208 (389)
+++++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus 194 l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~ 225 (285)
T TIGR03649 194 VLGPELLTYDDVAEILSRVLGRKITHVKLTEE 225 (285)
T ss_pred eeCCccCCHHHHHHHHHHHhCCceEEEeCCHH
Confidence 99999999999999999999998777777765
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.9e-15 Score=136.30 Aligned_cols=135 Identities=27% Similarity=0.360 Sum_probs=81.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCC------CCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNE------SLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E------~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+++...++||.||+++++.|.+.+.++|+|+|| .++.+.... ...| ..+..+.....+.|.+||+.||+++
T Consensus 102 ~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l 179 (249)
T PF07993_consen 102 APYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRPG-TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLL 179 (249)
T ss_dssp -S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-TT-T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHH
T ss_pred ccchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCCC-cccccccccccccchhhccCCccHHHHHHHHHHHH
Confidence 3567789999999999999999888779999999 434443332 2211 1111222344689999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCC-----C-HH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----H-LP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----~-~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
.++.. ..|++++|+||+.|+|...++ . .. .+...+..|......++++...|+++||.+|+++
T Consensus 180 ~~a~~-------~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 180 REAAQ-------RHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp HHHHH-------HH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EEEHHHHHHHH
T ss_pred HHHHh-------cCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEECHHHHHhhC
Confidence 99863 248999999999999953331 1 33 4455556666556667777889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3e-11 Score=126.20 Aligned_cols=126 Identities=25% Similarity=0.215 Sum_probs=90.8
Q ss_pred HhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCC
Q 016468 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNR 93 (389)
Q Consensus 14 ~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~ 93 (389)
.+|+.|+.|++++|++.|+ |+||+||. +|.. ..|. .+|+++.++
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~---~G~~------------------~~~~----~aE~ll~~~---------- 120 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQA---AGRP------------------ELYR----QAETLVSTG---------- 120 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECC---CCCC------------------cccc----HHHHHHHhc----------
Confidence 5899999999999999998 79999985 3210 1122 478877643
Q ss_pred CCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCc
Q 016468 94 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 173 (389)
Q Consensus 94 ~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 173 (389)
+++++++|+++||||+......+++..+..... .++.+.++|++|++++++.+++ .+ ..|
T Consensus 121 -~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al~-----------~~-~~G- 180 (699)
T PRK12320 121 -WAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKV------SARPIRVLHLDDLVRFLVLALN-----------TD-RNG- 180 (699)
T ss_pred -CCCEEEEeCceecCCCCcccHhHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHHh-----------CC-CCC-
Confidence 488999999999999765433333333322110 1233456999999999999986 21 124
Q ss_pred eEEEeCCCCCChHHHHHHHHHh
Q 016468 174 PYFVSDGFPINTFEFIGPLLKT 195 (389)
Q Consensus 174 ~y~i~~~~~~s~~e~~~~l~~~ 195 (389)
+|||++++.+|+.|+++.+...
T Consensus 181 iyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 181 VVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred EEEEeCCCeeEHHHHHHHHHHh
Confidence 9999999999999998888665
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.31 E-value=5e-12 Score=120.66 Aligned_cols=181 Identities=22% Similarity=0.206 Sum_probs=115.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCC----CCC-CCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNES----LPY-FPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~----~p~-~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++.....||.||.++++.|...+.|.++|+||++ |+........+++ ++. .......++|++||+.||.+++
T Consensus 102 ~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsis-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr 180 (382)
T COG3320 102 FPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSIS-VGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVR 180 (382)
T ss_pred CcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeee-eccccccCCCccccccccccccccCccCCCcchhHHHHHHHHH
Confidence 477889999999999999999999999999999999 5665444433322 221 2234557999999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
++.. .|++++|+||+.|-|+...+ ++.+++..+......+ +.....+.+.+|++++++...+.
T Consensus 181 ~A~~--------rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P---~~~~~~~~~p~~~v~~~v~~~~~ 249 (382)
T COG3320 181 EAGD--------RGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP---DSEYSLDMLPVDHVARAVVAPSV 249 (382)
T ss_pred HHhh--------cCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC---CcccchhhCccceeeEEeehhhh
Confidence 9974 59999999999999987743 2334444433322222 22444566666655555444333
Q ss_pred cccCCCCCCCC-CCCCCCceEE-EeCCCCCChHHHHHHHHH--hCCCCC
Q 016468 156 GLLDDIPGQKG-RPIASGQPYF-VSDGFPINTFEFIGPLLK--TLDYDL 200 (389)
Q Consensus 156 ~l~~~~~~~~~-~~~~~g~~y~-i~~~~~~s~~e~~~~l~~--~lg~~~ 200 (389)
...+.. ..=+ ++...-..|+ ..-|..+...++.+.+.+ ..+++.
T Consensus 250 ~~~~~~-~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~~~~a~~~~ 297 (382)
T COG3320 250 QVAEAI-AALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLISLDIAGYPE 297 (382)
T ss_pred hHHHHH-HHhccCccchhhheecccCCCccchhHHHHhHhhhhccCCch
Confidence 221000 0000 1111112333 233778999999988887 455443
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.2e-11 Score=107.30 Aligned_cols=227 Identities=19% Similarity=0.208 Sum_probs=151.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCC---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGI---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gv---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
-++..-+|...||..|++|.+..+. -||-+.||.. .||.....|-.|.+|.-| .++|+.+|-.+-=++..+.
T Consensus 125 lpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSE-lyGkv~e~PQsE~TPFyP----RSPYa~aKmy~~WivvNyR 199 (376)
T KOG1372|consen 125 LPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSE-LYGKVQEIPQSETTPFYP----RSPYAAAKMYGYWIVVNYR 199 (376)
T ss_pred cccceeeccchhhhhHHHHHHhcCcccceeEEecccHh-hcccccCCCcccCCCCCC----CChhHHhhhhheEEEEEhH
Confidence 3556678888999999999988753 2788999988 899888888899999988 8999999987755544443
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC----CC----HHHHHHHHHcCC-CcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE----RH----LPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~----~~----~~~li~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
. .+++-.|- +..|-.+.. .+ +.+-+..+..|+ ..+..|+-+..+||-|..|-++|+.+.++
T Consensus 200 E-------AYnmfAcN---GILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ 269 (376)
T KOG1372|consen 200 E-------AYNMFACN---GILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQ 269 (376)
T ss_pred H-------hhcceeec---cEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHh
Confidence 1 13444442 334433221 23 333444444454 34566888999999999999999999987
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCcc--ccCHHHHHHHHHHHHHHHHHhhhccccccC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWL 233 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~--~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~ 233 (389)
+ .. ..-|-|..|+..|++||++.-....|...... .+... ...--+ .-+--.
T Consensus 270 ~-----------d~--PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~-----------~~n~~g--~v~V~v 323 (376)
T KOG1372|consen 270 Q-----------DS--PDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEV-----------GKNDDG--VVRVKV 323 (376)
T ss_pred c-----------CC--CCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccc-----------cccCCc--eEEEEe
Confidence 3 21 23578999999999999998877777331100 00000 000000 000000
Q ss_pred CCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHH
Q 016468 234 PQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISY 279 (389)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~ 279 (389)
.+.-..|.|+..+ .-|.+|+++.|||+|++++.+-+++++..
T Consensus 324 ~~kYyRPtEVd~L----qGdasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 324 DPKYYRPTEVDTL----QGDASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred cccccCcchhhhh----cCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 1122345566655 57899999999999999999999998864
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-10 Score=101.96 Aligned_cols=209 Identities=21% Similarity=0.111 Sum_probs=142.8
Q ss_pred hhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFK 89 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~ 89 (389)
+.-.-+..|..|.++-..+- .+.+|.+|.++ +|-......++|+.+... .|..++--..-|...+..+
T Consensus 100 v~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva-~y~pS~s~eY~e~~~~qg----fd~~srL~l~WE~aA~~~~----- 169 (315)
T KOG3019|consen 100 VKGSRIRVTSKLADAINNAPQEARPTVLVSGVA-VYVPSESQEYSEKIVHQG----FDILSRLCLEWEGAALKAN----- 169 (315)
T ss_pred hhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeE-EeccccccccccccccCC----hHHHHHHHHHHHHHhhccC-----
Confidence 34445566788888887763 45799999988 788777777788776544 5666665556666666655
Q ss_pred CCCCCCceEEEEecCceecCCCCCCHHHHHHHHH--cCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCC
Q 016468 90 KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK--LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 167 (389)
Q Consensus 90 ~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~--~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 167 (389)
...+++++|.+.|.|.+..- +..|+--.+ .|. -+|+|+|.+.|||++|++..+..+++ +
T Consensus 170 ----~~~r~~~iR~GvVlG~gGGa-~~~M~lpF~~g~GG---PlGsG~Q~fpWIHv~DL~~li~~ale-----------~ 230 (315)
T KOG3019|consen 170 ----KDVRVALIRIGVVLGKGGGA-LAMMILPFQMGAGG---PLGSGQQWFPWIHVDDLVNLIYEALE-----------N 230 (315)
T ss_pred ----cceeEEEEEEeEEEecCCcc-hhhhhhhhhhccCC---cCCCCCeeeeeeehHHHHHHHHHHHh-----------c
Confidence 34899999999999998752 222222222 233 24899999999999999999999998 4
Q ss_pred CCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhc
Q 016468 168 PIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 247 (389)
Q Consensus 168 ~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (389)
+...| +.|-+.+++++..||.+.+..+++.+ ..+++|...+.++ + .|+....+-
T Consensus 231 ~~v~G-ViNgvAP~~~~n~Ef~q~lg~aL~Rp-~~~pvP~fvvqA~--f----------------------G~erA~~vL 284 (315)
T KOG3019|consen 231 PSVKG-VINGVAPNPVRNGEFCQQLGSALSRP-SWLPVPDFVVQAL--F----------------------GPERATVVL 284 (315)
T ss_pred CCCCc-eecccCCCccchHHHHHHHHHHhCCC-cccCCcHHHHHHH--h----------------------CccceeEEe
Confidence 44444 78888899999999999999999976 3455665433221 1 011111121
Q ss_pred cccccchHHHHHhCCCCCCC-ChHHHHHHH
Q 016468 248 VTHYFSLLKAKDELCYVPIV-SPREGMAAT 276 (389)
Q Consensus 248 ~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~ 276 (389)
.+...-..|+. ++||+.++ ..++++++.
T Consensus 285 eGqKV~Pqral-~~Gf~f~yp~vk~Al~~i 313 (315)
T KOG3019|consen 285 EGQKVLPQRAL-ELGFEFKYPYVKDALRAI 313 (315)
T ss_pred eCCcccchhHh-hcCceeechHHHHHHHHH
Confidence 22234456666 48999887 467777654
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-09 Score=95.64 Aligned_cols=220 Identities=15% Similarity=0.105 Sum_probs=150.9
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.|.....+||+.|..|+++.|++++. ++...||+++ ||.....+-+.+.. .+.+.+.||.||.-||-+-..++.
T Consensus 126 E~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGA-FGPtSPRNPTPdlt---IQRPRTIYGVSKVHAEL~GEy~~h 200 (366)
T KOG2774|consen 126 ETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGA-FGPTSPRNPTPDLT---IQRPRTIYGVSKVHAELLGEYFNH 200 (366)
T ss_pred ccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccc-cCCCCCCCCCCCee---eecCceeechhHHHHHHHHHHHHh
Confidence 345556678999999999999999998 6888999995 88655443333322 244589999999999998888763
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC-----CC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE-----RH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..|++.-.+|.+.+...... .. +.-+-.+..+|+ ...+-.++.+..+.|.+|+..+++..+.+.
T Consensus 201 -------rFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk-~tCylrpdtrlpmmy~~dc~~~~~~~~~a~-- 270 (366)
T KOG2774|consen 201 -------RFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGK-HTCYLRPDTRLPMMYDTDCMASVIQLLAAD-- 270 (366)
T ss_pred -------hcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCC-cccccCCCccCceeehHHHHHHHHHHHhCC--
Confidence 37899999999998864221 22 333444556666 455667888999999999999999887631
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
+.....++||+++ -..|-.|+++.+.+.+. .+.+.+. ..+
T Consensus 271 -------~~~lkrr~ynvt~-~sftpee~~~~~~~~~p----~~~i~y~----------------------------~~s 310 (366)
T KOG2774|consen 271 -------SQSLKRRTYNVTG-FSFTPEEIADAIRRVMP----GFEIDYD----------------------------ICT 310 (366)
T ss_pred -------HHHhhhheeeece-eccCHHHHHHHHHhhCC----Cceeecc----------------------------cch
Confidence 3344567899875 45888999999888762 1221110 011
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
+....+ .....+|.+.++++-.|+-.+.+..-+.-++.--+
T Consensus 311 rq~iad-~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~~~ 351 (366)
T KOG2774|consen 311 RQSIAD-SWPMSLDDSEARTEWHEKHSLHLLSIISTVVAVHK 351 (366)
T ss_pred hhhhhh-hcccccCchhHhhHHHHhhhhhHHHHHHHHHHHHH
Confidence 111111 22336899999998888877666666655555433
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.1e-09 Score=103.27 Aligned_cols=174 Identities=22% Similarity=0.260 Sum_probs=123.0
Q ss_pred chhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCcee----------cCCcccCC------CCCCCC------CCC--CC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVV----------FGGKEIVN------GNESLP------YFP--ID 63 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vv----------yg~~~~~~------~~E~~p------~~p--~~ 63 (389)
.+....+|+.||+++++.|++. +.+-+||+||..+- |......+ .+|+.. ..| ..
T Consensus 123 l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~ 202 (467)
T KOG1221|consen 123 LDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLG 202 (467)
T ss_pred hhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcC
Confidence 3445678999999999999998 68899999998743 11111000 111110 000 12
Q ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC---------HHHHHHHHHcCCCcceecCC
Q 016468 64 EHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEP 134 (389)
Q Consensus 64 ~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---------~~~li~~~~~g~~~~~~g~~ 134 (389)
++.+.|.-||+.+|+++.+.. .++|.+|+||+.|...-...+ ...++-...+|......+|+
T Consensus 203 ~~PNTYtfTKal~E~~i~~~~---------~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~~~~d~ 273 (467)
T KOG1221|consen 203 GWPNTYTFTKALAEMVIQKEA---------ENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRCFLVDP 273 (467)
T ss_pred CCCCceeehHhhHHHHHHhhc---------cCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEEEEEcc
Confidence 457999999999999999987 579999999999998644322 11233344566666677899
Q ss_pred CccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCC--CCCChHHHHHHHHHhCC
Q 016468 135 SVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLD 197 (389)
Q Consensus 135 ~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~--~~~s~~e~~~~l~~~lg 197 (389)
+...|+|.||.+|.+++.++-+...+ .+...-.+||++++ .++++.++.+...+...
T Consensus 274 ~~~adiIPvD~vvN~~ia~~~~~~~~------~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 274 KAVADIIPVDMVVNAMIASAWQHAGN------SKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred ccccceeeHHHHHHHHHHHHHHHhcc------CCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 99999999999999999777432211 11133569999864 68999999999988875
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=101.53 Aligned_cols=145 Identities=19% Similarity=0.139 Sum_probs=97.6
Q ss_pred hhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Q 016468 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKK 90 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~ 90 (389)
..+++|..++.++++++++.+++|+|++||.+ +||.....+.++ ++.+. +....|..+|..+|+++.+.
T Consensus 103 ~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~-v~g~~~~~~~~~--~~~~~-~~~~~~~~~k~~~e~~l~~~------- 171 (251)
T PLN00141 103 APWKVDNFGTVNLVEACRKAGVTRFILVSSIL-VNGAAMGQILNP--AYIFL-NLFGLTLVAKLQAEKYIRKS------- 171 (251)
T ss_pred CceeeehHHHHHHHHHHHHcCCCEEEEEcccc-ccCCCcccccCc--chhHH-HHHHHHHHHHHHHHHHHHhc-------
Confidence 34578999999999999999999999999998 687432211111 11110 11233456799999887643
Q ss_pred CCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 016468 91 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA 170 (389)
Q Consensus 91 ~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~ 170 (389)
+++++++||+.++++.... ... ..........+++.+|+|+++..++. .+..
T Consensus 172 ----gi~~~iirpg~~~~~~~~~------------~~~-~~~~~~~~~~~i~~~dvA~~~~~~~~-----------~~~~ 223 (251)
T PLN00141 172 ----GINYTIVRPGGLTNDPPTG------------NIV-MEPEDTLYEGSISRDQVAEVAVEALL-----------CPES 223 (251)
T ss_pred ----CCcEEEEECCCccCCCCCc------------eEE-ECCCCccccCcccHHHHHHHHHHHhc-----------Chhh
Confidence 5999999999999864321 111 11111122357999999999999987 4445
Q ss_pred CCceEEEeC---CCCCChHHHHHHHHH
Q 016468 171 SGQPYFVSD---GFPINTFEFIGPLLK 194 (389)
Q Consensus 171 ~g~~y~i~~---~~~~s~~e~~~~l~~ 194 (389)
.+.++.+.+ +...++.|+...+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 224 SYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 567788775 334788888877654
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.9e-09 Score=98.27 Aligned_cols=148 Identities=19% Similarity=0.142 Sum_probs=104.5
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++ ++.+.+++|++||..+.. ..| + ...|+.||+..|.++..+
T Consensus 99 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------~~~--~----~~~Y~~sK~a~~~~~~~l 162 (276)
T PRK06482 99 QIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI----------AYP--G----FSLYHATKWGIEGFVEAV 162 (276)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc----------CCC--C----CchhHHHHHHHHHHHHHH
Confidence 34667889999999999998 566788999999976411 111 1 578999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCce---ecCCCCC----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAI---YGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~I---yGp~~~~----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
.... ...|++++++||+.+ ||++... ....+.+.+..+.. . -+.+++|+++++
T Consensus 163 ~~~~----~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~d~~~~~~a~ 228 (276)
T PRK06482 163 AQEV----APFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF-A---------IPGDPQKMVQAM 228 (276)
T ss_pred HHHh----hccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC-C---------CCCCHHHHHHHH
Confidence 5210 235899999999988 7764321 01122233332221 1 135789999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCC
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 197 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg 197 (389)
+.+++ .+ ..+..|++++++..+..|+++.+.+.++
T Consensus 229 ~~~~~-----------~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 229 IASAD-----------QT-PAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHc-----------CC-CCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 99986 22 2356799999999999999888887774
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.2e-09 Score=91.45 Aligned_cols=108 Identities=25% Similarity=0.350 Sum_probs=79.9
Q ss_pred hhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 016468 17 INGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCL 96 (389)
Q Consensus 17 v~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl 96 (389)
...+++++++|+++|++|+|++||.+ +|+.......++..+ ....|...|..+|+.+.+. ++
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~~e~~~~~~-----------~~ 136 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAG-VYRDPPGLFSDEDKP------IFPEYARDKREAEEALRES-----------GL 136 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETT-GTTTCTSEEEGGTCG------GGHHHHHHHHHHHHHHHHS-----------TS
T ss_pred ccccccccccccccccccceeeeccc-cCCCCCccccccccc------chhhhHHHHHHHHHHHHhc-----------CC
Confidence 77899999999999999999999999 566332211111111 1257899999999999643 59
Q ss_pred eEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 97 YTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 97 ~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+++++||+.+||+.... . .....++....++||++|+|++++.+++
T Consensus 137 ~~~ivrp~~~~~~~~~~------------~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 137 NWTIVRPGWIYGNPSRS------------Y-RLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp EEEEEEESEEEBTTSSS------------E-EEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred CEEEEECcEeEeCCCcc------------e-eEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 99999999999986441 0 1111144556799999999999999886
|
... |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.8e-08 Score=92.99 Aligned_cols=137 Identities=15% Similarity=0.078 Sum_probs=92.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+.++++|+.|+.++++++... .-.+++.+|+.. +..|..| ...|+.||+.+|.+++.+.
T Consensus 108 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~Y~~sK~~~~~~~~~l~ 171 (249)
T PRK09135 108 QWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH------------AERPLKG----YPVYCAAKAALEMLTRSLA 171 (249)
T ss_pred HHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh------------hcCCCCC----chhHHHHHHHHHHHHHHHH
Confidence 45778899999999999999753 123455555532 2233333 6899999999999999875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHH-HHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS-LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~-~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.+ ...+++++++||+.++||.....++.... ....+.... .+.+++|+++++..++..
T Consensus 172 ~~-----~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~~~~------- 230 (249)
T PRK09135 172 LE-----LAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLK---------RIGTPEDIAEAVRFLLAD------- 230 (249)
T ss_pred HH-----HCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcC---------CCcCHHHHHHHHHHHcCc-------
Confidence 32 11369999999999999986533333332 222222111 123589999999766641
Q ss_pred CCCCCCCCCceEEEeCCCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|++|++++|+.++
T Consensus 231 ---~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 231 ---ASFITGQILAVDGGRSLT 248 (249)
T ss_pred ---cccccCcEEEECCCeecc
Confidence 233478999999988765
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=7.8e-09 Score=96.32 Aligned_cols=145 Identities=14% Similarity=0.192 Sum_probs=96.3
Q ss_pred cchhhhHhhhhH----HHHHHHHH-HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNING----TCHVIEAC-LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~g----t~nll~aa-~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.+ +.++++++ ++.+.+++|++||....++ .+ ....|+.+|...|.+++.
T Consensus 107 ~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~----------~~------~~~~y~~sk~a~~~~~~~ 170 (262)
T PRK13394 107 DWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA----------SP------LKSAYVTAKHGLLGLARV 170 (262)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC----------CC------CCcccHHHHHHHHHHHHH
Confidence 355677899999 77888888 7778899999999764211 11 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc---CCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL---GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~---g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+..+. ...+++++++||+.+++|......+........ .....+++.+....+|+|++|++++++.++...
T Consensus 171 la~~~----~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~-- 244 (262)
T PRK13394 171 LAKEG----AKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFP-- 244 (262)
T ss_pred HHHHh----hhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCcc--
Confidence 65321 225799999999999998643222221110000 000012233445678999999999999998621
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 245 -------~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 245 -------SAALTGQSFVVSHGW 259 (262)
T ss_pred -------ccCCcCCEEeeCCce
Confidence 233468888888764
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.4e-08 Score=94.22 Aligned_cols=141 Identities=15% Similarity=0.167 Sum_probs=94.5
Q ss_pred chhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+...++|+.|+.+++++| ++.+++++|++||..++ .+. + ....|+.+|...|.++..+.
T Consensus 102 ~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~-~~~---------~------~~~~y~~sk~a~~~~~~~~~ 165 (255)
T TIGR01963 102 WDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL-VAS---------P------FKSAYVAAKHGLIGLTKVLA 165 (255)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc-CCC---------C------CCchhHHHHHHHHHHHHHHH
Confidence 4566789999988888887 56678899999997642 211 1 14789999999998887664
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcc-------eecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPF-------KIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~-------~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+ + ...+++++++||+.++|+.....++.. .. +.... ....+.+..+++|++|+|++++.+++..
T Consensus 166 ~~-~---~~~~i~v~~i~pg~v~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~ 237 (255)
T TIGR01963 166 LE-V---AAHGITVNAICPGYVRTPLVEKQIADQ---AK-TRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA 237 (255)
T ss_pred HH-h---hhcCeEEEEEecCccccHHHHHHHHhh---hc-ccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence 21 1 124799999999999988532211111 11 11000 0122345568999999999999998621
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.|++.+|..
T Consensus 238 ---------~~~~~g~~~~~~~g~~ 253 (255)
T TIGR01963 238 ---------AAGITGQAIVLDGGWT 253 (255)
T ss_pred ---------ccCccceEEEEcCccc
Confidence 1234688999987654
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.8e-08 Score=88.83 Aligned_cols=138 Identities=16% Similarity=0.110 Sum_probs=96.0
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++ ++.+++++|++||..+.++. .+ ...|+.+|+..|.++..+
T Consensus 107 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~------------~~----~~~y~~sK~~~~~~~~~~ 170 (249)
T PRK12825 107 EWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW------------PG----RSNYAAAKAGLVGLTKAL 170 (249)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC------------CC----chHHHHHHHHHHHHHHHH
Confidence 34667889999999999998 45678999999998853221 11 478999999999888766
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...+++++++||+.++|+............. ... .....+++.+|+++++..++...
T Consensus 171 ~~~~----~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~dva~~~~~~~~~~------ 231 (249)
T PRK12825 171 AREL----AEYGITVNMVAPGDIDTDMKEATIEEAREAK--DAE-------TPLGRSGTPEDIARAVAFLCSDA------ 231 (249)
T ss_pred HHHH----hhcCeEEEEEEECCccCCccccccchhHHhh--hcc-------CCCCCCcCHHHHHHHHHHHhCcc------
Confidence 4310 2258999999999999987553222111111 000 11123899999999999988521
Q ss_pred CCCCCCCCCceEEEeCCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.|++++|.++
T Consensus 232 ---~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 232 ---SDYITGQVIEVTGGVDV 248 (249)
T ss_pred ---ccCcCCCEEEeCCCEee
Confidence 22457999999988654
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-07 Score=83.09 Aligned_cols=123 Identities=22% Similarity=0.239 Sum_probs=88.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+....+++|-....|-..++.+.||+||+|+|... || --|+.| ..|-.+|..||.-+++..
T Consensus 129 gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d--~~---------~~~~i~-----rGY~~gKR~AE~Ell~~~-- 190 (283)
T KOG4288|consen 129 GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD--FG---------LPPLIP-----RGYIEGKREAEAELLKKF-- 190 (283)
T ss_pred cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh--cC---------CCCccc-----hhhhccchHHHHHHHHhc--
Confidence 466778899999999999999999999999999754 22 112233 589999999999888874
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC----C---HHHHHHHHHcCCC---cceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER----H---LPRIVSLAKLGLV---PFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~----~---~~~li~~~~~g~~---~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+++-+++||+.|||...-. . +...+.++.++.. -.++--+.-....|.++++|.+.+.|++
T Consensus 191 --------~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~ 261 (283)
T KOG4288|consen 191 --------RFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIE 261 (283)
T ss_pred --------CCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhcc
Confidence 4778999999999984321 1 1223333333321 1122233456789999999999999997
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.4e-08 Score=91.72 Aligned_cols=142 Identities=13% Similarity=0.133 Sum_probs=91.9
Q ss_pred cchhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.+ ++++++++++.+++++|++||...+++. .+ .+.|+.+|+..+.+...+
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~----~~~y~~~k~a~~~~~~~l 167 (258)
T PRK12429 104 KWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS------------AG----KAAYVSAKHGLIGLTKVV 167 (258)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC------------CC----cchhHHHHHHHHHHHHHH
Confidence 345567899999 5555555566788999999998753321 11 578999999999888766
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCc-----ceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP-----FKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~-----~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.... ...++++.++||+.+++|.....+...... .+... ..++......++++++|+++++..++...
T Consensus 168 ~~~~----~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~- 240 (258)
T PRK12429 168 ALEG----ATHGVTVNAICPGYVDTPLVRKQIPDLAKE--RGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA- 240 (258)
T ss_pred HHHh----cccCeEEEEEecCCCcchhhhhhhhhhccc--cCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc-
Confidence 4211 235799999999999988643222211110 01100 01222334467999999999999887521
Q ss_pred CCCCCCCCCCCCCCceEEEeCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.|++.+|
T Consensus 241 --------~~~~~g~~~~~~~g 254 (258)
T PRK12429 241 --------AKGVTGQAWVVDGG 254 (258)
T ss_pred --------ccCccCCeEEeCCC
Confidence 23446888888766
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.6e-08 Score=93.93 Aligned_cols=151 Identities=11% Similarity=-0.022 Sum_probs=101.2
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++ ++.+.+++|++||..+ +.+. + ....|+.||+..|.+...
T Consensus 99 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~-~~~~---------~------~~~~Y~~sKaa~~~~~~~ 162 (275)
T PRK08263 99 SEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGG-ISAF---------P------MSGIYHASKWALEGMSEA 162 (275)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh-cCCC---------C------CccHHHHHHHHHHHHHHH
Confidence 356778899999998888876 5567889999999875 3211 1 146899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC---------HHHHHHHHHcCCCcceecCCCccccc-eeHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDW-IYVDNLVLALIL 152 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---------~~~li~~~~~g~~~~~~g~~~~~~~~-v~vdDla~a~~~ 152 (389)
+.... ...|+++.++||+.+..+..... ...+...... ......+ ++.+|++++++.
T Consensus 163 la~e~----~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~dva~~~~~ 229 (275)
T PRK08263 163 LAQEV----AEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPEAAAEALLK 229 (275)
T ss_pred HHHHh----hhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHHHHHHHHHH
Confidence 64210 23689999999998876533110 1111111111 1112234 889999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 197 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg 197 (389)
+++ .+...++.++.+++.++++.++.+.+.+..+
T Consensus 230 l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 230 LVD-----------AENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HHc-----------CCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 987 4445555554445578889999888877543
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.5e-07 Score=86.12 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=104.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.....++|+.++.++++++.+. +..++|++||..+ +.+ .+ + .+.|+.+|+..|.+++.+
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~-~~~---------~~--~----~~~Y~~sK~a~~~~~~~~ 173 (276)
T PRK05875 110 AWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA-SNT---------HR--W----FGAYGVTKSAVDHLMKLA 173 (276)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh-cCC---------CC--C----CcchHHHHHHHHHHHHHH
Confidence 34667889999999999988654 3458999999773 211 11 1 578999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
... ....+++++++||+.+.++...... ........... ....+.+++|+++++..+++..
T Consensus 174 ~~~----~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~---- 236 (276)
T PRK05875 174 ADE----LGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACT---------PLPRVGEVEDVANLAMFLLSDA---- 236 (276)
T ss_pred HHH----hcccCeEEEEEecCccCCccccccccCHHHHHHHHcCC---------CCCCCcCHHHHHHHHHHHcCch----
Confidence 532 1235799999999999776432111 11111111111 1123678999999999988621
Q ss_pred CCCCCCCCCCCceEEEeCCCCC----ChHHHHHHHHHhCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPI----NTFEFIGPLLKTLDY 198 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~----s~~e~~~~l~~~lg~ 198 (389)
.....|+.+++.++..+ +..|+++.+.+..|.
T Consensus 237 -----~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 237 -----ASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred -----hcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 12345899999988776 889998888766553
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.7e-07 Score=85.22 Aligned_cols=137 Identities=18% Similarity=0.157 Sum_probs=94.3
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++. +.+.+++|++||..+ ++ .+..+ ...|+.+|+..|.++..+
T Consensus 106 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~-~~----------~~~~~----~~~y~~sK~a~~~~~~~~ 170 (251)
T PRK12826 106 QWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG-PR----------VGYPG----LAHYAASKAGLVGFTRAL 170 (251)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHh-hc----------cCCCC----ccHHHHHHHHHHHHHHHH
Confidence 456788999999999999984 456789999999774 20 11111 468999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHH-HHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRI-VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~l-i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... + ...+++++++||+.++||......... ...+..+.+. ..+++++|+++++..++...
T Consensus 171 ~~~-~---~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~----- 232 (251)
T PRK12826 171 ALE-L---AARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL---------GRLGEPEDIAAAVLFLASDE----- 232 (251)
T ss_pred HHH-H---HHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc-----
Confidence 421 0 124799999999999999654322221 2222222211 15899999999999877521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 233 ----~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 233 ----ARYITGQTLPVDGGA 247 (251)
T ss_pred ----ccCcCCcEEEECCCc
Confidence 123478999987765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.4e-08 Score=90.85 Aligned_cols=148 Identities=18% Similarity=0.105 Sum_probs=98.3
Q ss_pred hhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 016468 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRK 94 (389)
Q Consensus 15 vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~ 94 (389)
.......|+++||+++||++||+.|.... + ++.....| ....-..|...|+.+++.
T Consensus 78 ~~~~~~~~li~Aa~~agVk~~v~ss~~~~-~--------~~~~~~~p----~~~~~~~k~~ie~~l~~~----------- 133 (233)
T PF05368_consen 78 SELEQQKNLIDAAKAAGVKHFVPSSFGAD-Y--------DESSGSEP----EIPHFDQKAEIEEYLRES----------- 133 (233)
T ss_dssp CHHHHHHHHHHHHHHHT-SEEEESEESSG-T--------TTTTTSTT----HHHHHHHHHHHHHHHHHC-----------
T ss_pred hhhhhhhhHHHhhhccccceEEEEEeccc-c--------cccccccc----cchhhhhhhhhhhhhhhc-----------
Confidence 34667899999999999999997554332 1 12222222 234557899999999875
Q ss_pred CceEEEEecCceecCCCCCCHHHHHHHHHcC-CCcceecCCCccccce-eHHHHHHHHHHHHhcccCCCCCCCCCCCC--
Q 016468 95 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLG-LVPFKIGEPSVKTDWI-YVDNLVLALILASMGLLDDIPGQKGRPIA-- 170 (389)
Q Consensus 95 gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g-~~~~~~g~~~~~~~~v-~vdDla~a~~~a~~~l~~~~~~~~~~~~~-- 170 (389)
+++++++||+..+..-.....+ ....... ....+.++++....++ ..+|+++++..++. .+..
T Consensus 134 ~i~~t~i~~g~f~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~-----------~p~~~~ 200 (233)
T PF05368_consen 134 GIPYTIIRPGFFMENLLPPFAP--VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILL-----------DPEKHN 200 (233)
T ss_dssp TSEBEEEEE-EEHHHHHTTTHH--TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHH-----------SGGGTT
T ss_pred cccceeccccchhhhhhhhhcc--cccccccceEEEEccCCCccccccccHHHHHHHHHHHHc-----------ChHHhc
Confidence 5999999999766321110000 0001111 1245667888777775 99999999999997 3322
Q ss_pred CCceEEEeCCCCCChHHHHHHHHHhCCCCC
Q 016468 171 SGQPYFVSDGFPINTFEFIGPLLKTLDYDL 200 (389)
Q Consensus 171 ~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~ 200 (389)
.|+.+++++ +.+|..|+++.+.+.+|.+.
T Consensus 201 ~~~~~~~~~-~~~t~~eia~~~s~~~G~~v 229 (233)
T PF05368_consen 201 NGKTIFLAG-ETLTYNEIAAILSKVLGKKV 229 (233)
T ss_dssp EEEEEEEGG-GEEEHHHHHHHHHHHHTSEE
T ss_pred CCEEEEeCC-CCCCHHHHHHHHHHHHCCcc
Confidence 467777655 77999999999999999763
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=4.3e-07 Score=83.42 Aligned_cols=135 Identities=19% Similarity=0.149 Sum_probs=94.2
Q ss_pred chhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+..++.|+.++.++++++. +.+++++|++||....++. .+ ...|+.+|...|.++..+.
T Consensus 106 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~------------~~----~~~y~~sk~~~~~~~~~l~ 169 (246)
T PRK05653 106 WDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN------------PG----QTNYSAAKAGVIGFTKALA 169 (246)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC------------CC----CcHhHhHHHHHHHHHHHHH
Confidence 45678899999999999995 5678899999997643221 11 4789999999998888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.. ..+.+++++++||+.++|+........+........ ....+++++|+++++..++...
T Consensus 170 ~~----~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~~~~~~------- 229 (246)
T PRK05653 170 LE----LASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI---------PLGRLGQPEEVANAVAFLASDA------- 229 (246)
T ss_pred HH----HhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCch-------
Confidence 31 123589999999999999866432222222222111 1145789999999999987521
Q ss_pred CCCCCCCCceEEEeCCC
Q 016468 165 KGRPIASGQPYFVSDGF 181 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 230 --~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 230 --ASYITGQVIPVNGGM 244 (246)
T ss_pred --hcCccCCEEEeCCCe
Confidence 234568899988875
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.8e-07 Score=86.47 Aligned_cols=142 Identities=15% Similarity=0.110 Sum_probs=92.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+++..+++|+.++.++++++.+.- ..++|++||..+.+.+. .+..+ ....|+.||+.+|.+++.+..
T Consensus 101 ~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~-----~~~~~------~~~~Y~~sK~a~e~~~~~l~~ 169 (248)
T PRK07806 101 DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT-----VKTMP------EYEPVARSKRAGEDALRALRP 169 (248)
T ss_pred CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc-----ccCCc------cccHHHHHHHHHHHHHHHHHH
Confidence 456678899999999999998752 35899999965422110 11111 146899999999999988742
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
.. ...++++++++|+.+-++-.. .+... ..+-...........+++++|++++++.+++
T Consensus 170 ~~----~~~~i~v~~v~pg~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~---------- 228 (248)
T PRK07806 170 EL----AEKGIGFVVVSGDMIEGTVTA----TLLNR---LNPGAIEARREAAGKLYTVSEFAAEVARAVT---------- 228 (248)
T ss_pred Hh----hccCeEEEEeCCccccCchhh----hhhcc---CCHHHHHHHHhhhcccCCHHHHHHHHHHHhh----------
Confidence 11 235799999999877654211 11110 0000000000112368999999999999997
Q ss_pred CCCCCCCceEEEeCCCC
Q 016468 166 GRPIASGQPYFVSDGFP 182 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~ 182 (389)
.+...|++|++++++.
T Consensus 229 -~~~~~g~~~~i~~~~~ 244 (248)
T PRK07806 229 -APVPSGHIEYVGGADY 244 (248)
T ss_pred -ccccCccEEEecCccc
Confidence 4456799999998864
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.7e-07 Score=85.80 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=102.3
Q ss_pred hhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 10 GRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
....++|+.++.++++++. +.+.+++|++||... +. ++. ...|+.||+..|.++..+..
T Consensus 102 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~-----------~~~-----~~~y~~sK~a~~~~~~~~a~ 164 (257)
T PRK07074 102 RADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG-MA-----------ALG-----HPAYSAAKAGLIHYTKLLAV 164 (257)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh-cC-----------CCC-----CcccHHHHHHHHHHHHHHHH
Confidence 4456799999999998883 456778999999653 11 000 24799999999999888753
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+. ...+++++++||+.++++..... .+.+....... ....+++|++|+++++..++...
T Consensus 165 ~~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~----- 226 (257)
T PRK07074 165 EY----GRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW---------YPLQDFATPDDVANAVLFLASPA----- 226 (257)
T ss_pred HH----hHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCch-----
Confidence 21 22579999999999998753311 12222222211 12357999999999999998521
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHHHHHHHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLK 194 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~ 194 (389)
.....|+.+++.+|...+++|+++.+.+
T Consensus 227 ----~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 227 ----ARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred ----hcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 2345688999999999999999887643
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.8e-07 Score=91.40 Aligned_cols=145 Identities=11% Similarity=-0.000 Sum_probs=95.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+....+++|+.|+.|++++|++.|++|||++||.++...+. .+ ..+.. ...|...|..+|+.+..
T Consensus 176 d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~-----p~-~~~~s----k~~~~~~KraaE~~L~~----- 240 (576)
T PLN03209 176 DVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF-----PA-AILNL----FWGVLCWKRKAEEALIA----- 240 (576)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc-----cc-cchhh----HHHHHHHHHHHHHHHHH-----
Confidence 34567889999999999999999999999999987411110 11 11111 35688899999999865
Q ss_pred CCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 167 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 167 (389)
.|+++++|||+.++++.+... ..+. +....+.......+..+|+|++++.++.. .
T Consensus 241 ------sGIrvTIVRPG~L~tp~d~~~--------~t~~-v~~~~~d~~~gr~isreDVA~vVvfLasd----------~ 295 (576)
T PLN03209 241 ------SGLPYTIVRPGGMERPTDAYK--------ETHN-LTLSEEDTLFGGQVSNLQVAELMACMAKN----------R 295 (576)
T ss_pred ------cCCCEEEEECCeecCCccccc--------cccc-eeeccccccCCCccCHHHHHHHHHHHHcC----------c
Confidence 369999999999998754311 0011 01111111112358899999999998751 2
Q ss_pred CCCCCceEEEeCCCC---CChHHHHHHH
Q 016468 168 PIASGQPYFVSDGFP---INTFEFIGPL 192 (389)
Q Consensus 168 ~~~~g~~y~i~~~~~---~s~~e~~~~l 192 (389)
....++++.+.++.. ..+.|.+..+
T Consensus 296 ~as~~kvvevi~~~~~p~~~~~~~~~~i 323 (576)
T PLN03209 296 RLSYCKVVEVIAETTAPLTPMEELLAKI 323 (576)
T ss_pred hhccceEEEEEeCCCCCCCCHHHHHHhc
Confidence 235688999887653 3444444443
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=8.9e-08 Score=89.16 Aligned_cols=148 Identities=15% Similarity=0.104 Sum_probs=98.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++++++.... -.++|++||....++. .+ ...|+.||+..|.+++
T Consensus 102 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~ 165 (257)
T PRK07067 102 DSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------AL----VSHYCATKAAVISYTQ 165 (257)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------------CC----CchhhhhHHHHHHHHH
Confidence 3566778999999999999997542 2479999997643321 11 5789999999999887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc---CCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL---GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~---g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
...... ...|+++.+++|+.|+++..+... ..+..... +.....++++.....+.+.+|+++++..++..
T Consensus 166 ~la~e~----~~~gi~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-- 238 (257)
T PRK07067 166 SAALAL----IRHGINVNAIAPGVVDTPMWDQVD-ALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASA-- 238 (257)
T ss_pred HHHHHh----cccCeEEEEEeeCcccchhhhhhh-hhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCc--
Confidence 764211 236899999999999997543211 11111100 00011223444556799999999999998852
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
......|++|++.+|+.++
T Consensus 239 -------~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 239 -------DADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred -------ccccccCcEEeecCCEeCC
Confidence 1234578999998887653
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.5e-07 Score=83.59 Aligned_cols=138 Identities=21% Similarity=0.247 Sum_probs=95.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc-----C-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF-----G-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~-----g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+.+..+++|+.++.++++++.+. + ++++|++||..+.++. .+ .+.|+.||+..|
T Consensus 105 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~----~~~Y~~sK~a~~ 168 (256)
T PRK12745 105 SFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS------------PN----RGEYCISKAGLS 168 (256)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC------------CC----CcccHHHHHHHH
Confidence 45667899999999999998653 1 5689999998753321 11 478999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+++.+..+. ...+++++++||+.++++...............+. . ....+.+.+|+++++..++..
T Consensus 169 ~~~~~l~~~~----~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~d~a~~i~~l~~~- 235 (256)
T PRK12745 169 MAAQLFAARL----AEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGL-V-------PMPRWGEPEDVARAVAALASG- 235 (256)
T ss_pred HHHHHHHHHH----HHhCCEEEEEecCCCcCccccccchhHHhhhhhcC-C-------CcCCCcCHHHHHHHHHHHhCC-
Confidence 9988875310 12579999999999998755433233333222221 1 123577999999999887752
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+.+...|+.|++.++..
T Consensus 236 --------~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 236 --------DLPYSTGQAIHVDGGLS 252 (256)
T ss_pred --------cccccCCCEEEECCCee
Confidence 12335688999988754
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.4e-07 Score=86.38 Aligned_cols=146 Identities=17% Similarity=0.150 Sum_probs=92.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+ .+. ++++++||....++. .+ ...|+.+|+..|.++..
T Consensus 110 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~------------~~----~~~y~~~K~a~~~~~~~ 173 (264)
T PRK12829 110 QWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY------------PG----RTPYAASKWAVVGLVKS 173 (264)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC------------CC----CchhHHHHHHHHHHHHH
Confidence 4577899999999999998843 345 678888886543221 11 35799999999999888
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcce--ecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFK--IGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~--~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.+.. + ...+++++++||+.++|+......+........+..... .........+++++|+++++..++...
T Consensus 174 l~~~-~---~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~--- 246 (264)
T PRK12829 174 LAIE-L---GPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPA--- 246 (264)
T ss_pred HHHH-H---hhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc---
Confidence 6531 0 124799999999999998654322211111110000000 000011235899999999998876410
Q ss_pred CCCCCCCCCCCCceEEEeCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.|++.+|..
T Consensus 247 ------~~~~~g~~~~i~~g~~ 262 (264)
T PRK12829 247 ------ARYITGQAISVDGNVE 262 (264)
T ss_pred ------ccCccCcEEEeCCCcc
Confidence 2344688999988753
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.7e-07 Score=95.16 Aligned_cols=148 Identities=20% Similarity=0.216 Sum_probs=100.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++.+ .+. .++|++||.++++++. ....|+.||+..|.+++
T Consensus 520 ~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~----------------~~~~Y~asKaa~~~l~~ 583 (681)
T PRK08324 520 EDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP----------------NFGAYGAAKAAELHLVR 583 (681)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC----------------CcHHHHHHHHHHHHHHH
Confidence 34567789999999999888753 444 6899999987643310 14789999999999998
Q ss_pred HhCCCCCCCCCCCCceEEEEecCcee-cCCCCCCHHHHHHHHHcCCCcc----eecCCCccccceeHHHHHHHHHHHHhc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIY-GPGEERHLPRIVSLAKLGLVPF----KIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~Iy-Gp~~~~~~~~li~~~~~g~~~~----~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
.+.... ...|+++.+++|+.|| |++.........+....+.... .++.+....++++++|+++++..++..
T Consensus 584 ~la~e~----~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~ 659 (681)
T PRK08324 584 QLALEL----GPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASG 659 (681)
T ss_pred HHHHHh----cccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCc
Confidence 875321 2357999999999999 6542211111111122222211 234556667899999999999998741
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
. .....|+++++.+|...
T Consensus 660 ~---------~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 660 L---------LSKTTGAIITVDGGNAA 677 (681)
T ss_pred c---------ccCCcCCEEEECCCchh
Confidence 1 34557889999888653
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.6e-07 Score=84.38 Aligned_cols=140 Identities=11% Similarity=0.040 Sum_probs=91.5
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++ ++.+.+++|++||...++|. .+ ...|+.||+..|.++..+
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~----~~~Y~~sK~~~~~~~~~l 167 (280)
T PRK06914 104 EYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF------------PG----LSPYVSSKYALEGFSESL 167 (280)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC------------CC----CchhHHhHHHHHHHHHHH
Confidence 44567789999999888886 55677899999997654431 11 478999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC-------------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER-------------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-------------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
... ..+.+++++++||+.++++.... .....+..+.... ......+.+++|+|+++
T Consensus 168 ~~~----~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~ 236 (280)
T PRK06914 168 RLE----LKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI-------NSGSDTFGNPIDVANLI 236 (280)
T ss_pred HHH----hhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH-------hhhhhccCCHHHHHHHH
Confidence 421 02358999999999998873210 0111111111000 01223578999999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChH
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTF 186 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~ 186 (389)
+.+++ ++.. +..|+++++..+++.
T Consensus 237 ~~~~~-----------~~~~-~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 237 VEIAE-----------SKRP-KLRYPIGKGVKLMIL 260 (280)
T ss_pred HHHHc-----------CCCC-CcccccCCchHHHHH
Confidence 99987 2222 246888766655433
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=6.3e-07 Score=82.79 Aligned_cols=136 Identities=18% Similarity=0.157 Sum_probs=91.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC-------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG-------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g-------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
+.+..+++|+.++.++++++.+.- -.++|++||..++++... ....|+.||+..|.++
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------------~~~~Y~~sKaa~~~~~ 168 (248)
T PRK06123 104 RLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------------EYIDYAASKGAIDTMT 168 (248)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------------CccchHHHHHHHHHHH
Confidence 455789999999999999987641 136999999875554210 0246999999999988
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..+.... .+.+++++++||+.|+||... ...+..+.......+.. -+.+++|++++++.++...
T Consensus 169 ~~la~~~----~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~d~a~~~~~l~~~~-- 233 (248)
T PRK06123 169 IGLAKEV----AAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG---------RGGTAEEVARAILWLLSDE-- 233 (248)
T ss_pred HHHHHHh----cccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCcc--
Confidence 8764311 235899999999999998543 22234343333322211 1246899999999887521
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.|++.++
T Consensus 234 -------~~~~~g~~~~~~gg 247 (248)
T PRK06123 234 -------ASYTTGTFIDVSGG 247 (248)
T ss_pred -------ccCccCCEEeecCC
Confidence 22356889988765
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=8.8e-07 Score=83.50 Aligned_cols=121 Identities=15% Similarity=0.181 Sum_probs=80.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.+ .+..++|++||... +.+. + + ...|+.||+..|.++..+
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~-~~~~---------~--~----~~~Y~~sK~a~~~l~~~~ 173 (274)
T PRK07775 110 QFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA-LRQR---------P--H----MGAYGAAKAGLEAMVTNL 173 (274)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh-cCCC---------C--C----cchHHHHHHHHHHHHHHH
Confidence 3455678999999999999863 45568999999763 3321 1 1 468999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC----HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~----~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|++++++||+.+.++-.... ...++..... .+ +.....++|++|+|++++.+++
T Consensus 174 ~~~~----~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~ 238 (274)
T PRK07775 174 QMEL----EGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAE 238 (274)
T ss_pred HHHh----cccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhc
Confidence 5311 23589999999998755422111 1111111111 01 1223568999999999999886
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1e-06 Score=81.42 Aligned_cols=136 Identities=15% Similarity=0.135 Sum_probs=92.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.. .+.+++|++||..+.++. .+ ...|+.||...|.++..
T Consensus 106 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~~ 169 (247)
T PRK12935 106 EDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG------------FG----QTNYSAAKAGMLGFTKS 169 (247)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC------------CC----CcchHHHHHHHHHHHHH
Confidence 45667789999999999999975 345689999997643321 11 47899999998888766
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
...+. ...++++++++|+.|.++...............+ .....+.|++|++++++.+++.
T Consensus 170 l~~~~----~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~------ 230 (247)
T PRK12935 170 LALEL----AKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRD------ 230 (247)
T ss_pred HHHHH----HHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCc------
Confidence 54210 1257999999999998653322211222222212 1234689999999999998751
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.++.
T Consensus 231 ----~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 231 ----GAYITGQQLNINGGL 245 (247)
T ss_pred ----ccCccCCEEEeCCCc
Confidence 223578999998874
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.6e-07 Score=85.08 Aligned_cols=146 Identities=14% Similarity=0.066 Sum_probs=94.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+...++|+.++.++++++.+ .+ -.++|++||....++. + +...|+.||+..+.+++.
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~----------~------~~~~Y~~sKaa~~~l~~~ 167 (259)
T PRK12384 104 DFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS----------K------HNSGYSAAKFGGVGLTQS 167 (259)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC----------C------CCchhHHHHHHHHHHHHH
Confidence 4566789999999888888765 45 3589999997644331 0 146899999998888777
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHc--CCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKL--GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~--g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.++||+.+++++.. ..++.+...... +.......++.....+++.+|+++++..++...
T Consensus 168 la~e~----~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~-- 241 (259)
T PRK12384 168 LALDL----AEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK-- 241 (259)
T ss_pred HHHHH----HHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc--
Confidence 64210 136899999999999876532 222222211100 000011223344567899999999999886521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.|++.+|+.
T Consensus 242 -------~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 242 -------ASYCTGQSINVTGGQV 257 (259)
T ss_pred -------cccccCceEEEcCCEE
Confidence 2235789999988764
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.1e-06 Score=81.39 Aligned_cols=137 Identities=8% Similarity=0.026 Sum_probs=92.4
Q ss_pred hhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 10 GRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+...++|+.++.++++++.+. ..+++|++||..+ +.+ ..+ .+.|+.||+..|.+++.+..+.
T Consensus 109 ~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~~~~~~~~~l~~~~ 172 (252)
T PRK06077 109 DKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG-IRP-----------AYG----LSIYGAMKAAVINLTKYLALEL 172 (252)
T ss_pred HHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc-cCC-----------CCC----chHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999865 2358999999874 321 112 5789999999999999875321
Q ss_pred CCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR 167 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~ 167 (389)
. .++.+.+++|+.|.++..... .......... ...+......+++++|++++++.++. .
T Consensus 173 ----~-~~i~v~~v~Pg~i~t~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~dva~~~~~~~~-----------~ 231 (252)
T PRK06077 173 ----A-PKIRVNAIAPGFVKTKLGESL-FKVLGMSEKE----FAEKFTLMGKILDPEEVAEFVAAILK-----------I 231 (252)
T ss_pred ----h-cCCEEEEEeeCCccChHHHhh-hhcccccHHH----HHHhcCcCCCCCCHHHHHHHHHHHhC-----------c
Confidence 1 378999999999987643211 0000000000 00001112368999999999999986 4
Q ss_pred CCCCCceEEEeCCCCC
Q 016468 168 PIASGQPYFVSDGFPI 183 (389)
Q Consensus 168 ~~~~g~~y~i~~~~~~ 183 (389)
+...|+.|++.+|..+
T Consensus 232 ~~~~g~~~~i~~g~~~ 247 (252)
T PRK06077 232 ESITGQVFVLDSGESL 247 (252)
T ss_pred cccCCCeEEecCCeec
Confidence 4567889999988643
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.6e-06 Score=78.75 Aligned_cols=136 Identities=17% Similarity=0.116 Sum_probs=96.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.+. +.+++|++||..+ |+ + .+.|+.||+..|.+++.+
T Consensus 109 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~--------------~----~~~Y~~sK~a~~~~~~~l 169 (250)
T PRK07774 109 YYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA-WL--------------Y----SNFYGLAKVGLNGLTQQL 169 (250)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc-cC--------------C----ccccHHHHHHHHHHHHHH
Confidence 45567889999999999999854 4569999999874 32 1 468999999999998887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..+. .+.++++++++|+.+..+...... ..+.+.+.++.+.. -+.+++|++++++.++...
T Consensus 170 ~~~~----~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~~~~~----- 231 (250)
T PRK07774 170 AREL----GGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLS---------RMGTPEDLVGMCLFLLSDE----- 231 (250)
T ss_pred HHHh----CccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhChh-----
Confidence 5321 235799999999999877654322 23333444333221 1456899999999987621
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.+...|++|++.+|+.++
T Consensus 232 ----~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 232 ----ASWITGQIFNVDGGQIIR 249 (250)
T ss_pred ----hhCcCCCEEEECCCeecc
Confidence 123468899999887654
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.5e-06 Score=78.45 Aligned_cols=134 Identities=18% Similarity=0.094 Sum_probs=88.3
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++ ++.+..++|++||... ++. + ...|+.||+..|.+++.+
T Consensus 108 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~-------------~----~~~Y~~sK~a~~~~~~~l 169 (260)
T PRK12823 108 QIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIAT-RGI-------------N----RVPYSAAKGGVNALTASL 169 (260)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccc-cCC-------------C----CCccHHHHHHHHHHHHHH
Confidence 34566788998877555544 4566779999999763 321 1 357999999999998877
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC-------------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
.... ...++++++++|+.|++|... ...+.+.+.+..+.+.. -+.+++|+++++
T Consensus 170 a~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~ 236 (260)
T PRK12823 170 AFEY----AEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK---------RYGTIDEQVAAI 236 (260)
T ss_pred HHHh----cccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc---------cCCCHHHHHHHH
Confidence 5321 235899999999999997311 11223333333332221 244689999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
..++.. ......|+.+++.+|+
T Consensus 237 ~~l~s~---------~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 237 LFLASD---------EASYITGTVLPVGGGD 258 (260)
T ss_pred HHHcCc---------ccccccCcEEeecCCC
Confidence 887741 0234578899887765
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.3e-06 Score=79.73 Aligned_cols=123 Identities=20% Similarity=0.196 Sum_probs=81.3
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHH----HHH
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV----AEQ 78 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~----aE~ 78 (389)
+.+..+++|+.|+.++++++. +.+ ..++|++||..+ +.+ ..+ ...|+.||.. +|.
T Consensus 106 ~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~ 169 (275)
T PRK05876 106 DWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAG-LVP-----------NAG----LGAYGVAKYGVVGLAET 169 (275)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhh-ccC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 456678999999999999985 344 468999999774 221 111 5789999997 555
Q ss_pred HHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHH-HHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 79 LVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS-LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 79 ~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~-~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+..++. ..|+++++++|+.+.++...+. ..+.. ...........+......++++++|+|++++.+++
T Consensus 170 l~~e~~--------~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~ 238 (275)
T PRK05876 170 LAREVT--------ADGIGVSVLCPMVVETNLVANS-ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL 238 (275)
T ss_pred HHHHhh--------hcCcEEEEEEeCccccccccch-hhhcCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence 555553 2689999999999987643321 11100 00111111223444455689999999999999997
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.2e-06 Score=78.44 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=92.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.+++++|.. .+.+++|++||...++|.. + ...|+.+|...|.++..
T Consensus 98 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------~----~~~y~~~k~a~~~~~~~ 161 (239)
T TIGR01830 98 EDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------G----QANYAASKAGVIGFTKS 161 (239)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------C----CchhHHHHHHHHHHHHH
Confidence 35577889999999999999976 4567999999987555421 1 46899999999888777
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.++||+.+.++......+.+...+....+. .-+.+++|+++++..++.. +
T Consensus 162 l~~~~----~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~~~~~---~-- 223 (239)
T TIGR01830 162 LAKEL----ASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPL---------GRFGTPEEVANAVAFLASD---E-- 223 (239)
T ss_pred HHHHH----hhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCc---------CCCcCHHHHHHHHHHHhCc---c--
Confidence 54211 2368999999999887653332222233333222211 1256799999999888741 0
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.|++.+|
T Consensus 224 ----~~~~~g~~~~~~~g 237 (239)
T TIGR01830 224 ----ASYITGQVIHVDGG 237 (239)
T ss_pred ----cCCcCCCEEEeCCC
Confidence 23457889998655
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.8e-06 Score=78.96 Aligned_cols=128 Identities=17% Similarity=0.233 Sum_probs=89.3
Q ss_pred chhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+...++|+.++.++++++. +.+++++|++||..+ +++. + + ...|+.+|...|.++....
T Consensus 106 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~---------~--~----~~~y~~sk~a~~~~~~~~a 169 (239)
T PRK12828 106 WDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA-LKAG---------P--G----MGAYAAAKAGVARLTEALA 169 (239)
T ss_pred HHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHh-ccCC---------C--C----cchhHHHHHHHHHHHHHHH
Confidence 34567899999999999885 457889999999874 3321 1 1 4689999999988887654
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
... ...++++.++||+.++++...... + ......+++++|+++++..++...
T Consensus 170 ~~~----~~~~i~~~~i~pg~v~~~~~~~~~---------------~--~~~~~~~~~~~dva~~~~~~l~~~------- 221 (239)
T PRK12828 170 AEL----LDRGITVNAVLPSIIDTPPNRADM---------------P--DADFSRWVTPEQIAAVIAFLLSDE------- 221 (239)
T ss_pred HHh----hhcCeEEEEEecCcccCcchhhcC---------------C--chhhhcCCCHHHHHHHHHHHhCcc-------
Confidence 211 235799999999999987322100 0 011123799999999999888621
Q ss_pred CCCCCCCCceEEEeCCCC
Q 016468 165 KGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+++.
T Consensus 222 --~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 222 --AQAITGASIPVDGGVA 237 (239)
T ss_pred --cccccceEEEecCCEe
Confidence 2234688888877754
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.6e-06 Score=79.13 Aligned_cols=139 Identities=17% Similarity=0.212 Sum_probs=95.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.+. +.+++|++||... .. +.. ....|+.+|...|.+++.+
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~-----------~~~----~~~~y~~sK~a~~~~~~~~ 173 (255)
T PRK07523 110 AFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS-AL-----------ARP----GIAPYTATKGAVGNLTKGM 173 (255)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh-cc-----------CCC----CCccHHHHHHHHHHHHHHH
Confidence 34667889999999999999753 6779999999753 11 111 1578999999999998887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|+++.++||+.+.++...... +.+...+....+ ...+..++|+|.++..++..
T Consensus 174 a~e~----~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~----- 235 (255)
T PRK07523 174 ATDW----AKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP---------AGRWGKVEELVGACVFLASD----- 235 (255)
T ss_pred HHHh----hHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCc-----
Confidence 5211 236899999999999987533211 222222322221 23467899999999888751
Q ss_pred CCCCCCCCCCCceEEEeCCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
......|+.+++.+|..+|
T Consensus 236 ----~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 236 ----ASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred ----hhcCccCcEEEECCCeecc
Confidence 0234568999998886554
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.36 E-value=4.2e-06 Score=76.90 Aligned_cols=136 Identities=15% Similarity=0.138 Sum_probs=92.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++... +.+++|++||...++|.. . ...|+.+|...|.+++.+
T Consensus 106 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------~----~~~y~~sk~a~~~~~~~~ 169 (248)
T PRK05557 106 DWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------G----QANYAASKAGVIGFTKSL 169 (248)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------C----CchhHHHHHHHHHHHHHH
Confidence 34566789999999999998753 567899999976544421 1 468999999999888765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... +..+++++++||+.+.++......+..........+ ...+.+++|+++++..++...
T Consensus 170 a~~~----~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~------ 230 (248)
T PRK05557 170 AREL----ASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIP---------LGRLGQPEEIASAVAFLASDE------ 230 (248)
T ss_pred HHHh----hhhCeEEEEEecCccCCccccccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcc------
Confidence 4210 235899999999988665443333333333332221 123578999999998876520
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.++-
T Consensus 231 ---~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 231 ---AAYITGQTLHVNGGM 245 (248)
T ss_pred ---cCCccccEEEecCCc
Confidence 244578999998764
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.4e-05 Score=74.76 Aligned_cols=148 Identities=20% Similarity=0.166 Sum_probs=108.9
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
..........+..+++. .++++++++|...+ +... ...|.++|..+|+.+.+.
T Consensus 80 ~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~----------~~~~--------~~~~~~~~~~~e~~l~~s-------- 132 (275)
T COG0702 80 FRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGA----------DAAS--------PSALARAKAAVEAALRSS-------- 132 (275)
T ss_pred hhHHHHHHHHHHHHHhc-CCceEEEEeccCCC----------CCCC--------ccHHHHHHHHHHHHHHhc--------
Confidence 34444555555555555 56889999998764 3322 378999999999999876
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
|++.+++|++.+|....... .......+.+....+.+ ..+++.++|++.++..++. .+...
T Consensus 133 ---g~~~t~lr~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~-----------~~~~~ 193 (275)
T COG0702 133 ---GIPYTTLRRAAFYLGAGAAF---IEAAEAAGLPVIPRGIG--RLSPIAVDDVAEALAAALD-----------APATA 193 (275)
T ss_pred ---CCCeEEEecCeeeeccchhH---HHHHHhhCCceecCCCC--ceeeeEHHHHHHHHHHHhc-----------CCccc
Confidence 58889999888776554421 33344445444333433 7899999999999999987 55578
Q ss_pred CceEEEeCCCCCChHHHHHHHHHhCCCCCCcccc
Q 016468 172 GQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWL 205 (389)
Q Consensus 172 g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~ 205 (389)
++.|.+++++..+..|..+.+.+..|.+....+.
T Consensus 194 ~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~~~ 227 (275)
T COG0702 194 GRTYELAGPEALTLAELASGLDYTIGRPVGLIPE 227 (275)
T ss_pred CcEEEccCCceecHHHHHHHHHHHhCCcceeeCC
Confidence 8999999999999999999999999988655333
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.6e-06 Score=77.46 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=91.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+. + .+++|++||...+++. .+ ...|+.||...|.+++.
T Consensus 100 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~----~~~y~~sK~a~~~~~~~ 163 (245)
T PRK07060 100 GFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------PD----HLAYCASKAALDAITRV 163 (245)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------CC----CcHhHHHHHHHHHHHHH
Confidence 45666789999999999999763 2 3689999998753321 01 46899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...+++++++||+.++++...... +.....+... .....+++++|+++++..++...
T Consensus 164 ~a~~~----~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~d~a~~~~~l~~~~--- 227 (245)
T PRK07060 164 LCVEL----GPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA---------IPLGRFAEVDDVAAPILFLLSDA--- 227 (245)
T ss_pred HHHHH----hhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcc---
Confidence 75311 125799999999999988543111 1111111111 11235899999999999988621
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 228 ------~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 228 ------ASMVSGVSLPVDGGY 242 (245)
T ss_pred ------cCCccCcEEeECCCc
Confidence 224468888876653
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.3e-06 Score=80.70 Aligned_cols=136 Identities=18% Similarity=0.177 Sum_probs=89.3
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++ ++.+.+++|++||..+.++.. . ...|+.+|...|.++..+
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------------~----~~~Y~~sK~a~~~~~~~l 167 (252)
T PRK06138 104 DWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR------------G----RAAYVASKGAIASLTRAM 167 (252)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC------------C----ccHHHHHHHHHHHHHHHH
Confidence 44566889999997776665 456788999999987544310 1 478999999999998887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-----HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
..+. ...+++++++||+.++++...+.. +..+.....+. .....+++++|++++++.++...
T Consensus 168 ~~~~----~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~d~a~~~~~l~~~~- 234 (252)
T PRK06138 168 ALDH----ATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFGTAEEVAQAALFLASDE- 234 (252)
T ss_pred HHHH----HhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCcCHHHHHHHHHHHcCch-
Confidence 5211 225899999999999988543211 11111111111 11124789999999999988631
Q ss_pred CCCCCCCCCCCCCCceEEEeCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 235 --------~~~~~g~~~~~~~g 248 (252)
T PRK06138 235 --------SSFATGTTLVVDGG 248 (252)
T ss_pred --------hcCccCCEEEECCC
Confidence 22345777766544
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.3e-06 Score=77.79 Aligned_cols=134 Identities=21% Similarity=0.180 Sum_probs=91.8
Q ss_pred cchhhhHhhhhHHHHHHHHHH-----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACL-----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~-----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+...++|+.++.++++++. +.+.+++|++||..++++. . +...|+.+|+..|.+++.
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~----~~~~y~~sK~a~~~~~~~ 173 (249)
T PRK12827 110 EWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN------------R----GQVNYAASKAGLIGLTKT 173 (249)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC------------C----CCchhHHHHHHHHHHHHH
Confidence 346678999999999999998 5677899999998754331 1 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...+++++++||+.++++......+. ..+....+ ...+.+.+|+++++..++...
T Consensus 174 l~~~~----~~~~i~~~~i~pg~v~t~~~~~~~~~--~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~----- 233 (249)
T PRK12827 174 LANEL----APRGITVNAVAPGAINTPMADNAAPT--EHLLNPVP---------VQRLGEPDEVAALVAFLVSDA----- 233 (249)
T ss_pred HHHHh----hhhCcEEEEEEECCcCCCcccccchH--HHHHhhCC---------CcCCcCHHHHHHHHHHHcCcc-----
Confidence 65311 22589999999999999855432211 11211111 112457899999988877521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 234 ----~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 234 ----ASYVTGQVIPVDGGF 248 (249)
T ss_pred ----cCCccCcEEEeCCCC
Confidence 234568888887653
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=75.05 Aligned_cols=139 Identities=16% Similarity=0.095 Sum_probs=94.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc-----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF-----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~-----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+. +.+++|++||...+++..+. ..+ ...|+.+|+..|.+++.
T Consensus 112 ~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~--------~~~----~~~Y~~sKa~~~~~~~~ 179 (259)
T PRK08213 112 AWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE--------VMD----TIAYNTSKGAVINFTRA 179 (259)
T ss_pred HHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc--------ccC----cchHHHHHHHHHHHHHH
Confidence 34567889999999999998765 67799999998754432110 011 47899999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...++++.+++|+.+-.+......+.+.+.+..+.+... +...+|++.+...++..
T Consensus 180 ~a~~~----~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~va~~~~~l~~~------ 240 (259)
T PRK08213 180 LAAEW----GPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGR---------LGDDEDLKGAALLLASD------ 240 (259)
T ss_pred HHHHh----cccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCc------
Confidence 75321 235899999999988766444445555555444332222 34578998888777642
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+++.++
T Consensus 241 ---~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 241 ---ASKHITGQILAVDGG 255 (259)
T ss_pred ---cccCccCCEEEECCC
Confidence 033457888877665
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.3e-05 Score=76.67 Aligned_cols=140 Identities=11% Similarity=0.117 Sum_probs=96.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++... .-.++|++||..+ |.+.+ ....|+.||...|.+++.+.
T Consensus 157 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~-~~~~~---------------~~~~Y~asK~a~~~~~~~la 220 (300)
T PRK06128 157 EQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS-YQPSP---------------TLLDYASTKAAIVAFTKALA 220 (300)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc-cCCCC---------------CchhHHHHHHHHHHHHHHHH
Confidence 456788999999999999999864 2248999999874 43211 13679999999999988775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|.++.... .....+..+.... ....+.+.+|++.++..++..
T Consensus 221 ~el----~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dva~~~~~l~s~------ 281 (300)
T PRK06128 221 KQV----AEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSET---------PMKRPGQPVEMAPLYVLLASQ------ 281 (300)
T ss_pred HHh----hhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCC---------CCCCCcCHHHHHHHHHHHhCc------
Confidence 311 2368999999999999885321 1222332222221 122367899999999887651
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
......|+.|++.+|..++
T Consensus 282 ---~~~~~~G~~~~v~gg~~~~ 300 (300)
T PRK06128 282 ---ESSYVTGEVFGVTGGLLLS 300 (300)
T ss_pred ---cccCccCcEEeeCCCEeCc
Confidence 0234568999998886543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=9.3e-06 Score=75.26 Aligned_cols=134 Identities=21% Similarity=0.230 Sum_probs=89.0
Q ss_pred chhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+...++|+.++.++++++.+. +.+++|++||..+ +.+ ..+ ...|+.||+..|.++..+...
T Consensus 114 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~~~~~ 177 (254)
T PRK12746 114 FDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV-RLG-----------FTG----SIAYGLSKGALNTMTLPLAKH 177 (254)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh-cCC-----------CCC----CcchHhhHHHHHHHHHHHHHH
Confidence 3566789999999999999863 3458999999874 321 111 468999999999987766421
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
. ...++++++++|+.++++-..... +.+........ ....+++++|+++++..++..
T Consensus 178 ~----~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~-------- 236 (254)
T PRK12746 178 L----GERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSS---------VFGRIGQVEDIADAVAFLASS-------- 236 (254)
T ss_pred H----hhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcC---------CcCCCCCHHHHHHHHHHHcCc--------
Confidence 1 235799999999999887432211 11111111111 113467899999999887651
Q ss_pred CCCCCCCCceEEEeCC
Q 016468 165 KGRPIASGQPYFVSDG 180 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~ 180 (389)
......|+.|++.++
T Consensus 237 -~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 237 -DSRWVTGQIIDVSGG 251 (254)
T ss_pred -ccCCcCCCEEEeCCC
Confidence 022346889999766
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.4e-06 Score=77.72 Aligned_cols=121 Identities=15% Similarity=0.047 Sum_probs=79.5
Q ss_pred chhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+..+++|+.|+.++++++. +.+.+++|++||..+..+. .+ ...|+.||+..|.++..+.
T Consensus 102 ~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~~la 165 (277)
T PRK06180 102 MRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM------------PG----IGYYCGSKFALEGISESLA 165 (277)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC------------CC----cchhHHHHHHHHHHHHHHH
Confidence 45668999999999999964 4566799999998753210 11 5789999999999887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC-------CHHHH---HHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER-------HLPRI---VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-------~~~~l---i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
... +..|++++++||+.+.++.... ..+.. +....... ... ....+..++|++++++.++
T Consensus 166 ~e~----~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~dva~~~~~~l 235 (277)
T PRK06180 166 KEV----APFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---EAK---SGKQPGDPAKAAQAILAAV 235 (277)
T ss_pred HHh----hhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---Hhh---ccCCCCCHHHHHHHHHHHH
Confidence 210 2258999999999997763221 11111 11111100 001 1123567999999999998
Q ss_pred h
Q 016468 155 M 155 (389)
Q Consensus 155 ~ 155 (389)
+
T Consensus 236 ~ 236 (277)
T PRK06180 236 E 236 (277)
T ss_pred c
Confidence 6
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.3e-06 Score=75.89 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=87.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC-------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG-------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g-------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
+.+..+++|+.++.++++++...- -.++|++||..++++. |. . ...|+.+|...|.++
T Consensus 103 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~----------~~-~----~~~Y~~sK~~~~~~~ 167 (247)
T PRK09730 103 RINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA----------PG-E----YVDYAASKGAIDTLT 167 (247)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC----------CC-c----ccchHhHHHHHHHHH
Confidence 345789999999998888776542 2469999998754432 10 0 246999999999888
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..+.... .+.+++++++||+.+|||.... ..+..........+.. -..+.+|++++++.++...
T Consensus 168 ~~l~~~~----~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~dva~~~~~~~~~~-- 232 (247)
T PRK09730 168 TGLSLEV----AAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ---------RGGQPEEVAQAIVWLLSDK-- 232 (247)
T ss_pred HHHHHHH----HHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHhhcChh--
Confidence 7654210 1257999999999999985432 2233333333322111 1236899999998887520
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.|.+.++
T Consensus 233 -------~~~~~g~~~~~~g~ 246 (247)
T PRK09730 233 -------ASYVTGSFIDLAGG 246 (247)
T ss_pred -------hcCccCcEEecCCC
Confidence 22356777776654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.9e-06 Score=75.48 Aligned_cols=135 Identities=13% Similarity=0.082 Sum_probs=90.6
Q ss_pred hhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 10 GRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+..+++|+.++.++++++.+ .+.+++|++||..+..+ ..+ ...|+.||+..|.+++.+..
T Consensus 107 ~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~----~~~y~~sK~a~~~~~~~~~~ 170 (250)
T PRK08063 107 DWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY------------LEN----YTTVGVSKAALEALTRYLAV 170 (250)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC------------CCC----ccHHHHHHHHHHHHHHHHHH
Confidence 44678999999999999875 35569999999764211 111 46899999999999987642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
+. ...++++.+++|+.+..+..... ...+........+ ...+++.+|++++++.++...
T Consensus 171 ~~----~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~~~~~~------ 231 (250)
T PRK08063 171 EL----APKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP---------AGRMVEPEDVANAVLFLCSPE------ 231 (250)
T ss_pred HH----hHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHcCch------
Confidence 11 23589999999999987643211 1222222221111 123689999999999887520
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 232 ---~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 232 ---ADMIRGQTIIVDGGRS 247 (250)
T ss_pred ---hcCccCCEEEECCCee
Confidence 2234688888877654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.3e-05 Score=74.07 Aligned_cols=139 Identities=14% Similarity=0.046 Sum_probs=90.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+.+.. .+.+++|++||..+ +.+ ..+ ...|+.+|...+.++..
T Consensus 104 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~-----------~~~----~~~y~~sk~~~~~~~~~ 167 (251)
T PRK07231 104 AEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAG-LRP-----------RPG----LGWYNASKGAVITLTKA 167 (251)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh-cCC-----------CCC----chHHHHHHHHHHHHHHH
Confidence 34567889999987777776654 67789999999875 321 111 46899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHH----HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~----~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+..+. ...++++++++|+.+..+....... ........+ .....+++++|++++++.++...
T Consensus 168 ~a~~~----~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~- 233 (251)
T PRK07231 168 LAAEL----GPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT---------IPLGRLGTPEDIANAALFLASDE- 233 (251)
T ss_pred HHHHh----hhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC---------CCCCCCcCHHHHHHHHHHHhCcc-
Confidence 65321 2248999999999996653222111 111111111 12235789999999999988521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+.+.+|..+
T Consensus 234 --------~~~~~g~~~~~~gg~~~ 250 (251)
T PRK07231 234 --------ASWITGVTLVVDGGRCV 250 (251)
T ss_pred --------ccCCCCCeEEECCCccC
Confidence 22345777777666443
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.6e-06 Score=76.91 Aligned_cols=137 Identities=16% Similarity=0.114 Sum_probs=91.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.++.++++++.+. .-+++|++||.....+ ..+ ...|+.+|...|.+++.+
T Consensus 105 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~------------~~~----~~~Y~~sK~a~~~l~~~~ 168 (258)
T PRK07890 105 AHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS------------QPK----YGAYKMAKGALLAASQSL 168 (258)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC------------CCC----cchhHHHHHHHHHHHHHH
Confidence 456778999999999999999763 2258999999764211 111 468999999999998877
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-----------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.... ...+++++++||+.|+||...... +.+....... .....+.+++|++++++.
T Consensus 169 a~~~----~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~a~~~ 235 (258)
T PRK07890 169 ATEL----GPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------SDLKRLPTDDEVASAVLF 235 (258)
T ss_pred HHHH----hhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc---------CCccccCCHHHHHHHHHH
Confidence 5311 225799999999999998543211 1111111111 112246789999999988
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
++... .....|+.+.+.+|.
T Consensus 236 l~~~~---------~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 236 LASDL---------ARAITGQTLDVNCGE 255 (258)
T ss_pred HcCHh---------hhCccCcEEEeCCcc
Confidence 87521 224567777666554
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=74.68 Aligned_cols=137 Identities=18% Similarity=0.193 Sum_probs=91.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++... +..++|++||.....+. .. ...|+.+|+..|.+++..
T Consensus 107 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~y~~sK~~~~~~~~~l 170 (250)
T PRK12939 107 TWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA------------PK----LGAYVASKGAVIGMTRSL 170 (250)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC------------CC----cchHHHHHHHHHHHHHHH
Confidence 34566789999999999998653 34599999997642211 11 367999999999999876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..+. ...++++++++|+.+..+....... ........+ .....+++++|++++++.++...
T Consensus 171 ~~~~----~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~----- 232 (250)
T PRK12939 171 AREL----GGRGITVNAIAPGLTATEATAYVPADERHAYYLKG---------RALERLQVPDDVAGAVLFLLSDA----- 232 (250)
T ss_pred HHHH----hhhCEEEEEEEECCCCCccccccCChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHhCcc-----
Confidence 4321 2357999999999887664321111 222222222 12235789999999999998621
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|.-
T Consensus 233 ----~~~~~G~~i~~~gg~~ 248 (250)
T PRK12939 233 ----ARFVTGQLLPVNGGFV 248 (250)
T ss_pred ----ccCccCcEEEECCCcc
Confidence 2245788888877643
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.1e-05 Score=72.55 Aligned_cols=135 Identities=20% Similarity=0.195 Sum_probs=89.9
Q ss_pred chhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+..+++|+.++.++++++. +.+.+++|++||..+ +.+.+ ....|+.+|+..|.++..+.
T Consensus 104 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~-~~~~~---------------~~~~Y~~sK~a~~~~~~~la 167 (250)
T TIGR03206 104 WERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAA-RVGSS---------------GEAVYAACKGGLVAFSKTMA 167 (250)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhh-ccCCC---------------CCchHHHHHHHHHHHHHHHH
Confidence 45678999999999988886 456789999999875 33211 13679999999888888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC-----HH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH-----LP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-----~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
... ...+++++++||+.++++..... -+ .+...+....+. ..+...+|+++++..++..
T Consensus 168 ~~~----~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~-- 232 (250)
T TIGR03206 168 REH----ARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRLGQPDDLPGAILFFSSD-- 232 (250)
T ss_pred HHH----hHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCCcCHHHHHHHHHHHcCc--
Confidence 321 22479999999999988732210 11 122222222211 1245679999999988751
Q ss_pred CCCCCCCCCCCCCCceEEEeCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+ .....|+.+.+.+|.
T Consensus 233 -~------~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 233 -D------ASFITGQVLSVSGGL 248 (250)
T ss_pred -c------cCCCcCcEEEeCCCc
Confidence 1 334568899887663
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=2.3e-05 Score=72.26 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=89.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+++..+++|+.++.++++++... ...++|++||....||.. . ...|+.+|+..|.++..+.
T Consensus 102 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~----~~~Y~~sK~a~~~~~~~la 165 (249)
T PRK06500 102 AMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------N----SSVYAASKAALLSLAKTLS 165 (249)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------C----ccHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999852 235788888866555421 1 4789999999999997664
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
... ...|++++++||+.+++|... .....+.+.+..+.+.. -+...+|+++++..++...
T Consensus 166 ~e~----~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~~~- 231 (249)
T PRK06500 166 GEL----LPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFGTPEEIAKAVLYLASDE- 231 (249)
T ss_pred HHh----hhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHcCcc-
Confidence 211 235899999999999987321 12233333333332211 1357899999999887510
Q ss_pred CCCCCCCCCCCCCCceEEEeCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
..-..|+.+.+.+|
T Consensus 232 --------~~~~~g~~i~~~gg 245 (249)
T PRK06500 232 --------SAFIVGSEIIVDGG 245 (249)
T ss_pred --------ccCccCCeEEECCC
Confidence 22345666655554
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.2e-05 Score=74.18 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=92.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc-----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF-----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~-----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+.++++|+.++.++.+++... +-.++|++||.. .|+.. + ...|+.||+..|.+++.
T Consensus 114 ~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~------------~----~~~Y~~sK~a~~~l~~~ 176 (253)
T PRK08217 114 QFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNM------------G----QTNYSASKAGVAAMTVT 176 (253)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCC------------C----CchhHHHHHHHHHHHHH
Confidence 44567789999998887766532 224699999876 45421 1 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...++++++++|+.+.++......+........+.+. ..+.+.+|+++++..++.
T Consensus 177 la~~~----~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~------- 236 (253)
T PRK08217 177 WAKEL----ARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPV---------GRLGEPEEIAHTVRFIIE------- 236 (253)
T ss_pred HHHHH----HHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCc---------CCCcCHHHHHHHHHHHHc-------
Confidence 75210 2258999999999998876554445544444333221 235689999999998885
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|++|++.++-
T Consensus 237 ----~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 237 ----NDYVTGRVLEIDGGL 251 (253)
T ss_pred ----CCCcCCcEEEeCCCc
Confidence 334578999988764
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.1e-05 Score=72.12 Aligned_cols=136 Identities=15% Similarity=0.104 Sum_probs=90.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++... +-+++|++||... +.. . | ....|+.||+..|.+.+.+
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~-~~~---------~---p---~~~~Y~~sK~a~~~~~~~l 173 (258)
T PRK09134 110 SWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV-WNL---------N---P---DFLSYTLSKAALWTATRTL 173 (258)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh-cCC---------C---C---CchHHHHHHHHHHHHHHHH
Confidence 45678899999999999998764 2357888887542 211 1 1 1357999999999998887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... . .++++++++|+.++..... ....+.....+.. .+ ...+++|+|++++.+++
T Consensus 174 a~~~----~-~~i~v~~i~PG~v~t~~~~--~~~~~~~~~~~~~---~~------~~~~~~d~a~~~~~~~~-------- 229 (258)
T PRK09134 174 AQAL----A-PRIRVNAIGPGPTLPSGRQ--SPEDFARQHAATP---LG------RGSTPEEIAAAVRYLLD-------- 229 (258)
T ss_pred HHHh----c-CCcEEEEeecccccCCccc--ChHHHHHHHhcCC---CC------CCcCHHHHHHHHHHHhc--------
Confidence 5311 1 2489999999988764322 1222222222211 11 23679999999999997
Q ss_pred CCCCCCCCCceEEEeCCCCCChH
Q 016468 164 QKGRPIASGQPYFVSDGFPINTF 186 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s~~ 186 (389)
.+...|+.|++.+|..+++.
T Consensus 230 ---~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 230 ---APSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred ---CCCcCCCEEEECCCeecccc
Confidence 44567889999888755543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=1e-05 Score=75.04 Aligned_cols=141 Identities=16% Similarity=0.099 Sum_probs=88.3
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++. +.+.+++|++||..++++... ...++.+..+ ...|+.||...|.+.+..
T Consensus 109 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--~~~~~~~~~~----~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK09186 109 DFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF--EIYEGTSMTS----PVEYAAIKAGIIHLTKYL 182 (256)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc--hhccccccCC----cchhHHHHHHHHHHHHHH
Confidence 345677889888776666554 457789999999765433211 1122222221 357999999999888755
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...++++++++|+.++++... .+........ ....+++++|+++++..++...
T Consensus 183 a~e~----~~~~i~v~~i~Pg~~~~~~~~----~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~------ 239 (256)
T PRK09186 183 AKYF----KDSNIRVNCVSPGGILDNQPE----AFLNAYKKCC---------NGKGMLDPDDICGTLVFLLSDQ------ 239 (256)
T ss_pred HHHh----CcCCeEEEEEecccccCCCCH----HHHHHHHhcC---------CccCCCCHHHhhhhHhheeccc------
Confidence 4211 236899999999988865321 2222222111 0124789999999999988521
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 240 ---~~~~~g~~~~~~~g 253 (256)
T PRK09186 240 ---SKYITGQNIIVDDG 253 (256)
T ss_pred ---cccccCceEEecCC
Confidence 22345777777665
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.8e-05 Score=71.40 Aligned_cols=139 Identities=15% Similarity=0.166 Sum_probs=92.2
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+...++|+.++.++.+++ ++.+.+++|++||... +.+. + . ...|+.+|+..|.+++.
T Consensus 102 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~-~~~~---------~--~----~~~Y~~sK~a~~~~~~~ 165 (245)
T PRK12824 102 QEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNG-LKGQ---------F--G----QTNYSAAKAGMIGFTKA 165 (245)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhh-ccCC---------C--C----ChHHHHHHHHHHHHHHH
Confidence 345567889999999885554 5567789999999764 3211 1 1 36899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+... + ...++++.+++|+.+.++.....-+..........+ ...+...+|+++++..++..
T Consensus 166 l~~~-~---~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~------ 226 (245)
T PRK12824 166 LASE-G---ARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIP---------MKRLGTPEEIAAAVAFLVSE------ 226 (245)
T ss_pred HHHH-H---HHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCc------
Confidence 6421 1 235799999999999877543332333333332221 12345689999999877641
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
......|+.+++.+|..+
T Consensus 227 ---~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 227 ---AAGFITGETISINGGLYM 244 (245)
T ss_pred ---cccCccCcEEEECCCeec
Confidence 023457899999888653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=1.3e-05 Score=76.40 Aligned_cols=137 Identities=17% Similarity=0.129 Sum_probs=93.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+....+++|+.++.++++++.+. ...++|++||..+ |.+. +. ...|+.||+..+.+++.+..
T Consensus 148 ~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~-~~~~---------~~------~~~Y~~sK~a~~~l~~~la~ 211 (290)
T PRK06701 148 QLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG-YEGN---------ET------LIDYSATKGAIHAFTRSLAQ 211 (290)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc-cCCC---------CC------cchhHHHHHHHHHHHHHHHH
Confidence 34668899999999999999763 2358999999874 4321 11 35799999999998888763
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.. ...|+++++++|+.|+.+..... .+..+..... ......+.+++|++++++.++...
T Consensus 212 ~~----~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll~~~------- 271 (290)
T PRK06701 212 SL----VQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLASPD------- 271 (290)
T ss_pred Hh----hhcCeEEEEEecCCCCCcccccccCHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHcCcc-------
Confidence 21 22589999999999988743211 1222222211 112245789999999999887621
Q ss_pred CCCCCCCCceEEEeCCCC
Q 016468 165 KGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.++..
T Consensus 272 --~~~~~G~~i~idgg~~ 287 (290)
T PRK06701 272 --SSYITGQMLHVNGGVI 287 (290)
T ss_pred --cCCccCcEEEeCCCcc
Confidence 2345688888877643
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.6e-05 Score=72.11 Aligned_cols=138 Identities=16% Similarity=0.112 Sum_probs=92.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.. .+..++|++||....+ +..+ ...|+.||+..|.++..
T Consensus 98 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~------------~~~~----~~~Y~~sK~a~~~~~~~ 161 (252)
T PRK08220 98 EDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV------------PRIG----MAAYGASKAALTSLAKC 161 (252)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc------------CCCC----CchhHHHHHHHHHHHHH
Confidence 35667899999999999999864 4556899999976411 1111 47899999999999877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHH--H--------HHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP--R--------IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~--~--------li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
+.... ...++++++++|+.|+++....... . .......+ .....+++++|++++++.
T Consensus 162 la~e~----~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~ 228 (252)
T PRK08220 162 VGLEL----APYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG---------IPLGKIARPQEIANAVLF 228 (252)
T ss_pred HHHHh----hHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc---------CCCcccCCHHHHHHHHHH
Confidence 65211 2367999999999999885332110 0 01111111 122458999999999998
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
++... .....|+.+.+.+|..
T Consensus 229 l~~~~---------~~~~~g~~i~~~gg~~ 249 (252)
T PRK08220 229 LASDL---------ASHITLQDIVVDGGAT 249 (252)
T ss_pred Hhcch---------hcCccCcEEEECCCee
Confidence 87521 2345677776666643
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.1e-05 Score=69.83 Aligned_cols=135 Identities=14% Similarity=0.064 Sum_probs=91.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+.+.++|+.++.++.++....+.+++|++||..+ +.+ ..+ ...|+.||...|.+.+.....
T Consensus 91 ~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~la~e 154 (230)
T PRK07041 91 AAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAA-VRP-----------SAS----GVLQGAINAALEALARGLALE 154 (230)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhh-cCC-----------CCc----chHHHHHHHHHHHHHHHHHHH
Confidence 3567788999999999999777667789999999874 321 111 468999999999998886531
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC----CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER----HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~----~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
-.++++++++|+.+-.+.... ....++.......+. ..+...+|+++++..+++
T Consensus 155 ------~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~------- 212 (230)
T PRK07041 155 ------LAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAA------- 212 (230)
T ss_pred ------hhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhc-------
Confidence 124889999998775432110 011222222222211 123467999999999886
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.|++.+|.++
T Consensus 213 ----~~~~~G~~~~v~gg~~~ 229 (230)
T PRK07041 213 ----NGFTTGSTVLVDGGHAI 229 (230)
T ss_pred ----CCCcCCcEEEeCCCeec
Confidence 34467899998887654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=3.7e-05 Score=71.26 Aligned_cols=137 Identities=12% Similarity=0.150 Sum_probs=92.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.. .+.+++|++||...+++.. ....|+.||...|.+.+..
T Consensus 112 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------~~~~Y~~sK~a~~~~~~~l 175 (255)
T PRK06841 112 DWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE----------------RHVAYCASKAGVVGMTKVL 175 (255)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC----------------CCchHHHHHHHHHHHHHHH
Confidence 4566889999999999999875 3567999999987543310 1368999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.... ...|+++..++|+.|-.+....... ........+. ....+.+.+|++++++.++...
T Consensus 176 a~e~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~----- 237 (255)
T PRK06841 176 ALEW----GPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLI---------PAGRFAYPEEIAAAALFLASDA----- 237 (255)
T ss_pred HHHH----HhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcc-----
Confidence 5321 2258999999999987664322111 1111111111 1234789999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 238 ----~~~~~G~~i~~dgg~~ 253 (255)
T PRK06841 238 ----AAMITGENLVIDGGYT 253 (255)
T ss_pred ----ccCccCCEEEECCCcc
Confidence 3345788888876653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=6.6e-05 Score=69.37 Aligned_cols=136 Identities=15% Similarity=0.161 Sum_probs=91.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.+++++|.. .+..++|++||... . .+..| .+.|+.||+..|.+++.+
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~-~-----------~~~~~----~~~Y~~sK~a~~~l~~~l 173 (253)
T PRK08642 110 DFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF-Q-----------NPVVP----YHDYTTAKAALLGLTRNL 173 (253)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc-c-----------CCCCC----ccchHHHHHHHHHHHHHH
Confidence 3456799999999999999963 45678999998642 1 12222 478999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.... ...++++..++|+.+--+...... +..........+ ...+.+.+|+++++..++...
T Consensus 174 a~~~----~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~----- 235 (253)
T PRK08642 174 AAEL----GPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTP---------LRKVTTPQEFADAVLFFASPW----- 235 (253)
T ss_pred HHHh----CccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCch-----
Confidence 5421 236899999999988654222111 222222222111 124788999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 236 ----~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 236 ----ARAVTGQNLVVDGGL 250 (253)
T ss_pred ----hcCccCCEEEeCCCe
Confidence 345678888777664
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.3e-05 Score=73.94 Aligned_cols=148 Identities=18% Similarity=0.209 Sum_probs=93.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++... +-.++|++||...+++.. ....|+.||+..|.+++.
T Consensus 118 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------------~~~~Y~~sK~a~~~~~~~ 181 (280)
T PLN02253 118 SEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL----------------GPHAYTGSKHAVLGLTRS 181 (280)
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC----------------CCcccHHHHHHHHHHHHH
Confidence 345778999999999999988753 345799999877544321 035799999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+..+. ...++++.+++|+.|..+...... ...+..... ............++.+|+++++..++..
T Consensus 182 la~e~----~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~dva~~~~~l~s~ 253 (280)
T PLN02253 182 VAAEL----GKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA----FAGKNANLKGVELTVDDVANAVLFLASD 253 (280)
T ss_pred HHHHh----hhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH----HhhcCCCCcCCCCCHHHHHHHHHhhcCc
Confidence 75321 235899999999999776321100 111111100 0000000012247899999999988751
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCChHH
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
......|+.+++.+|...+..+
T Consensus 254 ---------~~~~i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 254 ---------EARYISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred ---------ccccccCcEEEECCchhhccch
Confidence 1334568889888776544433
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.00 E-value=5e-06 Score=59.89 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=26.0
Q ss_pred ccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 251 YFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 251 ~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+.|++|++++|||+|+++++++++++.+|++++..
T Consensus 26 ~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np~ 60 (62)
T PF13950_consen 26 VADISKAREELGWKPKYSLEDMIRDAWNWQKKNPN 60 (62)
T ss_dssp -B--HHHHHHC----SSSHHHHHHHHHHHHHHSTT
T ss_pred hCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCcC
Confidence 78999999999999999999999999999988654
|
... |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.97 E-value=3e-05 Score=72.90 Aligned_cols=127 Identities=13% Similarity=-0.014 Sum_probs=78.2
Q ss_pred cchhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.+ ++++++.+++.+.+++|++||..... ..| ....|+.||+..+.+....
T Consensus 97 ~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------~~~------~~~~Y~~sKaa~~~~~~~l 160 (273)
T PRK06182 97 EARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------YTP------LGAWYHATKFALEGFSDAL 160 (273)
T ss_pred HHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----------CCC------CccHhHHHHHHHHHHHHHH
Confidence 457788999988 45566667777888999999976311 111 1357999999999887654
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCc--------ceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP--------FKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~--------~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... + ...|+++.++||+.|..+........+.... .+... ..+........+.+.+|+|++++.++.
T Consensus 161 ~~e-~---~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~ 235 (273)
T PRK06182 161 RLE-V---APFGIDVVVIEPGGIKTEWGDIAADHLLKTS-GNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVT 235 (273)
T ss_pred HHH-h---cccCCEEEEEecCCcccccchhhhhhhcccc-cccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHh
Confidence 311 0 2368999999999998774321100000000 00000 000111122356799999999999986
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=5e-05 Score=70.67 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=90.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++++++.... -+++|++||.... .+..+ ...|+.+|...+.++.
T Consensus 102 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~------------~~~~~----~~~Y~~sK~a~~~l~~ 165 (256)
T PRK12743 102 DEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH------------TPLPG----ASAYTAAKHALGGLTK 165 (256)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc------------CCCCC----cchhHHHHHHHHHHHH
Confidence 3556788999999999999887642 2489999996531 11122 4789999999999887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...++++.+++|+.++++.....-.........+.+. ..+.+.+|+++++..++...
T Consensus 166 ~la~~~----~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~---- 228 (256)
T PRK12743 166 AMALEL----VEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPL---------GRPGDTHEIASLVAWLCSEG---- 228 (256)
T ss_pred HHHHHh----hhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCcc----
Confidence 765321 2357999999999999874332111211111111111 12457899999998877511
Q ss_pred CCCCCCCCCCCceEEEeCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 229 -----~~~~~G~~~~~dgg~~ 244 (256)
T PRK12743 229 -----ASYTTGQSLIVDGGFM 244 (256)
T ss_pred -----ccCcCCcEEEECCCcc
Confidence 2345688888877654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00011 Score=67.58 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=89.1
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.+.++|+.++.++.+++ ++.+.+++|++||....++. . ....|+.+|...|.+...
T Consensus 103 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~----~~~~y~~sK~a~~~~~~~ 166 (246)
T PRK12938 103 EDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ------------F----GQTNYSTAKAGIHGFTMS 166 (246)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC------------C----CChhHHHHHHHHHHHHHH
Confidence 345778899999966655554 45677899999997642211 1 147899999988887766
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...++++.+++|+.+.+|......+..+..+....+ ...+...+|+++++..++..
T Consensus 167 l~~~~----~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~l~~~------ 227 (246)
T PRK12938 167 LAQEV----ATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIP---------VRRLGSPDEIGSIVAWLASE------ 227 (246)
T ss_pred HHHHh----hhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCC---------ccCCcCHHHHHHHHHHHcCc------
Confidence 54211 236899999999999877543323444443332221 12345689999999887641
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.++.
T Consensus 228 ---~~~~~~g~~~~~~~g~ 243 (246)
T PRK12938 228 ---ESGFSTGADFSLNGGL 243 (246)
T ss_pred ---ccCCccCcEEEECCcc
Confidence 0334578888876653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0001 Score=68.41 Aligned_cols=136 Identities=17% Similarity=0.163 Sum_probs=88.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++++++... .-.++|++||....++. + ....|+.||+..|.+++.+.
T Consensus 109 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~----------~------~~~~Y~~sKaa~~~~~~~la 172 (255)
T PRK05717 109 HWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE----------P------DTEAYAASKGGLLALTHALA 172 (255)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC----------C------CCcchHHHHHHHHHHHHHHH
Confidence 45678899999999999999742 23589999998753321 0 14689999999999988775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.+. ..++++.+++|+.|.++........-........ . ....+.+.+|++.++..++...
T Consensus 173 ~~~-----~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~va~~~~~l~~~~------- 232 (255)
T PRK05717 173 ISL-----GPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQ-H-------PAGRVGTVEDVAAMVAWLLSRQ------- 232 (255)
T ss_pred HHh-----cCCCEEEEEecccCcCCccccccchHHHHHHhhc-C-------CCCCCcCHHHHHHHHHHHcCch-------
Confidence 321 1358999999999998753321111111111111 0 0123678999999998777511
Q ss_pred CCCCCCCCceEEEeCCC
Q 016468 165 KGRPIASGQPYFVSDGF 181 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.++.
T Consensus 233 --~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 233 --AGFVTGQEFVVDGGM 247 (255)
T ss_pred --hcCccCcEEEECCCc
Confidence 223457777775553
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=5.6e-05 Score=70.34 Aligned_cols=143 Identities=13% Similarity=0.064 Sum_probs=90.7
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++. +.+..++|++||... +.+ .. .....|+.||+..|.+++.+
T Consensus 102 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~-~~~-----------~~---~~~~~Y~~sK~a~~~l~~~~ 166 (260)
T PRK06523 102 EWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQR-RLP-----------LP---ESTTAYAAAKAALSTYSKSL 166 (260)
T ss_pred HHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccc-cCC-----------CC---CCcchhHHHHHHHHHHHHHH
Confidence 466778899999988766654 456678999999764 211 00 11478999999999988877
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHH-----------HHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRI-----------VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~l-----------i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.... ...|+++.+++|+.|..+.......++ ...+.+... + .....+...+|+++++..
T Consensus 167 a~~~----~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~p~~~~~~~~~va~~~~~ 236 (260)
T PRK06523 167 SKEV----APKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLG----G--IPLGRPAEPEEVAELIAF 236 (260)
T ss_pred HHHH----hhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhc----c--CccCCCCCHHHHHHHHHH
Confidence 5321 235899999999999887532211111 111110000 0 001124578999999988
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
++.. ......|+.+.+.+|...|
T Consensus 237 l~s~---------~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 237 LASD---------RAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HhCc---------ccccccCceEEecCCccCC
Confidence 8751 0335678889888876554
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00012 Score=69.80 Aligned_cols=137 Identities=11% Similarity=0.069 Sum_probs=91.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++... .-.++|++||..+ +.+. + ....|+.||+..+.++....
T Consensus 151 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~-~~~~---------~------~~~~Y~asKaal~~l~~~la 214 (294)
T PRK07985 151 EQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA-YQPS---------P------HLLDYAATKAAILNYSRGLA 214 (294)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh-ccCC---------C------CcchhHHHHHHHHHHHHHHH
Confidence 456778999999999999999763 2258999999874 3211 1 13689999999998888775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|+++.... .-...........+ ...+...+|++.++..++..
T Consensus 215 ~el----~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~r~~~pedva~~~~fL~s~------ 275 (294)
T PRK07985 215 KQV----AEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP---------MKRAGQPAELAPVYVYLASQ------ 275 (294)
T ss_pred HHH----hHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC---------CCCCCCHHHHHHHHHhhhCh------
Confidence 311 2258999999999999884321 11122222222111 11356789999999988751
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 276 ---~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 276 ---ESSYVTAEVHGVCGGE 291 (294)
T ss_pred ---hcCCccccEEeeCCCe
Confidence 1334568888877664
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=3e-05 Score=72.08 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=92.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHH---cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLE---FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~---~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++.+++.. .+.+++|++||..++++. . ....|+.||+..|.++....
T Consensus 105 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~----~~~~Y~~sK~a~~~~~~~l~ 168 (258)
T PRK08628 105 AFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ------------G----GTSGYAAAKGAQLALTREWA 168 (258)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC------------C----CCchhHHHHHHHHHHHHHHH
Confidence 4566788999999999998864 234689999998754321 1 14789999999999999874
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHH------HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP------RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~------~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.. ..+.++++..++|+.|+++.....+. .....+.... + .+ ..++..+|++++++.++...
T Consensus 169 ~e----~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~---~~---~~~~~~~dva~~~~~l~~~~- 235 (258)
T PRK08628 169 VA----LAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKI--P---LG---HRMTTAEEIADTAVFLLSER- 235 (258)
T ss_pred HH----HhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcC--C---cc---ccCCCHHHHHHHHHHHhChh-
Confidence 21 12368999999999999874321110 0111111111 0 01 13678899999999988621
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHH
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
.....|+.+.+.++. ..++|
T Consensus 236 --------~~~~~g~~~~~~gg~-~~~~~ 255 (258)
T PRK08628 236 --------SSHTTGQWLFVDGGY-VHLDR 255 (258)
T ss_pred --------hccccCceEEecCCc-ccccc
Confidence 334568888775553 44433
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.3e-05 Score=67.93 Aligned_cols=136 Identities=15% Similarity=0.079 Sum_probs=86.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.+ .+.+++|++||...+++.. . ...|+.+|...+.+++..
T Consensus 103 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------~------~~~Y~~sk~a~~~~~~~l 166 (245)
T PRK12936 103 DWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP----------G------QANYCASKAGMIGFSKSL 166 (245)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC----------C------CcchHHHHHHHHHHHHHH
Confidence 5577889999999999888753 4667999999987544321 0 357999999888777665
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...++++++++|+.+..+.....-+..-.... +. . ....+.+.+|+++++..++...
T Consensus 167 a~~~----~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~-~~-~-------~~~~~~~~~~ia~~~~~l~~~~------ 227 (245)
T PRK12936 167 AQEI----ATRNVTVNCVAPGFIESAMTGKLNDKQKEAIM-GA-I-------PMKRMGTGAEVASAVAYLASSE------ 227 (245)
T ss_pred HHHh----hHhCeEEEEEEECcCcCchhcccChHHHHHHh-cC-C-------CCCCCcCHHHHHHHHHHHcCcc------
Confidence 3210 23579999999998765432211111111111 11 0 1123567999999998776410
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 228 ---~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 228 ---AAYVTGQTIHVNGGM 242 (245)
T ss_pred ---ccCcCCCEEEECCCc
Confidence 223468889887764
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.1e-05 Score=68.75 Aligned_cols=135 Identities=16% Similarity=0.076 Sum_probs=90.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.. .+.+++|++||...+++.. ....|+.+|...+.++...
T Consensus 106 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~----------------~~~~y~~sK~a~~~~~~~~ 169 (247)
T PRK05565 106 EWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS----------------CEVLYSASKGAVNAFTKAL 169 (247)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----------------CccHHHHHHHHHHHHHHHH
Confidence 4567889999999988888865 4567899999987544311 1357999999888877776
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...|++++++||+.+-.+......+.......... ....+...+|++++++.++...
T Consensus 170 ~~~~----~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~------ 230 (247)
T PRK05565 170 AKEL----APSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEI---------PLGRLGKPEEIAKVVLFLASDD------ 230 (247)
T ss_pred HHHH----HHcCeEEEEEEECCccCccccccChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCc------
Confidence 4321 23589999999999876544332222222221111 1123568899999999888631
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+++.++
T Consensus 231 ---~~~~~g~~~~~~~~ 244 (247)
T PRK05565 231 ---ASYITGQIITVDGG 244 (247)
T ss_pred ---cCCccCcEEEecCC
Confidence 34567888887765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=2.6e-05 Score=73.72 Aligned_cols=138 Identities=12% Similarity=0.058 Sum_probs=92.5
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCC------CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGI------QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gv------krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+.+..+++|+.|+.++.+++ .+.+. .++|++||..+.++. + + ...|+.||+..|
T Consensus 106 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------~--~----~~~Y~~sK~a~~ 169 (287)
T PRK06194 106 DWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP----------P--A----MGIYNVSKHAVV 169 (287)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----------C--C----CcchHHHHHHHH
Confidence 45567899999999987774 44443 589999998753321 1 1 468999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.++..+..... ....++++..+.|+.|..+ +.....+.+..+.+++.+.+++++++|.+.+....
T Consensus 170 ~~~~~l~~e~~--~~~~~irv~~v~pg~i~t~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 234 (287)
T PRK06194 170 SLTETLYQDLS--LVTDQVGASVLCPYFVPTG---------IWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGS---- 234 (287)
T ss_pred HHHHHHHHHHh--hcCCCeEEEEEEeCcccCc---------cccccccCchhcccCccccchhhHHHHHHHhhhhc----
Confidence 99987653110 0124577777777665432 11122234455667888999999999998765311
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYD 199 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~ 199 (389)
+ .++..|+++.+.+.++..
T Consensus 235 --------------~---------~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 235 --------------G---------KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred --------------c---------CCCHHHHHHHHHHHHHcC
Confidence 1 178999999999877543
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.6e-05 Score=70.03 Aligned_cols=120 Identities=17% Similarity=0.036 Sum_probs=78.1
Q ss_pred cchhhhHhhhhHHHHH----HHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHV----IEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nl----l~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.|+.++ ++++++.+.+++|++||...+.+ .+ ....|+.||...|.+...+
T Consensus 97 ~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------~~------~~~~Y~~sK~~~~~~~~~l 160 (256)
T PRK08017 97 QMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS----------TP------GRGAYAASKYALEAWSDAL 160 (256)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC----------CC------CccHHHHHHHHHHHHHHHH
Confidence 3457889999988775 67777788889999999653211 01 1478999999999887653
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCC-CcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... -.+.+++++++||+.+..+- ...+..+. .......+...+.+++++|+++++..+++
T Consensus 161 ~~~----~~~~~i~v~~v~pg~~~t~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~ 221 (256)
T PRK08017 161 RME----LRHSGIKVSLIEPGPIRTRF--------TDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALE 221 (256)
T ss_pred HHH----HhhcCCEEEEEeCCCcccch--------hhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHh
Confidence 210 02357999999997765321 11111111 11111223334568999999999999987
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0001 Score=68.63 Aligned_cols=119 Identities=18% Similarity=0.120 Sum_probs=80.6
Q ss_pred chhhhHhhhhHHHHHHHHHHH---cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 9 FGRVDEVNINGTCHVIEACLE---FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~---~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+...++|+.++.++++++.. .+.+++|++||..+ +.+ ..+ ...|+.||...|.+......
T Consensus 103 ~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~~~~~~~~~l~~ 166 (263)
T PRK06181 103 FERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAG-LTG-----------VPT----RSGYAASKHALHGFFDSLRI 166 (263)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccc-cCC-----------CCC----ccHHHHHHHHHHHHHHHHHH
Confidence 456689999999999999964 24578999999874 321 111 47899999999988876532
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.. .+.++++.+++|+.+..+..... .. ..+... ...+.+..++++++|+++++..+++
T Consensus 167 ~~----~~~~i~~~~i~pg~v~t~~~~~~----~~--~~~~~~--~~~~~~~~~~~~~~dva~~i~~~~~ 224 (263)
T PRK06181 167 EL----ADDGVAVTVVCPGFVATDIRKRA----LD--GDGKPL--GKSPMQESKIMSAEECAEAILPAIA 224 (263)
T ss_pred Hh----hhcCceEEEEecCccccCcchhh----cc--cccccc--ccccccccCCCCHHHHHHHHHHHhh
Confidence 10 23689999999999876533211 00 011111 1122223478999999999999986
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00014 Score=67.36 Aligned_cols=135 Identities=16% Similarity=0.136 Sum_probs=88.6
Q ss_pred chhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+..+++|+.++.++++++... +..++|++||... +.+ ... ...|+.||+..+.+++.+...
T Consensus 112 ~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sKaa~~~~~~~la~e 175 (252)
T PRK12747 112 FDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT-RIS-----------LPD----FIAYSMTKGAINTMTFTLAKQ 175 (252)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc-ccC-----------CCC----chhHHHHHHHHHHHHHHHHHH
Confidence 4677889999999999988764 2358999999874 211 111 468999999999998876432
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
. ...|+++.++.|+.|.++....... .......... .....+.+.+|+++++..++..
T Consensus 176 ~----~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~s~--------- 234 (252)
T PRK12747 176 L----GARGITVNAILPGFIKTDMNAELLSDPMMKQYATTI--------SAFNRLGEVEDIADTAAFLASP--------- 234 (252)
T ss_pred H----hHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhc--------CcccCCCCHHHHHHHHHHHcCc---------
Confidence 1 2368999999999998774321111 1111111100 0112467899999999887641
Q ss_pred CCCCCCCceEEEeCC
Q 016468 166 GRPIASGQPYFVSDG 180 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 235 ~~~~~~G~~i~vdgg 249 (252)
T PRK12747 235 DSRWVTGQLIDVSGG 249 (252)
T ss_pred cccCcCCcEEEecCC
Confidence 133456888877655
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00012 Score=66.44 Aligned_cols=111 Identities=15% Similarity=0.096 Sum_probs=71.8
Q ss_pred chhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+...++|+.+ ++++++++++. .+++|++||..+ +++.+ +...|+.+|...|.++....
T Consensus 95 ~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~-~~~~~---------------~~~~y~~~K~a~~~~~~~~~ 157 (227)
T PRK08219 95 WRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAG-LRANP---------------GWGSYAASKFALRALADALR 157 (227)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHh-cCcCC---------------CCchHHHHHHHHHHHHHHHH
Confidence 45567888888 55555555554 468999999874 32110 14689999999998887764
Q ss_pred CCCCCCCCCCC-ceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKC-LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~g-l~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.. ..+ +++.+++|+.+.++... .+... .+. ......+++++|++++++.+++
T Consensus 158 ~~------~~~~i~~~~i~pg~~~~~~~~----~~~~~--~~~-------~~~~~~~~~~~dva~~~~~~l~ 210 (227)
T PRK08219 158 EE------EPGNVRVTSVHPGRTDTDMQR----GLVAQ--EGG-------EYDPERYLRPETVAKAVRFAVD 210 (227)
T ss_pred HH------hcCCceEEEEecCCccchHhh----hhhhh--hcc-------ccCCCCCCCHHHHHHHHHHHHc
Confidence 21 123 89999999877654221 11110 111 1122468999999999999986
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00012 Score=68.00 Aligned_cols=136 Identities=14% Similarity=0.144 Sum_probs=90.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+. + ..++|++||..+ +++.+ ....|+.+|...|.+...
T Consensus 107 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~-~~~~~---------------~~~~Y~~sK~a~~~~~~~ 170 (260)
T PRK06198 107 LFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA-HGGQP---------------FLAAYCASKGALATLTRN 170 (260)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc-ccCCC---------------CcchhHHHHHHHHHHHHH
Confidence 34567899999999999988653 2 357999999874 43211 146899999999998886
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..... ...+++++.++|+.++++.... ....++....... ....+++.+|+++++..++.
T Consensus 171 ~a~e~----~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~ 237 (260)
T PRK06198 171 AAYAL----LRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------PFGRLLDPDEVARAVAFLLS 237 (260)
T ss_pred HHHHh----cccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------CccCCcCHHHHHHHHHHHcC
Confidence 54211 2357999999999999885421 1112222222111 12346889999999998875
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.. .....|+.+.+.++.
T Consensus 238 ~~---------~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 238 DE---------SGLMTGSVIDFDQSV 254 (260)
T ss_pred hh---------hCCccCceEeECCcc
Confidence 21 234578888777664
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00024 Score=65.98 Aligned_cols=138 Identities=19% Similarity=0.120 Sum_probs=92.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.. .+..++|++||..... +..+ ...|+.||+..|.+++..
T Consensus 110 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~----~~~Y~~sK~a~~~~~~~l 173 (255)
T PRK06113 110 DFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------KNIN----MTSYASSKAAASHLVRNM 173 (255)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC------------CCCC----cchhHHHHHHHHHHHHHH
Confidence 4556689999999999999973 3456899999976311 1111 468999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..+. ...++++.++.|+.+--+..... .+..........+ ...+...+|+++++..++...
T Consensus 174 a~~~----~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l~~~~----- 235 (255)
T PRK06113 174 AFDL----GEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP---------IRRLGQPQDIANAALFLCSPA----- 235 (255)
T ss_pred HHHh----hhhCeEEEEEecccccccccccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcc-----
Confidence 5321 23679999999998865532221 1233222222211 123568899999999887510
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|...
T Consensus 236 ----~~~~~G~~i~~~gg~~~ 252 (255)
T PRK06113 236 ----ASWVSGQILTVSGGGVQ 252 (255)
T ss_pred ----ccCccCCEEEECCCccc
Confidence 23457899998887543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00019 Score=66.47 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=76.7
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++ ++.+.+++|++||..... +..+ ...|+.||...|.+.+..
T Consensus 98 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~----~~~Y~~sK~~~~~~~~~l 161 (248)
T PRK10538 98 DWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------PYAG----GNVYGATKAFVRQFSLNL 161 (248)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC------------CCCC----CchhHHHHHHHHHHHHHH
Confidence 44677899999965555554 566778999999976411 1112 478999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...++.+.+++|+.+.|+..... +..-.... .. .+ + ...++..+|+|++++.++.
T Consensus 162 ~~~~----~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~--~~---~~-~---~~~~~~~~dvA~~~~~l~~ 221 (248)
T PRK10538 162 RTDL----HGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKA--EK---TY-Q---NTVALTPEDVSEAVWWVAT 221 (248)
T ss_pred HHHh----cCCCcEEEEEeCCeecccccchhhccCcHHHH--Hh---hc-c---ccCCCCHHHHHHHHHHHhc
Confidence 4321 23689999999999987643210 00000000 00 00 0 1135789999999998875
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00024 Score=64.80 Aligned_cols=136 Identities=16% Similarity=0.072 Sum_probs=87.9
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++. +.+.+++|++||.. .|+.. ....|+.||+..|.++...
T Consensus 91 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~----------------~~~~Y~~sK~a~~~~~~~~ 153 (234)
T PRK07577 91 ALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGAL----------------DRTSYSAAKSALVGCTRTW 153 (234)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCC----------------CchHHHHHHHHHHHHHHHH
Confidence 455678899999888776664 46778999999986 45421 1368999999999888775
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.... .+.|++++++||+.+..+..... .+..........+ .......+|++++++.++...
T Consensus 154 a~e~----~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~a~~~~~l~~~~--- 217 (234)
T PRK07577 154 ALEL----AEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP---------MRRLGTPEEVAAAIAFLLSDD--- 217 (234)
T ss_pred HHHH----HhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC---------CCCCcCHHHHHHHHHHHhCcc---
Confidence 4210 22589999999999987642211 1111111111111 112457899999999887521
Q ss_pred CCCCCCCCCCCCceEEEeCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.++..
T Consensus 218 ------~~~~~g~~~~~~g~~~ 233 (234)
T PRK07577 218 ------AGFITGQVLGVDGGGS 233 (234)
T ss_pred ------cCCccceEEEecCCcc
Confidence 2345688888876643
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00016 Score=71.02 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=75.1
Q ss_pred hhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC
Q 016468 10 GRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFK 89 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~ 89 (389)
..-+.|...|++|+++||+.+||+|+|++||++. . +-+.++..... ...+-.+|..+|+.+.+.
T Consensus 171 ~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~---~------~~~~~~~~~~~-~~~~~~~k~~~e~~~~~S------ 234 (411)
T KOG1203|consen 171 VTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG---T------KFNQPPNILLL-NGLVLKAKLKAEKFLQDS------ 234 (411)
T ss_pred CCcceecHHHHHHHHHHHHHhCCceEEEEEeecC---c------ccCCCchhhhh-hhhhhHHHHhHHHHHHhc------
Confidence 3456889999999999999999999999998773 1 22222221111 235558899999998754
Q ss_pred CCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 90 KNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 90 ~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
|++.+||||+...=.... .... ..+.....-+++.. -.+...|+|+.++.++.
T Consensus 235 -----gl~ytiIR~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~--~~i~r~~vael~~~all 288 (411)
T KOG1203|consen 235 -----GLPYTIIRPGGLEQDTGGQREVV------VDDEKELLTVDGGA--YSISRLDVAELVAKALL 288 (411)
T ss_pred -----CCCcEEEeccccccCCCCcceec------ccCccccccccccc--eeeehhhHHHHHHHHHh
Confidence 699999999876532211 1100 00111111122211 36788999999999886
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00013 Score=67.35 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=88.2
Q ss_pred cchhhhHhhhh----HHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNIN----GTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~----gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+. +++++++++++.+.+++|++||..+ +.+. + ....|+.+|...+.+++.+
T Consensus 102 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~-~~~~---------~------~~~~Y~~sK~a~~~~~~~l 165 (251)
T PRK07069 102 EWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAA-FKAE---------P------DYTAYNASKAAVASLTKSI 165 (251)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhh-ccCC---------C------CCchhHHHHHHHHHHHHHH
Confidence 44567788988 8889999998888889999999874 3221 1 1467999999999888865
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHH-----HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-----~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
..... .++.++++++++|+.+.+|....... .....+.++. ....+.+++|++++++.++...
T Consensus 166 a~e~~--~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~- 233 (251)
T PRK07069 166 ALDCA--RRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV---------PLGRLGEPDDVAHAVLYLASDE- 233 (251)
T ss_pred HHHhc--ccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC---------CCCCCcCHHHHHHHHHHHcCcc-
Confidence 42110 02246899999999998875432111 1111222221 1123567999999998876411
Q ss_pred CCCCCCCCCCCCCCceEEEeCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 234 --------~~~~~g~~i~~~~g 247 (251)
T PRK07069 234 --------SRFVTGAELVIDGG 247 (251)
T ss_pred --------ccCccCCEEEECCC
Confidence 23456777666544
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00022 Score=66.11 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=91.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+...++|+.++.++++++.. .+..++|++||....++. . ....|+.||+..|.+++.
T Consensus 108 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~----~~~~Y~~sK~a~~~~~~~ 171 (254)
T PRK08085 108 QEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR------------D----TITPYAASKGAVKMLTRG 171 (254)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC------------C----CCcchHHHHHHHHHHHHH
Confidence 34567899999999998888765 456789999997642211 1 147899999999999998
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.+..+..... .+.+...+.... ....+...+|++.++..++...
T Consensus 172 la~e~----~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~~va~~~~~l~~~~--- 235 (254)
T PRK08085 172 MCVEL----ARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRT---------PAARWGDPQELIGAAVFLSSKA--- 235 (254)
T ss_pred HHHHH----HhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcc---
Confidence 75321 23589999999999988743321 122222222221 1124677899999988877521
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+...+.+|.
T Consensus 236 ------~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 236 ------SDFVNGHLLFVDGGM 250 (254)
T ss_pred ------ccCCcCCEEEECCCe
Confidence 345578877766553
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00028 Score=64.65 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=88.3
Q ss_pred cchhhhHhhhhHHHHHHHH----HHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEA----CLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~a----a~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+++...++|+.++.++.++ +++.+.+++|++||.....+. .. ...|+.+|...+.+++.+
T Consensus 101 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------~~----~~~y~~sk~a~~~~~~~l 164 (242)
T TIGR01829 101 QWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ------------FG----QTNYSAAKAGMIGFTKAL 164 (242)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC------------CC----cchhHHHHHHHHHHHHHH
Confidence 4566778999997775544 456678899999997542211 11 468999999888887776
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...++++.+++|+.+.++......+.++.....+.+. ..+...+|+++++..+... +
T Consensus 165 a~~~----~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~a~~~~~l~~~---~--- 225 (242)
T TIGR01829 165 AQEG----ATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPV---------GRLGRPEEIAAAVAFLASE---E--- 225 (242)
T ss_pred HHHh----hhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCc---h---
Confidence 4210 2358999999999998875543334444444333221 1234568899888766531 0
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 226 ---~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 226 ---AGYITGATLSINGGL 240 (242)
T ss_pred ---hcCccCCEEEecCCc
Confidence 233578888887764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00044 Score=63.20 Aligned_cols=135 Identities=12% Similarity=0.115 Sum_probs=87.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.+++.++... +..++|++||... +..+..+ ...|+.+|+..|.+++....
T Consensus 98 ~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~-----------~~~~~~~----~~~Y~~sKaa~~~~~~~la~ 162 (237)
T PRK12742 98 DIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG-----------DRMPVAG----MAAYAASKSALQGMARGLAR 162 (237)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc-----------ccCCCCC----CcchHHhHHHHHHHHHHHHH
Confidence 46778999999999998777664 3468999999653 1112222 57899999999999887643
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
.. .+.|+++.+++|+.+..+......+ .........+ ...+...+|+++++..++...
T Consensus 163 ~~----~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~---------~~~~~~p~~~a~~~~~l~s~~-------- 220 (237)
T PRK12742 163 DF----GPRGITINVVQPGPIDTDANPANGP-MKDMMHSFMA---------IKRHGRPEEVAGMVAWLAGPE-------- 220 (237)
T ss_pred HH----hhhCeEEEEEecCcccCCccccccH-HHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCcc--------
Confidence 21 2367999999999987653221111 1122211110 113567899999998887521
Q ss_pred CCCCCCCceEEEeCC
Q 016468 166 GRPIASGQPYFVSDG 180 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 221 -~~~~~G~~~~~dgg 234 (237)
T PRK12742 221 -ASFVTGAMHTIDGA 234 (237)
T ss_pred -cCcccCCEEEeCCC
Confidence 33456777766554
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00036 Score=63.77 Aligned_cols=135 Identities=11% Similarity=0.137 Sum_probs=89.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.. .+-.++|++||....++. + ....|+.+|+..|.+....
T Consensus 91 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~------~~~~Y~~sK~a~~~~~~~l 154 (235)
T PRK06550 91 EWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG----------G------GGAAYTASKHALAGFTKQL 154 (235)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------C------CCcccHHHHHHHHHHHHHH
Confidence 5667899999999999999864 344689999997743221 1 1468999999988887766
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..+. ...|+++++++|+.|..+...... ..+........ ....+...+|++++++.++...
T Consensus 155 a~~~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~s~~---- 217 (235)
T PRK06550 155 ALDY----AKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARET---------PIKRWAEPEEVAELTLFLASGK---- 217 (235)
T ss_pred HHHh----hhcCeEEEEEeeCCccCcccccccCchHHHHHHhccC---------CcCCCCCHHHHHHHHHHHcChh----
Confidence 4321 235899999999999877432111 12222222221 1123677899999999987521
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 218 -----~~~~~g~~~~~~gg 231 (235)
T PRK06550 218 -----ADYMQGTIVPIDGG 231 (235)
T ss_pred -----hccCCCcEEEECCc
Confidence 23456777776655
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00026 Score=65.38 Aligned_cols=148 Identities=16% Similarity=0.100 Sum_probs=90.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCC----------------CCCCCCCCCCCc
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNES----------------LPYFPIDEHVDS 68 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~----------------~p~~p~~~~~~~ 68 (389)
.+.+..+++|+.++.++++++... .-.++|++||..+ |+.....+..|. .|. .....
T Consensus 62 ~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 136 (241)
T PRK12428 62 APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAG-AEWPQRLELHKALAATASFDEGAAWLAAHPV----ALATG 136 (241)
T ss_pred CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHh-hccccchHHHHhhhccchHHHHHHhhhccCC----CcccH
Confidence 356788999999999999999864 2359999999884 542211111110 121 22578
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHH-HHHHcCCCcceecCCCccccceeHHHH
Q 016468 69 YGRSKSVAEQLVLKSN-GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIV-SLAKLGLVPFKIGEPSVKTDWIYVDNL 146 (389)
Q Consensus 69 Y~~SK~~aE~~l~~~~-~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li-~~~~~g~~~~~~g~~~~~~~~v~vdDl 146 (389)
|+.||+..+.+.+... .+ + .+.|+++.+++|+.|.++-........- ....... .....+...+|+
T Consensus 137 Y~~sK~a~~~~~~~la~~e-~---~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--------~~~~~~~~pe~v 204 (241)
T PRK12428 137 YQLSKEALILWTMRQAQPW-F---GARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDA--------KRMGRPATADEQ 204 (241)
T ss_pred HHHHHHHHHHHHHHHHHHh-h---hccCeEEEEeecCCccCcccccchhhhhhHhhhhcc--------cccCCCCCHHHH
Confidence 9999999998887665 21 1 2368999999999998874332111000 0000000 011124678999
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 147 VLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 147 a~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
++++..++.. ......|+.+.+.+|
T Consensus 205 a~~~~~l~s~---------~~~~~~G~~i~vdgg 229 (241)
T PRK12428 205 AAVLVFLCSD---------AARWINGVNLPVDGG 229 (241)
T ss_pred HHHHHHHcCh---------hhcCccCcEEEecCc
Confidence 9999887641 023455776666554
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00035 Score=64.16 Aligned_cols=135 Identities=17% Similarity=0.110 Sum_probs=87.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+...++|+.++.++++++.+. ...++|++||... +. +..+ ...|+.+|...|.+++....
T Consensus 106 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~-~~-----------~~~~----~~~Y~~sK~a~~~~~~~~a~ 169 (245)
T PRK12937 106 DFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVI-AL-----------PLPG----YGPYAASKAAVEGLVHVLAN 169 (245)
T ss_pred HHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccc-cC-----------CCCC----CchhHHHHHHHHHHHHHHHH
Confidence 45667889999999999999764 2358999998763 11 1111 47899999999999987642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCC-CCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGE-ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~-~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.. ...++.+++++|+.+-.+.. ....+.....+....+. .-+.+.+|+++++..++..
T Consensus 170 ~~----~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~a~~~~~l~~~-------- 228 (245)
T PRK12937 170 EL----RGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPL---------ERLGTPEEIAAAVAFLAGP-------- 228 (245)
T ss_pred Hh----hhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCc--------
Confidence 11 22579999999988765531 11123333333332211 1245789999998887741
Q ss_pred CCCCCCCCceEEEeCC
Q 016468 165 KGRPIASGQPYFVSDG 180 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~ 180 (389)
......|+.+++.++
T Consensus 229 -~~~~~~g~~~~~~~g 243 (245)
T PRK12937 229 -DGAWVNGQVLRVNGG 243 (245)
T ss_pred -cccCccccEEEeCCC
Confidence 023456788877654
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00017 Score=69.62 Aligned_cols=98 Identities=15% Similarity=0.071 Sum_probs=65.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C--CCeEEEecCCceecC---CcccCCC--C------------------CCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G--IQRLVYVSTYNVVFG---GKEIVNG--N------------------ESL 57 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g--vkrlV~~SS~~vvyg---~~~~~~~--~------------------E~~ 57 (389)
.+.+..+++|+.|+.++++++... + ..|+|++||..+.++ +....+. + +..
T Consensus 106 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (322)
T PRK07453 106 QGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGK 185 (322)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCcc
Confidence 356788999999999999888752 2 359999999875442 1100000 0 111
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCC
Q 016468 58 PYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE 111 (389)
Q Consensus 58 p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~ 111 (389)
++. +...|+.||...+.+..++.++.. ...|+.+.++||+.|++.+-
T Consensus 186 ~~~----~~~~Y~~SK~a~~~~~~~la~~~~---~~~gi~v~~v~PG~v~~t~~ 232 (322)
T PRK07453 186 KFK----PGKAYKDSKLCNMLTMRELHRRYH---ESTGITFSSLYPGCVADTPL 232 (322)
T ss_pred CCC----ccchhhHhHHHHHHHHHHHHHhhc---ccCCeEEEEecCCcccCCcc
Confidence 222 267899999988877777654320 12579999999999987543
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00012 Score=70.43 Aligned_cols=133 Identities=13% Similarity=0.018 Sum_probs=78.5
Q ss_pred cchhhhHhhhhHHHHHHH----HHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIE----ACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~----aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+ .+++.+..|+|++||....++.......+...++.+ ...|+.||...+.+.+.+
T Consensus 120 ~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~----~~~Y~~SK~a~~~~~~~l 195 (315)
T PRK06196 120 GWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDK----WLAYGQSKTANALFAVHL 195 (315)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCCh----HHHHHHHHHHHHHHHHHH
Confidence 456778999999655555 455566679999999764322211100111122222 468999999999888766
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHH-HH--HHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPR-IV--SLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~-li--~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++++++|+.|.++-....... .. ..+.... .++ + ..+...+|.|.+++.++.
T Consensus 196 a~~~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~~~~~~a~~~~~l~~ 259 (315)
T PRK06196 196 DKLG----KDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHG-NPI-D-----PGFKTPAQGAATQVWAAT 259 (315)
T ss_pred HHHh----cCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhh-hhh-h-----hhcCCHhHHHHHHHHHhc
Confidence 4311 23689999999999998854321110 00 0010000 000 0 024567999999998885
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00041 Score=64.31 Aligned_cols=135 Identities=10% Similarity=0.075 Sum_probs=89.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++.+ .+.+++|++||..+..+. + ....|+.+|...+.+++..
T Consensus 111 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~----------~------~~~~Y~~sK~a~~~~~~~l 174 (256)
T PRK06124 111 AIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR----------A------GDAVYPAAKQGLTGLMRAL 174 (256)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC----------C------CccHhHHHHHHHHHHHHHH
Confidence 4566789999999999977754 567899999997642211 1 1368999999999888776
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...++++.+++|+.|.++..... -..+........ ....+++.+|++++++.++...
T Consensus 175 a~e~----~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~l~~~~---- 237 (256)
T PRK06124 175 AAEF----GPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRT---------PLGRWGRPEEIAGAAVFLASPA---- 237 (256)
T ss_pred HHHH----HHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCcc----
Confidence 4211 22579999999999998753321 122222222211 1124789999999999988621
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 238 -----~~~~~G~~i~~dgg 251 (256)
T PRK06124 238 -----ASYVNGHVLAVDGG 251 (256)
T ss_pred -----cCCcCCCEEEECCC
Confidence 22346777666544
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00056 Score=64.11 Aligned_cols=118 Identities=11% Similarity=-0.015 Sum_probs=76.3
Q ss_pred cchhhhHhhhhHHHHHHHH----HHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEA----CLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~a----a~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.++ +++.+..++|++||..++ .+ ... ...|+.||+..+.+...+
T Consensus 100 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~-----------~~~----~~~Y~~sKaa~~~~~~~l 163 (270)
T PRK05650 100 DWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGL-MQ-----------GPA----MSSYNVAKAGVVALSETL 163 (270)
T ss_pred HHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhc-CC-----------CCC----chHHHHHHHHHHHHHHHH
Confidence 3445678998887776665 566778899999998742 11 111 478999999877666655
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++++++|+.+..+..... .+......... ....+++++|+|+.++.+++
T Consensus 164 ~~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~vA~~i~~~l~ 224 (270)
T PRK05650 164 LVEL----ADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKL----------LEKSPITAADIADYIYQQVA 224 (270)
T ss_pred HHHh----cccCcEEEEEecCccccCcccccccCchhHHHHHHHH----------hhcCCCCHHHHHHHHHHHHh
Confidence 4211 23689999999999987643311 11111111100 01135789999999999987
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00033 Score=64.55 Aligned_cols=135 Identities=16% Similarity=0.133 Sum_probs=87.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.. .+ ..++|++||..+ +.+. + ....|+.||+..+.+++.
T Consensus 103 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~---------~------~~~~Y~~sKaa~~~~~~~ 166 (248)
T TIGR01832 103 DWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS-FQGG---------I------RVPSYTASKHGVAGLTKL 166 (248)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh-ccCC---------C------CCchhHHHHHHHHHHHHH
Confidence 4567788999999999999864 33 468999999874 4321 1 135799999999998888
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++++++|+.|..+...... ......... . . ....++..+|+|+++..++...
T Consensus 167 la~e~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~-~-------~~~~~~~~~dva~~~~~l~s~~--- 230 (248)
T TIGR01832 167 LANEW----AAKGINVNAIAPGYMATNNTQALRADEDRNAAILE-R-I-------PAGRWGTPDDIGGPAVFLASSA--- 230 (248)
T ss_pred HHHHh----CccCcEEEEEEECcCcCcchhccccChHHHHHHHh-c-C-------CCCCCcCHHHHHHHHHHHcCcc---
Confidence 75321 235899999999999876432110 111111111 1 0 1135899999999999887511
Q ss_pred CCCCCCCCCCCCceEEEeCC
Q 016468 161 IPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 231 ------~~~~~G~~i~~dgg 244 (248)
T TIGR01832 231 ------SDYVNGYTLAVDGG 244 (248)
T ss_pred ------ccCcCCcEEEeCCC
Confidence 23345776665444
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00026 Score=65.84 Aligned_cols=110 Identities=16% Similarity=0.080 Sum_probs=77.8
Q ss_pred CcchhhhHhhhhHHHHHHH----HHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIE----ACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~----aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+...++|+.|+.++++ ++++.+.+++|++||...+++. | ....|+.||+..|.++..
T Consensus 101 ~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~----------~------~~~~Y~asK~a~~~~~~~ 164 (257)
T PRK07024 101 AVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL----------P------GAGAYSASKAAAIKYLES 164 (257)
T ss_pred HHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC----------C------CCcchHHHHHHHHHHHHH
Confidence 3466788999999999777 5566677899999997754331 1 146899999999998877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... +..|++++++||+.|.++.... .. . .. -.++..+|+++.++.++.
T Consensus 165 l~~e~----~~~gi~v~~v~Pg~v~t~~~~~-----------~~-~---~~----~~~~~~~~~a~~~~~~l~ 214 (257)
T PRK07024 165 LRVEL----RPAGVRVVTIAPGYIRTPMTAH-----------NP-Y---PM----PFLMDADRFAARAARAIA 214 (257)
T ss_pred HHHHh----hccCcEEEEEecCCCcCchhhc-----------CC-C---CC----CCccCHHHHHHHHHHHHh
Confidence 63210 2368999999999998763211 00 0 00 013679999999999986
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00021 Score=65.52 Aligned_cols=121 Identities=15% Similarity=0.052 Sum_probs=78.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+...++|+.++.++++++.+ .+.+++|++||... +.+ ..+ ...|+.+|...|.+...
T Consensus 96 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~-~~~-----------~~~----~~~y~~sK~a~~~~~~~ 159 (238)
T PRK08264 96 DALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLS-WVN-----------FPN----LGTYSASKAAAWSLTQA 159 (238)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh-ccC-----------CCC----chHhHHHHHHHHHHHHH
Confidence 34566788999999999999763 46778999999764 321 111 47899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-----C-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----R-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..... ...+++++++||+.+.++... . ....+...+..... .....++.+|.++.+..+..
T Consensus 160 l~~~~----~~~~i~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~ 226 (238)
T PRK08264 160 LRAEL----APQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQILDALE--------AGDEEVLPDEMARQVKAALS 226 (238)
T ss_pred HHHHh----hhcCeEEEEEeCCcccccccccCCcCCCCHHHHHHHHHHHHh--------CCCCeEeccHHHHHHHHHhh
Confidence 64211 225899999999999776321 0 11122222221110 01245677778887777765
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00021 Score=67.35 Aligned_cols=81 Identities=23% Similarity=0.162 Sum_probs=60.9
Q ss_pred chhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+..+++|+.| ++++++.+++.+.+++|++||... +. +..+ ...|+.||+..|.++..+.
T Consensus 100 ~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~-~~-----------~~~~----~~~Y~asK~a~~~~~~~l~ 163 (277)
T PRK05993 100 LRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG-LV-----------PMKY----RGAYNASKFAIEGLSLTLR 163 (277)
T ss_pred HHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh-cC-----------CCCc----cchHHHHHHHHHHHHHHHH
Confidence 45678999999 777888888888889999999653 11 1111 5789999999999988764
Q ss_pred CCCCCCCCCCCceEEEEecCceecC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
... .+.|+++++++|+.|-.+
T Consensus 164 ~el----~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 164 MEL----QGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHh----hhhCCEEEEEecCCccCc
Confidence 211 236899999999988644
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00049 Score=63.92 Aligned_cols=132 Identities=13% Similarity=0.019 Sum_probs=84.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++... +.+++|++||..+ +++ ... ...|+.||+..|.++...
T Consensus 118 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~l 181 (256)
T PRK12748 118 QLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS-LGP-----------MPD----ELAYAATKGAIEAFTKSL 181 (256)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc-cCC-----------CCC----chHHHHHHHHHHHHHHHH
Confidence 45667899999999999998753 4468999999763 321 111 468999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...++++++++|+.+..+... ........... +. ..+...+|+++++..++...
T Consensus 182 a~e~----~~~~i~v~~i~Pg~~~t~~~~---~~~~~~~~~~~----~~-----~~~~~~~~~a~~~~~l~~~~------ 239 (256)
T PRK12748 182 APEL----AEKGITVNAVNPGPTDTGWIT---EELKHHLVPKF----PQ-----GRVGEPVDAARLIAFLVSEE------ 239 (256)
T ss_pred HHHH----HHhCeEEEEEEeCcccCCCCC---hhHHHhhhccC----CC-----CCCcCHHHHHHHHHHHhCcc------
Confidence 4211 225799999999887654222 11111111111 00 12345689999988776410
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+++.++
T Consensus 240 ---~~~~~g~~~~~d~g 253 (256)
T PRK12748 240 ---AKWITGQVIHSEGG 253 (256)
T ss_pred ---cccccCCEEEecCC
Confidence 22345888888655
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00037 Score=64.68 Aligned_cols=139 Identities=16% Similarity=0.212 Sum_probs=84.3
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++. +.+..++|++||...++|.. . +...|+.+|+..+.+....
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~-----------~----~~~~Y~~sKaal~~~~~~l 168 (255)
T PRK06057 104 AWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA-----------T----SQISYTASKGGVLAMSREL 168 (255)
T ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC-----------C----CCcchHHHHHHHHHHHHHH
Confidence 356788899999988887765 34556899999976444421 0 1367999998776666543
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...|++++++||+.+.++........-.....+.. ..... ..+..++|+++++...+..
T Consensus 169 ~~~~----~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~a~~~~~l~~~------- 231 (255)
T PRK06057 169 GVQF----ARQGIRVNALCPGPVNTPLLQELFAKDPERAARRL--VHVPM----GRFAEPEEIAAAVAFLASD------- 231 (255)
T ss_pred HHHH----HhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHH--hcCCC----CCCcCHHHHHHHHHHHhCc-------
Confidence 2110 12579999999999988753321110001111000 00011 1478899999998776641
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.++
T Consensus 232 --~~~~~~g~~~~~~~g 246 (255)
T PRK06057 232 --DASFITASTFLVDGG 246 (255)
T ss_pred --cccCccCcEEEECCC
Confidence 133455777777554
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00053 Score=63.17 Aligned_cols=136 Identities=16% Similarity=0.102 Sum_probs=84.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc-CC------CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF-GI------QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~-gv------krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
+.+..+++|+.++.++++++.+. .. .++|++||...+++... . ...|+.||...+.++
T Consensus 104 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-----------~----~~~Y~~sK~~~~~~~ 168 (248)
T PRK06947 104 RLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN-----------E----YVDYAGSKGAVDTLT 168 (248)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC-----------C----CcccHhhHHHHHHHH
Confidence 34567899999999998665432 22 35999999875544210 0 247999999999888
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..+.... ...+++++++||+.|..|... ...+.......... + . --...++|+++.++.++...
T Consensus 169 ~~la~~~----~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-----~--~~~~~~e~va~~~~~l~~~~-- 233 (248)
T PRK06947 169 LGLAKEL----GPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQT--P-----L--GRAGEADEVAETIVWLLSDA-- 233 (248)
T ss_pred HHHHHHh----hhhCcEEEEEeccCcccccccccCCHHHHHHHhhcC--C-----C--CCCcCHHHHHHHHHHHcCcc--
Confidence 7765321 225799999999999877422 11122222111111 0 0 11356899999999887621
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 234 -------~~~~~G~~~~~~gg 247 (248)
T PRK06947 234 -------ASYVTGALLDVGGG 247 (248)
T ss_pred -------ccCcCCceEeeCCC
Confidence 22356777766543
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00037 Score=63.91 Aligned_cols=111 Identities=16% Similarity=0.155 Sum_probs=78.3
Q ss_pred chhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+..+++|+.++.++++++.. .+.+++|++||...+++. .+ ...|+.+|...+.++..+.
T Consensus 108 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~------------~~----~~~Y~~sK~a~~~~~~~~a 171 (239)
T PRK07666 108 WEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA------------AV----TSAYSASKFGVLGLTESLM 171 (239)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC------------CC----CcchHHHHHHHHHHHHHHH
Confidence 456789999999999988864 467789999998754331 11 4679999999988887654
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... ++.|+++.++||+.+..+..... +. ..+++ ..++..+|++++++.+++
T Consensus 172 ~e~----~~~gi~v~~v~pg~v~t~~~~~~----------~~---~~~~~---~~~~~~~~~a~~~~~~l~ 222 (239)
T PRK07666 172 QEV----RKHNIRVTALTPSTVATDMAVDL----------GL---TDGNP---DKVMQPEDLAEFIVAQLK 222 (239)
T ss_pred HHh----hccCcEEEEEecCcccCcchhhc----------cc---cccCC---CCCCCHHHHHHHHHHHHh
Confidence 211 23689999999999987633210 00 00111 245789999999999987
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00056 Score=62.50 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=84.8
Q ss_pred chhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+..+++|+.++.+++++|.+. +.+++|++||... +. +..+ ...|+.+|+..+.+...+..
T Consensus 106 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~-~~-----------~~~~----~~~y~~sk~a~~~~~~~~~~ 169 (237)
T PRK07326 106 WRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG-TN-----------FFAG----GAAYNASKFGLVGFSEAAML 169 (237)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh-cc-----------CCCC----CchHHHHHHHHHHHHHHHHH
Confidence 4567889999999999998753 5568999999763 21 1111 46799999988887777532
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
.. +..|++++++||+.+..+....... . .....+..+|++++++.++..
T Consensus 170 ~~----~~~gi~v~~v~pg~~~t~~~~~~~~----------------~--~~~~~~~~~d~a~~~~~~l~~--------- 218 (237)
T PRK07326 170 DL----RQYGIKVSTIMPGSVATHFNGHTPS----------------E--KDAWKIQPEDIAQLVLDLLKM--------- 218 (237)
T ss_pred Hh----cccCcEEEEEeeccccCcccccccc----------------h--hhhccCCHHHHHHHHHHHHhC---------
Confidence 10 2368999999999987653221000 0 001136789999999999873
Q ss_pred CCCCCCCceEEEeCCCCC
Q 016468 166 GRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~ 183 (389)
.+...+..+.+.+++|.
T Consensus 219 -~~~~~~~~~~~~~~~~~ 235 (237)
T PRK07326 219 -PPRTLPSKIEVRPSRPP 235 (237)
T ss_pred -CccccccceEEecCCCC
Confidence 33444556666666554
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00072 Score=62.76 Aligned_cols=136 Identities=14% Similarity=0.044 Sum_probs=88.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+...++|+.++.++++++. +.+.+++|++||... +.+ ..+ ...|+.+|...+.++..
T Consensus 110 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 173 (257)
T PRK09242 110 DEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG-LTH-----------VRS----GAPYGMTKAALLQMTRN 173 (257)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECcccc-CCC-----------CCC----CcchHHHHHHHHHHHHH
Confidence 3566788999999999999885 355679999999764 221 111 46899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...++++.+++|+.|.++..... .+..........+. .-+...+|++.++..++...
T Consensus 174 la~e~----~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~--- 237 (257)
T PRK09242 174 LAVEW----AEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAAVAFLCMPA--- 237 (257)
T ss_pred HHHHH----HHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc---
Confidence 64211 23579999999999988754322 12222222222211 12445789999988877411
Q ss_pred CCCCCCCCCCCCceEEEeCC
Q 016468 161 IPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.++
T Consensus 238 ------~~~~~g~~i~~~gg 251 (257)
T PRK09242 238 ------ASYITGQCIAVDGG 251 (257)
T ss_pred ------cccccCCEEEECCC
Confidence 22346787777554
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00014 Score=67.31 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=55.7
Q ss_pred chhhhHhhhhHHHHHHHH----HHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEA----CLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~a----a~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+..+++|+.++.++.++ +++.+.+++|++||.....+ .+ ....|+.||...|.+.....
T Consensus 97 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~----------~~------~~~~Y~~sK~a~~~~~~~l~ 160 (257)
T PRK09291 97 VRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT----------GP------FTGAYCASKHALEAIAEAMH 160 (257)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC----------CC------CcchhHHHHHHHHHHHHHHH
Confidence 455778899987766554 45667789999999764221 11 14689999999998887653
Q ss_pred CCCCCCCCCCCceEEEEecCcee
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIY 107 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~Iy 107 (389)
... +..|++++++||+.+.
T Consensus 161 ~~~----~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 161 AEL----KPFGIQVATVNPGPYL 179 (257)
T ss_pred HHH----HhcCcEEEEEecCccc
Confidence 210 2368999999998763
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00043 Score=63.77 Aligned_cols=109 Identities=21% Similarity=0.141 Sum_probs=77.7
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++. +.+.+++|++||...++|. | . +...|+.||+..|.+...+
T Consensus 104 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~-~----~~~~Y~~sK~a~~~~~~~l 168 (248)
T PRK08251 104 ANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------P-G----VKAAYAASKAGVASLGEGL 168 (248)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------C-C----CcccHHHHHHHHHHHHHHH
Confidence 345678899999999998875 4577899999998754431 1 0 1478999999999888776
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...++++++++|+.+.++.... . +. ....+..+|.+++++.+++
T Consensus 169 ~~~~----~~~~i~v~~v~pg~v~t~~~~~--------~--~~----------~~~~~~~~~~a~~i~~~~~ 216 (248)
T PRK08251 169 RAEL----AKTPIKVSTIEPGYIRSEMNAK--------A--KS----------TPFMVDTETGVKALVKAIE 216 (248)
T ss_pred HHHh----cccCcEEEEEecCcCcchhhhc--------c--cc----------CCccCCHHHHHHHHHHHHh
Confidence 5321 2357999999999997653221 0 00 1125778999999999986
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00067 Score=62.15 Aligned_cols=119 Identities=12% Similarity=0.033 Sum_probs=78.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHH-----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL-----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~-----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++..+++|+.++.++++++. +.+.+++|++||...+++.. ....|+.+|+..+.+.+
T Consensus 98 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------------~~~~Y~~sK~a~~~~~~ 161 (239)
T TIGR01831 98 EDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR----------------GQVNYSAAKAGLIGATK 161 (239)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------------CCcchHHHHHHHHHHHH
Confidence 4567789999999999999873 24556899999987655421 13689999998887776
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...... .+.|+++..++|+.+.++..... +..........+. .-+...+|+++++..++.
T Consensus 162 ~la~e~----~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~ 221 (239)
T TIGR01831 162 ALAVEL----AKRKITVNCIAPGLIDTEMLAEV-EHDLDEALKTVPM---------NRMGQPAEVASLAGFLMS 221 (239)
T ss_pred HHHHHH----hHhCeEEEEEEEccCccccchhh-hHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcC
Confidence 653211 22579999999999976643321 1111112111111 124567999999999875
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0011 Score=61.50 Aligned_cols=138 Identities=15% Similarity=0.032 Sum_probs=90.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.. .+..++|++||.....+ .. ....|+.||+..|.+++.
T Consensus 98 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------~~----~~~~Y~~sK~a~~~l~~~ 161 (252)
T PRK07856 98 FHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP------------SP----GTAAYGAAKAGLLNLTRS 161 (252)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC------------CC----CCchhHHHHHHHHHHHHH
Confidence 4567889999999999999865 23468999999874211 11 147899999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
...+. ... +.+.+++|+.|..+..... .+..........+ ...+...+|+++++..++...
T Consensus 162 la~e~----~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~va~~~~~L~~~~--- 224 (252)
T PRK07856 162 LAVEW----APK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP---------LGRLATPADIAWACLFLASDL--- 224 (252)
T ss_pred HHHHh----cCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHcCcc---
Confidence 75321 123 8999999999876532211 0111222222111 123467899999998877510
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+.+.+|...+
T Consensus 225 ------~~~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 225 ------ASYVSGANLEVHGGGERP 242 (252)
T ss_pred ------cCCccCCEEEECCCcchH
Confidence 234678888887776544
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0011 Score=61.48 Aligned_cols=137 Identities=16% Similarity=0.138 Sum_probs=87.8
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++. +.+..++|++||.....+. +..+ ...|+.||+..+.+++..
T Consensus 109 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~----~~~Y~~sKaa~~~l~~~l 174 (254)
T PRK06114 109 QWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN----------RGLL----QAHYNASKAGVIHLSKSL 174 (254)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC----------CCCC----cchHHHHHHHHHHHHHHH
Confidence 456778899999977777664 4456789999997743221 1001 368999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.... ...|+++.+++|+.|..+-... .............+. .-+...+|++.+++.++..
T Consensus 175 a~e~----~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~~~~l~s~------ 235 (254)
T PRK06114 175 AMEW----VGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPM---------QRMAKVDEMVGPAVFLLSD------ 235 (254)
T ss_pred HHHH----hhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCc------
Confidence 5311 2368999999999998764321 111112222211111 1246789999999887641
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
......|+++.+.+|
T Consensus 236 ---~~~~~tG~~i~~dgg 250 (254)
T PRK06114 236 ---AASFCTGVDLLVDGG 250 (254)
T ss_pred ---cccCcCCceEEECcC
Confidence 134567888877665
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00048 Score=73.35 Aligned_cols=146 Identities=18% Similarity=0.239 Sum_probs=88.1
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+...++|+.++.++.+++. +.+ -.++|++||.+++++.. ....|+.||+..|.+++.
T Consensus 516 ~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~----------------~~~aY~aSKaA~~~l~r~ 579 (676)
T TIGR02632 516 EWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK----------------NASAYSAAKAAEAHLARC 579 (676)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC----------------CCHHHHHHHHHHHHHHHH
Confidence 345677889988877765554 333 24899999987654421 147899999999999987
Q ss_pred hCCCCCCCCCCCCceEEEEecCcee-cCCCCCCHHHHHHHHHcCCCc----ceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIY-GPGEERHLPRIVSLAKLGLVP----FKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~Iy-Gp~~~~~~~~li~~~~~g~~~----~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
+.... ...|+++.+++|+.|+ |.+....-....+....+... ..+........+++.+|+++++..++...
T Consensus 580 lA~el----~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~ 655 (676)
T TIGR02632 580 LAAEG----GTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSK 655 (676)
T ss_pred HHHHh----cccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence 65321 2358999999999987 432110000000000001000 00111222345789999999999876411
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 656 ---------~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 656 ---------SEKTTGCIITVDGGVP 671 (676)
T ss_pred ---------ccCCcCcEEEECCCch
Confidence 3345688888877654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00048 Score=63.38 Aligned_cols=108 Identities=20% Similarity=0.205 Sum_probs=76.9
Q ss_pred chhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+..+++|+.|+.++++++... +-+++|++||....++. + . ...|+.||+..|.+.+.+...
T Consensus 95 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----------~--~----~~~Y~asK~a~~~~~~~l~~e 158 (240)
T PRK06101 95 MARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL----------P--R----AEAYGASKAAVAYFARTLQLD 158 (240)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC----------C--C----CchhhHHHHHHHHHHHHHHHH
Confidence 3567999999999999999863 33579999987643221 1 1 468999999999998765421
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
. ...|++++++||+.|+++-.+.. . . ..+ ..+..+|+++.++.+++
T Consensus 159 ~----~~~gi~v~~v~pg~i~t~~~~~~-----------~-~---~~~----~~~~~~~~a~~i~~~i~ 204 (240)
T PRK06101 159 L----RPKGIEVVTVFPGFVATPLTDKN-----------T-F---AMP----MIITVEQASQEIRAQLA 204 (240)
T ss_pred H----HhcCceEEEEeCCcCCCCCcCCC-----------C-C---CCC----cccCHHHHHHHHHHHHh
Confidence 0 22689999999999998743310 0 0 000 13689999999999987
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00065 Score=63.13 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=86.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEe-cCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYV-STYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~-SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+...++|+.++.++++++... ...+++++ ||....+. + ....|+.||+..|.++..+.
T Consensus 112 ~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------~------~~~~Y~~sK~a~~~~~~~la 174 (257)
T PRK12744 112 EYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------P------FYSAYAGSKAPVEHFTRAAS 174 (257)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------C------CcccchhhHHHHHHHHHHHH
Confidence 46678899999999999999764 12467766 44322111 1 14789999999999999885
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.+. ...++++.+++|+.+..+.... ..+..... ... .....+-....+.+.+|++.++..+++.
T Consensus 175 ~e~----~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~------- 239 (257)
T PRK12744 175 KEF----GARGISVTAVGPGPMDTPFFYPQEGAEAVAY---HKT-AAALSPFSKTGLTDIEDIVPFIRFLVTD------- 239 (257)
T ss_pred HHh----CcCceEEEEEecCccccchhccccccchhhc---ccc-cccccccccCCCCCHHHHHHHHHHhhcc-------
Confidence 321 2257999999999997653211 00111000 000 0001111112478899999999998861
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+++++.+|..
T Consensus 240 ---~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 240 ---GWWITGQTILINGGYT 255 (257)
T ss_pred ---cceeecceEeecCCcc
Confidence 2233588888876643
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0016 Score=61.26 Aligned_cols=136 Identities=14% Similarity=0.089 Sum_probs=86.9
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++..+++++ ++.+..++|++||..+ +.+ ..+ ...|+.||+..|.+++.+
T Consensus 125 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~l~~~l 188 (278)
T PRK08277 125 GFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA-FTP-----------LTK----VPAYSAAKAAISNFTQWL 188 (278)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh-cCC-----------CCC----CchhHHHHHHHHHHHHHH
Confidence 45677889999998766655 3455678999999874 321 111 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
.... ...|+++.+++|+.|..+...... ......+.... ...-+...+|++++++.++..
T Consensus 189 a~e~----~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 189 AVHF----AKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT---------PMGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred HHHh----CccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC---------CccCCCCHHHHHHHHHHHcCc
Confidence 5321 236899999999999877432110 11111111111 112356789999999887641
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
- . .....|+.+.+.+|
T Consensus 256 ~--~------~~~~tG~~i~vdgG 271 (278)
T PRK08277 256 K--A------SSFVTGVVLPVDGG 271 (278)
T ss_pred c--c------cCCcCCCEEEECCC
Confidence 0 0 23457888877655
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0013 Score=60.70 Aligned_cols=135 Identities=16% Similarity=0.041 Sum_probs=87.0
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++ ++.+..++|++||...+.+ ..+ ...|+.||+..|.+++.+
T Consensus 109 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~----~~~Y~~sK~al~~~~~~l 172 (252)
T PRK07035 109 AFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP------------GDF----QGIYSITKAAVISMTKAF 172 (252)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC------------CCC----CcchHHHHHHHHHHHHHH
Confidence 35568889999999888777 4456779999999764221 111 578999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..+. ...|+++..+.|+.|-.+-.... -...........+ ...+...+|+++++...+...
T Consensus 173 ~~e~----~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~~~~---- 235 (252)
T PRK07035 173 AKEC----APFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP---------LRRHAEPSEMAGAVLYLASDA---- 235 (252)
T ss_pred HHHH----hhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC---------CCCcCCHHHHHHHHHHHhCcc----
Confidence 5321 23589999999998854422111 1122222222211 112556889999998877521
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 236 -----~~~~~g~~~~~dgg 249 (252)
T PRK07035 236 -----SSYTTGECLNVDGG 249 (252)
T ss_pred -----ccCccCCEEEeCCC
Confidence 23457777776544
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00067 Score=62.89 Aligned_cols=143 Identities=16% Similarity=0.189 Sum_probs=86.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+. + -.++|++||....++. + ....|+.||+..|.+...
T Consensus 102 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~------~~~~Y~~sK~a~~~~~~~ 165 (256)
T PRK08643 102 QFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN----------P------ELAVYSSTKFAVRGLTQT 165 (256)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----------C------CCchhHHHHHHHHHHHHH
Confidence 34667889999998888887642 2 3589999998754331 1 146899999999888877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcc----eecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPF----KIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~----~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+..+. .+.|+++.+++|+.|..+.........-. ..+.... .+-.......+...+|+++++..++..
T Consensus 166 la~e~----~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~-- 237 (256)
T PRK08643 166 AARDL----ASEGITVNAYAPGIVKTPMMFDIAHQVGE--NAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGP-- 237 (256)
T ss_pred HHHHh----cccCcEEEEEeeCCCcChhhhHHHhhhcc--ccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCc--
Confidence 64321 23689999999999976532110000000 0000000 000000111356789999998887741
Q ss_pred CCCCCCCCCCCCCCceEEEeCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 238 -------~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 238 -------DSDYITGQTIIVDGGM 253 (256)
T ss_pred -------cccCccCcEEEeCCCe
Confidence 1345678888776553
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0015 Score=61.04 Aligned_cols=136 Identities=14% Similarity=0.192 Sum_probs=89.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++..+.+++.. .+..++|++||....++. . ....|+.+|+..+.+++.
T Consensus 109 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~----~~~~Y~~sKaal~~l~~~ 172 (265)
T PRK07097 109 EDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR------------E----TVSAYAAAKGGLKMLTKN 172 (265)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC------------C----CCccHHHHHHHHHHHHHH
Confidence 45667788999999988887754 466799999997643321 1 147899999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
+.... ...|+++..++|+.|..+..... .......+....+ ...+...+|++.+++.++
T Consensus 173 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~ 239 (265)
T PRK07097 173 IASEY----GEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------AARWGDPEDLAGPAVFLA 239 (265)
T ss_pred HHHHh----hhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------ccCCcCHHHHHHHHHHHh
Confidence 75321 23589999999999987743210 0011111111110 113566899999999987
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
... .....|+.+.+.+|
T Consensus 240 ~~~---------~~~~~g~~~~~~gg 256 (265)
T PRK07097 240 SDA---------SNFVNGHILYVDGG 256 (265)
T ss_pred Ccc---------cCCCCCCEEEECCC
Confidence 621 23456777776655
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0014 Score=60.81 Aligned_cols=138 Identities=12% Similarity=0.039 Sum_probs=85.9
Q ss_pred cchhhhHhhhhHHHHH----HHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHV----IEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nl----l~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++ ++.+++.+..++|++||... ++.. .. ....|+.||+..+.+++.+
T Consensus 102 ~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~-~~~~----------~~----~~~~Y~asKaa~~~~~~~l 166 (255)
T PRK06463 102 KYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAG-IGTA----------AE----GTTFYAITKAGIIILTRRL 166 (255)
T ss_pred HHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHh-CCCC----------CC----CccHhHHHHHHHHHHHHHH
Confidence 4567789999996555 44455556679999999764 3210 01 1367999999999998887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.... ...++++.+++|+.|--+-.. ...+.+........ ....+...+|++++++.++...
T Consensus 167 a~e~----~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~s~~- 232 (255)
T PRK06463 167 AFEL----GKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT---------VLKTTGKPEDIANIVLFLASDD- 232 (255)
T ss_pred HHHh----hhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC---------CcCCCcCHHHHHHHHHHHcChh-
Confidence 5311 235899999999987433110 00111222222111 1123567899999999887510
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 233 --------~~~~~G~~~~~dgg~~ 248 (255)
T PRK06463 233 --------ARYITGQVIVADGGRI 248 (255)
T ss_pred --------hcCCCCCEEEECCCee
Confidence 2345688888876653
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00068 Score=62.64 Aligned_cols=140 Identities=17% Similarity=0.115 Sum_probs=85.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++..+++++.+ .+ -+++|++||..+++|.. ....|+.+|+..|.+++
T Consensus 99 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------------~~~~Y~~sK~a~~~~~~ 162 (254)
T TIGR02415 99 EELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP----------------ILSAYSSTKFAVRGLTQ 162 (254)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC----------------CCcchHHHHHHHHHHHH
Confidence 34567789999999888877754 23 25899999977544311 14789999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecC-------CCccccceeHHHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE-------PSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~-------~~~~~~~v~vdDla~a~~~a~ 154 (389)
....+. ...++.+.+++|+.+..+.... +........... .++ ......+...+|+++++..++
T Consensus 163 ~l~~~~----~~~~i~v~~v~Pg~i~t~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 233 (254)
T TIGR02415 163 TAAQEL----APKGITVNAYCPGIVKTPMWEE----IDEETSEIAGKP-IGEGFEEFSSEIALGRPSEPEDVAGLVSFLA 233 (254)
T ss_pred HHHHHh----cccCeEEEEEecCcccChhhhh----hhhhhhhcccCc-hHHHHHHHHhhCCCCCCCCHHHHHHHHHhhc
Confidence 764321 2257999999999886553211 111100000000 000 001123688899999999888
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
... .....|+.+.+.+|
T Consensus 234 ~~~---------~~~~~g~~~~~d~g 250 (254)
T TIGR02415 234 SED---------SDYITGQSILVDGG 250 (254)
T ss_pred ccc---------cCCccCcEEEecCC
Confidence 621 22345766655544
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0009 Score=62.74 Aligned_cols=110 Identities=14% Similarity=0.089 Sum_probs=74.5
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+++. +.+..++|++||.....+ .+ . ...|+.||+..+.+....
T Consensus 101 ~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~--~----~~~Y~asKaa~~~~~~~l 164 (273)
T PRK07825 101 VTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP----------VP--G----MATYCASKHAVVGFTDAA 164 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC----------CC--C----CcchHHHHHHHHHHHHHH
Confidence 356678999999888777664 567789999999874211 11 1 478999999888766554
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... + +..|+++++++|+.+-.+-.. +. .......++..+|+|++++.++.
T Consensus 165 ~~e-l---~~~gi~v~~v~Pg~v~t~~~~------------~~------~~~~~~~~~~~~~va~~~~~~l~ 214 (273)
T PRK07825 165 RLE-L---RGTGVHVSVVLPSFVNTELIA------------GT------GGAKGFKNVEPEDVAAAIVGTVA 214 (273)
T ss_pred HHH-h---hccCcEEEEEeCCcCcchhhc------------cc------ccccCCCCCCHHHHHHHHHHHHh
Confidence 321 0 236899999999887433111 00 00112347899999999999986
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0021 Score=59.72 Aligned_cols=136 Identities=13% Similarity=0.057 Sum_probs=87.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.. .+..++|++||...... +.. ....|+.+|...|.++..+
T Consensus 105 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~----~~~~Y~~sK~a~~~~~~~l 169 (263)
T PRK08226 105 DRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-----------ADP----GETAYALTKAAIVGLTKSL 169 (263)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-----------CCC----CcchHHHHHHHHHHHHHHH
Confidence 3455788999999999998764 35668999999653110 111 1468999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC--------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER--------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... .+.++++..++|+.+.++-... .....+..+..+.+ ...+...+|+++++..++.
T Consensus 170 a~~~----~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~va~~~~~l~~ 236 (263)
T PRK08226 170 AVEY----AQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP---------LRRLADPLEVGELAAFLAS 236 (263)
T ss_pred HHHh----cccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC---------CCCCCCHHHHHHHHHHHcC
Confidence 5321 2357999999999998762211 11123333332221 1235678999999877764
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
. ......|+.+.+.+|
T Consensus 237 ~---------~~~~~~g~~i~~dgg 252 (263)
T PRK08226 237 D---------ESSYLTGTQNVIDGG 252 (263)
T ss_pred c---------hhcCCcCceEeECCC
Confidence 1 133556777766555
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.002 Score=61.61 Aligned_cols=96 Identities=20% Similarity=0.072 Sum_probs=61.2
Q ss_pred CcchhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceec-CCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVF-GGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvy-g~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.| +.++++.+++.+.+|+|++||..... +.......+++.++.+ ...|+.||...+.+..
T Consensus 115 ~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~SK~a~~~~~~ 190 (306)
T PRK06197 115 DGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNR----VAAYGQSKLANLLFTY 190 (306)
T ss_pred CCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCc----HHHHHHHHHHHHHHHH
Confidence 3556778999999 77777777777778999999986422 2211111111222222 5789999999998888
Q ss_pred HhCCCCCCCCCCCCceE--EEEecCceecCC
Q 016468 82 KSNGRPFKKNNRKCLYT--CAVRPAAIYGPG 110 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~--~ilRp~~IyGp~ 110 (389)
.+..+. ...++++ +.+.||.|..+-
T Consensus 191 ~la~~l----~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 191 ELQRRL----AAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred HHHHHh----hcCCCCeEEEEeCCCcccCcc
Confidence 765321 1134444 455899886553
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0018 Score=60.22 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=78.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.+ .+..++|++||...++|.. ....|+.||+..|.+...
T Consensus 99 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------------~~~~Y~~sKaa~~~~~~~ 162 (260)
T PRK08267 99 EAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP----------------GLAVYSATKFAVRGLTEA 162 (260)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC----------------CchhhHHHHHHHHHHHHH
Confidence 34677899999999999999854 4567899999987655421 146899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHH-HHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIV-SLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li-~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...+. ...++++.+++|+.+-.+.......... ..... ..-.+..+|++++++.+++
T Consensus 163 l~~~~----~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~------------~~~~~~~~~va~~~~~~~~ 220 (260)
T PRK08267 163 LDLEW----RRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKR------------LGVRLTPEDVAEAVWAAVQ 220 (260)
T ss_pred HHHHh----cccCcEEEEEecCCcCCcccccccchhhhhhHhh------------ccCCCCHHHHHHHHHHHHh
Confidence 65321 2358999999999886542221000000 00000 0112557999999999986
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0012 Score=61.39 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=88.1
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++. +.+..++|++||..+ +.+. + ....|+.+|+..|.+++.+
T Consensus 114 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~------~~~~Y~asK~a~~~~~~~l 177 (258)
T PRK06935 114 DWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLS-FQGG---------K------FVPAYTASKHGVAGLTKAF 177 (258)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHh-ccCC---------C------CchhhHHHHHHHHHHHHHH
Confidence 556788999999888887765 445679999999874 2211 1 1358999999999998887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... .+.|+++.+++|+.|..+...... ......+.... ....+...+|++.++..++..
T Consensus 178 a~e~----~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~----- 239 (258)
T PRK06935 178 ANEL----AAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRI---------PAGRWGEPDDLMGAAVFLASR----- 239 (258)
T ss_pred HHHh----hhhCeEEEEEEeccccccchhhcccChHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCh-----
Confidence 5321 236899999999998766322110 11111111111 112367789999999877641
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+++.+.+|.
T Consensus 240 ----~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 240 ----ASDYVNGHILAVDGGW 255 (258)
T ss_pred ----hhcCCCCCEEEECCCe
Confidence 1334578888776653
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0027 Score=59.28 Aligned_cols=135 Identities=11% Similarity=0.042 Sum_probs=87.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++.+++.. .+.+++|++||....++ ..+ ...|+.||+..|.+++
T Consensus 109 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~ 172 (263)
T PRK07814 109 KDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA------------GRG----FAAYGTAKAALAHYTR 172 (263)
T ss_pred HHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC------------CCC----CchhHHHHHHHHHHHH
Confidence 35677889999999999999974 45678999999754221 111 5789999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
....+. ..++++..++|+.+..+..... -..+...+.... ........+|++++++.++...
T Consensus 173 ~~~~e~-----~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~~~~-- 236 (263)
T PRK07814 173 LAALDL-----CPRIRVNAIAPGSILTSALEVVAANDELRAPMEKAT---------PLRRLGDPEDIAAAAVYLASPA-- 236 (263)
T ss_pred HHHHHH-----CCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcc--
Confidence 775321 1358999999998865422110 112222222111 1122467899999999987521
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.++
T Consensus 237 -------~~~~~g~~~~~~~~ 250 (263)
T PRK07814 237 -------GSYLTGKTLEVDGG 250 (263)
T ss_pred -------ccCcCCCEEEECCC
Confidence 23456777766554
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0016 Score=60.25 Aligned_cols=135 Identities=16% Similarity=0.079 Sum_probs=85.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C--------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G--------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV 75 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g--------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~ 75 (389)
+.+..+++|+.++.++++++... . ..++|++||... +.+ ..+ ...|+.+|..
T Consensus 109 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~a 172 (258)
T PRK06949 109 DFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG-LRV-----------LPQ----IGLYCMSKAA 172 (258)
T ss_pred HHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc-cCC-----------CCC----ccHHHHHHHH
Confidence 46677899999999999988632 1 358999999764 211 111 4789999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 76 AEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 76 aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
.|.++..+.... ...++++++++|+.|+++...... ......+..-.+ ...+...+|+++++..++
T Consensus 173 ~~~~~~~la~~~----~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~~~~~~~~l~ 239 (258)
T PRK06949 173 VVHMTRAMALEW----GRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLP---------RKRVGKPEDLDGLLLLLA 239 (258)
T ss_pred HHHHHHHHHHHH----HhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHh
Confidence 999988764311 125799999999999988543221 111111111111 113455799999998887
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
... .....|+.+.+.+|
T Consensus 240 ~~~---------~~~~~G~~i~~dgg 256 (258)
T PRK06949 240 ADE---------SQFINGAIISADDG 256 (258)
T ss_pred Chh---------hcCCCCcEEEeCCC
Confidence 511 23456766655443
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00055 Score=64.02 Aligned_cols=84 Identities=19% Similarity=0.134 Sum_probs=63.4
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++ ++.+.+++|++||... +.+ .| ....|+.||+..|.++...
T Consensus 96 ~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~---------~~------~~~~Y~~sK~a~~~~~~~l 159 (270)
T PRK06179 96 QAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLG-FLP---------AP------YMALYAASKHAVEGYSESL 159 (270)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccc-cCC---------CC------CccHHHHHHHHHHHHHHHH
Confidence 45778899999999999885 5678889999999764 211 11 1468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGE 111 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~ 111 (389)
... -++.|+++++++|+.+.++..
T Consensus 160 ~~e----l~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 160 DHE----VRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHH----HhhhCcEEEEEeCCCcccccc
Confidence 421 023689999999999987643
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0045 Score=57.66 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=86.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++.. .+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+
T Consensus 95 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sKaal~~~~~~l 158 (258)
T PRK06398 95 EWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS-FAV-----------TRN----AAAYVTSKHAVLGLTRSI 158 (258)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchh-ccC-----------CCC----CchhhhhHHHHHHHHHHH
Confidence 4556789999999999888864 45679999999874 221 111 578999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC-------HHHHH-HHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-------LPRIV-SLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-------~~~li-~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..+. . .++++.+++|+.|-.+-.... .+... +.... ++.......+...+|++++++.++.
T Consensus 159 a~e~----~-~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~eva~~~~~l~s 227 (258)
T PRK06398 159 AVDY----A-PTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEVAYVVAFLAS 227 (258)
T ss_pred HHHh----C-CCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHHHHHHHHHcC
Confidence 5321 1 238999999998854411100 00000 00000 0111111235678999999988775
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
. ......|+.+.+.+|.
T Consensus 228 ~---------~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 228 D---------LASFITGECVTVDGGL 244 (258)
T ss_pred c---------ccCCCCCcEEEECCcc
Confidence 1 1334578888776664
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0016 Score=59.94 Aligned_cols=109 Identities=15% Similarity=0.060 Sum_probs=76.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.....++|+.++.++++++.. .+.+++|++||....++ .+ ....|+.+|+..+.+....
T Consensus 99 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------~~------~~~~Y~~sK~a~~~~~~~l 162 (243)
T PRK07102 99 LALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------RA------SNYVYGSAKAALTAFLSGL 162 (243)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------CC------CCcccHHHHHHHHHHHHHH
Confidence 4456789999999999988764 46789999999754221 11 1357999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... .+.|+++.+++|+.|+++-... ... . .......+|++++++.+++
T Consensus 163 ~~el----~~~gi~v~~v~pg~v~t~~~~~------------~~~--~-----~~~~~~~~~~a~~i~~~~~ 211 (243)
T PRK07102 163 RNRL----FKSGVHVLTVKPGFVRTPMTAG------------LKL--P-----GPLTAQPEEVAKDIFRAIE 211 (243)
T ss_pred HHHh----hccCcEEEEEecCcccChhhhc------------cCC--C-----ccccCCHHHHHHHHHHHHh
Confidence 4211 2368999999999998762210 000 0 1124678999999999886
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0023 Score=59.43 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=88.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.. .+..++|++||... +.+ .+ ....|+.||+..+.+++.
T Consensus 108 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~---------~~------~~~~Y~~sKaa~~~~~~~ 171 (260)
T PRK07063 108 EDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHA-FKI---------IP------GCFPYPVAKHGLLGLTRA 171 (260)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhh-ccC---------CC------CchHHHHHHHHHHHHHHH
Confidence 35667889999999999998753 45568999999763 211 11 146799999999999888
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-----HH-HHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----PR-IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----~~-li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.... ...|+++.+++|+.|-.+-..... +. .........+ ..-+...+|++.+++.++..
T Consensus 172 la~el----~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~va~~~~fl~s~ 238 (260)
T PRK07063 172 LGIEY----AARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP---------MKRIGRPEEVAMTAVFLASD 238 (260)
T ss_pred HHHHh----CccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCc
Confidence 75321 236899999999988544211100 00 1111111111 11245689999999988751
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
......|+.+.+.+|..+
T Consensus 239 ---------~~~~itG~~i~vdgg~~~ 256 (260)
T PRK07063 239 ---------EAPFINATCITIDGGRSV 256 (260)
T ss_pred ---------cccccCCcEEEECCCeee
Confidence 134567888877766543
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0035 Score=57.90 Aligned_cols=136 Identities=19% Similarity=0.163 Sum_probs=87.6
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++. +.+..++|++||..+ +.+. .. ...|+.||+..|.+.+.+
T Consensus 108 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~-~~~~-----------~~----~~~Y~~sKaa~~~~~~~l 171 (253)
T PRK06172 108 EFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAG-LGAA-----------PK----MSIYAASKHAVIGLTKSA 171 (253)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhh-ccCC-----------CC----CchhHHHHHHHHHHHHHH
Confidence 456678899999987776654 455678999999874 3221 11 478999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.... ...++++.++.|+.|-.+..... .+..........+ ...+...+|+++.+..++...
T Consensus 172 a~e~----~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~p~~ia~~~~~l~~~~--- 235 (253)
T PRK06172 172 AIEY----AKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP---------VGRIGKVEEVASAVLYLCSDG--- 235 (253)
T ss_pred HHHh----cccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC---------CCCccCHHHHHHHHHHHhCcc---
Confidence 5321 23589999999998854432211 1112122211111 112467899999998887521
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 236 ------~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 236 ------ASFTTGHALMVDGGA 250 (253)
T ss_pred ------ccCcCCcEEEECCCc
Confidence 335678888887764
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0023 Score=58.63 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=76.7
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.++.++++++. +.+.+++|++||..+ +++. .+ ...|+.||...+.+.+..
T Consensus 106 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~-----------~~----~~~Y~~sK~~~~~~~~~~ 169 (241)
T PRK07454 106 DWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAA-RNAF-----------PQ----WGAYCVSKAALAAFTKCL 169 (241)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHh-CcCC-----------CC----ccHHHHHHHHHHHHHHHH
Confidence 456778899999988887774 455678999999873 4321 11 478999999999888765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++.++||+.+-.+..... ...... ....++..+|+|++++.++.
T Consensus 170 a~e~----~~~gi~v~~i~pg~i~t~~~~~~-----------~~~~~~----~~~~~~~~~~va~~~~~l~~ 222 (241)
T PRK07454 170 AEEE----RSHGIRVCTITLGAVNTPLWDTE-----------TVQADF----DRSAMLSPEQVAQTILHLAQ 222 (241)
T ss_pred HHHh----hhhCCEEEEEecCcccCCccccc-----------cccccc----ccccCCCHHHHHHHHHHHHc
Confidence 3210 23589999999999866532110 000000 01135789999999999986
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0033 Score=57.60 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=76.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++.+ .+..++|++||.... .+.. +...|+.||+..|.++..+
T Consensus 111 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~----~~~~Y~~sKaa~~~~~~~l 174 (239)
T PRK08703 111 EWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE------------TPKA----YWGGFGASKAALNYLCKVA 174 (239)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc------------cCCC----CccchHHhHHHHHHHHHHH
Confidence 3445789999999999988855 345689999986531 1111 1468999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ....++++.+++|+.|++|...+.. .+ .....+...+|++.++...+.
T Consensus 175 a~e~---~~~~~i~v~~v~pG~v~t~~~~~~~---------------~~--~~~~~~~~~~~~~~~~~~~~~ 226 (239)
T PRK08703 175 ADEW---ERFGNLRANVLVPGPINSPQRIKSH---------------PG--EAKSERKSYGDVLPAFVWWAS 226 (239)
T ss_pred HHHh---ccCCCeEEEEEecCcccCccccccC---------------CC--CCccccCCHHHHHHHHHHHhC
Confidence 5321 0113699999999999987432110 01 111235688999999988875
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0041 Score=57.54 Aligned_cols=137 Identities=13% Similarity=0.116 Sum_probs=85.6
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++ ++.+-.++|++||... +.. +.. ....|+.||+..+.++..+
T Consensus 107 ~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~-~~~----------~~~----~~~~Y~~sK~a~~~~~~~l 171 (254)
T PRK07478 107 GWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVG-HTA----------GFP----GMAAYAASKAGLIGLTQVL 171 (254)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHh-hcc----------CCC----CcchhHHHHHHHHHHHHHH
Confidence 45778999998877765554 4556678999999763 210 111 1478999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..+. ...|+++.+++|+.|-.+-.... .+.....+.... ....+...+|++++++.++...
T Consensus 172 a~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l~s~~---- 234 (254)
T PRK07478 172 AAEY----GAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLH---------ALKRMAQPEEIAQAALFLASDA---- 234 (254)
T ss_pred HHHH----hhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCch----
Confidence 5321 23579999999999865521110 111111111111 1123567899999998877521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 235 -----~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 235 -----ASFVTGTALLVDGGV 249 (254)
T ss_pred -----hcCCCCCeEEeCCch
Confidence 234568888776553
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0026 Score=58.62 Aligned_cols=120 Identities=11% Similarity=0.051 Sum_probs=73.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----c-CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----F-GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~-gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+....+++|+.++.++++++.. . +.+++|++||..+ + .+..+ ...|+.+|+..|.+++.
T Consensus 104 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~-----------~~~~~----~~~Y~~sKaa~~~~~~~ 167 (251)
T PRK06924 104 ELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA-K-----------NPYFG----WSAYCSSKAGLDMFTQT 167 (251)
T ss_pred HHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh-c-----------CCCCC----cHHHhHHHHHHHHHHHH
Confidence 4556788899987666665543 3 3468999999763 1 12222 57899999999999987
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+..... .+..++++..++|+.+-.+.... .... .+..... . +. .-+...+|++++++.++.
T Consensus 168 la~e~~--~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~-----~--~~--~~~~~~~dva~~~~~l~~ 235 (251)
T PRK06924 168 VATEQE--EEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTN-LDRFITL-----K--EE--GKLLSPEYVAKALRNLLE 235 (251)
T ss_pred HHHHhh--hcCCCeEEEEecCCccccHhHHHHHhcCcccchH-HHHHHHH-----h--hc--CCcCCHHHHHHHHHHHHh
Confidence 753210 02357999999999775432110 0000 0111100 0 00 125789999999999886
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0032 Score=57.46 Aligned_cols=130 Identities=16% Similarity=0.098 Sum_probs=82.7
Q ss_pred chhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+..+++|+.++.++++.+... .-.++|++||....++. ..+ ...|+.||...+.++......
T Consensus 103 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~----~~~Y~~sK~~~~~~~~~~~~~ 167 (238)
T PRK05786 103 LEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPD----QLSYAVAKAGLAKAVEILASE 167 (238)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCC----chHHHHHHHHHHHHHHHHHHH
Confidence 3556789999998888888764 22479999987642211 111 467999999998877765421
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
. ...+++++++||+.++++-.... . .... .. .....+..+|+++++..++...
T Consensus 168 ~----~~~gi~v~~i~pg~v~~~~~~~~--~-~~~~------~~-----~~~~~~~~~~va~~~~~~~~~~--------- 220 (238)
T PRK05786 168 L----LGRGIRVNGIAPTTISGDFEPER--N-WKKL------RK-----LGDDMAPPEDFAKVIIWLLTDE--------- 220 (238)
T ss_pred H----hhcCeEEEEEecCccCCCCCchh--h-hhhh------cc-----ccCCCCCHHHHHHHHHHHhccc---------
Confidence 0 23589999999999998743210 0 0100 00 0113567799999999988520
Q ss_pred CCCCCCceEEEeCC
Q 016468 167 RPIASGQPYFVSDG 180 (389)
Q Consensus 167 ~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.++
T Consensus 221 ~~~~~g~~~~~~~~ 234 (238)
T PRK05786 221 ADWVDGVVIPVDGG 234 (238)
T ss_pred ccCccCCEEEECCc
Confidence 22346777776544
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0038 Score=64.34 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=89.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.|+.++.+++... +-.++|++||.....+ ..+ ...|+.||+..+.+++....
T Consensus 367 ~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaal~~l~~~la~ 430 (520)
T PRK06484 367 DFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA------------LPP----RNAYCASKAAVTMLSRSLAC 430 (520)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC------------CCC----CchhHHHHHHHHHHHHHHHH
Confidence 45778999999999999998764 3358999999875221 111 47899999999999887653
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCH---HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHL---PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~---~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.. .+.|+++.++.|+.|..+...... ......+.+..+. ..+...+|++++++.++..
T Consensus 431 e~----~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dia~~~~~l~s~------ 491 (520)
T PRK06484 431 EW----APAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL---------GRLGDPEEVAEAIAFLASP------ 491 (520)
T ss_pred Hh----hhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc------
Confidence 21 236899999999999776322110 1111222221111 1246789999999888752
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 492 ---~~~~~~G~~i~vdgg 506 (520)
T PRK06484 492 ---AASYVNGATLTVDGG 506 (520)
T ss_pred ---cccCccCcEEEECCC
Confidence 133467888877665
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0061 Score=56.36 Aligned_cols=137 Identities=11% Similarity=0.036 Sum_probs=87.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+ .+ -.++|++||... + ...+ ....|+.||+..+.+.+.
T Consensus 101 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~-~---------~~~~------~~~~Y~~sKaa~~~~~~~ 164 (252)
T PRK07677 101 GWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA-W---------DAGP------GVIHSAAAKAGVLAMTRT 164 (252)
T ss_pred HHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh-c---------cCCC------CCcchHHHHHHHHHHHHH
Confidence 3467899999999999999954 22 358999998652 1 1111 136799999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-C--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-R--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... ++.|+++.+++|+.|..++.. . ..+...+.+.+..+. ..+...+|+++++..++..
T Consensus 165 la~e~~---~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~--- 229 (252)
T PRK07677 165 LAVEWG---RKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL---------GRLGTPEEIAGLAYFLLSD--- 229 (252)
T ss_pred HHHHhC---cccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHcCc---
Confidence 543210 235899999999999854321 1 112333333322211 1356789999988777641
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 230 ------~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 230 ------EAAYINGTCITMDGGQ 245 (252)
T ss_pred ------cccccCCCEEEECCCe
Confidence 1335678887776654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0045 Score=57.70 Aligned_cols=137 Identities=12% Similarity=0.056 Sum_probs=86.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHH---cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLE---FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~---~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++++++.. .+-.++|++||....++. + ....|+.+|+..+.+.+...
T Consensus 102 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~------~~~~Y~asKaa~~~~~~~la 165 (261)
T PRK08265 102 DWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ----------T------GRWLYPASKAAIRQLTRSMA 165 (261)
T ss_pred HHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC----------C------CCchhHHHHHHHHHHHHHHH
Confidence 5567889999999999998865 234589999998754321 1 13679999999998888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCH---HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHL---PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~---~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
... ...|+++.+++|+.+..+-..... .......... ..+ ...+...+|+++++..++...
T Consensus 166 ~e~----~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~------~~p--~~r~~~p~dva~~~~~l~s~~---- 229 (261)
T PRK08265 166 MDL----APDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP------FHL--LGRVGDPEEVAQVVAFLCSDA---- 229 (261)
T ss_pred HHh----cccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc------cCC--CCCccCHHHHHHHHHHHcCcc----
Confidence 211 236899999999987654211100 0000111000 001 112456899999999887511
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 230 -----~~~~tG~~i~vdgg~ 244 (261)
T PRK08265 230 -----ASFVTGADYAVDGGY 244 (261)
T ss_pred -----ccCccCcEEEECCCe
Confidence 345578888777663
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0023 Score=59.81 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=86.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.|+.++++++... .-.++|++||.....+ .. ....|+.||+..|.+++...
T Consensus 109 ~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~------------~~----~~~~Y~asK~a~~~l~~~la 172 (264)
T PRK07576 109 GFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP------------MP----MQAHVCAAKAGVDMLTRTLA 172 (264)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC------------CC----CccHHHHHHHHHHHHHHHHH
Confidence 45667889999999999998753 1258999999764211 11 14689999999999999864
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCC-CCCHH--HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGE-ERHLP--RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~-~~~~~--~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
... ...++++++++|+.+.+... ....+ ......... . ....+...+|++++++.++...
T Consensus 173 ~e~----~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~~l~~~~---- 235 (264)
T PRK07576 173 LEW----GPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--V-------PLKRNGTKQDIANAALFLASDM---- 235 (264)
T ss_pred HHh----hhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--C-------CCCCCCCHHHHHHHHHHHcChh----
Confidence 311 23579999999998875321 11111 011111111 1 1123567899999999988521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.++.
T Consensus 236 -----~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 236 -----ASYITGVVLPVDGGW 250 (264)
T ss_pred -----hcCccCCEEEECCCc
Confidence 234567777666653
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.01 Score=54.26 Aligned_cols=132 Identities=13% Similarity=0.069 Sum_probs=85.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+.+..+++|+.++..+.+++... + ..++|++||.... ...+ . ...|+.||+..|.++
T Consensus 96 ~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~----------~~~~--~----~~~Y~asKaal~~l~ 159 (236)
T PRK06483 96 DVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE----------KGSD--K----HIAYAASKAALDNMT 159 (236)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhc----------cCCC--C----CccHHHHHHHHHHHH
Confidence 356778899999998887777652 2 4589999986531 1111 1 468999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.+..+. . .++++.++.|+.+.-+... -+..........+.. -+...+|+++++..++.
T Consensus 160 ~~~a~e~----~-~~irvn~v~Pg~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~----- 218 (236)
T PRK06483 160 LSFAAKL----A-PEVKVNSIAPALILFNEGD--DAAYRQKALAKSLLK---------IEPGEEEIIDLVDYLLT----- 218 (236)
T ss_pred HHHHHHH----C-CCcEEEEEccCceecCCCC--CHHHHHHHhccCccc---------cCCCHHHHHHHHHHHhc-----
Confidence 8875321 1 2599999999987432211 122222222221111 13457999999998875
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 219 ------~~~~~G~~i~vdgg~ 233 (236)
T PRK06483 219 ------SCYVTGRSLPVDGGR 233 (236)
T ss_pred ------CCCcCCcEEEeCccc
Confidence 345678888887664
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0039 Score=57.43 Aligned_cols=112 Identities=16% Similarity=0.125 Sum_probs=76.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++. +.+.+++|++||....++ .+ ....|+.||+..|.++..
T Consensus 115 ~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------~~------~~~~Y~~sK~a~~~~~~~ 178 (247)
T PRK08945 115 EVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG----------RA------NWGAYAVSKFATEGMMQV 178 (247)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC----------CC------CCcccHHHHHHHHHHHHH
Confidence 3456778899999888888774 567889999999764221 11 146899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... +..++++++++|+.+-.+-..... ... + ...+.-.+|+++.+..++.
T Consensus 179 ~~~~~----~~~~i~~~~v~pg~v~t~~~~~~~--------~~~------~---~~~~~~~~~~~~~~~~~~~ 230 (247)
T PRK08945 179 LADEY----QGTNLRVNCINPGGTRTAMRASAF--------PGE------D---PQKLKTPEDIMPLYLYLMG 230 (247)
T ss_pred HHHHh----cccCEEEEEEecCCccCcchhhhc--------Ccc------c---ccCCCCHHHHHHHHHHHhC
Confidence 64321 336899999999987544211000 000 0 1135678999999999874
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0082 Score=55.83 Aligned_cols=134 Identities=15% Similarity=0.038 Sum_probs=87.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.. .+ -.++|++||..... +.. +...|+.||+..|.+++.
T Consensus 120 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------~~~----~~~~Y~~sKaal~~~~~~ 183 (262)
T PRK07831 120 EWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------AQH----GQAHYAAAKAGVMALTRC 183 (262)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------CCC----CCcchHHHHHHHHHHHHH
Confidence 4556788999999999988864 22 35788988865310 111 147899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++++++|+.+..|..... .......+....+. .-+...+|++++++.++...
T Consensus 184 la~e~----~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~~va~~~~~l~s~~---- 246 (262)
T PRK07831 184 SALEA----AEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAF---------GRAAEPWEVANVIAFLASDY---- 246 (262)
T ss_pred HHHHh----CccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCch----
Confidence 75321 23689999999999987743221 13333333332211 12456789999998887521
Q ss_pred CCCCCCCCCCCceEEEeC
Q 016468 162 PGQKGRPIASGQPYFVSD 179 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~ 179 (389)
..-..|+.+.+..
T Consensus 247 -----~~~itG~~i~v~~ 259 (262)
T PRK07831 247 -----SSYLTGEVVSVSS 259 (262)
T ss_pred -----hcCcCCceEEeCC
Confidence 2345677776654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0054 Score=57.36 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=85.4
Q ss_pred chhhhHhhhhHHHHHHHHHHHcC----------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 016468 9 FGRVDEVNINGTCHVIEACLEFG----------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQ 78 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~g----------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~ 78 (389)
....+++|+.++.++++++.... ..++|.+||... . .+..+ ...|+.||+..|.
T Consensus 119 ~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~----------~--~~~~~----~~~Y~asK~a~~~ 182 (267)
T TIGR02685 119 VAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMT----------D--QPLLG----FTMYTMAKHALEG 182 (267)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhc----------c--CCCcc----cchhHHHHHHHHH
Confidence 45679999999999999875432 125777776542 1 11111 5789999999999
Q ss_pred HHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 79 LVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 79 ~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+.+.+..+. ...|+++.+++|+.+..|.+.. ........... + .+ ..+...+|++++++.++..
T Consensus 183 ~~~~la~e~----~~~gi~v~~v~PG~~~~~~~~~--~~~~~~~~~~~--~-~~-----~~~~~~~~va~~~~~l~~~-- 246 (267)
T TIGR02685 183 LTRSAALEL----APLQIRVNGVAPGLSLLPDAMP--FEVQEDYRRKV--P-LG-----QREASAEQIADVVIFLVSP-- 246 (267)
T ss_pred HHHHHHHHH----hhhCeEEEEEecCCccCccccc--hhHHHHHHHhC--C-CC-----cCCCCHHHHHHHHHHHhCc--
Confidence 998875321 2368999999999987663321 12222222111 1 00 1245789999999988752
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
......|+.+.+.++..
T Consensus 247 -------~~~~~~G~~~~v~gg~~ 263 (267)
T TIGR02685 247 -------KAKYITGTCIKVDGGLS 263 (267)
T ss_pred -------ccCCcccceEEECCcee
Confidence 13345788877766643
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0046 Score=57.21 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=87.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++.+++... + -.++|++||.....+ ..+ .....|+.||+..|.+++.
T Consensus 109 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---------~~~-----~~~~~Y~asKaal~~~~~~ 174 (253)
T PRK05867 109 EFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---------NVP-----QQVSHYCASKAAVIHLTKA 174 (253)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---------CCC-----CCccchHHHHHHHHHHHHH
Confidence 45567789999999999998643 2 236999998653110 000 0136899999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|-.+-... .+..........+ ...+...+|+++++..++..
T Consensus 175 la~e~----~~~gI~vn~i~PG~v~t~~~~~-~~~~~~~~~~~~~---------~~r~~~p~~va~~~~~L~s~------ 234 (253)
T PRK05867 175 MAVEL----APHKIRVNSVSPGYILTELVEP-YTEYQPLWEPKIP---------LGRLGRPEELAGLYLYLASE------ 234 (253)
T ss_pred HHHHH----hHhCeEEEEeecCCCCCccccc-chHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCc------
Confidence 75321 2358999999999986553221 1222222221111 11356789999999888751
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 235 ---~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 235 ---ASSYMTGSDIVIDGGY 250 (253)
T ss_pred ---ccCCcCCCeEEECCCc
Confidence 1345578888776663
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.011 Score=55.08 Aligned_cols=135 Identities=14% Similarity=0.139 Sum_probs=82.0
Q ss_pred cchhhhHhhhhHHHHHHHH----HHHcCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEA----CLEFGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~a----a~~~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++.++ +.+.+. .++|++||.... .+..+ ...|+.+|+..+.+...
T Consensus 108 ~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------~~~~~----~~~Y~~sKaa~~~~~~~ 171 (261)
T PRK08936 108 DWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------IPWPL----FVHYAASKGGVKLMTET 171 (261)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------CCCCC----CcccHHHHHHHHHHHHH
Confidence 4556789998887665554 455543 589999996531 12222 57899999877776666
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
..... ...|+++++++|+.|-.+..... -+..........+ ...+...+|+++++..++..
T Consensus 172 la~e~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~---- 234 (261)
T PRK08936 172 LAMEY----APKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP---------MGYIGKPEEIAAVAAWLASS---- 234 (261)
T ss_pred HHHHH----hhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCc----
Confidence 53211 23589999999999987743221 1222222221111 12356789999998887752
Q ss_pred CCCCCCCCCCCCceEEEeCC
Q 016468 161 IPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.++
T Consensus 235 -----~~~~~~G~~i~~d~g 249 (261)
T PRK08936 235 -----EASYVTGITLFADGG 249 (261)
T ss_pred -----ccCCccCcEEEECCC
Confidence 133456766666544
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0052 Score=54.70 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=74.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++.+++... +-.+++++||.... .+... ...|+.||+..+.+.+....
T Consensus 78 ~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~------------~~~~~----~~~Y~~sK~a~~~~~~~la~ 141 (199)
T PRK07578 78 DFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD------------EPIPG----GASAATVNGALEGFVKAAAL 141 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC------------CCCCC----chHHHHHHHHHHHHHHHHHH
Confidence 45667889999999999998763 33579999986531 11111 46899999999998887753
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+. +.|+++..+.|+.+-.+ ... .+... .+ ..++..+|+++++..+++
T Consensus 142 e~-----~~gi~v~~i~Pg~v~t~-----~~~------~~~~~--~~-----~~~~~~~~~a~~~~~~~~ 188 (199)
T PRK07578 142 EL-----PRGIRINVVSPTVLTES-----LEK------YGPFF--PG-----FEPVPAARVALAYVRSVE 188 (199)
T ss_pred Hc-----cCCeEEEEEcCCcccCc-----hhh------hhhcC--CC-----CCCCCHHHHHHHHHHHhc
Confidence 21 25799999999877321 110 01101 11 235789999999998885
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0045 Score=57.55 Aligned_cols=105 Identities=12% Similarity=0.094 Sum_probs=71.6
Q ss_pred hhhHhhhhHHHH----HHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 11 RVDEVNINGTCH----VIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 11 ~~~~vNv~gt~n----ll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
..+++|+.++.+ +++.+++.+..++|++||.... . ..+ + ...|+.||+..+.+.......
T Consensus 113 ~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~-~---------~~~--~----~~~Y~~sKaa~~~~~~~l~~e 176 (253)
T PRK07904 113 QIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGE-R---------VRR--S----NFVYGSTKAGLDGFYLGLGEA 176 (253)
T ss_pred HHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhc-C---------CCC--C----CcchHHHHHHHHHHHHHHHHH
Confidence 468999988776 6777777888899999997531 1 011 1 467999999988665554211
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+ +..++++++++|+.+.-+-... ... . ...+..+|+|+.++.+++
T Consensus 177 -l---~~~~i~v~~v~Pg~v~t~~~~~-----------~~~------~---~~~~~~~~~A~~i~~~~~ 221 (253)
T PRK07904 177 -L---REYGVRVLVVRPGQVRTRMSAH-----------AKE------A---PLTVDKEDVAKLAVTAVA 221 (253)
T ss_pred -H---hhcCCEEEEEeeCceecchhcc-----------CCC------C---CCCCCHHHHHHHHHHHHH
Confidence 0 2368999999999997541110 000 0 113678999999999986
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0036 Score=58.34 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=85.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++... +-.++|++||.....+. + ....|+.||+..|.+++.+
T Consensus 109 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------~~~~Y~~sK~a~~~l~~~l 172 (266)
T PRK06171 109 AFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS----------E------GQSCYAATKAALNSFTRSW 172 (266)
T ss_pred HHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------C------CCchhHHHHHHHHHHHHHH
Confidence 44668899999999999998753 34589999998742211 1 1478999999999998877
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCC-CCCH------------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGE-ERHL------------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~-~~~~------------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
.... ...|+++.+++|+.+--.+- .... ..+.......... ....+...+|++.++
T Consensus 173 a~e~----~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~~~~eva~~~ 241 (266)
T PRK06171 173 AKEL----GKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTI-------PLGRSGKLSEVADLV 241 (266)
T ss_pred HHHh----hhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccc-------cCCCCCCHHHhhhhe
Confidence 5321 23689999999998742111 1000 1111111110000 112356779999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
..++.. ......|+.+.+.+|
T Consensus 242 ~fl~s~---------~~~~itG~~i~vdgg 262 (266)
T PRK06171 242 CYLLSD---------RASYITGVTTNIAGG 262 (266)
T ss_pred eeeecc---------ccccceeeEEEecCc
Confidence 887641 033456888777655
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0054 Score=57.33 Aligned_cols=141 Identities=9% Similarity=0.007 Sum_probs=87.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++..+.+++ ++.+..++|++||..+ +.+ .+ ....|+.+|+..+.+.+.
T Consensus 107 ~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~-~~~---------~~------~~~~y~asKaal~~l~~~ 170 (263)
T PRK08339 107 EDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI-KEP---------IP------NIALSNVVRISMAGLVRT 170 (263)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc-cCC---------CC------cchhhHHHHHHHHHHHHH
Confidence 456677889988766665555 4556679999999874 211 11 136799999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC-----------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-----------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-----------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
..... .+.|+++.++.|+.|-.+..... .+.....+.+. .....+...+|++.++.
T Consensus 171 la~el----~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dva~~v~ 237 (263)
T PRK08339 171 LAKEL----GPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP---------IPLGRLGEPEEIGYLVA 237 (263)
T ss_pred HHHHh----cccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc---------CCcccCcCHHHHHHHHH
Confidence 65321 34689999999998854311000 01111111111 01123567899999998
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCCh
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.++.. ......|+.+.+.+|..++.
T Consensus 238 fL~s~---------~~~~itG~~~~vdgG~~~~~ 262 (263)
T PRK08339 238 FLASD---------LGSYINGAMIPVDGGRLNSV 262 (263)
T ss_pred HHhcc---------hhcCccCceEEECCCccccC
Confidence 87741 13356788888877765553
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0017 Score=60.90 Aligned_cols=83 Identities=19% Similarity=0.114 Sum_probs=60.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH---cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE---FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~---~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||...+++. + ....|+.||...|.+...+
T Consensus 94 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------~~~~Y~~sK~al~~~~~~l 157 (274)
T PRK05693 94 EAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT----------P------FAGAYCASKAAVHALSDAL 157 (274)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC----------C------CccHHHHHHHHHHHHHHHH
Confidence 34567789999999999998854 244689999997643221 1 1468999999999887765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
.... .+.|+++++++|+.|..+
T Consensus 158 ~~e~----~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 158 RLEL----APFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHh----hhhCeEEEEEecCccccc
Confidence 4210 236899999999999765
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.013 Score=54.51 Aligned_cols=132 Identities=11% Similarity=-0.005 Sum_probs=82.5
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++..+.+++. +.+-.++|++||.... .+..+ ...|+.||+..+.+.+..
T Consensus 119 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~----~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK12859 119 ELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ------------GPMVG----ELAYAATKGAIDALTSSL 182 (256)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC------------CCCCC----chHHHHHHHHHHHHHHHH
Confidence 456678999999888865553 3334589999997631 11111 578999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...+++++.++|+.+-.+... ......+....+ ...+...+|+++++..++...
T Consensus 183 a~~~----~~~~i~v~~v~PG~i~t~~~~---~~~~~~~~~~~~---------~~~~~~~~d~a~~~~~l~s~~------ 240 (256)
T PRK12859 183 AAEV----AHLGITVNAINPGPTDTGWMT---EEIKQGLLPMFP---------FGRIGEPKDAARLIKFLASEE------ 240 (256)
T ss_pred HHHh----hhhCeEEEEEEEccccCCCCC---HHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcc------
Confidence 5321 236799999999988544211 112111221111 112456799999998876410
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 241 ---~~~~~G~~i~~dgg 254 (256)
T PRK12859 241 ---AEWITGQIIHSEGG 254 (256)
T ss_pred ---ccCccCcEEEeCCC
Confidence 23456777665544
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0063 Score=57.10 Aligned_cols=139 Identities=12% Similarity=0.140 Sum_probs=84.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++..+++++.. .+ .++|++||.....+ .+ ....|+.||+..+.+++.+
T Consensus 106 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~----------~~------~~~~Y~asKaal~~l~~~l 168 (272)
T PRK08589 106 VFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAA----------DL------YRSGYNAAKGAVINFTKSI 168 (272)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCC----------CC------CCchHHHHHHHHHHHHHHH
Confidence 3466778999998777777643 34 58999999774211 11 1468999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH---H-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL---P-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~---~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.... ...|+++.++.|+.|..+-..... . .+........ ... .+ ...+...+|+++++..++...
T Consensus 169 a~e~----~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~--~~--~~~~~~~~~va~~~~~l~s~~-- 237 (272)
T PRK08589 169 AIEY----GRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQ-KWM--TP--LGRLGKPEEVAKLVVFLASDD-- 237 (272)
T ss_pred HHHh----hhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhh-hcc--CC--CCCCcCHHHHHHHHHHHcCch--
Confidence 5321 236899999999998755322110 0 0000111000 000 01 112567899999998877521
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 238 -------~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 238 -------SSFITGETIRIDGGV 252 (272)
T ss_pred -------hcCcCCCEEEECCCc
Confidence 334578887776654
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0063 Score=59.17 Aligned_cols=118 Identities=18% Similarity=0.175 Sum_probs=73.3
Q ss_pred cchhhhHhhhhHHHHHH----HHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVI----EACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll----~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++. +.+++.+..++|++||... +.+ .| ....|+.||+..+.+....
T Consensus 108 ~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~-~~~---------~~------~~~~Y~asK~a~~~~~~~l 171 (334)
T PRK07109 108 EFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA-YRS---------IP------LQSAYCAAKHAIRGFTDSL 171 (334)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh-ccC---------CC------cchHHHHHHHHHHHHHHHH
Confidence 44567788877766544 4445556678999999874 321 11 1468999999988877665
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... .. .+.++.+++++|+.|-.|... ....... ........+...+|+|++++.+++
T Consensus 172 ~~el-~~-~~~~I~v~~v~Pg~v~T~~~~--------~~~~~~~----~~~~~~~~~~~pe~vA~~i~~~~~ 229 (334)
T PRK07109 172 RCEL-LH-DGSPVSVTMVQPPAVNTPQFD--------WARSRLP----VEPQPVPPIYQPEVVADAILYAAE 229 (334)
T ss_pred HHHH-hh-cCCCeEEEEEeCCCccCchhh--------hhhhhcc----ccccCCCCCCCHHHHHHHHHHHHh
Confidence 3211 00 125799999999998655221 1111000 001111235689999999999986
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.01 Score=54.96 Aligned_cols=136 Identities=15% Similarity=0.155 Sum_probs=86.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++++++... + -.++|++||..+ +.+. +. ...|+.||+..|.+.+
T Consensus 107 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~~------~~~Y~~sKaa~~~~~~ 170 (253)
T PRK08993 107 KDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS-FQGG---------IR------VPSYTASKSGVMGVTR 170 (253)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh-ccCC---------CC------CcchHHHHHHHHHHHH
Confidence 457788999999999999988653 2 247999999874 3211 11 3589999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
....+. .+.|+++.+++|+.+--+-..... ......+.... + . .-+.-.+|++.+++.++...
T Consensus 171 ~la~e~----~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~--p-----~--~r~~~p~eva~~~~~l~s~~-- 235 (253)
T PRK08993 171 LMANEW----AKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRI--P-----A--GRWGLPSDLMGPVVFLASSA-- 235 (253)
T ss_pred HHHHHh----hhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcC--C-----C--CCCcCHHHHHHHHHHHhCcc--
Confidence 765321 235899999999998654221100 01111111111 1 1 12566899999998887521
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.+|
T Consensus 236 -------~~~~~G~~~~~dgg 249 (253)
T PRK08993 236 -------SDYINGYTIAVDGG 249 (253)
T ss_pred -------ccCccCcEEEECCC
Confidence 33456777766444
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0074 Score=55.93 Aligned_cols=136 Identities=18% Similarity=0.172 Sum_probs=86.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++.+++... + -.++|++||... +.+. +. ...|+.||+..+.+++
T Consensus 105 ~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~-~~~~---------~~------~~~Y~asK~a~~~l~~ 168 (251)
T PRK12481 105 KDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS-FQGG---------IR------VPSYTASKSAVMGLTR 168 (251)
T ss_pred HHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh-cCCC---------CC------CcchHHHHHHHHHHHH
Confidence 456778899999999998887542 2 358999999874 2211 11 3579999999999888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... .+.|+++.+++|+.|-.+..... .......+.... +. ..+...+|+++++..++..
T Consensus 169 ~la~e~----~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-------p~--~~~~~peeva~~~~~L~s~--- 232 (251)
T PRK12481 169 ALATEL----SQYNINVNAIAPGYMATDNTAALRADTARNEAILERI-------PA--SRWGTPDDLAGPAIFLSSS--- 232 (251)
T ss_pred HHHHHH----hhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcC-------CC--CCCcCHHHHHHHHHHHhCc---
Confidence 765321 23689999999998854421110 011111111111 11 1256789999999888751
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 233 ------~~~~~~G~~i~vdgg 247 (251)
T PRK12481 233 ------ASDYVTGYTLAVDGG 247 (251)
T ss_pred ------cccCcCCceEEECCC
Confidence 134567887776555
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0027 Score=54.49 Aligned_cols=76 Identities=16% Similarity=0.225 Sum_probs=60.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+..+++|+.++.++++++.+.+.+++|++||..++++.. ....|+.+|...+.++....
T Consensus 103 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~----------------~~~~y~~sk~~~~~~~~~~~-- 164 (180)
T smart00822 103 ERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP----------------GQANYAAANAFLDALAAHRR-- 164 (180)
T ss_pred HHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC----------------CchhhHHHHHHHHHHHHHHH--
Confidence 345677999999999999999888888999999987644320 14689999999999997653
Q ss_pred CCCCCCCCCceEEEEecCce
Q 016468 87 PFKKNNRKCLYTCAVRPAAI 106 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~I 106 (389)
..+++++++.|+.+
T Consensus 165 ------~~~~~~~~~~~g~~ 178 (180)
T smart00822 165 ------ARGLPATSINWGAW 178 (180)
T ss_pred ------hcCCceEEEeeccc
Confidence 26788899988765
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0067 Score=61.38 Aligned_cols=137 Identities=18% Similarity=0.079 Sum_probs=84.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC----CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI----QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv----krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++..... .++|++||...+++. + ....|+.+|...+.++..
T Consensus 306 ~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~----------~------~~~~Y~asKaal~~~~~~ 369 (450)
T PRK08261 306 ARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN----------R------GQTNYAASKAGVIGLVQA 369 (450)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------C------CChHHHHHHHHHHHHHHH
Confidence 34567889999999999999987433 689999998753331 0 147899999987777766
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... +..++.+.++.|+.|--+-. ...+.......... . .....--.+|+++++..++..
T Consensus 370 la~el----~~~gi~v~~v~PG~i~t~~~-~~~~~~~~~~~~~~--~------~l~~~~~p~dva~~~~~l~s~------ 430 (450)
T PRK08261 370 LAPLL----AERGITINAVAPGFIETQMT-AAIPFATREAGRRM--N------SLQQGGLPVDVAETIAWLASP------ 430 (450)
T ss_pred HHHHH----hhhCcEEEEEEeCcCcchhh-hccchhHHHHHhhc--C------CcCCCCCHHHHHHHHHHHhCh------
Confidence 54211 23689999999998742211 11111111111111 0 011123356999999887641
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.++++.
T Consensus 431 ---~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 431 ---ASGGVTGNVVRVCGQS 446 (450)
T ss_pred ---hhcCCCCCEEEECCCc
Confidence 1334578888776543
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0098 Score=56.64 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=75.0
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++. +.+..++|++||.++ ++ +..|. ...|+.||+..+.++...
T Consensus 142 ~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~--------~~~p~------~~~Y~asKaal~~l~~~l 206 (293)
T PRK05866 142 DVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGV-LS--------EASPL------FSVYNASKAALSAVSRVI 206 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh-cC--------CCCCC------cchHHHHHHHHHHHHHHH
Confidence 345688999999888888764 567789999999763 32 11111 468999999999888776
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... .+.++++++++|+.|=.+.... .. . ..+ ...+..+++|+.++.+++
T Consensus 207 a~e~----~~~gI~v~~v~pg~v~T~~~~~-----------~~--~--~~~---~~~~~pe~vA~~~~~~~~ 256 (293)
T PRK05866 207 ETEW----GDRGVHSTTLYYPLVATPMIAP-----------TK--A--YDG---LPALTADEAAEWMVTAAR 256 (293)
T ss_pred HHHh----cccCcEEEEEEcCcccCccccc-----------cc--c--ccC---CCCCCHHHHHHHHHHHHh
Confidence 4211 2368999999998774432110 00 0 000 123678999999999987
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.034 Score=50.34 Aligned_cols=105 Identities=13% Similarity=0.040 Sum_probs=75.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+...++|+.++.++++++... +-.++|++||...+++.. +..+ ...|+.+|...|.++..+.
T Consensus 95 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~----~~~Y~~sK~a~~~~~~~~~ 161 (222)
T PRK06953 95 DFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA---------TGTT----GWLYRASKAALNDALRAAS 161 (222)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc---------cCCC----ccccHHhHHHHHHHHHHHh
Confidence 46778999999999999999752 224799999876545421 1111 2469999999999999876
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+ ..++++..++|+.+.-+-.. + ...+..+|.++.+..++.
T Consensus 162 ~~------~~~i~v~~v~Pg~i~t~~~~--------------------~----~~~~~~~~~~~~~~~~~~ 202 (222)
T PRK06953 162 LQ------ARHATCIALHPGWVRTDMGG--------------------A----QAALDPAQSVAGMRRVIA 202 (222)
T ss_pred hh------ccCcEEEEECCCeeecCCCC--------------------C----CCCCCHHHHHHHHHHHHH
Confidence 42 24689999999988654211 0 113577889999988876
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.016 Score=54.34 Aligned_cols=119 Identities=21% Similarity=0.127 Sum_probs=76.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+...++|+.++.++++++.. ....++|++||.....+ .+ ....|+.||+..+.+..
T Consensus 100 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~----------~~------~~~~Y~~sK~a~~~~~~ 163 (272)
T PRK07832 100 EQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA----------LP------WHAAYSASKFGLRGLSE 163 (272)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----------CC------CCcchHHHHHHHHHHHH
Confidence 34567899999999999999753 22458999999763211 11 14679999997777666
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
..... + ...++++++++|+.+.++...... ......... ......+..+|+|.+++.++
T Consensus 164 ~l~~e-~---~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~vA~~~~~~~ 229 (272)
T PRK07832 164 VLRFD-L---ARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRGHAVTPEKAAEKILAGV 229 (272)
T ss_pred HHHHH-h---hhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hcccCCCCHHHHHHHHHHHH
Confidence 54321 0 236899999999999876432110 000000000 00113478999999999998
Q ss_pred h
Q 016468 155 M 155 (389)
Q Consensus 155 ~ 155 (389)
+
T Consensus 230 ~ 230 (272)
T PRK07832 230 E 230 (272)
T ss_pred h
Confidence 6
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0063 Score=58.52 Aligned_cols=97 Identities=16% Similarity=0.085 Sum_probs=66.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH---cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE---FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~---~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+..+.+.+.. .+-.|+|++||....++.....+.+++.++.+ ...|+.||...+.+..++
T Consensus 114 ~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~----~~~Y~~SK~a~~~~~~~l 189 (313)
T PRK05854 114 DGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAG----MRAYSQSKIAVGLFALEL 189 (313)
T ss_pred ccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcc----hhhhHHHHHHHHHHHHHH
Confidence 46677899999998888877763 23458999999875444322222233333333 578999999999998877
Q ss_pred CCCCCCCCCCCCceEEEEecCceecC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
..+. . ....|+.+.++.||.|-.+
T Consensus 190 a~~~-~-~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 190 DRRS-R-AAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred HHHh-h-cCCCCeEEEEEecceeccC
Confidence 5321 0 0235799999999998644
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.022 Score=53.58 Aligned_cols=153 Identities=13% Similarity=0.059 Sum_probs=88.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcc------cCC-CCCC----CCCC-CC--CCCCCcHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKE------IVN-GNES----LPYF-PI--DEHVDSYG 70 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~------~~~-~~E~----~p~~-p~--~~~~~~Y~ 70 (389)
.+.+.++++|+.|+.++++++... .-.++|++||.....+... ..+ .+.+ .+.. +. ......|+
T Consensus 91 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 170 (275)
T PRK06940 91 ASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQ 170 (275)
T ss_pred hhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhH
Confidence 457789999999999999999764 1135677777654332100 000 0000 0100 00 01246899
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCH----HHHHHHHHcCCCcceecCCCccccceeHHHH
Q 016468 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL----PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNL 146 (389)
Q Consensus 71 ~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~----~~li~~~~~g~~~~~~g~~~~~~~~v~vdDl 146 (389)
.||+..+.+.+....+. .+.|+++.++.|+.|-.+-..... ......+....+ ..-+...+|+
T Consensus 171 asKaa~~~~~~~la~e~----~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~peei 237 (275)
T PRK06940 171 IAKRANALRVMAEAVKW----GERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP---------AGRPGTPDEI 237 (275)
T ss_pred HHHHHHHHHHHHHHHHH----ccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC---------cccCCCHHHH
Confidence 99999988887654211 236899999999998765321100 111111111110 1125778999
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 147 VLALILASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 147 a~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
++++..++.. ......|+.+.+.+|.
T Consensus 238 a~~~~fL~s~---------~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 238 AALAEFLMGP---------RGSFITGSDFLVDGGA 263 (275)
T ss_pred HHHHHHHcCc---------ccCcccCceEEEcCCe
Confidence 9999887641 1345578888776653
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.008 Score=55.94 Aligned_cols=114 Identities=15% Similarity=0.052 Sum_probs=75.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.|+.++++++.. .+..++|++||....++. + ....|+.||...+.++...
T Consensus 103 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~------~~~~Y~~sK~a~~~~~~~l 166 (263)
T PRK09072 103 AIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY----------P------GYASYCASKFALRGFSEAL 166 (263)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC----------C------CccHHHHHHHHHHHHHHHH
Confidence 4466788999999999999865 345689999886543221 0 1467999999988777666
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...++.++++.|+.+..+.... ... . . .. ........++|+|++++.+++
T Consensus 167 ~~~~----~~~~i~v~~v~Pg~~~t~~~~~----~~~-----~-~--~~--~~~~~~~~~~~va~~i~~~~~ 220 (263)
T PRK09072 167 RREL----ADTGVRVLYLAPRATRTAMNSE----AVQ-----A-L--NR--ALGNAMDDPEDVAAAVLQAIE 220 (263)
T ss_pred HHHh----cccCcEEEEEecCcccccchhh----hcc-----c-c--cc--cccCCCCCHHHHHHHHHHHHh
Confidence 4211 2357999999998886542211 000 0 0 00 001135678999999999997
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0034 Score=54.39 Aligned_cols=77 Identities=21% Similarity=0.177 Sum_probs=63.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
..+-+++++.+-...+.++|++.|+|+|+.+||.++ |.++ .-.|-..|-+.|+-+.+.+=
T Consensus 99 GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA----------d~sS--------rFlY~k~KGEvE~~v~eL~F-- 158 (238)
T KOG4039|consen 99 GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA----------DPSS--------RFLYMKMKGEVERDVIELDF-- 158 (238)
T ss_pred ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC----------Cccc--------ceeeeeccchhhhhhhhccc--
Confidence 345677888888889999999999999999999986 4444 36899999999999998851
Q ss_pred CCCCCCCCceEEEEecCceecCCCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEE 112 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~ 112 (389)
=.++|+||+.+-|....
T Consensus 159 --------~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 159 --------KHIIILRPGPLLGERTE 175 (238)
T ss_pred --------cEEEEecCcceeccccc
Confidence 35899999999997655
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.019 Score=53.43 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=81.7
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+....+++|+.++..+.+++. +.+-.++|++||..... ..| ....|+.||+..|.+++.+
T Consensus 116 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~------~~~~Y~asK~a~~~~~~~l 179 (260)
T PRK08416 116 GLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV----------YIE------NYAGHGTSKAAVETMVKYA 179 (260)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc----------CCC------CcccchhhHHHHHHHHHHH
Confidence 445677788887666655554 33456899999976311 011 1368999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|+++..+.|+.+--+-.... ............+ ...+...+|++++++.++..
T Consensus 180 a~el----~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~---------~~r~~~p~~va~~~~~l~~~----- 241 (260)
T PRK08416 180 ATEL----GEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSP---------LNRMGQPEDLAGACLFLCSE----- 241 (260)
T ss_pred HHHh----hhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHcCh-----
Confidence 5321 23589999999987743311100 0111111111111 11257799999999988751
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 242 ----~~~~~~G~~i~vdgg 256 (260)
T PRK08416 242 ----KASWLTGQTIVVDGG 256 (260)
T ss_pred ----hhhcccCcEEEEcCC
Confidence 023456887777655
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.023 Score=52.86 Aligned_cols=135 Identities=13% Similarity=0.041 Sum_probs=86.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++.+++... .-.++|++||..... +... ...|+.||+..+.+.+....
T Consensus 114 ~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~------------~~~~----~~~Y~asKaal~~l~~~la~ 177 (258)
T PRK07370 114 GFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR------------AIPN----YNVMGVAKAALEASVRYLAA 177 (258)
T ss_pred HHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc------------CCcc----cchhhHHHHHHHHHHHHHHH
Confidence 45778899999999999887643 125899999965311 1111 46899999999999888753
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
+. ...|+++.++.|+.|--+-.... .+.....+.... ....+...+|++.++..++..
T Consensus 178 el----~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~fl~s~------- 237 (258)
T PRK07370 178 EL----GPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKA---------PLRRTVTQTEVGNTAAFLLSD------- 237 (258)
T ss_pred Hh----CcCCeEEEEEecCcccCchhhccccchhhhhhhhhcC---------CcCcCCCHHHHHHHHHHHhCh-------
Confidence 21 33689999999998865421110 112112111111 111356679999999888751
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 238 --~~~~~tG~~i~vdgg 252 (258)
T PRK07370 238 --LASGITGQTIYVDAG 252 (258)
T ss_pred --hhccccCcEEEECCc
Confidence 133456887777555
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.023 Score=53.41 Aligned_cols=115 Identities=16% Similarity=0.072 Sum_probs=74.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++... +-.++|++||... .......+ ...|+.||...|.+++.+
T Consensus 113 ~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~----------~~~~~~~~----~~~Y~~sK~a~~~~~~~l 178 (273)
T PRK08278 113 RFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN----------LDPKWFAP----HTAYTMAKYGMSLCTLGL 178 (273)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh----------ccccccCC----cchhHHHHHHHHHHHHHH
Confidence 45677889999999999999743 3347889988542 11110011 578999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...+++++++.|+.+.. + ...+....+. .....+...+|++++++.++.
T Consensus 179 a~el----~~~~I~v~~i~Pg~~i~---t----~~~~~~~~~~--------~~~~~~~~p~~va~~~~~l~~ 231 (273)
T PRK08278 179 AEEF----RDDGIAVNALWPRTTIA---T----AAVRNLLGGD--------EAMRRSRTPEIMADAAYEILS 231 (273)
T ss_pred HHHh----hhcCcEEEEEeCCCccc---c----HHHHhccccc--------ccccccCCHHHHHHHHHHHhc
Confidence 5321 23579999999984321 1 1111111111 111235678999999999875
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0053 Score=56.39 Aligned_cols=79 Identities=13% Similarity=0.151 Sum_probs=58.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++.+ .+.+++|++||..+ +. +..+ ...|+.+|...|.++..+
T Consensus 101 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~-----------~~~~----~~~Y~~sK~a~~~~~~~~ 164 (243)
T PRK07023 101 AIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAA-RN-----------AYAG----WSVYCATKAALDHHARAV 164 (243)
T ss_pred HHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhh-cC-----------CCCC----chHHHHHHHHHHHHHHHH
Confidence 3467788999997766666553 45679999999763 22 1112 578999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCcee
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIY 107 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~Iy 107 (389)
... ...++++.+++|+.+-
T Consensus 165 ~~~-----~~~~i~v~~v~pg~~~ 183 (243)
T PRK07023 165 ALD-----ANRALRIVSLAPGVVD 183 (243)
T ss_pred Hhc-----CCCCcEEEEecCCccc
Confidence 642 2358999999998873
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=56.46 Aligned_cols=133 Identities=17% Similarity=0.171 Sum_probs=81.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--------C---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--------G---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV 75 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--------g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~ 75 (389)
.+.+..+++|+.|+.++++++... + -.++|++||.....+. + ....|+.||+.
T Consensus 111 ~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~------~~~~Y~asKaa 174 (306)
T PRK07792 111 EEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP----------V------GQANYGAAKAG 174 (306)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC----------C------CCchHHHHHHH
Confidence 356678899999999999987532 1 2489999997642211 1 13689999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 76 AEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 76 aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.++..+... ....|+++.++.|+. . +.....++. .... .. ....+++..+|++.++..++.
T Consensus 175 l~~l~~~la~e----~~~~gI~vn~i~Pg~--~---t~~~~~~~~----~~~~-~~---~~~~~~~~pe~va~~v~~L~s 237 (306)
T PRK07792 175 ITALTLSAARA----LGRYGVRANAICPRA--R---TAMTADVFG----DAPD-VE---AGGIDPLSPEHVVPLVQFLAS 237 (306)
T ss_pred HHHHHHHHHHH----hhhcCeEEEEECCCC--C---Cchhhhhcc----ccch-hh---hhccCCCCHHHHHHHHHHHcC
Confidence 99998876421 123689999999962 1 111111110 0000 00 112345689999999887764
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.. .....|+.|.+.+|.
T Consensus 238 ~~---------~~~~tG~~~~v~gg~ 254 (306)
T PRK07792 238 PA---------AAEVNGQVFIVYGPM 254 (306)
T ss_pred cc---------ccCCCCCEEEEcCCe
Confidence 10 234578888776553
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.035 Score=53.87 Aligned_cols=117 Identities=18% Similarity=0.188 Sum_probs=75.1
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+...++|+.|+.++.+++. +.+..++|++||... +.+ .|. ...|+.||+..+.+....
T Consensus 107 ~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~-~~~---------~p~------~~~Y~asKaal~~~~~sL 170 (330)
T PRK06139 107 AHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGG-FAA---------QPY------AAAYSASKFGLRGFSEAL 170 (330)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh-cCC---------CCC------chhHHHHHHHHHHHHHHH
Confidence 345689999999999888874 345568999999764 221 111 468999999755555544
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... +. ...++.++.+.|+.|..|....... . .+. .......+...+|+|++++.+++
T Consensus 171 ~~E-l~--~~~gI~V~~v~Pg~v~T~~~~~~~~-----~-~~~------~~~~~~~~~~pe~vA~~il~~~~ 227 (330)
T PRK06139 171 RGE-LA--DHPDIHVCDVYPAFMDTPGFRHGAN-----Y-TGR------RLTPPPPVYDPRRVAKAVVRLAD 227 (330)
T ss_pred HHH-hC--CCCCeEEEEEecCCccCcccccccc-----c-ccc------cccCCCCCCCHHHHHHHHHHHHh
Confidence 221 00 1247999999999998775331100 0 010 00111235789999999999986
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.01 Score=56.53 Aligned_cols=121 Identities=17% Similarity=0.074 Sum_probs=78.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.|+.++++++... +..++|++||... +.+. + ....|+.||+..|.+.....
T Consensus 108 ~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~------~~~~Y~asKaal~~~~~~l~ 171 (296)
T PRK05872 108 AFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAA-FAAA---------P------GMAAYCASKAGVEAFANALR 171 (296)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhh-cCCC---------C------CchHHHHHHHHHHHHHHHHH
Confidence 44677899999999999998643 2358999999774 2211 1 14689999999999988764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHH--HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP--RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~--~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... ...|+.+.++.|+.+..+....... .....+...... ....+...+|++++++.++.
T Consensus 172 ~e~----~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~-------p~~~~~~~~~va~~i~~~~~ 233 (296)
T PRK05872 172 LEV----AHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPW-------PLRRTTSVEKCAAAFVDGIE 233 (296)
T ss_pred HHH----HHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCC-------cccCCCCHHHHHHHHHHHHh
Confidence 210 2257999999999886553221100 111222211111 11245789999999999886
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0075 Score=57.18 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=85.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-------C---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-------G---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-------g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+..+++|+.++.++.+++... + -.++|++||.....+. + ....|+.||+..
T Consensus 114 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~------~~~~Y~asKaal 177 (286)
T PRK07791 114 EEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS----------V------GQGNYSAAKAGI 177 (286)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC----------C------CchhhHHHHHHH
Confidence 456788999999999998887532 1 2489999997753221 1 146899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.+.+....+. .+.|+++.++.|+ +. +.............. +.....+...+|++++++.++..
T Consensus 178 ~~l~~~la~el----~~~gIrVn~v~Pg-~~----T~~~~~~~~~~~~~~-------~~~~~~~~~pedva~~~~~L~s~ 241 (286)
T PRK07791 178 AALTLVAAAEL----GRYGVTVNAIAPA-AR----TRMTETVFAEMMAKP-------EEGEFDAMAPENVSPLVVWLGSA 241 (286)
T ss_pred HHHHHHHHHHH----HHhCeEEEEECCC-CC----CCcchhhHHHHHhcC-------cccccCCCCHHHHHHHHHHHhCc
Confidence 98888764211 2368999999997 42 111112222111111 01112356789999999988741
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
. .....|+.+.+.+|...
T Consensus 242 ~---------~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 242 E---------SRDVTGKVFEVEGGKIS 259 (286)
T ss_pred h---------hcCCCCcEEEEcCCceE
Confidence 0 33457888877666543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.012 Score=62.33 Aligned_cols=110 Identities=15% Similarity=0.121 Sum_probs=77.5
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++ ++.+..++|++||..+ +.+. + ....|+.||+..|.++..+
T Consensus 473 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~------~~~~Y~~sK~a~~~~~~~l 536 (657)
T PRK07201 473 DYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGV-QTNA---------P------RFSAYVASKAALDAFSDVA 536 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhh-cCCC---------C------CcchHHHHHHHHHHHHHHH
Confidence 46678899999998887776 4456779999999874 4321 1 1468999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... .+.|+++++++|+.|..+-.... . .. .....+..+++|+.++.++.
T Consensus 537 a~e~----~~~~i~v~~v~pg~v~T~~~~~~-----------~---~~----~~~~~~~~~~~a~~i~~~~~ 586 (657)
T PRK07201 537 ASET----LSDGITFTTIHMPLVRTPMIAPT-----------K---RY----NNVPTISPEEAADMVVRAIV 586 (657)
T ss_pred HHHH----HhhCCcEEEEECCcCcccccCcc-----------c---cc----cCCCCCCHHHHHHHHHHHHH
Confidence 4311 23589999999999976532210 0 00 01235779999999998875
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.034 Score=51.57 Aligned_cols=119 Identities=11% Similarity=0.025 Sum_probs=75.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc-----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF-----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~-----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+.+..+++|+.++..+.+++... + -.++|++||.....+ .. ....|+.||+..+.+.+
T Consensus 113 ~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~------------~~----~~~~Y~asKaal~~l~~ 176 (256)
T TIGR01500 113 QVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP------------FK----GWALYCAGKAARDMLFQ 176 (256)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC------------CC----CchHHHHHHHHHHHHHH
Confidence 45678999999988887777543 2 248999999764211 11 14689999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-----HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...... ...++.+..+.|+.|-.+-..... +.....+.... ..--+...+|+|.+++.+++
T Consensus 177 ~la~e~----~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~p~eva~~~~~l~~ 242 (256)
T TIGR01500 177 VLALEE----KNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELK---------AKGKLVDPKVSAQKLLSLLE 242 (256)
T ss_pred HHHHHh----cCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHH---------hcCCCCCHHHHHHHHHHHHh
Confidence 764321 236799999999988433110000 01111111100 00125778999999999885
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.062 Score=49.22 Aligned_cols=119 Identities=13% Similarity=0.148 Sum_probs=80.2
Q ss_pred cCcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
..+.++.+++|+.|..|..++.. +++-.++|.+||....| ++.- .+.|+.||+.--++.+
T Consensus 102 ~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~------------~y~~----~~vY~ATK~aV~~fs~ 165 (246)
T COG4221 102 LDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY------------PYPG----GAVYGATKAAVRAFSL 165 (246)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc------------cCCC----CccchhhHHHHHHHHH
Confidence 35778899999999888877764 45555899999987522 2222 4789999999888777
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC--C--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER--H--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
....+. .+.+++++.+-|+.|-...... + -..-..... .....+..+|+|+++..++++
T Consensus 166 ~LR~e~----~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~ 228 (246)
T COG4221 166 GLRQEL----AGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGGTALTPEDIAEAVLFAATQ 228 (246)
T ss_pred HHHHHh----cCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccCCCCCHHHHHHHHHHHHhC
Confidence 664321 3468999999999884431110 0 001111111 123578899999999999983
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.059 Score=50.64 Aligned_cols=137 Identities=11% Similarity=0.068 Sum_probs=86.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++.+++... .-.++|++||..... ..| ....|+.||+..+.+.+...
T Consensus 111 ~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~----------~~~------~~~~Y~asKaAl~~l~r~la 174 (271)
T PRK06505 111 ENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR----------VMP------NYNVMGVAKAALEASVRYLA 174 (271)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc----------cCC------ccchhhhhHHHHHHHHHHHH
Confidence 356678889999999998888643 125899999976411 111 14689999999998888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++..+.|+.|-.+-.... ............+. .-+...+|++++++.++..
T Consensus 175 ~el----~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~peeva~~~~fL~s~------ 235 (271)
T PRK06505 175 ADY----GPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL---------RRTVTIDEVGGSALYLLSD------ 235 (271)
T ss_pred HHH----hhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc---------cccCCHHHHHHHHHHHhCc------
Confidence 321 23689999999998865432111 11122222111110 1245689999999888741
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 236 ---~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 236 ---LSSGVTGEIHFVDSGY 251 (271)
T ss_pred ---cccccCceEEeecCCc
Confidence 0334568877776653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.051 Score=50.35 Aligned_cols=135 Identities=11% Similarity=0.107 Sum_probs=86.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++..+.+++... .-.++|++||.... ...| ....|+.||+..+.+.+....
T Consensus 110 ~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~----------~~~~------~~~~Y~asKaal~~l~~~la~ 173 (252)
T PRK06079 110 GYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE----------RAIP------NYNVMGIAKAALESSVRYLAR 173 (252)
T ss_pred HHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc----------ccCC------cchhhHHHHHHHHHHHHHHHH
Confidence 46678899999999999888754 12579999986531 0011 146899999999999987653
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
+. .+.|+++.++.|+.|-.+-.... -+.+.+......+ ...+...+|+++++..++...
T Consensus 174 el----~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~~~~l~s~~------ 234 (252)
T PRK06079 174 DL----GKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV---------DGVGVTIEEVGNTAAFLLSDL------ 234 (252)
T ss_pred Hh----hhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCc---------ccCCCCHHHHHHHHHHHhCcc------
Confidence 21 23689999999999865421111 1222222222111 112567899999998887510
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
.....|+++.+.+|
T Consensus 235 ---~~~itG~~i~vdgg 248 (252)
T PRK06079 235 ---STGVTGDIIYVDKG 248 (252)
T ss_pred ---cccccccEEEeCCc
Confidence 33456777766554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.061 Score=50.14 Aligned_cols=136 Identities=12% Similarity=0.064 Sum_probs=85.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++..+.+++... +-.++|++||.... . +... ...|+.||+..+.+.+....
T Consensus 112 ~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~----------~--~~~~----~~~Y~asKaal~~l~~~la~ 175 (260)
T PRK06997 112 NFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE----------R--VVPN----YNTMGLAKASLEASVRYLAV 175 (260)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc----------c--CCCC----cchHHHHHHHHHHHHHHHHH
Confidence 45667899999999999888764 23589999987631 1 1111 35799999999998887653
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
+. ...|+++..+.|+.|--+-.... .....+.+....+ ...+...+|+++++..++..
T Consensus 176 el----~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~~~~l~s~------- 235 (260)
T PRK06997 176 SL----GPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAP---------LRRNVTIEEVGNVAAFLLSD------- 235 (260)
T ss_pred Hh----cccCeEEEEEeeCccccchhccccchhhHHHHHHhcCc---------ccccCCHHHHHHHHHHHhCc-------
Confidence 21 23689999999998854311110 1111111111110 11256789999999988751
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.++.
T Consensus 236 --~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 236 --LASGVTGEITHVDSGF 251 (260)
T ss_pred --cccCcceeEEEEcCCh
Confidence 0345678877765553
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.043 Score=50.88 Aligned_cols=142 Identities=10% Similarity=-0.025 Sum_probs=84.4
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++. +.+-.++|++||.... .+... ...|+.+|...+.+.+..
T Consensus 104 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~------------~~~~~----~~~y~ask~al~~~~~~l 167 (259)
T PRK06125 104 AWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE------------NPDAD----YICGSAGNAALMAFTRAL 167 (259)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc------------CCCCC----chHhHHHHHHHHHHHHHH
Confidence 456678899999999988874 3344589999986531 11111 357899999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc---CCCc--ceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL---GLVP--FKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~---g~~~--~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
... ....|+++..+.|+.+-.+.. ..++..-.. +... ..+-.......+...+|+++++..++..
T Consensus 168 a~e----~~~~gi~v~~i~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~-- 237 (259)
T PRK06125 168 GGK----SLDDGVRVVGVNPGPVATDRM----LTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASP-- 237 (259)
T ss_pred HHH----hCccCeEEEEEecCccccHHH----HHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCc--
Confidence 421 133689999999988765421 111110000 0000 0000000012356889999999888741
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
......|+.+.+.+|..
T Consensus 238 -------~~~~~~G~~i~vdgg~~ 254 (259)
T PRK06125 238 -------RSGYTSGTVVTVDGGIS 254 (259)
T ss_pred -------hhccccCceEEecCCee
Confidence 03345788887776643
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.067 Score=49.83 Aligned_cols=135 Identities=10% Similarity=0.049 Sum_probs=85.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++..+++++... .-.++|++||..... ..| ....|+.||+..+.+.+....
T Consensus 113 ~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----------~~~------~~~~Y~asKaal~~l~~~la~ 176 (260)
T PRK06603 113 NFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK----------VIP------NYNVMGVAKAALEASVKYLAN 176 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc----------CCC------cccchhhHHHHHHHHHHHHHH
Confidence 56678899999999999887543 124899999976311 011 146899999999988887653
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. ...|+++.++.|+.|-.+-... ..+..........+ ...+...+|+++++..++..
T Consensus 177 el----~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~~~~L~s~------- 236 (260)
T PRK06603 177 DM----GENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAP---------LKRNTTQEDVGGAAVYLFSE------- 236 (260)
T ss_pred Hh----hhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCc-------
Confidence 21 2368999999999885432110 01122222221111 11256789999999988751
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 237 --~~~~itG~~i~vdgG 251 (260)
T PRK06603 237 --LSKGVTGEIHYVDCG 251 (260)
T ss_pred --ccccCcceEEEeCCc
Confidence 033456887777655
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.066 Score=49.82 Aligned_cols=134 Identities=10% Similarity=-0.010 Sum_probs=82.8
Q ss_pred chhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
....+++|+.++.++.+++...- -.++|++||..... ..| ....|+.||+..+.+.+....+
T Consensus 115 ~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------~~~------~~~~Y~asKaal~~l~~~la~e 178 (257)
T PRK08594 115 FLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------VVQ------NYNVMGVAKASLEASVKYLAND 178 (257)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----------CCC------CCchhHHHHHHHHHHHHHHHHH
Confidence 34567889999988888877541 24899999976411 011 1368999999999998876532
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
. .+.|+++..+.|+.|-.+-.... ............ ....+...+|++++++.++..
T Consensus 179 l----~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~~va~~~~~l~s~-------- 237 (257)
T PRK08594 179 L----GKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERA---------PLRRTTTQEEVGDTAAFLFSD-------- 237 (257)
T ss_pred h----hhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcC---------CccccCCHHHHHHHHHHHcCc--------
Confidence 1 23689999999998865421100 011111111100 011256789999999888751
Q ss_pred CCCCCCCCceEEEeCC
Q 016468 165 KGRPIASGQPYFVSDG 180 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 238 -~~~~~tG~~~~~dgg 252 (257)
T PRK08594 238 -LSRGVTGENIHVDSG 252 (257)
T ss_pred -ccccccceEEEECCc
Confidence 133456877776555
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.028 Score=52.26 Aligned_cols=133 Identities=14% Similarity=0.051 Sum_probs=83.8
Q ss_pred chhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+..+++|+.++.++++++... .-.++|++||.....+. . ....|+.||+..|.+++....
T Consensus 109 ~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~----~~~~Y~~sK~a~~~~~~~la~ 172 (263)
T PRK06200 109 FDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG------------G----GGPLYTASKHAVVGLVRQLAY 172 (263)
T ss_pred HHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------------C----CCchhHHHHHHHHHHHHHHHH
Confidence 4567889999999999988743 22479999998742211 1 136799999999999988753
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC-----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
.. . .++++.++.|+.|.-+-... ..+.......... ...-+...+|+++++..++
T Consensus 173 el----~-~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~eva~~~~fl~ 238 (263)
T PRK06200 173 EL----A-PKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAIT---------PLQFAPQPEDHTGPYVLLA 238 (263)
T ss_pred HH----h-cCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCC---------CCCCCCCHHHHhhhhhhee
Confidence 21 1 24999999999886542110 0011111111111 1123567899999998876
Q ss_pred hcccCCCCCCCC-CCCCCCceEEEeCC
Q 016468 155 MGLLDDIPGQKG-RPIASGQPYFVSDG 180 (389)
Q Consensus 155 ~~l~~~~~~~~~-~~~~~g~~y~i~~~ 180 (389)
.. . .....|+.+.+.+|
T Consensus 239 s~---------~~~~~itG~~i~vdgG 256 (263)
T PRK06200 239 SR---------RNSRALTGVVINADGG 256 (263)
T ss_pred cc---------cccCcccceEEEEcCc
Confidence 41 1 22457888877665
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.015 Score=56.20 Aligned_cols=110 Identities=14% Similarity=0.025 Sum_probs=74.0
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+++. +.+..++|++||..+.+.+ ..| ....|+.||+..+.+....
T Consensus 157 ~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--------~~p------~~~~Y~aSKaal~~~~~~L 222 (320)
T PLN02780 157 LLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--------SDP------LYAVYAATKAYIDQFSRCL 222 (320)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--------CCc------cchHHHHHHHHHHHHHHHH
Confidence 345688999999999998875 3466799999997642210 011 1478999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..+. .+.|+++.++.|+.|-.+-.. ..... .-....+++|+.++.++.
T Consensus 223 ~~El----~~~gI~V~~v~PG~v~T~~~~---------~~~~~-----------~~~~~p~~~A~~~~~~~~ 270 (320)
T PLN02780 223 YVEY----KKSGIDVQCQVPLYVATKMAS---------IRRSS-----------FLVPSSDGYARAALRWVG 270 (320)
T ss_pred HHHH----hccCeEEEEEeeCceecCccc---------ccCCC-----------CCCCCHHHHHHHHHHHhC
Confidence 5321 236899999999988543111 00000 012467888888888874
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.096 Score=48.81 Aligned_cols=135 Identities=11% Similarity=0.120 Sum_probs=83.6
Q ss_pred chhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+..+++|+.++..+.+++... +-.++|++||..... ..| ....|+.||+..+.+.+....
T Consensus 113 ~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~----------~~~------~~~~Y~asKaal~~l~~~la~ 176 (261)
T PRK08690 113 FNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR----------AIP------NYNVMGMAKASLEAGIRFTAA 176 (261)
T ss_pred HHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc----------CCC------CcccchhHHHHHHHHHHHHHH
Confidence 4556788999988888776532 225799999876411 011 146899999999988776642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. .+.|+++..+.|+.|--+-.... .+.....+.+..+ ...+...+|++.++..++...
T Consensus 177 e~----~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~peevA~~v~~l~s~~------ 237 (261)
T PRK08690 177 CL----GKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP---------LRRNVTIEEVGNTAAFLLSDL------ 237 (261)
T ss_pred Hh----hhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCcc------
Confidence 11 23689999999998854321111 1122222211111 123667899999999988511
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 238 ---~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 238 ---SSGITGEITYVDGGY 252 (261)
T ss_pred ---cCCcceeEEEEcCCc
Confidence 345578887776664
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.072 Score=49.51 Aligned_cols=136 Identities=12% Similarity=0.120 Sum_probs=85.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++.+++... .-.++|.+||.... ...+ ....|+.||+..+.+.+...
T Consensus 114 ~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~----------~~~~------~~~~Y~asKaal~~l~~~la 177 (258)
T PRK07533 114 EGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE----------KVVE------NYNLMGPVKAALESSVRYLA 177 (258)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc----------cCCc------cchhhHHHHHHHHHHHHHHH
Confidence 356788999999999999988653 12479999986531 1111 14689999999998887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.+. ...|+++.++.|+.|-.+-... .............+ ...+...+|++.++..++..
T Consensus 178 ~el----~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~~~~L~s~------ 238 (258)
T PRK07533 178 AEL----GPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAP---------LRRLVDIDDVGAVAAFLASD------ 238 (258)
T ss_pred HHh----hhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCh------
Confidence 321 2368999999999885442111 01222222221111 11356789999999888741
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 239 ---~~~~itG~~i~vdgg 253 (258)
T PRK07533 239 ---AARRLTGNTLYIDGG 253 (258)
T ss_pred ---hhccccCcEEeeCCc
Confidence 023456877766554
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.076 Score=50.01 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=86.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++.+++... .-.++|++||..... ..| ....|+.||+..+.+.+...
T Consensus 109 ~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~----------~~~------~~~~Y~asKaal~~l~~~la 172 (274)
T PRK08415 109 EAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK----------YVP------HYNVMGVAKAALESSVRYLA 172 (274)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc----------CCC------cchhhhhHHHHHHHHHHHHH
Confidence 345778999999999999888753 125899999965311 111 14679999999998888775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.+. ...|+++..+-|+.|-.+..... ............ + ..-+...+|+++++..++..
T Consensus 173 ~el----~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-------p--l~r~~~pedva~~v~fL~s~------ 233 (274)
T PRK08415 173 VDL----GKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINA-------P--LKKNVSIEEVGNSGMYLLSD------ 233 (274)
T ss_pred HHh----hhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhC-------c--hhccCCHHHHHHHHHHHhhh------
Confidence 321 23689999999998865421110 000000000000 0 11256789999999887751
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 234 ---~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 234 ---LSSGVTGEIHYVDAGY 249 (274)
T ss_pred ---hhhcccccEEEEcCcc
Confidence 0334578887776664
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.11 Score=48.89 Aligned_cols=137 Identities=12% Similarity=0.102 Sum_probs=86.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++... +-.++|.+||... . ...| ....|+.||+..+.+.+...
T Consensus 114 ~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~-~---------~~~p------~~~~Y~asKaal~~l~~~la 177 (272)
T PRK08159 114 DNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGA-E---------KVMP------HYNVMGVAKAALEASVKYLA 177 (272)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccc-c---------cCCC------cchhhhhHHHHHHHHHHHHH
Confidence 356778899999999999988764 2258999998653 1 0111 14689999999998888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.++.|+.|-.+-... ............. + ...+...+|++++++.++.. .
T Consensus 178 ~el----~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~r~~~peevA~~~~~L~s~---~-- 239 (272)
T PRK08159 178 VDL----GPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNA--P-------LRRTVTIEEVGDSALYLLSD---L-- 239 (272)
T ss_pred HHh----cccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCC--c-------ccccCCHHHHHHHHHHHhCc---c--
Confidence 321 3368999999999885431110 0001111111010 0 11246789999999888751 1
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.+|.
T Consensus 240 ----~~~itG~~i~vdgG~ 254 (272)
T PRK08159 240 ----SRGVTGEVHHVDSGY 254 (272)
T ss_pred ----ccCccceEEEECCCc
Confidence 335578888777664
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.052 Score=50.33 Aligned_cols=135 Identities=15% Similarity=0.051 Sum_probs=80.4
Q ss_pred hhhhHhhhhHHHHHHHHH----H-HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 10 GRVDEVNINGTCHVIEAC----L-EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa----~-~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.....+|+.++..+..++ . +.+-.++|++||..+ .. +..+ ...|+.||+..+.+.+...
T Consensus 103 ~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~-~~-----------~~~~----~~~y~~sKaa~~~~~~~la 166 (259)
T PRK08340 103 LEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSV-KE-----------PMPP----LVLADVTRAGLVQLAKGVS 166 (259)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCccc-CC-----------CCCC----chHHHHHHHHHHHHHHHHH
Confidence 344567877765554433 2 234568999999874 11 1111 4689999999999988875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHH------------HHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIV------------SLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li------------~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
... ...|+++..+.|+.|-.+........+. ..+.... + ..-+...+|+++++..
T Consensus 167 ~e~----~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p--~~r~~~p~dva~~~~f 233 (259)
T PRK08340 167 RTY----GGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT-------P--LKRTGRWEELGSLIAF 233 (259)
T ss_pred HHh----CCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC-------C--ccCCCCHHHHHHHHHH
Confidence 421 3468999999999875543211111100 0111100 1 1125678999999988
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
++... .....|++..+.+|..
T Consensus 234 L~s~~---------~~~itG~~i~vdgg~~ 254 (259)
T PRK08340 234 LLSEN---------AEYMLGSTIVFDGAMT 254 (259)
T ss_pred HcCcc---------cccccCceEeecCCcC
Confidence 87511 3456788777766643
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.12 Score=48.07 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=82.8
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.++. ++.+..++|++||.... .+ .+ ....|+.+|+..+.+.+..
T Consensus 110 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~---------~~------~~~~y~asKaal~~~~~~l 173 (265)
T PRK07062 110 AWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLAL-QP---------EP------HMVATSAARAGLLNLVKSL 173 (265)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccccc-CC---------CC------CchHhHHHHHHHHHHHHHH
Confidence 45667788888876666655 34456799999997642 11 01 1468999999988877765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH----------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL----------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~----------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
..+. .+.|+++.+++|+.|-.+...... ............. ....+...+|+++++..+
T Consensus 174 a~e~----~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~~p~~va~~~~~L 242 (265)
T PRK07062 174 ATEL----APKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGI-------PLGRLGRPDEAARALFFL 242 (265)
T ss_pred HHHh----hhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCC-------CcCCCCCHHHHHHHHHHH
Confidence 4321 236899999999988654321100 0111111000000 112356789999999887
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+... .....|+.+.+.+|.
T Consensus 243 ~s~~---------~~~~tG~~i~vdgg~ 261 (265)
T PRK07062 243 ASPL---------SSYTTGSHIDVSGGF 261 (265)
T ss_pred hCch---------hcccccceEEEcCce
Confidence 6411 335678888876653
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.024 Score=58.78 Aligned_cols=82 Identities=18% Similarity=0.158 Sum_probs=59.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++.. .+ -.++|++||..+ |.+.+ ....|+.||+..|.+..
T Consensus 414 ~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~---------------~~~~Y~~sKaa~~~~~~ 477 (582)
T PRK05855 414 EDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAA-YAPSR---------------SLPAYATSKAAVLMLSE 477 (582)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh-ccCCC---------------CCcHHHHHHHHHHHHHH
Confidence 35567788999999999988643 33 258999999874 43211 14789999999888877
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceec
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYG 108 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyG 108 (389)
...... .+.|++++++.|+.|-.
T Consensus 478 ~l~~e~----~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 478 CLRAEL----AAAGIGVTAICPGFVDT 500 (582)
T ss_pred HHHHHh----cccCcEEEEEEeCCCcc
Confidence 654211 23689999999998843
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.009 Score=54.90 Aligned_cols=136 Identities=17% Similarity=0.148 Sum_probs=90.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++..+.+++... .-.++|++||.... .. ... ...|+.+|+..|.+++...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~----------~~--~~~----~~~y~~sKaal~~l~r~lA 162 (241)
T PF13561_consen 99 EDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQ----------RP--MPG----YSAYSASKAALEGLTRSLA 162 (241)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGT----------SB--STT----THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhc----------cc--Ccc----chhhHHHHHHHHHHHHHHH
Confidence 356778899999999999998653 12579999987641 11 111 4689999999999988765
Q ss_pred CCCCCCCCC-CCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 85 GRPFKKNNR-KCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 85 ~~~~~~~~~-~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
... .+ .|+++.+|.|+.|-.+.... ..+.+........+. ..+...+|+|.++..++...
T Consensus 163 ~el----~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl---------~r~~~~~evA~~v~fL~s~~---- 225 (241)
T PF13561_consen 163 KEL----APKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPL---------GRLGTPEEVANAVLFLASDA---- 225 (241)
T ss_dssp HHH----GGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTT---------SSHBEHHHHHHHHHHHHSGG----
T ss_pred HHh----ccccCeeeeeecccceeccchhccccccchhhhhhhhhcc---------CCCcCHHHHHHHHHHHhCcc----
Confidence 322 33 58999999998886442111 123444444433322 12467999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
..-..|+.+.+.+|
T Consensus 226 -----a~~itG~~i~vDGG 239 (241)
T PF13561_consen 226 -----ASYITGQVIPVDGG 239 (241)
T ss_dssp -----GTTGTSEEEEESTT
T ss_pred -----ccCccCCeEEECCC
Confidence 33567888877665
|
... |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.025 Score=52.57 Aligned_cols=81 Identities=15% Similarity=0.120 Sum_probs=60.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++++++...- -.++|++||...+++. . ....|+.||+..|.+++.+.
T Consensus 107 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~----~~~~Y~~sKaa~~~l~~~la 170 (262)
T TIGR03325 107 AFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN------------G----GGPLYTAAKHAVVGLVKELA 170 (262)
T ss_pred HHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC------------C----CCchhHHHHHHHHHHHHHHH
Confidence 356789999999999999997631 2479999887643221 0 13589999999999998876
Q ss_pred CCCCCCCCCCCceEEEEecCceecC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
... . ..+++..+.|+.|..+
T Consensus 171 ~e~----~-~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 171 FEL----A-PYVRVNGVAPGGMSSD 190 (262)
T ss_pred Hhh----c-cCeEEEEEecCCCcCC
Confidence 421 1 2389999999998754
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.19 Score=44.15 Aligned_cols=118 Identities=22% Similarity=0.196 Sum_probs=79.6
Q ss_pred HhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHH--HHHHhCCCCCCCC
Q 016468 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQ--LVLKSNGRPFKKN 91 (389)
Q Consensus 14 ~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~--~l~~~~~~~~~~~ 91 (389)
..+......+++..++.+++|++.++..+..|-.... --.+.|..| ...|...+..+|. .++..
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~--rLvD~p~fP----~ey~~~A~~~ae~L~~Lr~~-------- 144 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGT--RLVDTPDFP----AEYKPEALAQAEFLDSLRAE-------- 144 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCc--eeecCCCCc----hhHHHHHHHHHHHHHHHhhc--------
Confidence 3445557789999999999999999877654432211 113455555 6788999999994 34333
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+++|+-+=|+..|-||++.. ..+.|+-...... .--++|...|.|-|++.-++
T Consensus 145 --~~l~WTfvSPaa~f~PGerTg------~yrlggD~ll~n~--~G~SrIS~aDYAiA~lDe~E 198 (211)
T COG2910 145 --KSLDWTFVSPAAFFEPGERTG------NYRLGGDQLLVNA--KGESRISYADYAIAVLDELE 198 (211)
T ss_pred --cCcceEEeCcHHhcCCccccC------ceEeccceEEEcC--CCceeeeHHHHHHHHHHHHh
Confidence 359999999999999977621 1122332223221 22367999999999999888
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.33 Score=45.37 Aligned_cols=136 Identities=13% Similarity=0.124 Sum_probs=83.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++..+.+++... .-.++|++||.... ...| ....|+.||+..+.+++....
T Consensus 112 ~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~----------~~~~------~~~~Y~asKaal~~l~~~la~ 175 (262)
T PRK07984 112 GFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE----------RAIP------NYNVMGLAKASLEANVRYMAN 175 (262)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC----------CCCC------CcchhHHHHHHHHHHHHHHHH
Confidence 34567789999988888887542 12479999986531 0111 136899999999999887753
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. ...|+++.++-|+.|--+-... ....+........+ ..-+...+|++.++..++..
T Consensus 176 el----~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~~~~L~s~------- 235 (262)
T PRK07984 176 AM----GPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP---------IRRTVTIEDVGNSAAFLCSD------- 235 (262)
T ss_pred Hh----cccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCC---------CcCCCCHHHHHHHHHHHcCc-------
Confidence 21 2368999999999885431110 01122222221111 11356789999999988751
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.++.
T Consensus 236 --~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 236 --LSAGISGEVVHVDGGF 251 (262)
T ss_pred --ccccccCcEEEECCCc
Confidence 1334568887776653
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.076 Score=54.68 Aligned_cols=120 Identities=18% Similarity=0.182 Sum_probs=76.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCC-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvk-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++++++... +-. ++|++||..+..+. + ....|+.||+..+.+.+
T Consensus 103 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~----------~------~~~~Y~asKaal~~l~~ 166 (520)
T PRK06484 103 EEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL----------P------KRTAYSASKAAVISLTR 166 (520)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC----------C------CCchHHHHHHHHHHHHH
Confidence 345778999999999999999764 333 89999998753221 1 14689999999999888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHH--HH-HHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP--RI-VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~--~l-i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...... ...+++++++.|+.|-.+....... .. ........ + ...+...+|+++++..++.
T Consensus 167 ~la~e~----~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~va~~v~~l~~ 230 (520)
T PRK06484 167 SLACEW----AAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRI-------P--LGRLGRPEEIAEAVFFLAS 230 (520)
T ss_pred HHHHHh----hhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcC-------C--CCCCcCHHHHHHHHHHHhC
Confidence 764321 2357999999999885442211000 00 00011000 0 1124578999999888765
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.18 Score=45.74 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=81.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++-++++++... .-.++|++||... + . ...|+.||+..+.+.+...
T Consensus 96 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------~--~----~~~Y~asKaal~~~~~~la 155 (223)
T PRK05884 96 NAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------P--A----GSAEAAIKAALSNWTAGQA 155 (223)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------C--C----ccccHHHHHHHHHHHHHHH
Confidence 356788999999999999998753 2258999998531 1 1 3689999999999988775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
... ...|+++..+.|+.+-.+. ..... . . + .-..+|+++++..++..
T Consensus 156 ~e~----~~~gI~v~~v~PG~v~t~~--------~~~~~--~-~-----p-----~~~~~~ia~~~~~l~s~-------- 202 (223)
T PRK05884 156 AVF----GTRGITINAVACGRSVQPG--------YDGLS--R-T-----P-----PPVAAEIARLALFLTTP-------- 202 (223)
T ss_pred HHh----hhcCeEEEEEecCccCchh--------hhhcc--C-C-----C-----CCCHHHHHHHHHHHcCc--------
Confidence 321 2368999999999885331 11110 0 0 0 12679999999887641
Q ss_pred CCCCCCCCceEEEeCCC
Q 016468 165 KGRPIASGQPYFVSDGF 181 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.+|.
T Consensus 203 -~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 203 -AARHITGQTLHVSHGA 218 (223)
T ss_pred -hhhccCCcEEEeCCCe
Confidence 1345567877765553
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.39 Score=43.60 Aligned_cols=115 Identities=10% Similarity=-0.033 Sum_probs=74.2
Q ss_pred chhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+...++|+.++.++.+++... +..+++++||... .. .+. +..+ ...|+.+|+..+.++....
T Consensus 97 ~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~---~~-----~~~-~~~~----~~~Y~asK~a~~~~~~~la 163 (235)
T PRK09009 97 FLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG---SI-----SDN-RLGG----WYSYRASKAALNMFLKTLS 163 (235)
T ss_pred HHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc---cc-----ccC-CCCC----cchhhhhHHHHHHHHHHHH
Confidence 3467889999988888877653 4468999987432 11 111 1111 4689999999999988765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+. .. ...++.+..+.|+.+-.+.... ..... ....+...+|++++++.++.
T Consensus 164 ~e~-~~-~~~~i~v~~v~PG~v~t~~~~~--------~~~~~---------~~~~~~~~~~~a~~~~~l~~ 215 (235)
T PRK09009 164 IEW-QR-SLKHGVVLALHPGTTDTALSKP--------FQQNV---------PKGKLFTPEYVAQCLLGIIA 215 (235)
T ss_pred HHh-hc-ccCCeEEEEEcccceecCCCcc--------hhhcc---------ccCCCCCHHHHHHHHHHHHH
Confidence 321 00 1147899999999987654321 00011 11225788999999999986
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.11 Score=49.93 Aligned_cols=131 Identities=14% Similarity=0.074 Sum_probs=75.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC--CCeEEEecCCceecCCc----ccCCC------------------CCCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG--IQRLVYVSTYNVVFGGK----EIVNG------------------NESLP 58 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g--vkrlV~~SS~~vvyg~~----~~~~~------------------~E~~p 58 (389)
.+.+..+++|+.|+..+.+++.. .+ ..|+|++||..+ +... ...+. .++.+
T Consensus 104 ~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (314)
T TIGR01289 104 DGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG-NTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKE 182 (314)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc-ccccCCCcCCCcccccccccccccCCCcccccCCCC
Confidence 34567889999998888776644 32 369999999874 3211 00000 01111
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC-HH---HHHHHHHcCCCcceecCC
Q 016468 59 YFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LP---RIVSLAKLGLVPFKIGEP 134 (389)
Q Consensus 59 ~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~---~li~~~~~g~~~~~~g~~ 134 (389)
+. +...|+.||+....+..+...+. . ...|+.++.++||.|...+-... .+ .++....... .
T Consensus 183 ~~----~~~~Y~~SK~a~~~~~~~la~~~-~--~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~------~- 248 (314)
T TIGR01289 183 FK----GAKAYKDSKVCNMLTVRELHRRF-H--DETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQKYI------T- 248 (314)
T ss_pred cc----hhhhHHHhHHHHHHHHHHHHHHh-c--cCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHHHH------h-
Confidence 22 25689999999877777664321 0 12479999999999864322111 11 1111111000 0
Q ss_pred CccccceeHHHHHHHHHHHHh
Q 016468 135 SVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 135 ~~~~~~v~vdDla~a~~~a~~ 155 (389)
..+...++.++.++.++.
T Consensus 249 ---~~~~~~~~~a~~l~~~~~ 266 (314)
T TIGR01289 249 ---KGYVSEEEAGERLAQVVS 266 (314)
T ss_pred ---ccccchhhhhhhhHHhhc
Confidence 124678889998888776
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.37 Score=44.67 Aligned_cols=135 Identities=13% Similarity=-0.004 Sum_probs=81.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++.+++... .-.++|.+|+... ...| ....|+.||+..+.+.+....
T Consensus 112 ~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-----------~~~~------~~~~Y~asKaal~~l~~~la~ 174 (256)
T PRK07889 112 DVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-----------VAWP------AYDWMGVAKAALESTNRYLAR 174 (256)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-----------ccCC------ccchhHHHHHHHHHHHHHHHH
Confidence 34557899999999998888653 1247888875331 1111 146799999999988887643
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. ...|+++..+.|+.|--+-.... .....+......+ ....+...+|+|++++.++..
T Consensus 175 el----~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--------~~~~~~~p~evA~~v~~l~s~------- 235 (256)
T PRK07889 175 DL----GPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAP--------LGWDVKDPTPVARAVVALLSD------- 235 (256)
T ss_pred Hh----hhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCc--------cccccCCHHHHHHHHHHHhCc-------
Confidence 21 23689999999998865421110 0111111111110 001356789999999988751
Q ss_pred CCCCCCCCCceEEEeCC
Q 016468 164 QKGRPIASGQPYFVSDG 180 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.++
T Consensus 236 --~~~~~tG~~i~vdgg 250 (256)
T PRK07889 236 --WFPATTGEIVHVDGG 250 (256)
T ss_pred --ccccccceEEEEcCc
Confidence 123456777766554
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.096 Score=47.43 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=58.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++.+++... +..+++++||.. |..+. .+.. ....|+.+|+..|.+++.+.
T Consensus 96 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~---g~~~~------~~~~----~~~~Y~~sK~a~~~~~~~l~ 162 (225)
T PRK08177 96 EIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL---GSVEL------PDGG----EMPLYKASKAALNSMTRSFV 162 (225)
T ss_pred HHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc---ccccc------CCCC----CccchHHHHHHHHHHHHHHH
Confidence 45567789999999999988653 335788888843 22111 1111 14579999999999998775
Q ss_pred CCCCCCCCCCCceEEEEecCceecC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
... ...++.+..++|+.|-.+
T Consensus 163 ~e~----~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 163 AEL----GEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHh----hcCCeEEEEEcCCceecC
Confidence 321 236799999999988543
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.57 Score=44.93 Aligned_cols=138 Identities=8% Similarity=0.024 Sum_probs=85.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++-++.+++... .-.++|++||..... ..|. ....|+.||+..+.+.+...
T Consensus 144 e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~----------~~p~-----~~~~Y~asKaAl~~l~~~la 208 (303)
T PLN02730 144 KGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASER----------IIPG-----YGGGMSSAKAALESDTRVLA 208 (303)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcC----------CCCC-----CchhhHHHHHHHHHHHHHHH
Confidence 467788999999999999888664 115899999976411 1110 01379999999999888775
Q ss_pred CCCCCCCCC-CCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 85 GRPFKKNNR-KCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 85 ~~~~~~~~~-~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
... .. .|+++..+-|+.|--+-... ..+.......... +- ..+...+|++.+++.++...
T Consensus 209 ~El----~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~-------pl--~r~~~peevA~~~~fLaS~~---- 271 (303)
T PLN02730 209 FEA----GRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANA-------PL--QKELTADEVGNAAAFLASPL---- 271 (303)
T ss_pred HHh----CcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcC-------CC--CCCcCHHHHHHHHHHHhCcc----
Confidence 321 12 58999999998885442211 0111111111111 10 12457899999999887511
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+.+.++.
T Consensus 272 -----a~~itG~~l~vdGG~ 286 (303)
T PLN02730 272 -----ASAITGATIYVDNGL 286 (303)
T ss_pred -----ccCccCCEEEECCCc
Confidence 334567777665553
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.13 Score=49.29 Aligned_cols=95 Identities=16% Similarity=0.111 Sum_probs=58.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cC--CCeEEEecCCceecC---Cc--ccCCCC-----------C-------CCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FG--IQRLVYVSTYNVVFG---GK--EIVNGN-----------E-------SLP 58 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~g--vkrlV~~SS~~vvyg---~~--~~~~~~-----------E-------~~p 58 (389)
+.+..+++|+.|+.++.+++.. .+ ..|+|++||..+..+ +. +....+ + ..+
T Consensus 99 ~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (308)
T PLN00015 99 GFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGE 178 (308)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccC
Confidence 5567899999998888766644 33 469999999764211 00 000000 0 001
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecC
Q 016468 59 YFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 59 ~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
+ .....|+.||+..+.......++.. ...|+.++++.||.|...
T Consensus 179 ~----~~~~aY~~SK~a~~~~~~~la~~~~---~~~gi~v~~v~PG~v~~t 222 (308)
T PLN00015 179 F----DGAKAYKDSKVCNMLTMQEFHRRYH---EETGITFASLYPGCIATT 222 (308)
T ss_pred C----cHHHHHhHhHHHHHHHHHHHHHhhc---ccCCeEEEEecCCcccCc
Confidence 1 1246899999986666565543210 124799999999999643
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.93 Score=43.36 Aligned_cols=138 Identities=8% Similarity=-0.009 Sum_probs=83.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++.+++... .-.++|.+||..... ..|. ....|+.||+..+.+.+...
T Consensus 143 e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~----------~~p~-----~~~~Y~asKaAl~~lt~~la 207 (299)
T PRK06300 143 KGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMR----------AVPG-----YGGGMSSAKAALESDTKVLA 207 (299)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcC----------cCCC-----ccHHHHHHHHHHHHHHHHHH
Confidence 356778899999999999999764 224789898865311 1110 01379999999999888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.+.. ...|+++..+.|+.|--+-.... ............+ ...+...+|++.++..++...
T Consensus 208 ~el~---~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~peevA~~v~~L~s~~----- 270 (299)
T PRK06300 208 WEAG---RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAP---------LPEPMEAEQVGAAAAFLVSPL----- 270 (299)
T ss_pred HHhC---CCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcc-----
Confidence 3210 11489999999988754321110 0111111111111 012456899999998876410
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.++
T Consensus 271 ----~~~itG~~i~vdGG 284 (299)
T PRK06300 271 ----ASAITGETLYVDHG 284 (299)
T ss_pred ----ccCCCCCEEEECCC
Confidence 23456888777655
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.28 Score=47.88 Aligned_cols=78 Identities=17% Similarity=0.178 Sum_probs=57.9
Q ss_pred hhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 11 RVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
....+..+-+-+|+++.. +.+.|++|.++|.+. +--+ +..+|-++|..-|+-+.....
T Consensus 224 ~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~----------~~~s-------~~f~Yfk~K~~LE~dl~~~l~- 285 (410)
T PF08732_consen 224 ARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNN----------NAIS-------SMFPYFKTKGELENDLQNLLP- 285 (410)
T ss_pred chhhccccccHHHHHHhhhhhccCCCceEEEEEecCc----------chhh-------hhhhhhHHHHHHHHHHHhhcc-
Confidence 344566666777777777 778999999999874 1111 157899999999999988752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE 112 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~ 112 (389)
..--..+|+|||-+.|..++
T Consensus 286 ------~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 286 ------PKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred ------cccceEEEecCccccCCCCC
Confidence 11236899999999998665
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.62 E-value=1.1 Score=39.95 Aligned_cols=130 Identities=20% Similarity=0.231 Sum_probs=85.4
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHc----CC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHH--------
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEF----GI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGR-------- 71 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~----gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~-------- 71 (389)
+.|.+.++++|..|+-.+-+++.+. +- -++|.+||+- |...+ . ..+.|+.
T Consensus 111 q~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIV---GkiGN-~------------GQtnYAAsK~GvIgf 174 (256)
T KOG1200|consen 111 QEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIV---GKIGN-F------------GQTNYAASKGGVIGF 174 (256)
T ss_pred HHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhh---ccccc-c------------cchhhhhhcCceeee
Confidence 4678899999999999998888765 11 2899999963 21111 0 1244544
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 72 SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
||..|-++.+ .++++-++-|+.|--|-....=+.+++.+..+-+.-..|+ .+|+|..+.
T Consensus 175 tktaArEla~------------knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~---------~EevA~~V~ 233 (256)
T KOG1200|consen 175 TKTAARELAR------------KNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGE---------AEEVANLVL 233 (256)
T ss_pred eHHHHHHHhh------------cCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCC---------HHHHHHHHH
Confidence 4555555433 4589999999999777554444677777777665555554 567777777
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.++.. + ..-..|+.+.+.+|-
T Consensus 234 fLAS~---~------ssYiTG~t~evtGGl 254 (256)
T KOG1200|consen 234 FLASD---A------SSYITGTTLEVTGGL 254 (256)
T ss_pred HHhcc---c------cccccceeEEEeccc
Confidence 66531 1 344567888877663
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.42 Score=45.42 Aligned_cols=82 Identities=23% Similarity=0.245 Sum_probs=58.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++....++|..|+..+-.+.... --.|+|++||.+. .-..|. ..+|..||...|......
T Consensus 129 ~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G----------R~~~p~------~g~Y~~SK~aVeaf~D~l 192 (322)
T KOG1610|consen 129 EDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG----------RVALPA------LGPYCVSKFAVEAFSDSL 192 (322)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc----------CccCcc------cccchhhHHHHHHHHHHH
Confidence 577889999999988777776432 2349999999662 222221 589999999999776655
Q ss_pred CCCCCCCCCCCCceEEEEecCceecC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
... -+..|++++++-|| +|-.
T Consensus 193 R~E----L~~fGV~VsiiePG-~f~T 213 (322)
T KOG1610|consen 193 RRE----LRPFGVKVSIIEPG-FFKT 213 (322)
T ss_pred HHH----HHhcCcEEEEeccC-cccc
Confidence 321 13479999999999 5544
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.76 Score=44.29 Aligned_cols=96 Identities=24% Similarity=0.158 Sum_probs=63.1
Q ss_pred CcchhhhHhhhhHHHHHHHH----HHHcCCCeEEEecCCceecCCc--ccCCCCCCCC-CCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEA----CLEFGIQRLVYVSTYNVVFGGK--EIVNGNESLP-YFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~a----a~~~gvkrlV~~SS~~vvyg~~--~~~~~~E~~p-~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
...|..+++|..|...+.+. ++.....|+|.+||... +.. ......|... +.. ...|+.||..-...
T Consensus 134 DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~--~~~~~~~~l~~~~~~~~~~----~~~Y~~SKla~~l~ 207 (314)
T KOG1208|consen 134 DGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG--GGKIDLKDLSGEKAKLYSS----DAAYALSKLANVLL 207 (314)
T ss_pred cchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc--cCccchhhccchhccCccc----hhHHHHhHHHHHHH
Confidence 46788899999986655544 55554479999999762 111 1111112221 221 23599999999888
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCC
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER 113 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~ 113 (389)
..+..++. ..|+.+..+.||.|..++-.+
T Consensus 208 ~~eL~k~l-----~~~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 208 ANELAKRL-----KKGVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred HHHHHHHh-----hcCceEEEECCCcccccceec
Confidence 88876542 128999999999998875554
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=90.81 E-value=0.5 Score=57.43 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=64.3
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+.++++++|+.|+.++++++.....+++|.+||...+||.. ....|+.+|...+.+......
T Consensus 2142 ~e~f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~----------------gqs~YaaAkaaL~~la~~la~ 2205 (2582)
T TIGR02813 2142 LEEFNAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNT----------------GQSDYAMSNDILNKAALQLKA 2205 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCC----------------CcHHHHHHHHHHHHHHHHHHH
Confidence 3567789999999999999999888778999999988766521 146799999998887776653
Q ss_pred CCCCCCCCCCceEEEEecCceecC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGP 109 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp 109 (389)
+ ..+.++..+.|+.+=|+
T Consensus 2206 ~------~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2206 L------NPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred H------cCCcEEEEEECCeecCC
Confidence 1 23578999999877553
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.94 E-value=5 Score=36.61 Aligned_cols=124 Identities=17% Similarity=0.168 Sum_probs=79.0
Q ss_pred hhhhHhhhhHHHHHHHHHH----HcCC-----------CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACL----EFGI-----------QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKS 74 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~----~~gv-----------krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~ 74 (389)
-..+++|+.|+..+.+++. +..- ..+|++||.+. + .......+ ..+|.+||+
T Consensus 110 ~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~---s------~~~~~~~~----~~AYrmSKa 176 (249)
T KOG1611|consen 110 LEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG---S------IGGFRPGG----LSAYRMSKA 176 (249)
T ss_pred HHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc---c------cCCCCCcc----hhhhHhhHH
Confidence 4568899999988887763 2222 26888999763 2 11111112 689999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 75 VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 75 ~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
+.-...++..-+ + +..++-++.+.||.|==.- |. .-.-+.+++-+..++..+
T Consensus 177 AlN~f~ksls~d-L---~~~~ilv~sihPGwV~TDM---------------------gg---~~a~ltveeSts~l~~~i 228 (249)
T KOG1611|consen 177 ALNMFAKSLSVD-L---KDDHILVVSIHPGWVQTDM---------------------GG---KKAALTVEESTSKLLASI 228 (249)
T ss_pred HHHHHHHHhhhh-h---cCCcEEEEEecCCeEEcCC---------------------CC---CCcccchhhhHHHHHHHH
Confidence 998888876532 2 3467889999999883110 11 123467888888888888
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
..|. +...|. |+--++.++.
T Consensus 229 ~kL~---------~~hnG~-ffn~dlt~ip 248 (249)
T KOG1611|consen 229 NKLK---------NEHNGG-FFNRDGTPIP 248 (249)
T ss_pred HhcC---------cccCcc-eEccCCCcCC
Confidence 8763 344565 4444555543
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.26 E-value=1.3 Score=40.80 Aligned_cols=106 Identities=13% Similarity=0.109 Sum_probs=67.6
Q ss_pred hhhhHhhhhHHHHHHHHH----HHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 10 GRVDEVNINGTCHVIEAC----LEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa----~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+.++|+.++.+++.++ .+.+ -.++|++||.....+ .+ ....|+.||+..+.+.....
T Consensus 102 ~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~----------~~------~~~~Y~asKaa~~~~~~~la 165 (246)
T PRK05599 102 VEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA----------RR------ANYVYGSTKAGLDAFCQGLA 165 (246)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC----------Cc------CCcchhhHHHHHHHHHHHHH
Confidence 345677888877665554 3332 358999999764211 11 14689999999888887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... .+.++.+..+.|+.|..+-.. +.. . .+ .....+|+|++++.++.
T Consensus 166 ~el----~~~~I~v~~v~PG~v~T~~~~------------~~~-~---~~----~~~~pe~~a~~~~~~~~ 212 (246)
T PRK05599 166 DSL----HGSHVRLIIARPGFVIGSMTT------------GMK-P---AP----MSVYPRDVAAAVVSAIT 212 (246)
T ss_pred HHh----cCCCceEEEecCCcccchhhc------------CCC-C---CC----CCCCHHHHHHHHHHHHh
Confidence 321 236799999999988643111 100 0 00 01467999999999986
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.64 E-value=1.6 Score=41.72 Aligned_cols=82 Identities=12% Similarity=0.035 Sum_probs=55.5
Q ss_pred chhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
....+++|+.++..+.+++... +-.++|.+||..+.++. .+.. ....|+.||+..+.+.+...
T Consensus 124 ~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~---------~~~~----~~~~Y~asKaal~~lt~~La 190 (305)
T PRK08303 124 GLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNA---------THYR----LSVFYDLAKTSVNRLAFSLA 190 (305)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccC---------cCCC----CcchhHHHHHHHHHHHHHHH
Confidence 4456788999988888777643 33589999986532211 0111 13579999999998887664
Q ss_pred CCCCCCCCCCCceEEEEecCcee
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIY 107 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~Iy 107 (389)
.+. ...|+++..+.|+.|-
T Consensus 191 ~el----~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 191 HEL----APHGATAVALTPGWLR 209 (305)
T ss_pred HHh----hhcCcEEEEecCCccc
Confidence 321 2368999999998774
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=88.46 E-value=1.1 Score=41.04 Aligned_cols=79 Identities=27% Similarity=0.317 Sum_probs=56.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC--eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ--RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk--rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+..+.+++... .+ ++|.+||.... .. +.. ...|+.||+..+.+.....
T Consensus 109 ~~~~~~~~~n~~g~~~~~~~~~~~-~~~~~Iv~isS~~~~-~~----------~~~-----~~~Y~~sK~al~~~~~~l~ 171 (251)
T COG1028 109 EDWDRVIDVNLLGAFLLTRAALPL-MKKQRIVNISSVAGL-GG----------PPG-----QAAYAASKAALIGLTKALA 171 (251)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHh-hhhCeEEEECCchhc-CC----------CCC-----cchHHHHHHHHHHHHHHHH
Confidence 467788999999999988844432 22 89999998741 11 100 2689999999998887765
Q ss_pred CCCCCCCCCCCceEEEEecCce
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAI 106 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~I 106 (389)
.+ ....|+.+..+-|+.+
T Consensus 172 ~e----~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 172 LE----LAPRGIRVNAVAPGYI 189 (251)
T ss_pred HH----HhhhCcEEEEEEeccC
Confidence 21 1235799999999944
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=88.08 E-value=1.3 Score=40.35 Aligned_cols=119 Identities=13% Similarity=0.060 Sum_probs=80.3
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHc--CC---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEF--GI---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~--gv---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
..+.+.+++.|+.+...+...|... +. +-+|++||..+| .|+. +...|+.+|+.-+.+.
T Consensus 106 ~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav------------~p~~----~wa~yc~~KaAr~m~f 169 (253)
T KOG1204|consen 106 SDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV------------RPFS----SWAAYCSSKAARNMYF 169 (253)
T ss_pred HHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh------------cccc----HHHHhhhhHHHHHHHH
Confidence 3567889999999988888877654 22 568999998863 2222 2689999999999999
Q ss_pred HHhCCCCCCCCCCC-CceEEEEecCceecCC------CCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 81 LKSNGRPFKKNNRK-CLYTCAVRPAAIYGPG------EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 81 ~~~~~~~~~~~~~~-gl~~~ilRp~~IyGp~------~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
..... +++ ++.+..++||.|=-+. +.++.|....+.+..+. .-+.+...+.++.+...
T Consensus 170 ~~lA~------EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~---------~~~ll~~~~~a~~l~~L 234 (253)
T KOG1204|consen 170 MVLAS------EEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKE---------SGQLLDPQVTAKVLAKL 234 (253)
T ss_pred HHHhh------cCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHh---------cCCcCChhhHHHHHHHH
Confidence 88764 333 8899999998763221 11344544444443321 12356667777888777
Q ss_pred Hh
Q 016468 154 SM 155 (389)
Q Consensus 154 ~~ 155 (389)
.+
T Consensus 235 ~e 236 (253)
T KOG1204|consen 235 LE 236 (253)
T ss_pred HH
Confidence 76
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=87.67 E-value=1 Score=38.26 Aligned_cols=62 Identities=27% Similarity=0.306 Sum_probs=49.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.++.+++|+.++.++.+++...+-.++|++||.....| .| ....|+.||+..+.++....
T Consensus 102 ~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------~~------~~~~Y~askaal~~~~~~la 163 (167)
T PF00106_consen 102 EELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRG----------SP------GMSAYSASKAALRGLTQSLA 163 (167)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSS----------ST------TBHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccccceeeeeeehheeccccceEEecchhhccC----------CC------CChhHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999876779999999875221 11 14799999999999988764
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.25 E-value=1.7 Score=40.86 Aligned_cols=144 Identities=17% Similarity=0.077 Sum_probs=85.7
Q ss_pred cCcchhhhHhhhhH-HHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNING-TCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 6 ~~~~~~~~~vNv~g-t~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
...++.+.++|+.| +.++.++|..+ +-..++++||...+ ...+.. ...|+.||..-+++.
T Consensus 111 ~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~----------~~~~~~-----~~~Y~~sK~al~~lt 175 (270)
T KOG0725|consen 111 EEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV----------GPGPGS-----GVAYGVSKAALLQLT 175 (270)
T ss_pred HHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc----------cCCCCC-----cccchhHHHHHHHHH
Confidence 35678889999995 66666666543 44579999987641 111111 168999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcC--CCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLG--LVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g--~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
+...... .+.|+++.++=|+.|..+-.... ...-.....+. ..... ..-.+.-.+|++.++...+..
T Consensus 176 r~lA~El----~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-----p~gr~g~~~eva~~~~fla~~- 245 (270)
T KOG0725|consen 176 RSLAKEL----AKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAV-----PLGRVGTPEEVAEAAAFLASD- 245 (270)
T ss_pred HHHHHHH----hhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcccccc-----ccCCccCHHHHHHhHHhhcCc-
Confidence 9875322 34689999999999987752111 00000111111 00000 112356688988888877641
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+ ..-..|+.+.+.+|..
T Consensus 246 --~------asyitG~~i~vdgG~~ 262 (270)
T KOG0725|consen 246 --D------ASYITGQTIIVDGGFT 262 (270)
T ss_pred --c------cccccCCEEEEeCCEE
Confidence 0 1245677776665543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=86.80 E-value=1.6 Score=41.27 Aligned_cols=61 Identities=23% Similarity=0.273 Sum_probs=44.4
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+...++++|+.|+..+-+++. +.+-.++|.+||... ....|. .+.|+.||++.+.+...+
T Consensus 114 ~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG----------~~~~P~------~~~Y~ASK~Al~~f~etL 177 (282)
T KOG1205|consen 114 DVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG----------KMPLPF------RSIYSASKHALEGFFETL 177 (282)
T ss_pred HHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc----------ccCCCc------ccccchHHHHHHHHHHHH
Confidence 455688999999877777774 445569999999764 112222 358999999999887766
Q ss_pred C
Q 016468 84 N 84 (389)
Q Consensus 84 ~ 84 (389)
.
T Consensus 178 R 178 (282)
T KOG1205|consen 178 R 178 (282)
T ss_pred H
Confidence 4
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=86.56 E-value=0.27 Score=42.66 Aligned_cols=97 Identities=22% Similarity=0.208 Sum_probs=56.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH--------cCCCe--EEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE--------FGIQR--LVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~--------~gvkr--lV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.++++++|+.||-|+++.... .+-.| +|.+.|..+ |.++.. ...|+.||...
T Consensus 111 edfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaa-fdgq~g---------------qaaysaskgai 174 (260)
T KOG1199|consen 111 EDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAA-FDGQTG---------------QAAYSASKGAI 174 (260)
T ss_pred HHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeee-ecCccc---------------hhhhhcccCce
Confidence 47788999999999999987642 11122 566666663 554432 47888888754
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL 124 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~ 124 (389)
--+.+-..++ -.+.|++++.+-|+.. +..--..+|.-++....
T Consensus 175 vgmtlpiard----la~~gir~~tiapglf-~tpllsslpekv~~fla 217 (260)
T KOG1199|consen 175 VGMTLPIARD----LAGDGIRFNTIAPGLF-DTPLLSSLPEKVKSFLA 217 (260)
T ss_pred Eeeechhhhh----cccCceEEEeeccccc-CChhhhhhhHHHHHHHH
Confidence 3332222211 1347899999998754 32222234444444433
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=85.89 E-value=0.97 Score=39.65 Aligned_cols=75 Identities=16% Similarity=0.241 Sum_probs=59.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+...+.-+.|+.||.++.....++.+|..||...++|+.. ...|+..-...|.+......
T Consensus 103 ~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g----------------q~~YaaAN~~lda~a~~~~~- 165 (181)
T PF08659_consen 103 DEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG----------------QSAYAAANAFLDALARQRRS- 165 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT----------------BHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc----------------hHhHHHHHHHHHHHHHHHHh-
Confidence 3456677888999999999999999999999999998777532 47899998888888877642
Q ss_pred CCCCCCCCCceEEEEecCc
Q 016468 87 PFKKNNRKCLYTCAVRPAA 105 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~ 105 (389)
.|.++++|.-+.
T Consensus 166 -------~g~~~~sI~wg~ 177 (181)
T PF08659_consen 166 -------RGLPAVSINWGA 177 (181)
T ss_dssp -------TTSEEEEEEE-E
T ss_pred -------CCCCEEEEEccc
Confidence 578888887653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=85.28 E-value=8.9 Score=38.38 Aligned_cols=98 Identities=16% Similarity=0.071 Sum_probs=57.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CC---C-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GI---Q-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gv---k-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
+.+..+++|+.|+.++++++... +. + .+|.+|+.. + .+ + ....|+.||+..+.+
T Consensus 265 ~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~------------~~--~---~~~~Y~ASKaAl~~l 326 (406)
T PRK07424 265 AINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V------------NP--A---FSPLYELSKRALGDL 326 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c------------cC--C---CchHHHHHHHHHHHH
Confidence 55778999999999999998642 21 2 244444321 1 11 1 024699999999886
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..-... ..+..+..+.| ||-.+.. + ....+..||+|+.++.+++
T Consensus 327 ~~l~~~-------~~~~~I~~i~~----gp~~t~~----------~-----------~~~~~spe~vA~~il~~i~ 370 (406)
T PRK07424 327 VTLRRL-------DAPCVVRKLIL----GPFKSNL----------N-----------PIGVMSADWVAKQILKLAK 370 (406)
T ss_pred HHHHHh-------CCCCceEEEEe----CCCcCCC----------C-----------cCCCCCHHHHHHHHHHHHH
Confidence 532211 12233333333 4422211 0 0123678999999999987
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.81 E-value=5.5 Score=36.71 Aligned_cols=107 Identities=16% Similarity=0.100 Sum_probs=60.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+.+..+++|+.|+.++++++...- -..++..||... . .+. . ...|+.||+..+.+
T Consensus 98 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~-~-----------~~~-~----~~~Y~aSKaal~~~ 160 (245)
T PRK12367 98 ENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE-I-----------QPA-L----SPSYEISKRLIGQL 160 (245)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc-c-----------CCC-C----CchhHHHHHHHHHH
Confidence 4667889999999999999986531 122434444321 1 010 1 35799999987543
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
. .+......+....++.+..+.|+.+..+ . .. ...+..+|+|+.++.+++.
T Consensus 161 ~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~----~----------~~-----------~~~~~~~~vA~~i~~~~~~ 211 (245)
T PRK12367 161 V-SLKKNLLDKNERKKLIIRKLILGPFRSE----L----------NP-----------IGIMSADFVAKQILDQANL 211 (245)
T ss_pred H-HHHHHHHHhhcccccEEEEecCCCcccc----c----------Cc-----------cCCCCHHHHHHHHHHHHhc
Confidence 2 1110000001235677788888654221 0 00 0135678888888888763
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=84.13 E-value=2.5 Score=40.07 Aligned_cols=115 Identities=14% Similarity=0.088 Sum_probs=73.6
Q ss_pred CcchhhhHhhhhHH----HHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGT----CHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt----~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
..-+..+++|+.|. ++.+-.+.+.+-.++|-++|....+|. + ....|+.||..+.-.-.+
T Consensus 136 ~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~----------~------gl~~YcaSK~a~vGfhes 199 (300)
T KOG1201|consen 136 EEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP----------A------GLADYCASKFAAVGFHES 199 (300)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC----------c------cchhhhhhHHHHHHHHHH
Confidence 34567888999885 455566677777799999998754331 1 147899999998755444
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... .+.+....|++++.+-|..+= + .++.. +.+. ......+..+.+|+.++.++.
T Consensus 200 L~~-EL~~~~~~~IktTlv~P~~i~----T----gmf~~--~~~~-------~~l~P~L~p~~va~~Iv~ai~ 254 (300)
T KOG1201|consen 200 LSM-ELRALGKDGIKTTLVCPYFIN----T----GMFDG--ATPF-------PTLAPLLEPEYVAKRIVEAIL 254 (300)
T ss_pred HHH-HHHhcCCCCeeEEEEeeeecc----c----cccCC--CCCC-------ccccCCCCHHHHHHHHHHHHH
Confidence 321 111223467999999987662 1 11111 1111 123457888999999999987
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=83.26 E-value=1.1 Score=38.99 Aligned_cols=132 Identities=18% Similarity=0.216 Sum_probs=79.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.++++.+++|+.+..++.+...+ .++ ..+|.+||.+.. .|.+. .+.|..||+.-+.+.+
T Consensus 99 q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~---------------R~~~n-HtvYcatKaALDmlTk 162 (245)
T KOG1207|consen 99 QSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI---------------RPLDN-HTVYCATKAALDMLTK 162 (245)
T ss_pred HhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc---------------cccCC-ceEEeecHHHHHHHHH
Confidence 45678899999999998888544 333 258899997741 11112 4789999999887766
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...-.- ....+++-.+.|..|.-.-.... ...++..+- .--|.-||.++.|+..++.
T Consensus 163 ~lAlEL----Gp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riP-------------l~rFaEV~eVVnA~lfLLS 225 (245)
T KOG1207|consen 163 CLALEL----GPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIP-------------LKRFAEVDEVVNAVLFLLS 225 (245)
T ss_pred HHHHhh----CcceeEeeccCCeEEEecccccccCCchhccchhhhCc-------------hhhhhHHHHHHhhheeeee
Confidence 543211 23568888999998865422111 111222111 1136678888888877653
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
| +..-..|...-+.+|
T Consensus 226 ----d-----~ssmttGstlpveGG 241 (245)
T KOG1207|consen 226 ----D-----NSSMTTGSTLPVEGG 241 (245)
T ss_pred ----c-----CcCcccCceeeecCC
Confidence 1 133345655555444
|
|
| >PRK10910 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=80.35 E-value=12 Score=28.84 Aligned_cols=75 Identities=20% Similarity=0.171 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHhcCC--CCCchhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccchhhH--HHHHH
Q 016468 298 FCLIGLPALFATAYLPD--IGPVPILRTIGLFIFKSMWMMRLAFAIAVSAHVSEGVFAWCLAKKVDPANAKGW--FWQTL 373 (389)
Q Consensus 298 ~~~~~~~~~~~~~~lp~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 373 (389)
..+.+++..++|.++=. +.| |.+.+..+ +-+...+-.+.|..|-+.---..++-- ....| -+|.|
T Consensus 3 i~lGk~l~l~vW~~ll~NL~~P--Fp~pl~~~-------l~ia~~f~~~MH~lQ~llf~~~~~k~~--~~l~~~d~~~If 71 (89)
T PRK10910 3 INLGRLLMLCVWGFLILNLVHP--FPRPLNIF-------VNVALIFMVLMHGLQLALLKSTQPKDG--PQLSGLEQVRIF 71 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHccc--CCchHHHH-------HHHHHHHHHHHHHHHHHHHHhhccccC--cCCCHhHHHHHH
Confidence 44556666677766622 333 33333332 333345556789999765433332222 21333 47889
Q ss_pred HHhhhhHHHH
Q 016468 374 ALGVFSLRLL 383 (389)
Q Consensus 374 ~~~~~~~~~~ 383 (389)
+||+++|-=.
T Consensus 72 lFGVF~Ll~~ 81 (89)
T PRK10910 72 LFGVFELLAW 81 (89)
T ss_pred HHHHHHHHHH
Confidence 9999997543
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.26 E-value=7 Score=36.67 Aligned_cols=116 Identities=14% Similarity=0.064 Sum_probs=71.4
Q ss_pred CcchhhhHhhhhHHHHHHH----HHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIE----ACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~----aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+-+..+++|+.++..+-. -..+.+-.++|.++|... |- ..|+ ...|+.||+..--+-..
T Consensus 106 ~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag-~~---------p~p~------~avY~ATKa~v~~fSea 169 (265)
T COG0300 106 DEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAG-LI---------PTPY------MAVYSATKAFVLSFSEA 169 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhh-cC---------CCcc------hHHHHHHHHHHHHHHHH
Confidence 3456788999988655544 445666778999999875 21 1122 57999999875433333
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... -++.|+++..+-|+.+.-+-.+ . ++..... . ....-++..+|+|++.+.+++
T Consensus 170 L~~E----L~~~gV~V~~v~PG~~~T~f~~---------~-~~~~~~~-~--~~~~~~~~~~~va~~~~~~l~ 225 (265)
T COG0300 170 LREE----LKGTGVKVTAVCPGPTRTEFFD---------A-KGSDVYL-L--SPGELVLSPEDVAEAALKALE 225 (265)
T ss_pred HHHH----hcCCCeEEEEEecCcccccccc---------c-ccccccc-c--cchhhccCHHHHHHHHHHHHh
Confidence 2210 1457999999999766532111 0 1110000 0 112347889999999999987
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 389 | ||||
| 1r6d_A | 337 | Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc | 3e-05 | ||
| 1r66_A | 337 | Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr | 1e-04 |
| >pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337 | Back alignment and structure |
|
| >pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 1e-46
Identities = 39/271 (14%), Positives = 90/271 (33%), Gaps = 34/271 (12%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ T ACL+ + R++YV + + + + G+E L Y + SY K
Sbjct: 100 ASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCK 159
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIG 132
++ + P + G + R+++ G + +
Sbjct: 160 WALDEQAREQARNGLP--------VVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVA 211
Query: 133 EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPL 192
+ + I L++A ++GR G+ Y ++ G + + +
Sbjct: 212 ---GQRNVIDAAEAGRGLLMA---------LERGRI---GERYLLT-GHNLEMADLTRRI 255
Query: 193 LKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYF 252
+ L P+ + A+ + L R PL+ + + +
Sbjct: 256 AELLGQPAPQP---MSMAMA------RALATLGRLRYRVSGQLPLLDETAIEVMAGGQFL 306
Query: 253 SLLKAKDELCYVPIVSPREGMAATISYWQDR 283
KA++EL + + + + I +++D
Sbjct: 307 DGRKAREELGFFSTTALDDTLLRAIDWFRDN 337
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 6e-15
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 33/154 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVD-----S 68
+VN+NGT +++EA + ++++V ST VFG P +
Sbjct: 86 KVNMNGTYNILEAAKQHRVEKVVIPST-IGVFGP--------ETPKNKVPSITITRPRTM 136
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGPGEERH------LPRIV 119
+G +K AE L + ++R I E I
Sbjct: 137 FGVTKIAAELLG----------QYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIF 186
Query: 120 SLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153
A P+ +Y+ + + AL+
Sbjct: 187 YYAVKREKYKCYLAPNRALPMMYMPDALKALVDL 220
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 8e-14
Identities = 37/283 (13%), Positives = 73/283 (25%), Gaps = 78/283 (27%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE-HVDS---- 68
N T ++ +AC E I +VY ST + P +E +
Sbjct: 83 HDNEILTQNLYDACYENNISNIVYAST-ISAYS---------DETSLPWNEKELPLPDLM 132
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGPGEERH---LPRIVSLA 122
YG SK E + + + +R A +YG E++ + R A
Sbjct: 133 YGVSKLACEHIG-----NIYSR-----KKGLCIKNLRFAHLYGFN-EKNNYMINRFFRQA 181
Query: 123 KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182
G K +++Y + ++I A ++ + + + G
Sbjct: 182 FHGEQLTLHANSVAKREFLYAKDAAKSVIYAL---------KQEKV---SGTFNIGSGDA 229
Query: 183 INTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 242
+ +E + P
Sbjct: 230 LTNYEVANTINNAFGNKDNL---------------------------LVKNPNA---NEG 259
Query: 243 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285
++ Y KAK+ L + + + +
Sbjct: 260 IHS----SYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDD 298
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 67.5 bits (166), Expect = 9e-13
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 30/155 (19%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS----- 68
EVN+ G +++EAC ++G+++LV+ ST ++G E +E
Sbjct: 91 EVNLLGGLNLLEACRQYGVEKLVFASTGGAIYG--------EVPEGERAEETWPPRPKSP 142
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKL 124
Y SK+ E L G+ + L ++R +YGP + E + I + L
Sbjct: 143 YAASKAAFEHY-LSVYGQSYG------LKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVL 195
Query: 125 GLVPFKIGEPSVKT------DWIYVDNLVLALILA 153
+P + D++YV ++ A LA
Sbjct: 196 KGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALA 230
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 41/282 (14%), Positives = 79/282 (28%), Gaps = 88/282 (31%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE-----HVDS 68
N G +V++A + + R VY T + +G K P+ +S
Sbjct: 111 LTNCVGGSNVVQAAKKNNVGRFVYFQT-ALCYGVKP--------IQQPVRLDHPRNPANS 161
Query: 69 -YGRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGP-GEERHLPRIVSLAK 123
Y SKS E + R A + GP LP
Sbjct: 162 SYAISKSANEDYLE--------------YSGLDFVTFRLANVVGPRNVSGPLPIFFQRLS 207
Query: 124 LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPI 183
G + + D+++V +L A + A +D + Y S G +
Sbjct: 208 EGK-KCFVTKAR--RDFVFVKDLARATVRA----VDGVG---------HGAYHFSSGTDV 251
Query: 184 NTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA-- 241
E +++ + P+P I
Sbjct: 252 AIKELYDAVVEAMALPSY--------------------------------PEPEIRELGP 279
Query: 242 -EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282
+ + + + + +E +AA ++Y+++
Sbjct: 280 DDAPSI----LLDPSRTIQDFGKIEFTPLKETVAAAVAYFRE 317
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 64.1 bits (157), Expect = 1e-11
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS-YGRS 72
N+ T ++EA + G+ R+V+ ST + V+G +++ E P PI S YG S
Sbjct: 88 RNNVLATYRLLEAMRKAGVSRIVFTST-STVYGEAKVIPTPEDYPTHPI-----SLYGAS 141
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP-GEERHLPRIVSLAKLGLVPFKI 131
K E L ++S F + R A + G + + K +I
Sbjct: 142 KLACEAL-IESYCHTFD------MQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEI 194
Query: 132 ---GEPSVKTDWIYVDNLVLALILA 153
GE K +IY+ + V A++
Sbjct: 195 LGNGEQ-NK-SYIYISDCVDAMLFG 217
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 63.4 bits (155), Expect = 2e-11
Identities = 45/286 (15%), Positives = 85/286 (29%), Gaps = 80/286 (27%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVST---YNVVFGGKEIVNGNESLPYFPIDE-HVDS- 68
NI+G +++ A + +Q Y ++ Y G+ P P E +
Sbjct: 127 ATNIDGFLNMLIAARDAKVQSFTYAASSSTY-----------GDH--PGLPKVEDTIGKP 173
Query: 69 ---YGRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGPGEERH------LP 116
Y +K V E F + Y T +R ++G ++ + +P
Sbjct: 174 LSPYAVTKYVNELYA-----DVFSR-----CYGFSTIGLRYFNVFGRRQDPNGAYAAVIP 223
Query: 117 RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYF 176
+ S G + G+ D+ Y++N V A +LA+ A Q Y
Sbjct: 224 KWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA----------TAGLDARNQVYN 273
Query: 177 VSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236
++ G + + L L + + +
Sbjct: 274 IAVGGRTSLNQLFFALRDGLAENGVSYHREPVYR---------------D-------FR- 310
Query: 237 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282
+V + KA L Y P G+A + ++
Sbjct: 311 ---EGDVRH----SLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 349
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 4e-11
Identities = 34/163 (20%), Positives = 50/163 (30%), Gaps = 30/163 (18%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS----- 68
N+ GT +I L ++ YVST V E E I
Sbjct: 188 GPNVAGTAELIRIALTTKLKPFTYVST-ADVGAAIEPSAFTEDADIRVISPTRTVDGGWA 246
Query: 69 --YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-------HLPRIV 119
YG SK E L+ ++ N+ L R I + R+V
Sbjct: 247 GGYGTSKWAGEVLLREA-------NDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMV 299
Query: 120 -SLAKLGLVPFKIGEPSVKT-------DWIYVDNLVLALILAS 154
SL G+ P EP + D + V + A+ +
Sbjct: 300 LSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLG 342
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 8e-11
Identities = 42/282 (14%), Positives = 82/282 (29%), Gaps = 83/282 (29%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE-HVDS----Y 69
N++ H++ C G+ ++V ST V+G P E S Y
Sbjct: 94 DNVDSGRHLLALCTSVGVPKVVVGST-CEVYG---------QADTLPTPEDSPLSPRSPY 143
Query: 70 GRSKSVAEQLVL---KSNGRPFKKNNRKCLYTCAVRPAAIYGPG--EERHLPRIVSLAKL 124
SK E + +++ P VR +YGPG + +PR+ +
Sbjct: 144 AASKVGLEMVAGAHQRASVAP---------EVGIVRFFNVYGPGERPDALVPRLCANLLT 194
Query: 125 GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184
G+ + D+ Y+ ++V L+ + G ++
Sbjct: 195 RNELPVEGDGEQRRDFTYITDVVDKLVALANR-------------PLPSVVNFGSGQSLS 241
Query: 185 TFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244
+ I +L+ + P+P
Sbjct: 242 VNDVIR-ILQATSPAAEVARKQ---------------------------PRP-------- 265
Query: 245 KVG-VTHYF-SLLKAKDELCYVPI-VSPREGMAATISYWQDR 283
+T + ++ + EG+ T+ +WQ R
Sbjct: 266 --NEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSR 305
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 2e-10
Identities = 34/149 (22%), Positives = 63/149 (42%), Gaps = 28/149 (18%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS-YGRS 72
N+ T +V+E + G++ +V+ S+ + V+G +++ E PY PI S YG +
Sbjct: 87 NENVVATFNVLEWARQTGVRTVVFASS-STVYGDADVIPTPEEEPYKPI-----SVYGAA 140
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE-----ERHLPRIVSLAKLGLV 127
K+ E + + R F + AVR A + GP + + +
Sbjct: 141 KAAGEVM-CATYARLFG------VRCLAVRYANVVGPRLRHGVIYDFIMK----LRRNPN 189
Query: 128 PFKI---GEPSVKTDWIYVDNLVLALILA 153
++ G K ++YV + V A + A
Sbjct: 190 VLEVLGDGT-QRK-SYLYVRDAVEATLAA 216
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 4e-10
Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 27/145 (18%)
Query: 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGR 71
+ + I +I+ + G+ R + V +F + L + +
Sbjct: 84 IYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLF-----IAPGLRLMDSG-EVPENILPG 137
Query: 72 SKSVAEQL---VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP 128
K++ E ++K + PAA PG R + + +
Sbjct: 138 VKALGEFYLNFLMKEKEIDW----------VFFSPAADMRPG-VRTGRYRLGKDDMIVDI 186
Query: 129 FKIGEPSVKTDWIYVDNLVLALILA 153
I V++ A+I
Sbjct: 187 VGNS-------HISVEDYAAAMIDE 204
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 6e-10
Identities = 35/148 (23%), Positives = 50/148 (33%), Gaps = 32/148 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHV----DS- 68
+ NI G ++ EA G R+V+ S+ N G ID V DS
Sbjct: 84 QANIIGAYNLYEAARNLGKPRIVFASS-NHTIGYYP--------RTTRIDTEVPRRPDSL 134
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP-GEERHLPRIVS------L 121
YG SK E L F + T +R + + + R + +S L
Sbjct: 135 YGLSKCFGEDL-ASLYYHKFD------IETLNIRIGSCFPKPKDARMMATWLSVDDFMRL 187
Query: 122 AKLGLVPFKIGEPSV----KTDWIYVDN 145
K V K+G V + DN
Sbjct: 188 MKRAFVAPKLGCTVVYGASANTESWWDN 215
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 7e-10
Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 34/188 (18%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ G + + A +Q + +VS+ V+G + +E P D G+
Sbjct: 83 LSYVEGLRNTLSALEGAPLQHVFFVSSTG-VYGQEVEEWLDEDTPPIAKDF----SGKRM 137
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE 133
AE L+ + +R + IYGPG R + + P +
Sbjct: 138 LEAEALLAA-------------YSSTILRFSGIYGPGRLR-------MIRQAQTPEQWPA 177
Query: 134 PSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLL 193
+ T+ I+ D+ + + + Y V+D P+ + + L
Sbjct: 178 RNAWTNRIHRDDGAAFIAYL----IQQRSHAVPERL-----YIVTDNQPLPVHDLLRWLA 228
Query: 194 KTLDYDLP 201
P
Sbjct: 229 DRQGIAYP 236
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 8e-10
Identities = 28/138 (20%), Positives = 41/138 (29%), Gaps = 23/138 (16%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHV-----DS 68
+ NI G ++ EA G R+V+ S+ N G + V
Sbjct: 85 QGNIIGLYNLYEAARAHGQPRIVFASS-NHTIGYYP--------QTERLGPDVPARPDGL 135
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYG-PGEERHLPRIVSLAKLG-L 126
YG SK E L + F T VR + P R L S L
Sbjct: 136 YGVSKCFGENLA-RMYFDKFG------QETALVRIGSCTPEPNNYRMLSTWFSHDDFVSL 188
Query: 127 VPFKIGEPSVKTDWIYVD 144
+ P + ++
Sbjct: 189 IEAVFRAPVLGCPVVWGA 206
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 2e-09
Identities = 48/287 (16%), Positives = 95/287 (33%), Gaps = 82/287 (28%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS----Y 69
NI G +++ A +Q Y ++ + +G + +LP ++E++ + Y
Sbjct: 125 ATNITGFLNILHAAKNAQVQSFTYAAS-SSTYG------DHPALPK--VEENIGNPLSPY 175
Query: 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGPGEERHLPRIVSLAKLGL 126
+K V E + + + Y T +R ++G R P A +
Sbjct: 176 AVTKYVNEIYA-----QVYAR-----TYGFKTIGLRYFNVFGR---RQDPNGAYAAVIPK 222
Query: 127 VPFKI--GEP-------SVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV 177
+ G+ D+ Y+DN++ IL+++ + A Y V
Sbjct: 223 WTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSAL----------AKDSAKDNIYNV 272
Query: 178 SDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237
+ G E G + L+ L++ + +
Sbjct: 273 AVGDRTTLNELSGYIYDELNLIHHIDKLSIKYR---------------E-------FRS- 309
Query: 238 ILPAEVYKVG-VTH-YFSLLKAKDELCYVPIVSPREGMAATISYWQD 282
G V H + KA D L Y P + REG+ ++ ++
Sbjct: 310 ---------GDVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVR 347
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-09
Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 31/170 (18%)
Query: 14 EVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS---Y 69
E N T + E F ++++VY + + K + + I ++ Y
Sbjct: 124 ENNTLTTLKLYERLKHFKRLKKVVYSAAGCSI-AEKTFDDAKAT-EETDIVSLHNNDSPY 181
Query: 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL---GL 126
SK E + K ++ L T R +YGPGE R +
Sbjct: 182 SMSKIFGEFYS-----VYYHKQHQ--LPTVRARFQNVYGPGEILGAGRWRGTPATVWRNV 234
Query: 127 VPFKI-----GEPSV------KT-DWIYVDNLVLALILASMGLLDDIPGQ 164
P I G P T D+I+V+++ LI D PG
Sbjct: 235 TPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIAC---AADGTPGG 281
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 8e-09
Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 33/154 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS----Y 69
++N+N HV+ I+++ + S+ VFG + Y
Sbjct: 92 DLNMNSLFHVLNLAKAKKIKKIFWPSS-IAVFG------PTTPKE-NTPQYTIMEPSTVY 143
Query: 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLY---TCAVRPAAIYGPGEERH------LPRIVS 120
G SK E+ + +Y ++R + I
Sbjct: 144 GISKQAGERW-----CEYYHN-----IYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFY 193
Query: 121 LAKLGLVPFKI-GEPSVKTDWIYVDNLVLALILA 153
A ++ K +Y+D+ + A I
Sbjct: 194 KAIAD-KKYECFLSSETKMPMMYMDDAIDATINI 226
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 5e-08
Identities = 31/164 (18%), Positives = 58/164 (35%), Gaps = 23/164 (14%)
Query: 1 MSGKEMLQFGRVDEVNINGTCHVIEACLEFGIQ-----RLVYVSTYNVVFGGKEIVNGNE 55
+SG+ L F + +N++GT ++ +A + R+V+ S+ VFG +
Sbjct: 97 VSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIA-VFGAPLPYPIPD 155
Query: 56 SLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH- 114
P+ SYG K++ E L+ + R F +R I + +
Sbjct: 156 EFHTTPL----TSYGTQKAICELLLSDYSRRGF-------FDGIGIRLPTICIRPGKPNA 204
Query: 115 -----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153
I+ +G S++ + V LI
Sbjct: 205 AASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHG 248
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 6e-08
Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 36/149 (24%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEH-----VDS 68
N+ G+ +V +A + G++RL+ T +G V PI S
Sbjct: 110 ATNVQGSINVAKAASKAGVKRLLNFQTAL-CYGRPATV---------PIPIDSPTAPFTS 159
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP----GEERHLPRIVSLAKL 124
YG SK+ E L + + ++R A + GP G +P K
Sbjct: 160 YGISKTAGEA-FLMMSD----------VPVVSLRLANVTGPRLAIGP---IPTFYKRLKA 205
Query: 125 GLVPFKIGEPSVKTDWIYVDNLVLALILA 153
G F + D++ + + + L+
Sbjct: 206 GQKCF-CSDTV--RDFLDMSDFLAIADLS 231
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 8e-08
Identities = 23/169 (13%), Positives = 52/169 (30%), Gaps = 35/169 (20%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
N++ HV++ + + +S+ S+ + YG SK
Sbjct: 67 LGNVSYLDHVLDILTRNTKKPAILLSS---------------SIQATQDNP----YGESK 107
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPF 129
EQL+ + + + R ++G + +
Sbjct: 108 LQGEQLLRE-----YAEEYG--NTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNE-EI 159
Query: 130 KIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVS 178
++ + +V+ YVD++V + A G P + + V+
Sbjct: 160 QVNDRNVELTLNYVDDIVAEIKRAIEGT----PTIENGVPTVPNVFKVT 204
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 26/157 (16%), Positives = 44/157 (28%), Gaps = 40/157 (25%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVS---TYNVVFGGKEIVNGNESLPYFPIDEHVDS-- 68
+ N + ++ CLE I +Y S TY G I+
Sbjct: 138 DNNYQYSKELLHYCLEREI-PFLYASSAATY-----------GGR--TSDFIESREYEKP 183
Query: 69 ---YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH------LPRIV 119
+G SK + ++ V R R +YGP E +
Sbjct: 184 LNVFGYSKFLFDEYV-----RQILPEAN--SQIVGFRYFNVYGPREGHKGSMASVAFHLN 236
Query: 120 SLAKLGLVPFKI---GEPSVKTDWIYVDNLVLALILA 153
+ G P D++YV ++ +
Sbjct: 237 TQLNNGESPKLFEGSENFK--RDFVYVGDVADVNLWF 271
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 4e-07
Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 44/157 (28%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVS---TYNVVFGGKEIVNGNESLPYFPIDEHVDS-- 68
+ N +++E +++Y S Y GN P + +S
Sbjct: 113 KTNYQAFLNLLEIARSKKA-KVIYASSAGVY-----------GNTKAPN--VVGKNESPE 158
Query: 69 --YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-------LPRIV 119
YG SK ++ V +N +R +YGP E + + ++
Sbjct: 159 NVYGFSKLCMDEFV-----LSHSNDNV----QVGLRYFNVYGPR-EFYKEKTASMVLQLA 208
Query: 120 SLAKLGLVP--FKIGEPSVKT-DWIYVDNLVLALILA 153
A F+ GE + D++Y+++++ A + A
Sbjct: 209 LGAMAFKEVKLFEFGE---QLRDFVYIEDVIQANVKA 242
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 7e-07
Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 30/152 (19%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVS---TYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
+ N + ++ CLE I +Y S TY GG+ P+ + YG
Sbjct: 91 DNNYQYSKELLHYCLEREI-PFLYASSAATY----GGRTSDFIESREYEKPL----NVYG 141
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFK 130
SK + ++ V R R +YGP E H + S+A
Sbjct: 142 YSKFLFDEYV-----RQILPEAN--SQIVGFRYFNVYGPR-EGHKGSMASVAFHLNTQLN 193
Query: 131 IGEPSVKT---------DWIYVDNLVLALILA 153
GE K D++YV ++ +
Sbjct: 194 NGES-PKLFEGSENFKRDFVYVGDVADVNLWF 224
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 14/102 (13%), Positives = 34/102 (33%), Gaps = 20/102 (19%)
Query: 10 GRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSY 69
+ +V++ G +++A + ++R + +ST + + Y
Sbjct: 76 KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS---------LQPEKWIGAGFDALKDY 126
Query: 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIY-GPG 110
+K A+ + K YT ++P A+
Sbjct: 127 YIAKHFADLYLTKETNLD---------YTI-IQPGALTEEEA 158
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 54/303 (17%), Positives = 96/303 (31%), Gaps = 79/303 (26%)
Query: 1 MSGKEMLQFGRVD--EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLP 58
M G +Q N + ++IEA GI+R Y S+ ++ + +
Sbjct: 104 MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS-ACIYPEFKQLETTNVSL 162
Query: 59 Y----FPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP----- 109
+P + D++G K E+L + K+ + R IYGP
Sbjct: 163 KESDAWPAEPQ-DAFGLEKLATEELCKH-----YNKDFG--IECRIGRFHNIYGPFGTWK 214
Query: 110 -GEERHLPRIVSLAKLGLVPFKI---GEPSVKT-DWIYVDNLVLALILASMGLLDDIPGQ 164
G E+ A+ F++ G T + ++D V ++ D
Sbjct: 215 GGREKAPAAFCRKAQTSTDRFEMWGDGLQ---TRSFTFIDECVEGVLRL---TKSDFRE- 267
Query: 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL 224
P+ G VS +N E +L + LP
Sbjct: 268 ---PVNIGSDEMVS----MN--EMAEMVLSFEEKKLPI---------------------- 296
Query: 225 YPWLNRWWLPQPLILPAEVYKVGVTHYFS-LLKAKDELCYVPIVSPREGMAATISYWQDR 283
+P P GV S K++L + P + +EG+ T + +++
Sbjct: 297 ------HHIPGPE---------GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 341
Query: 284 KRK 286
K
Sbjct: 342 IEK 344
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 8e-06
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST-YNVVFGGKEIVNGNESLPYFPIDEH--VDSYGR 71
+N++ + ++ + G L+Y+S+ Y VF G + PY D ++ YG+
Sbjct: 86 LNVDASGNLAKEAAAVGA-FLIYISSDY--VFDGT-------NPPYREEDIPAPLNLYGK 135
Query: 72 SKSVAEQLVLKSNGR 86
+K E+ VL++N
Sbjct: 136 TKLDGEKAVLENNLG 150
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 12/75 (16%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST-YNVVFGGKEIVNGNESLPYFPIDEH--VDSYGR 71
+N G ++ A G +V +ST Y VF +G P DE +YG+
Sbjct: 89 INAIGPKNLAAAAYSVGA-EIVQISTDY--VF------DGEAKEPITEFDEVNPQSAYGK 139
Query: 72 SKSVAEQLVLKSNGR 86
+K E V N +
Sbjct: 140 TKLEGENFVKALNPK 154
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 3e-05
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST-YNVVFGGKEIVNGNESLPYFPIDE----HVDSY 69
+N G +V A G +LVY+ST Y VF G+ Y ++ Y
Sbjct: 82 INAIGARNVAVASQLVGA-KLVYISTDY--VF------QGDRPEGYDEFHNPAPINI--Y 130
Query: 70 GRSKSVAEQLVLKSNGR 86
G SK EQ V + + +
Sbjct: 131 GASKYAGEQFVKELHNK 147
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST-YNVVFGGKEIVNGNESLPYFPIDE----HVDSY 69
+N + +A E G +V+ ST Y VF G +P+ D +V Y
Sbjct: 80 LNATSVEAIAKAANETGA-WVVHYSTDY--VF------PGTGDIPWQETDATSPLNV--Y 128
Query: 70 GRSKSVAEQLVLKSNGR 86
G++K E+ + + +
Sbjct: 129 GKTKLAGEKALQDNCPK 145
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 13/73 (17%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVST-YNVVFGGKEIVNGNESLPYFPIDEH--VDSYGR 71
+N H++ A +V++ST Y VF G E Y D ++ YG
Sbjct: 83 INAEAVRHIVRAGKVIDS-YIVHISTDY--VFDG-------EKGNYKEEDIPNPINYYGL 132
Query: 72 SKSVAEQLVLKSN 84
SK + E L+ +
Sbjct: 133 SKLLGETFALQDD 145
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 4e-05
Identities = 19/145 (13%), Positives = 46/145 (31%), Gaps = 19/145 (13%)
Query: 9 FGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS 68
E ++ H+I RL+ V + ++ ES + +
Sbjct: 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTA 131
Query: 69 YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP 128
++K + ++ + P+A++ PGE +I +
Sbjct: 132 RAQAKQLEHLKSHQAE-----------FSWTYISPSAMFEPGERTGDYQIG----KDHLL 176
Query: 129 FKIGEPSVKTDWIYVDNLVLALILA 153
F S +I +++ +A++
Sbjct: 177 FGSDGNS----FISMEDYAIAVLDE 197
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 8e-05
Identities = 30/176 (17%), Positives = 51/176 (28%), Gaps = 51/176 (28%)
Query: 14 EVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFG--GKEIVNGNESLPYFPIDEHVDS-- 68
N+ GT +V+ A EFG + LV + T +G +I G Y I + +
Sbjct: 128 HNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTPNIDIEEG-----YITITHNGRTDT 181
Query: 69 ----------YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE------- 111
Y SK + K + + +YG
Sbjct: 182 LPYPKQASSFYHLSKVHDSHNI-----AFTCKAWG--IRATDLNQGVVYGVKTDETEMHE 234
Query: 112 ------------ERHLPRIVSLAKLG--LVPFKIGEPSVKTDWIYVDNLVLALILA 153
L R A +G L + G ++ + + V + +A
Sbjct: 235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQ--TRGYLDIRDTVQCVEIA 288
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 2e-04
Identities = 30/151 (19%), Positives = 49/151 (32%), Gaps = 7/151 (4%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
N+ GT +++EA G + V T + + KE + G + Y SK
Sbjct: 105 STNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDP---YSNSK 161
Query: 74 SVAEQLVLKSNGRPFKKN--NRKCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPF 129
AE + F + VR + G G+ + + A P
Sbjct: 162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPV 221
Query: 130 KIGEPSVKTDWIYVDNLVLALILASMGLLDD 160
I P W +V + +L + L D
Sbjct: 222 IIRNPHAIRPWQHVLEPLSGYLLLAQKLYTD 252
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 53/209 (25%)
Query: 17 INGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE----------- 64
I G ++++C ++RLV+ S+ V + DE
Sbjct: 104 IEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEH--------QLPVYDESCWSDMEFCRA 155
Query: 65 ---HVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP----R 117
Y SK++AEQ K + K N T + P + GP +P
Sbjct: 156 KKMTAWMYFVSKTLAEQAAWK-----YAKENNIDFIT--IIPTLVVGPFIMSSMPPSLIT 208
Query: 118 IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV 177
+S + + ++++D+L A I + P +GR I S +
Sbjct: 209 ALSPITGNEAHY---SIIRQGQFVHLDDLCNAHIYL-F----ENPKAEGRYICSSHDCII 260
Query: 178 SDGFPINTFEFIGPLLKTL--DYDLPKSW 204
D + +L+ +Y++P +
Sbjct: 261 LD---------LAKMLREKYPEYNIPTEF 280
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 2e-04
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 24/98 (24%)
Query: 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
+ +++ G I+ + GI+R + VS+ + ++ Y
Sbjct: 102 KTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT-------------VDPDQGPMNMRHYL 148
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYG 108
+K +A+ + +S YT VRP +
Sbjct: 149 VAKRLADDELKRS-SLD---------YTI-VRPGPLSN 175
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 41/220 (18%), Positives = 72/220 (32%), Gaps = 59/220 (26%)
Query: 14 EVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS---- 68
E+N+ GT +++EA ++ ++Y ST N V+G E NE+ + + +
Sbjct: 98 EINVGGTLNLLEAVRQYNSNCNIIYSST-NKVYGDLEQYKYNETETRYTCVDKPNGYDES 156
Query: 69 --------YGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS 120
YG SK A+Q + R F L T R +++YG R
Sbjct: 157 TQLDFHSPYGCSKGAADQYM-LDYARIFG------LNTVVFRHSSMYGG---RQFATYDQ 206
Query: 121 LAKLGLVP---FKIGEPSVKT--------------DWIYVDNLVLALILASMGLLDDIPG 163
G V K E D ++ ++++ A
Sbjct: 207 ----GWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTAL--------- 253
Query: 164 QKGRPIASGQPYFVSDGFPINTF---EFIGPLLKTLDYDL 200
G + + G +N+ E L + D+
Sbjct: 254 ANVSK-IRGNAFNIG-GTIVNSLSLLELFKLLEDYCNIDM 291
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 43/182 (23%)
Query: 17 INGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE----------- 64
++G +++AC+ ++R +Y S+ + V + +DE
Sbjct: 101 VDGALGILKACVNSKTVKRFIYTSSGSAVSFNGK--------DKDVLDESDWSDVDLLRS 152
Query: 65 ---HVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP----R 117
+Y SK++AE+ VL+ F + N + + I G LP +
Sbjct: 153 VKPFGWNYAVSKTLAEKAVLE-----FGEQNG--IDVVTLILPFIVGRFVCPKLPDSIEK 205
Query: 118 IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV 177
+ L + ++VD++ A I + + GR S +
Sbjct: 206 ALVLVLGKKEQI----GVTRFHMVHVDDVARAHIYL-L----ENSVPGGRYNCSPFIVPI 256
Query: 178 SD 179
+
Sbjct: 257 EE 258
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 35/186 (18%), Positives = 58/186 (31%), Gaps = 41/186 (22%)
Query: 17 INGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDE----------- 64
I G +V++AC ++R++ S+ V + G +DE
Sbjct: 107 IQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTG------LVVDEKNWTDIEFLTS 160
Query: 65 ---HVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP----R 117
Y SK++AE+ K F + N L T V P + G +P
Sbjct: 161 AKPPTWGYPASKTLAEKAAWK-----FAEENNIDLIT--VIPTLMAGSSLTSDVPSSIGL 213
Query: 118 IVSLAKLGLVPFKI----GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 173
+SL S +V+++ A I + GR I
Sbjct: 214 AMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFV-A----EKESASGRYICCAA 268
Query: 174 PYFVSD 179
V +
Sbjct: 269 NTSVPE 274
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 7e-04
Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 24/99 (24%)
Query: 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS-YGR 71
++V+ G + I+A G++ +V V + + P P+++ +
Sbjct: 106 EQVDWIGQKNQIDAAKVAGVKHIVVVGSMGG------------TNPDHPLNKLGNGNILV 153
Query: 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPG 110
K AEQ + S G P YT +R +
Sbjct: 154 WKRKAEQYLADS-GTP---------YT-IIRAGGLLDKE 181
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 389 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.98 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.98 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.98 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.97 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.97 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.97 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.97 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.96 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.96 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.96 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.96 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.96 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.96 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.96 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.96 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.96 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.96 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.95 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.95 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.95 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.95 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.95 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.95 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.95 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.95 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.95 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.95 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.95 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.95 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.94 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.94 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.94 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.94 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.94 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.94 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.94 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.93 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.93 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.93 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.9 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.9 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.9 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.9 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.9 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.89 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.87 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.87 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.87 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.85 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.85 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.78 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.75 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.74 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.73 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.73 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.73 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.7 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.65 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.64 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.63 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.62 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.62 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.61 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.56 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.55 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.54 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.54 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.46 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.37 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.37 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.36 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.33 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.31 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.17 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.12 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 98.96 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 98.95 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 98.95 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 98.93 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 98.92 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 98.9 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 98.89 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 98.87 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 98.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.87 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 98.85 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 98.8 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 98.79 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 98.78 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 98.77 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.76 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 98.76 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 98.75 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 98.74 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 98.74 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 98.73 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.71 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.71 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 98.7 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.69 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 98.67 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 98.67 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 98.66 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 98.66 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.65 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 98.64 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 98.62 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 98.61 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 98.6 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 98.58 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 98.57 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 98.57 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 98.57 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 98.56 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 98.56 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 98.56 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 98.56 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 98.56 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.55 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 98.55 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.55 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 98.53 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 98.53 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 98.52 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 98.52 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 98.51 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 98.51 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 98.51 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 98.51 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 98.5 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 98.5 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.5 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.5 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 98.48 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 98.48 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 98.47 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 98.47 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.47 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.47 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 98.47 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 98.47 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.47 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 98.46 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 98.46 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 98.46 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 98.45 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 98.44 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.43 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 98.43 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 98.43 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 98.42 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.42 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.42 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 98.42 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 98.41 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 98.41 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 98.41 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.4 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.4 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 98.4 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 98.4 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 98.4 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.4 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 98.39 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 98.39 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 98.37 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.37 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 98.36 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.36 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 98.36 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 98.35 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.35 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 98.35 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 98.35 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 98.34 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 98.34 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.34 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 98.34 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 98.32 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 98.31 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 98.31 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.31 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 98.3 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.29 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 98.29 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.29 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 98.29 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 98.28 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.28 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 98.27 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 98.27 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 98.27 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.27 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.26 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.26 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 98.26 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 98.25 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 98.25 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.24 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 98.23 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 98.23 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 98.23 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 98.22 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.21 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.21 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.21 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.2 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 98.2 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.2 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.19 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.19 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.19 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 98.18 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.17 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.16 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 98.15 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.15 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 98.14 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.13 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.12 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.12 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.12 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.12 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.11 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 98.1 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.09 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.08 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 98.06 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.05 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.05 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 98.05 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 98.03 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.03 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 98.02 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.01 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 98.01 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.99 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.99 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.98 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.94 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.93 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 97.92 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.92 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.87 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.87 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.86 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.85 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 97.85 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.85 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.84 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.83 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.78 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.77 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 97.76 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 97.76 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.75 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.74 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.65 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 97.64 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.64 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.63 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.61 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.6 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.55 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.53 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.49 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.49 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.49 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.39 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.35 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 97.31 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.26 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.26 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.1 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.07 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 97.07 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 97.06 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.05 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.01 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 96.98 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 96.94 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.87 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 96.76 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 96.57 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 96.56 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.52 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 96.45 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 96.44 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 94.64 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 93.09 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 93.02 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 90.29 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 88.47 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 85.54 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 80.13 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.98 E-value=5.8e-32 Score=257.91 Aligned_cols=221 Identities=18% Similarity=0.126 Sum_probs=189.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+++..+++|+.++.|++++|++.+++|+||+||.. +||.....+.+|+++..| .+.|+.||..+|++++++..
T Consensus 77 ~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~~-- 149 (311)
T 3m2p_A 77 GKISEFHDNEILTQNLYDACYENNISNIVYASTIS-AYSDETSLPWNEKELPLP----DLMYGVSKLACEHIGNIYSR-- 149 (311)
T ss_dssp SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GCCCGGGCSBCTTSCCCC----SSHHHHHHHHHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHH-HhCCCCCCCCCCCCCCCC----CchhHHHHHHHHHHHHHHHH--
Confidence 67888999999999999999999999999999988 799888888899998777 79999999999999999863
Q ss_pred CCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
+.+++++++||+.||||+.. ..++.++..+..|....++|++++.++|+|++|+|++++.+++
T Consensus 150 -----~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~---------- 214 (311)
T 3m2p_A 150 -----KKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALK---------- 214 (311)
T ss_dssp -----HSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTT----------
T ss_pred -----HcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHh----------
Confidence 26899999999999999887 5688899999999988888999999999999999999999986
Q ss_pred CCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHH
Q 016468 166 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 245 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (389)
.+. .+++||+++++++|+.|+++.+.+.+|.+.+....|.+ .+ .
T Consensus 215 -~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------------~~--------~ 258 (311)
T 3m2p_A 215 -QEK-VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPN--------------------------AN--------E 258 (311)
T ss_dssp -CTT-CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSS--------------------------BC--------C
T ss_pred -cCC-CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCC--------------------------CC--------C
Confidence 333 68899999999999999999999999987665443321 00 0
Q ss_pred hccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 246 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 246 ~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
...+..+|++|++++|||+|+++++++|+++++||++.+..
T Consensus 259 ~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 299 (311)
T 3m2p_A 259 GIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDV 299 (311)
T ss_dssp SCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC----
T ss_pred CcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccC
Confidence 11245799999999999999999999999999999876553
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.2e-32 Score=262.89 Aligned_cols=226 Identities=19% Similarity=0.229 Sum_probs=187.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++..++++|+.+|.|++++|++.+++||||+||.+ +||.....+.+|+++..| .+.|+.||..+|++++.+..
T Consensus 118 ~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~~- 191 (351)
T 3ruf_A 118 VDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS-TYGDHPALPKVEENIGNP----LSPYAVTKYVNEIYAQVYAR- 191 (351)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCCCSSBCTTCCCCC----CSHHHHHHHHHHHHHHHHHH-
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHH-hcCCCCCCCCccCCCCCC----CChhHHHHHHHHHHHHHHHH-
Confidence 456778999999999999999999999999999998 799888888899998777 79999999999999998752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.+++++++||+.||||+.. ..++.++..+..+....++|++++.++|+|++|+|++++.+++.
T Consensus 192 ------~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~---- 261 (351)
T 3ruf_A 192 ------TYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA---- 261 (351)
T ss_dssp ------HHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC----
T ss_pred ------HhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh----
Confidence 25799999999999999875 34688899999999888899999999999999999999999872
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
.+...|++||+++++++|+.|+++.+.+.+|.+......+.. .. +.. +
T Consensus 262 ------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------~~----~~~---~ 309 (351)
T 3ruf_A 262 ------KDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK-------------------YR----EFR---S 309 (351)
T ss_dssp ------CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----E-------------------EE----CCC---T
T ss_pred ------ccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccc-------------------cc----CCC---C
Confidence 235578999999999999999999999999985433222110 00 000 0
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
. ......+|++|++++|||+|+++++++|+++++||+++.
T Consensus 310 ~----~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 349 (351)
T 3ruf_A 310 G----DVRHSQADVTKAIDLLKYRPNIKIREGLRLSMPWYVRFL 349 (351)
T ss_dssp T----CCSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred C----ccceeeeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhh
Confidence 0 012447999999999999999999999999999998753
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.6e-31 Score=253.87 Aligned_cols=224 Identities=14% Similarity=0.144 Sum_probs=185.4
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCC----CCCCCCCCCC-cHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESL----PYFPIDEHVD-SYGRSKSVAEQLV 80 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~----p~~p~~~~~~-~Y~~SK~~aE~~l 80 (389)
..++..++++|+.||.|++++|++.+++|+||+||.+ +||.....+.+|++ +..| .+ +|+.||..+|+++
T Consensus 79 ~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~-vyg~~~~~~~~E~~~~~~~~~p----~~~~Y~~sK~~~E~~~ 153 (319)
T 4b8w_A 79 IKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTC-IFPDKTTYPIDETMIHNGPPHN----SNFGYSYAKRMIDVQN 153 (319)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG-GSCSSCCSSBCGGGGGBSCCCS----SSHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchh-hcCCCCCCCccccccccCCCCC----CcchHHHHHHHHHHHH
Confidence 4567789999999999999999999999999999998 79988877888887 3333 34 6999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHH----HHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSL----AKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~----~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
+.+.. +.+++++++||+.||||+.. ..++.++.. +..|..+.++|++++.++|+|++|+|+++
T Consensus 154 ~~~~~-------~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 226 (319)
T 4b8w_A 154 RAYFQ-------QYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF 226 (319)
T ss_dssp HHHHH-------HHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred HHHHH-------hhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence 98752 25799999999999999875 245566665 78888888889999999999999999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR 230 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 230 (389)
+.+++. .....+++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 227 ~~~~~~----------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------------------- 274 (319)
T 4b8w_A 227 IWVLRE----------YNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTK---------------------- 274 (319)
T ss_dssp HHHHHH----------CCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTS----------------------
T ss_pred HHHHhc----------cccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCC----------------------
Confidence 999973 233457899999999999999999999999987654433211
Q ss_pred ccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 231 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
+. ......+|++|++++|||.|.++++++|+++++||+++..+
T Consensus 275 ---~~----------~~~~~~~d~~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 317 (319)
T 4b8w_A 275 ---SD----------GQFKKTASNSKLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 317 (319)
T ss_dssp ---CC----------CCSCCCBCCHHHHHHCTTCCCCCHHHHHHHHHHHHHHSCSS
T ss_pred ---Cc----------CcccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 00 01123689999999999999999999999999999986543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-31 Score=252.55 Aligned_cols=225 Identities=17% Similarity=0.180 Sum_probs=183.2
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++..+++|+.|+.|++++|++.+++|+||+||.. +||.....+.+|+.|..| .+.|+.||..+|++++.+..
T Consensus 80 ~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~-vyg~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~ 154 (313)
T 3ehe_A 80 AENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTST-VYGEAKVIPTPEDYPTHP----ISLYGASKLACEALIESYCH 154 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGG-GGCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchH-HhCcCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 4577889999999999999999999999999999998 799888788899888777 78999999999999998862
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcC-CCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLG-LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
+.+++++++||+.||||++. +.++.++..+..+ .....+|++++.++|+|++|+|++++.+++
T Consensus 155 -------~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-------- 219 (313)
T 3ehe_A 155 -------TFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-------- 219 (313)
T ss_dssp -------HTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT--------
T ss_pred -------hcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc--------
Confidence 35899999999999999876 4466777777766 445678999999999999999999999985
Q ss_pred CCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHH
Q 016468 164 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV 243 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (389)
+...+++||+++++++|+.|+++.+.+.+|.+.+....+.. ...+.+.
T Consensus 220 ----~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------------------~~~~~~~ 267 (313)
T 3ehe_A 220 ----GDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGD----------------------------RGWKGDV 267 (313)
T ss_dssp ----CCSSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC--------------------------------------
T ss_pred ----cCCCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCc----------------------------cCCcccc
Confidence 23457899999999999999999999999987543322210 0000011
Q ss_pred HHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccCC
Q 016468 244 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 244 ~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~ 287 (389)
....+|++|++ +|||+|+++++++|+++++||+++....
T Consensus 268 ----~~~~~d~~k~~-~lG~~p~~~~~e~l~~~~~~~~~~~~~~ 306 (313)
T 3ehe_A 268 ----PVMLLSIEKLK-RLGWKPRYNSEEAVRMAVRDLVEDLDEE 306 (313)
T ss_dssp ------CCBCCHHHH-HHTCCCSCCHHHHHHHHHHHHHHHHHC-
T ss_pred ----ceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhCcccc
Confidence 12368999995 5999999999999999999999876544
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-31 Score=257.83 Aligned_cols=221 Identities=19% Similarity=0.214 Sum_probs=185.2
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCc-ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGK-EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~-~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+++.++++|+.||.|++++|++.+++|+||+||.+ +||.. ...+.+|++|..| .+.|+.||..+|++++++.
T Consensus 115 ~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~-vy~~~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~ 189 (346)
T 4egb_A 115 IENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDE-VYGSLGKTGRFTEETPLAP----NSPYSSSKASADMIALAYY 189 (346)
T ss_dssp ----CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGG-GGCCCCSSCCBCTTSCCCC----CSHHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchH-HhCCCCcCCCcCCCCCCCC----CChhHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999998 69876 4557889988877 7999999999999999986
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
. +.+++++++||+.||||+.. ..++.++..+..|....++|++++.++|+|++|+|++++.+++
T Consensus 190 ~-------~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~------- 255 (346)
T 4egb_A 190 K-------TYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH------- 255 (346)
T ss_dssp H-------HHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH-------
T ss_pred H-------HhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh-------
Confidence 2 25799999999999999874 4578899999999988888999999999999999999999997
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccc-cCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 241 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (389)
.+. .|++||+++++++++.|+++.+.+.+|.+.+.+. .+.. +.
T Consensus 256 ----~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~---------------------------~~---- 299 (346)
T 4egb_A 256 ----KGR-VGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDR---------------------------LG---- 299 (346)
T ss_dssp ----HCC-TTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC-----------------------------C----
T ss_pred ----cCC-CCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCC---------------------------CC----
Confidence 333 6889999999999999999999999998754221 1110 00
Q ss_pred HHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 242 EVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 242 ~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
......+|++|++++|||+|+++++++|+++++||+++..
T Consensus 300 ----~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 339 (346)
T 4egb_A 300 ----HDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYEKNEE 339 (346)
T ss_dssp ----CCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHH
T ss_pred ----CcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 0123468999999999999999999999999999998643
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=255.67 Aligned_cols=231 Identities=16% Similarity=0.140 Sum_probs=183.1
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+..+++..+++|+.+|.|++++|++.+++|+||+||.. +||.....+.+|+.+..| .+.|+.||..+|++++.+.
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~-vyg~~~~~~~~e~~~~~p----~~~Y~~sK~~~e~~~~~~~ 152 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST-VYGDADVIPTPEEEPYKP----ISVYGAAKAAGEVMCATYA 152 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHH-HhCCCCCCCCCCCCCCCC----CChHHHHHHHHHHHHHHHH
Confidence 34567888999999999999999999999999999998 799888788899988777 7999999999999999876
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcC-CCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLG-LVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
. +.+++++++||++||||+.. +.++.++..+..+ .....++++++.++|+|++|+|++++.+++...
T Consensus 153 ~-------~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~---- 221 (312)
T 3ko8_A 153 R-------LFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFE---- 221 (312)
T ss_dssp H-------HHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHH----
T ss_pred H-------HhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhcc----
Confidence 2 25899999999999999875 3456777777776 445577999999999999999999999997311
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 242 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (389)
.+...+++||+++++++|+.|+++.+.+.+|.+.+...+|.... . + .
T Consensus 222 ----~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------------------------~---~-~ 268 (312)
T 3ko8_A 222 ----EMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPD-------------------------G---R-G 268 (312)
T ss_dssp ----HSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC-------------------------------------
T ss_pred ----ccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCcccc-------------------------c---c-C
Confidence 13446789999999999999999999999998765554443210 0 0 0
Q ss_pred HHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 243 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 243 ~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
...-.....+|++|++++|||+|+++++++|+++++||++++
T Consensus 269 ~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 310 (312)
T 3ko8_A 269 WPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL 310 (312)
T ss_dssp --CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 000012347899999999999999999999999999998764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=247.94 Aligned_cols=221 Identities=19% Similarity=0.255 Sum_probs=187.6
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..++...++ |+.++.|++++|++.+++|+||+||.. +||.....+.+|+.+..| .+.|+.||..+|+++.++..
T Consensus 86 ~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~-v~~~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~~ 159 (321)
T 3vps_A 86 FKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCE-VYGQADTLPTPEDSPLSP----RSPYAASKVGLEMVAGAHQR 159 (321)
T ss_dssp TTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHH-HhCCCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHHHHH
Confidence 345566777 999999999999999999999999999 799888888899998877 79999999999999999863
Q ss_pred CCCCCCCCCCc-eEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 86 RPFKKNNRKCL-YTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 86 ~~~~~~~~~gl-~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.++ +++++||+.||||+.. ..++.++..+..+....++|++++.++|+|++|+|++++.+++
T Consensus 160 -------~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~------- 225 (321)
T 3vps_A 160 -------ASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALAN------- 225 (321)
T ss_dssp -------SSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGG-------
T ss_pred -------HcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHh-------
Confidence 3678 9999999999999876 3578888989889888888999999999999999999999987
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 242 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (389)
.+.. | +||+++++++|+.|+++.+. .+|.+.+....|.+ +.
T Consensus 226 ----~~~~-g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~-------------------------~~------- 266 (321)
T 3vps_A 226 ----RPLP-S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR-------------------------PN------- 266 (321)
T ss_dssp ----SCCC-S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC-------------------------TT-------
T ss_pred ----cCCC-C-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC-------------------------CC-------
Confidence 3333 6 99999999999999999999 99987665444321 00
Q ss_pred HHHhccccccchHHHHHhCCCCC-CCChHHHHHHHHHHHHHcccCCC
Q 016468 243 VYKVGVTHYFSLLKAKDELCYVP-IVSPREGMAATISYWQDRKRKSL 288 (389)
Q Consensus 243 ~~~~~~~~~~d~~ka~~~LG~~p-~~sl~~~l~~~v~~~~~~~~~~~ 288 (389)
...+..+|++|++++|||+| +++++++|+++++||+++.....
T Consensus 267 ---~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~~~~ 310 (321)
T 3vps_A 267 ---EITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLDDI 310 (321)
T ss_dssp ---CCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCTTC-
T ss_pred ---CcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCCchh
Confidence 01245799999999999999 88999999999999998765443
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-30 Score=252.71 Aligned_cols=218 Identities=17% Similarity=0.220 Sum_probs=186.8
Q ss_pred chhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCC--cccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGG--KEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~--~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.++++|+.||.|++++|++.+++||||+||.+ |||. ....+.+|+.+..| .+.|+.||..+|++++.+..
T Consensus 95 ~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~-vyg~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~E~~~~~~~~- 168 (347)
T 4id9_A 95 RDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGE-VYPENRPEFLPVTEDHPLCP----NSPYGLTKLLGEELVRFHQR- 168 (347)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GTTTTSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH-HhCCCCCCCCCcCCCCCCCC----CChHHHHHHHHHHHHHHHHH-
Confidence 3788999999999999999999999999999998 7988 45667889888777 79999999999999998762
Q ss_pred CCCCCCCCCceEEEEecCcee-------------cCCC-------------CCCHHHHHHHHHcCCCcceecCCCccccc
Q 016468 87 PFKKNNRKCLYTCAVRPAAIY-------------GPGE-------------ERHLPRIVSLAKLGLVPFKIGEPSVKTDW 140 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~Iy-------------Gp~~-------------~~~~~~li~~~~~g~~~~~~g~~~~~~~~ 140 (389)
..+++++++||+.|| ||+. ...++.++..+..|....++|++++.++|
T Consensus 169 ------~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 242 (347)
T 4id9_A 169 ------SGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPF 242 (347)
T ss_dssp ------HSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBC
T ss_pred ------hcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCC
Confidence 368999999999999 8873 34567788888889888888999999999
Q ss_pred ----eeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHH
Q 016468 141 ----IYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKV 216 (389)
Q Consensus 141 ----v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~ 216 (389)
+|++|+|++++.+++ .+...|++||+++++++|+.|+++.+.+.+|.+.+...+|..
T Consensus 243 ~~~~i~v~Dva~ai~~~~~-----------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------- 303 (347)
T 4id9_A 243 RMHITDTRDMVAGILLALD-----------HPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGD-------- 303 (347)
T ss_dssp EECEEEHHHHHHHHHHHHH-----------CGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSC--------
T ss_pred ccCcEeHHHHHHHHHHHhc-----------CcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCc--------
Confidence 999999999999998 444568899999999999999999999999987655444321
Q ss_pred HHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccCC
Q 016468 217 FSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~ 287 (389)
+. ...+|++|++++|||+|+++++++|+++++||+++....
T Consensus 304 -------------------~~-----------~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~ 344 (347)
T 4id9_A 304 -------------------GV-----------YYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAKE 344 (347)
T ss_dssp -------------------CC-----------BCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred -------------------cc-----------ccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhhcc
Confidence 11 447899999999999999999999999999999866544
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-30 Score=247.95 Aligned_cols=242 Identities=16% Similarity=0.190 Sum_probs=185.6
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc--CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI--VNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~--~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
..+++.++++|+.++.|++++|++.+++|+||+||.+ +|+.... .+ +|+++..|.....+.|+.||..+|++++++
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~-~~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY-AMPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG-GSCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH-hhCcCCCCCCC-CCCCCCCccccccChHHHHHHHHHHHHHHH
Confidence 3467788999999999999999999999999999998 6886554 34 788776552222579999999999999998
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCC-C-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGE-E-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~-~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
. .. +++++++||+.||||+. . . ++.++..+..|....+ +++.++|+|++|+|++++.+++
T Consensus 170 ~-------~~-g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~------ 231 (342)
T 2x4g_A 170 A-------RN-GLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALE------ 231 (342)
T ss_dssp H-------HT-TCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHH------
T ss_pred h-------hc-CCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHh------
Confidence 5 23 79999999999999987 4 3 6778888888875544 5678999999999999999997
Q ss_pred CCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHH
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA 241 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (389)
.+.. |++||+++++ +|+.|+++.+.+.+|.+.+. .+|.+....++.+.+.+..... ..|.++++
T Consensus 232 -----~~~~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 295 (342)
T 2x4g_A 232 -----RGRI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSG--------QLPLLDET 295 (342)
T ss_dssp -----HSCT-TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------------
T ss_pred -----CCCC-CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhC--------CCCCCCHH
Confidence 2233 8899999999 99999999999999998777 8898887777766654433221 12333333
Q ss_pred HHHHhccccccchHHHHHhCCC-CCCCChHHHHHHHHHHHHHcc
Q 016468 242 EVYKVGVTHYFSLLKAKDELCY-VPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 242 ~~~~~~~~~~~d~~ka~~~LG~-~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.+.....+..+|++|++++||| +| ++++++++++++||++++
T Consensus 296 ~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g 338 (342)
T 2x4g_A 296 AIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDNG 338 (342)
T ss_dssp --CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcC
Confidence 3333345568999999999999 99 799999999999998865
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.9e-30 Score=253.41 Aligned_cols=237 Identities=17% Similarity=0.161 Sum_probs=184.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC---CCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY---FPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~---~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++...+++|+.+|.|++++|++.+ +||||+||.+ +||.....+.+|+++. .|...+.+.|+.||..+|++++++
T Consensus 109 ~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~-vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~ 186 (372)
T 3slg_A 109 KQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSE-VYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGY 186 (372)
T ss_dssp HCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGG-GGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHH-HhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 4567788999999999999999999 9999999988 7998777777777643 222234679999999999999999
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
.. + +++++++||+.||||+... .++.++..+..|....+++++++.++|+|++|+|++++.+
T Consensus 187 ~~-------~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 258 (372)
T 3slg_A 187 GM-------E-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKI 258 (372)
T ss_dssp HT-------T-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHH
T ss_pred HH-------C-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHH
Confidence 73 3 8999999999999998653 4678888999999888889999999999999999999999
Q ss_pred HhcccCCCCCCCCCCC--CCCceEEEeC-CCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Q 016468 154 SMGLLDDIPGQKGRPI--ASGQPYFVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR 230 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~--~~g~~y~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 230 (389)
++ .+. ..|++||+++ ++++|+.|+++.+.+.+|.+.+....|... .....
T Consensus 259 ~~-----------~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~----------------~~~~~ 311 (372)
T 3slg_A 259 IE-----------NSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRV----------------KLVET 311 (372)
T ss_dssp HH-----------CGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTC----------------CEEEC
T ss_pred Hh-----------cccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccc----------------eeeec
Confidence 98 333 5789999999 589999999999999999775543322100 00000
Q ss_pred ccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 231 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
....... ..........+|++|++++|||+|+++++++|+++++||+++.
T Consensus 312 ---~~~~~~~-~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 361 (372)
T 3slg_A 312 ---TSGAYYG-NGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHV 361 (372)
T ss_dssp -----------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCH
T ss_pred ---ccccccc-CCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 0000000 0001123457899999999999999999999999999998754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-30 Score=246.03 Aligned_cols=224 Identities=17% Similarity=0.170 Sum_probs=179.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++...+++|+.++.|++++|++.+++|+|++||.. +||.....+.+|+.+..| .+.|+.||..+|++++.+...
T Consensus 96 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~~~~~~e~~~~~~----~~~Y~~sK~~~e~~~~~~~~~ 170 (341)
T 3enk_A 96 AKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSAT-VYGVPERSPIDETFPLSA----TNPYGQTKLMAEQILRDVEAA 170 (341)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GBCSCSSSSBCTTSCCBC----SSHHHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecce-EecCCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHHHhhc
Confidence 355678899999999999999999999999999988 698887778899988776 789999999999999987531
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC------------CCHHHHHHHHHcC-CCcceec------CCCccccceeHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAKLG-LVPFKIG------EPSVKTDWIYVDNLV 147 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~~~li~~~~~g-~~~~~~g------~~~~~~~~v~vdDla 147 (389)
..+++++++||++||||+.. ..++.+...+... ..+.++| ++++.++|+|++|+|
T Consensus 171 ------~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva 244 (341)
T 3enk_A 171 ------DPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLA 244 (341)
T ss_dssp ------CTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHH
T ss_pred ------CCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHH
Confidence 13599999999999999642 2234444433332 3445567 889999999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhc
Q 016468 148 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPW 227 (389)
Q Consensus 148 ~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~ 227 (389)
++++.+++... +...|++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 245 ~a~~~~~~~~~---------~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------- 296 (341)
T 3enk_A 245 RGHIAALDALE---------RRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARR------------------- 296 (341)
T ss_dssp HHHHHHHHHHH---------HHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-------------------
T ss_pred HHHHHHHHhhh---------cCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCC-------------------
Confidence 99999987310 23458899999999999999999999999987665443321
Q ss_pred cccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 228 LNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+. -.....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 297 ------~~----------~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 297 ------PG----------DVAECYANPAAAAETIGWKAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp ------TT----------CCSEECBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred ------CC----------CccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 00 0123478999999999999999999999999999998654
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-30 Score=243.46 Aligned_cols=215 Identities=23% Similarity=0.265 Sum_probs=178.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCC-cccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGG-KEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~-~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++..+++|+.|+.|++++|++.+++|+|++||.+.+||. ....+.+|+.+..| .+.|+.||..+|++++.+..
T Consensus 84 ~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~ 159 (311)
T 2p5y_A 84 EDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRP----KSPYAASKAAFEHYLSVYGQ 159 (311)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCC----CChHHHHHHHHHHHHHHHHH
Confidence 35677899999999999999999999999999998347986 44456788887666 68999999999999988752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC-----CHHHHHHHHHcCCCccee-----cCCCccccceeHHHHHHHHHHHHh
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLVPFKI-----GEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----~~~~li~~~~~g~~~~~~-----g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.+++++++||++||||+... .++.++..+..+....++ |++++.++|+|++|+|++++.+++
T Consensus 160 -------~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~ 232 (311)
T 2p5y_A 160 -------SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALF 232 (311)
T ss_dssp -------HHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHH
T ss_pred -------HcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 257999999999999998652 356777777788877677 888999999999999999999987
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 235 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 235 (389)
.+ |++||+++++++|+.|+++.+.+.+|.+.+....|.. +.
T Consensus 233 -----------~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------------~~ 273 (311)
T 2p5y_A 233 -----------SL---EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR-------------------------PG 273 (311)
T ss_dssp -----------HC---CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC-------------------------TT
T ss_pred -----------CC---CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-------------------------cc
Confidence 32 7899999999999999999999999987654433321 00
Q ss_pred CCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 236 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
+ .....+|++|+++ |||+|+++++++|+++++||++
T Consensus 274 ------~----~~~~~~d~~k~~~-lg~~p~~~~~~~l~~~~~~~~~ 309 (311)
T 2p5y_A 274 ------D----LERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHFRG 309 (311)
T ss_dssp ------C----CSBCCBCCHHHHT-TTCCCSSCHHHHHHHHHHHHHT
T ss_pred ------c----hhhccCCHHHHHH-CCCCCCCCHHHHHHHHHHHHHh
Confidence 0 1234789999999 9999999999999999999976
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=247.47 Aligned_cols=218 Identities=18% Similarity=0.178 Sum_probs=182.8
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
...+++..+++|+.||.|++++|++.+++ |||+||.+ +||.... +.+|+.+..| .+.|+.||..+|++++.+.
T Consensus 104 ~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~-vyg~~~~-~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~ 176 (362)
T 3sxp_A 104 TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAG-VYGNTKA-PNVVGKNESP----ENVYGFSKLCMDEFVLSHS 176 (362)
T ss_dssp GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGG-GGCSCCS-SBCTTSCCCC----SSHHHHHHHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHH-HhCCCCC-CCCCCCCCCC----CChhHHHHHHHHHHHHHHh
Confidence 44678899999999999999999999996 99999988 7987766 8899988777 7899999999999999986
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
. .++++++||++||||+.. ..++.++..+..+....+++++++.++|+|++|+|++++.+++
T Consensus 177 ~---------~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~--- 244 (362)
T 3sxp_A 177 N---------DNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMK--- 244 (362)
T ss_dssp T---------TSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTT---
T ss_pred c---------cCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHh---
Confidence 3 289999999999999875 4578888899999887788999999999999999999999986
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 238 (389)
.+ ..| +||+++++++|+.|+++.+.+.+| +.+....|.+.
T Consensus 245 --------~~-~~g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~----------------------------- 284 (362)
T 3sxp_A 245 --------AQ-KSG-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY----------------------------- 284 (362)
T ss_dssp --------CS-SCE-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC--------------------------------
T ss_pred --------cC-CCC-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC-----------------------------
Confidence 33 356 999999999999999999999999 65544444320
Q ss_pred CHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 239 LPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 239 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
........+|++|++++|||+|+++++++|+++++||++....
T Consensus 285 -----~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 327 (362)
T 3sxp_A 285 -----AFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKG 327 (362)
T ss_dssp ---------CCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHTCC---
T ss_pred -----cCcccceecCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 0112345799999999999999999999999999999875443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-29 Score=240.02 Aligned_cols=223 Identities=17% Similarity=0.198 Sum_probs=177.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.|++++|++.+++|+||+||.+ +||.....+.+|+++..| .+.|+.||..+|++++.+..
T Consensus 85 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~-~~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~- 158 (330)
T 2c20_A 85 EKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA-TYGEVDVDLITEETMTNP----TNTYGETKLAIEKMLHWYSQ- 158 (330)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GGCSCSSSSBCTTSCCCC----SSHHHHHHHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCce-eeCCCCCCCCCcCCCCCC----CChHHHHHHHHHHHHHHHHH-
Confidence 456788999999999999999999999999999988 698877677899988766 68999999999999998863
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC-----------CCHHHHHHHHHc-CCCcceec------CCCccccceeHHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE-----------RHLPRIVSLAKL-GLVPFKIG------EPSVKTDWIYVDNLVL 148 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~-----------~~~~~li~~~~~-g~~~~~~g------~~~~~~~~v~vdDla~ 148 (389)
+.+++++++||+.||||+.. ..++.+++.+.. +..+.++| ++++.++|+|++|+|+
T Consensus 159 ------~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~ 232 (330)
T 2c20_A 159 ------ASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVA 232 (330)
T ss_dssp ------TSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHH
T ss_pred ------HhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHH
Confidence 25899999999999999631 234455554442 33455555 6788999999999999
Q ss_pred HHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcc
Q 016468 149 ALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWL 228 (389)
Q Consensus 149 a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~ 228 (389)
+++.+++... ....+++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 233 a~~~~~~~~~---------~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------- 283 (330)
T 2c20_A 233 AHFLGLKDLQ---------NGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRR-------------------- 283 (330)
T ss_dssp HHHHHHHHHH---------TTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCC--------------------
T ss_pred HHHHHHhccc---------cCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC--------------------
Confidence 9999987311 11236899999999999999999999999987654433311
Q ss_pred ccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCC-ChHHHHHHHHHHHHHccc
Q 016468 229 NRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQDRKR 285 (389)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~~~~~~~~ 285 (389)
+.. .....+|++|++++|||+|++ +++++|+++++||+++..
T Consensus 284 -----~~~----------~~~~~~d~~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~~ 326 (330)
T 2c20_A 284 -----AGD----------PARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQPN 326 (330)
T ss_dssp -----SSC----------CSEECBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHCSS
T ss_pred -----CCc----------ccccccCHHHHHHHhCCCCccCCHHHHHHHHHHHHHHhhh
Confidence 000 013478999999999999998 999999999999988654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=242.41 Aligned_cols=222 Identities=18% Similarity=0.173 Sum_probs=182.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.|++++|++.+++|+||+||.. +|+.....+.+|+++..| .+.|+.||..+|++++.+..
T Consensus 120 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~-~~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~- 193 (352)
T 1sb8_A 120 NDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS-TYGDHPGLPKVEDTIGKP----LSPYAVTKYVNELYADVFSR- 193 (352)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCCCSSBCTTCCCCC----CSHHHHHHHHHHHHHHHHHH-
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH-hcCCCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHHHHH-
Confidence 456788999999999999999999999999999999 698877777889888766 78999999999999988752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.+++++++||+.||||+... .++.++..+..|....++|++++.++|+|++|+|++++.+++.
T Consensus 194 ------~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~---- 263 (352)
T 1sb8_A 194 ------CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA---- 263 (352)
T ss_dssp ------HHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC----
T ss_pred ------HcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc----
Confidence 247999999999999998652 3677888888888777889999999999999999999998862
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhC---CCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL---DYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~l---g~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+...|++||+++++++|+.|+++.+.+.+ |.+.+.. |.. .+..
T Consensus 264 ------~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~--~~~------------------------~~~~- 310 (352)
T 1sb8_A 264 ------GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE--PVY------------------------RDFR- 310 (352)
T ss_dssp ------CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC--CEE------------------------ECCC-
T ss_pred ------cccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC--cee------------------------cCCC-
Confidence 123468899999999999999999999999 8765422 100 0000
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+. ......+|++|++++|||+|+++++++|+++++||+++
T Consensus 311 --~~----~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 311 --EG----DVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp --TT----CCSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred --cc----chhhccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 01234789999999999999989999999999999864
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=240.25 Aligned_cols=219 Identities=19% Similarity=0.177 Sum_probs=180.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCc--ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGK--EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~--~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+++..+++|+.||.|++++|.+. +++|+||+||.. +||.. ...+.+|+++..| .+.|+.||..+|++++.+
T Consensus 92 ~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~E~~~~~~ 166 (321)
T 2pk3_A 92 LNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSE-EYGMILPEESPVSEENQLRP----MSPYGVSKASVGMLARQY 166 (321)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGG-GTBSCCGGGCSBCTTSCCBC----CSHHHHHHHHHHHHHHHH
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHH-hcCCCCCCCCCCCCCCCCCC----CCccHHHHHHHHHHHHHH
Confidence 467889999999999999999886 699999999998 68876 5667889887766 689999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHc---C--CCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKL---G--LVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~---g--~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
.. +.|++++++||+.||||+... .++.++..+.. | .....++++++.++|+|++|+|++++.+++
T Consensus 167 ~~-------~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~- 238 (321)
T 2pk3_A 167 VK-------AYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ- 238 (321)
T ss_dssp HH-------HHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHH-
T ss_pred HH-------HcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHh-
Confidence 52 247999999999999998763 45677777666 7 456677888999999999999999999987
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (389)
.+ ..|++||+++++++++.|+++.+.+.+|.+.+....|.. ..+
T Consensus 239 ----------~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------------------------~~~ 282 (321)
T 2pk3_A 239 ----------YG-KTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ-------------------------LRP 282 (321)
T ss_dssp ----------HC-CTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG-------------------------CCS
T ss_pred ----------CC-CCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc-------------------------CCC
Confidence 22 357899999999999999999999999987554443321 000
Q ss_pred CCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 237 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
. + .....+|++|++++|||+|+++++++|+++++||++
T Consensus 283 ~----~----~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 283 S----E----VPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp S----C----CSBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHT
T ss_pred c----c----cchhccCHHHHHHHcCCCcCCCHHHHHHHHHHHHhc
Confidence 0 0 123578999999999999999999999999999975
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-30 Score=243.80 Aligned_cols=224 Identities=15% Similarity=0.138 Sum_probs=178.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEH-VDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~-~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++..+++|+.++.|++++|++.+++|+||+||.. +||.....+.+|+++......+ .+.|+.||..+|++++++..
T Consensus 74 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~-vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 152 (321)
T 1e6u_A 74 TYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC-IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNR 152 (321)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHH-HcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 466788999999999999999999999999999998 6987766677887632211112 25899999999999998752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHc----C-CCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKL----G-LVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~----g-~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
+.+++++++||+.||||+.. ..++.++..+.. | ..+.+++++++.++|+|++|+|++++.++
T Consensus 153 -------~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~ 225 (321)
T 1e6u_A 153 -------QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVM 225 (321)
T ss_dssp -------HHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred -------HhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHH
Confidence 24799999999999999875 446777777754 4 45666789999999999999999999999
Q ss_pred hcccCCCCCCCCCCCC--------CCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhh
Q 016468 155 MGLLDDIPGQKGRPIA--------SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYP 226 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~--------~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~ 226 (389)
+ .+.. .+++||+++++++|+.|+++.+.+.+|.+.+....|.
T Consensus 226 ~-----------~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------------------- 275 (321)
T 1e6u_A 226 E-----------LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS------------------- 275 (321)
T ss_dssp H-----------SCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT-------------------
T ss_pred h-----------CcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCC-------------------
Confidence 7 2222 3689999999999999999999999998754333221
Q ss_pred ccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 227 WLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.+. ......+|++|+++ |||+|+++++++|+++++||+++..
T Consensus 276 --------~~~--------~~~~~~~d~~k~~~-lG~~p~~~~~~~l~~~~~~~~~~~~ 317 (321)
T 1e6u_A 276 --------KPD--------GTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQD 317 (321)
T ss_dssp --------SCC--------CCSBCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTC-
T ss_pred --------CCC--------CcccccCCHHHHHh-cCCccCCcHHHHHHHHHHHHHHHHH
Confidence 111 01234789999999 9999999999999999999988654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=239.50 Aligned_cols=219 Identities=16% Similarity=0.162 Sum_probs=160.4
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++..+++|+.++.|++++|++.++ |+||+||.+ +||.....+.+|+++..| .+.|+.||..+|++++++..
T Consensus 83 ~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~~~~~~E~~~~~p----~~~Y~~sK~~~e~~~~~~~~ 156 (310)
T 1eq2_A 83 EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRTSDFIESREYEKP----LNVYGYSKFLFDEYVRQILP 156 (310)
T ss_dssp CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGG-GGTTCCSCBCSSGGGCCC----SSHHHHHHHHHHHHHHHHGG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHH-HhCCCCCCCCCCCCCCCC----CChhHHHHHHHHHHHHHHHH
Confidence 346778999999999999999999999 999999998 698877667888887766 68999999999999999863
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCc-cccceeHHHHHHHHHHHHhccc
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSV-KTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~-~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+.+++++++||+.||||++. ..++.++..+..+....+++++++ .++|+|++|+|++++.+++
T Consensus 157 -------~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~--- 226 (310)
T 1eq2_A 157 -------EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE--- 226 (310)
T ss_dssp -------GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHH---
T ss_pred -------HcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHh---
Confidence 35899999999999999874 456788888888887777888889 9999999999999999997
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLI 238 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 238 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+ +...+|.+ .
T Consensus 227 --------~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~--------------------------~--- 266 (310)
T 1eq2_A 227 --------NGV--SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFP--------------------------D--- 266 (310)
T ss_dssp --------HCC--CEEEEESCSCCBCHHHHHHHC----------------------------------------------
T ss_pred --------cCC--CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCC--------------------------h---
Confidence 333 7899999999999999999999999876 22122211 0
Q ss_pred CHHHHHHhccccccchHHHHHhCCC-CCCCChHHHHHHHHHHHHHc
Q 016468 239 LPAEVYKVGVTHYFSLLKAKDELCY-VPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 239 ~~~~~~~~~~~~~~d~~ka~~~LG~-~p~~sl~~~l~~~v~~~~~~ 283 (389)
...........+|++|+++ ||| .|.++++++|+++++||+++
T Consensus 267 --~~~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 267 --KLKGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp -------CCCSCCBCCHHHHH-TTCCCCCCCHHHHHHHHHHHTC--
T ss_pred --hhhcccccccccchHHHHh-cCCCCCCCCHHHHHHHHHHHHHhc
Confidence 0000111234679999986 999 78889999999999999653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=242.14 Aligned_cols=239 Identities=15% Similarity=0.130 Sum_probs=182.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCC---CCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYF---PIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~---p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+++..+++|+.++.|++++|++.+ +|+||+||.+ +||.....+.+|+++.. |...+.+.|+.||..+|++++.+
T Consensus 85 ~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~-v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~ 162 (345)
T 2bll_A 85 RNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSE-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162 (345)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGG-GGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHH-HcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHH
Confidence 3567788999999999999999999 8999999998 69887666678876542 22234568999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
.. +.+++++++||+.||||+... .++.++..+..|....+++++++.++|+|++|+|++++.+
T Consensus 163 ~~-------~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 235 (345)
T 2bll_A 163 GE-------KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235 (345)
T ss_dssp HH-------HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred HH-------hcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHH
Confidence 52 247999999999999998642 3577888888888777788899999999999999999999
Q ss_pred HhcccCCCCCCCCCCC--CCCceEEEeCCC-CCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Q 016468 154 SMGLLDDIPGQKGRPI--ASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR 230 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~--~~g~~y~i~~~~-~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 230 (389)
++ .+. ..|++||+++++ ++|+.|+++.+.+.+|.+.+...+|.+.......
T Consensus 236 ~~-----------~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~--------------- 289 (345)
T 2bll_A 236 IE-----------NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE--------------- 289 (345)
T ss_dssp HH-----------CGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC----------------
T ss_pred Hh-----------hccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCcccccccccc---------------
Confidence 97 222 468899999986 8999999999999998775544444320000000
Q ss_pred ccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 231 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
....... .... .....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 290 ---~~~~~~~-~~~~-~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 339 (345)
T 2bll_A 290 ---SSSYYGK-GYQD-VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (345)
T ss_dssp ----------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred ---chhhccc-cccc-hhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence 0000000 0000 134578999999999999999999999999999987644
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=241.96 Aligned_cols=220 Identities=23% Similarity=0.309 Sum_probs=181.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++.++++|+.+|.|++++|.+.+++|+||+||.+ +||.....+.+|+.+..| .+.|+.||..+|++++.+..
T Consensus 94 ~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~-vyg~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~- 167 (337)
T 1r6d_A 94 AGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQ-VYGSIDSGSWTESSPLEP----NSPYAASKAGSDLVARAYHR- 167 (337)
T ss_dssp HCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG-GGCCCSSSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHHH-
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchH-HhCCCCCCCCCCCCCCCC----CCchHHHHHHHHHHHHHHHH-
Confidence 466788999999999999999999999999999998 698776667788887766 68999999999999998752
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
+.+++++++||+.||||+.. +.++.++..+..+....+++++++.++|+|++|+|++++.+++
T Consensus 168 ------~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~--------- 232 (337)
T 1r6d_A 168 ------TYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLA--------- 232 (337)
T ss_dssp ------HHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH---------
T ss_pred ------HHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHh---------
Confidence 24799999999999999874 4467788888888877778999999999999999999999987
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (389)
.+ ..|++||+++++++|+.|+++.+.+.+|.+.+.+.. .+....
T Consensus 233 --~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~---------------------------~~~~~~------ 276 (337)
T 1r6d_A 233 --GG-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK---------------------------VADRKG------ 276 (337)
T ss_dssp --HC-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEE---------------------------ECCCTT------
T ss_pred --CC-CCCCEEEeCCCCCccHHHHHHHHHHHhCCCccccee---------------------------cCCCCC------
Confidence 22 257899999999999999999999999976431110 011000
Q ss_pred HhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 245 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 245 ~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
......+|++|++++|||+|+++++++|+++++||+++.
T Consensus 277 -~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 315 (337)
T 1r6d_A 277 -HDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENR 315 (337)
T ss_dssp -CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCH
T ss_pred -CcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhch
Confidence 011236899999999999999999999999999998753
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3e-29 Score=245.77 Aligned_cols=218 Identities=20% Similarity=0.199 Sum_probs=172.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcccCCCC--CCC---CC-CCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGN--ESL---PY-FPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~~~~~~--E~~---p~-~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+++.++++|+.++.|++++|++. +++||||+||.. +||.....+.+ |+. |. .| .+.|+.||..+|++
T Consensus 117 ~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~-vyg~~~~~~~~~~E~~~~~~~~~~----~~~Y~~sK~~~E~~ 191 (377)
T 2q1s_A 117 HDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGC-SIAEKTFDDAKATEETDIVSLHNN----DSPYSMSKIFGEFY 191 (377)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC---------------CCCCCCCSSCC----CSHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHH-HcCCCCCCCcCcccccccccccCC----CCchHHHHHHHHHH
Confidence 356788999999999999999999 999999999988 79877665667 776 54 44 68999999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCC---------------CCCHHHHHHHHHcCCCcceecCCCccccceeHH
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE---------------ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVD 144 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~---------------~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vd 144 (389)
++++.. +.+++++++||+.||||+. ...++.++..+..+....+++++++.++|+|++
T Consensus 192 ~~~~~~-------~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~ 264 (377)
T 2q1s_A 192 SVYYHK-------QHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVE 264 (377)
T ss_dssp HHHHHH-------HHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHH
T ss_pred HHHHHH-------HhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHH
Confidence 998752 2479999999999999987 345778888888898777789999999999999
Q ss_pred HHHHH-HHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHH
Q 016468 145 NLVLA-LILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSV 223 (389)
Q Consensus 145 Dla~a-~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~ 223 (389)
|+|++ ++.+++ .+. .| +||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 265 Dva~a~i~~~~~-----------~~~-~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------------- 316 (377)
T 2q1s_A 265 DVANGLIACAAD-----------GTP-GG-VYNIASGKETSIADLATKINEITGNNTELDRLPKR--------------- 316 (377)
T ss_dssp HHHHHHHHHHHH-----------CCT-TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC---------------
T ss_pred HHHHHHHHHHHh-----------cCC-CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC---------------
Confidence 99999 999987 333 57 99999999999999999999999987554433310
Q ss_pred hhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 224 LYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+.+. .....+|++|++++|||+|+++++++|+++++||+++
T Consensus 317 ----------------~~~~---~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 317 ----------------PWDN---SGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp ----------------GGGC---C-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred ----------------cccc---ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 0000 0145789999999999999999999999999999875
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-29 Score=239.32 Aligned_cols=219 Identities=23% Similarity=0.260 Sum_probs=178.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++.++++|+.|+.|++++|.+.++ +|+||+||.. +||.....+.+|+.+..| .+.|+.||..+|++++.+..
T Consensus 93 ~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vyg~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~ 167 (336)
T 2hun_A 93 SSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDE-VYGDILKGSFTENDRLMP----SSPYSATKAASDMLVLGWTR 167 (336)
T ss_dssp HCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCCCSSSCBCTTBCCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHH-HHCCCCCCCcCCCCCCCC----CCccHHHHHHHHHHHHHHHH
Confidence 46678899999999999999999875 7999999998 698776667888887766 68999999999999998752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
+.+++++++||+.||||+.. ..++.++..+..+....+++++++.++|+|++|+|++++.+++
T Consensus 168 -------~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~-------- 232 (336)
T 2hun_A 168 -------TYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLL-------- 232 (336)
T ss_dssp -------HTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHH--------
T ss_pred -------HhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHh--------
Confidence 25799999999999999874 3467788888888877788999999999999999999999986
Q ss_pred CCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHH
Q 016468 164 QKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEV 243 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (389)
.+ ..|++||+++++++|+.|+++.+.+.+|.+.+.+... +... .
T Consensus 233 ---~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---------------------------~~~~---~-- 276 (336)
T 2hun_A 233 ---KG-ESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELV---------------------------EDRP---G-- 276 (336)
T ss_dssp ---HC-CTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEE---------------------------CCCT---T--
T ss_pred ---CC-CCCCEEEeCCCCcccHHHHHHHHHHHhCCCccccccc---------------------------CCCC---C--
Confidence 22 3578999999999999999999999999865422100 1100 0
Q ss_pred HHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 244 YKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 244 ~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
......+|++|++++|||+|+++++++|+++++||+++
T Consensus 277 --~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 277 --HDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp --CCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred --chhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 01234689999999999999999999999999999875
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-29 Score=233.44 Aligned_cols=213 Identities=19% Similarity=0.146 Sum_probs=180.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.|++++|++.++ |+||+||.. +||+....+.+|+++..| .+.|+.||..+|++++++.
T Consensus 74 ~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~-vy~~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~-- 145 (287)
T 3sc6_A 74 KERDLAYVINAIGARNVAVASQLVGA-KLVYISTDY-VFQGDRPEGYDEFHNPAP----INIYGASKYAGEQFVKELH-- 145 (287)
T ss_dssp TCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GSCCCCSSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhh-hcCCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHhC--
Confidence 57788999999999999999999998 799999998 699888888999998877 7899999999999999985
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
.+++++||+.||||++.+.++.++..+..+......|+ +.++|+|++|+|++++.+++
T Consensus 146 ---------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~----------- 203 (287)
T 3sc6_A 146 ---------NKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIH----------- 203 (287)
T ss_dssp ---------SSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHT-----------
T ss_pred ---------CCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHh-----------
Confidence 36799999999999888888899998888887777664 78899999999999999997
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHh
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+.+..++|.... +.... .
T Consensus 204 ~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------------------~~~~~-------~ 251 (287)
T 3sc6_A 204 TSL--YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEF-----------------------GAAAA-------R 251 (287)
T ss_dssp SCC--CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHH-----------------------CCSSC-------C
T ss_pred CCC--CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhc-----------------------CcccC-------C
Confidence 333 679999999999999999999999998866655554311 00000 0
Q ss_pred ccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 247 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 247 ~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
.....+|++|++ +|||.|.++++++++++++|+++
T Consensus 252 ~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~ 286 (287)
T 3sc6_A 252 PKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKS 286 (287)
T ss_dssp CSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC-
T ss_pred CCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhc
Confidence 123468999999 89999999999999999999864
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-29 Score=239.90 Aligned_cols=223 Identities=20% Similarity=0.203 Sum_probs=178.9
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+++..+++|+.|+.|++++|++.++ +|+||+||.+ +||.....+.+|+++..| .+.|+.||..+|++++++.
T Consensus 103 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~-v~g~~~~~~~~E~~~~~p----~~~Y~~sK~~~e~~~~~~~ 177 (335)
T 1rpn_A 103 WNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE-MFGLIQAERQDENTPFYP----RSPYGVAKLYGHWITVNYR 177 (335)
T ss_dssp TTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHH
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHH-HhCCCCCCCCCcccCCCC----CChhHHHHHHHHHHHHHHH
Confidence 346778899999999999999999997 9999999988 699877777889988776 6899999999999999875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC-C----HHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~----~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
. +.+++++++||+++|||+... . +..++..+..|.. ...+|++++.++|+|++|+|++++.+++
T Consensus 178 ~-------~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~--- 247 (335)
T 1rpn_A 178 E-------SFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ--- 247 (335)
T ss_dssp H-------HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH---
T ss_pred H-------HcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHh---
Confidence 2 247999999999999997653 3 4456666677763 3456899999999999999999999997
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC-ccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~-~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+.+ ...++. +.
T Consensus 248 --------~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------------------~~ 289 (335)
T 1rpn_A 248 --------QDK--ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP----------------------------AF 289 (335)
T ss_dssp --------SSS--CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECG----------------------------GG
T ss_pred --------cCC--CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccc----------------------------cc
Confidence 322 479999999999999999999999997532 111110 00
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
..+.+ .....+|++|++++|||+|+++++++|+++++||+++.+
T Consensus 290 ~~~~~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 333 (335)
T 1rpn_A 290 FRPAE----VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRRVS 333 (335)
T ss_dssp CCSSC----CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCc----chhhcCCHHHHHHhcCCCcCCCHHHHHHHHHHHHHHhhc
Confidence 00000 123468999999999999999999999999999987643
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=237.98 Aligned_cols=223 Identities=18% Similarity=0.198 Sum_probs=177.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++.++++|+.++.|++++|++.+++|+||+||.. +||.....+.+|+.+..| ..+.|+.||..+|++++.+..
T Consensus 99 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~~~~~~E~~~~~p---~~~~Y~~sK~~~e~~~~~~~~- 173 (348)
T 1ek6_A 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSAT-VYGNPQYLPLDEAHPTGG---CTNPYGKSKFFIEEMIRDLCQ- 173 (348)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GGCSCSSSSBCTTSCCCC---CSSHHHHHHHHHHHHHHHHHH-
T ss_pred hchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH-HhCCCCCCCcCCCCCCCC---CCCchHHHHHHHHHHHHHHHh-
Confidence 456788999999999999999999999999999988 698776677888887544 257999999999999998752
Q ss_pred CCCCCCCCCceEEEEecCceecCCC------------CCCHHHHHHHHH-cCCCcceec------CCCccccceeHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGE------------ERHLPRIVSLAK-LGLVPFKIG------EPSVKTDWIYVDNLV 147 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~------------~~~~~~li~~~~-~g~~~~~~g------~~~~~~~~v~vdDla 147 (389)
.+.+++++++||++||||+. ...++.++..+. .+..+.++| ++++.++|+|++|+|
T Consensus 174 -----~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva 248 (348)
T 1ek6_A 174 -----ADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248 (348)
T ss_dssp -----HCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred -----cCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHH
Confidence 11359999999999999952 223556666666 566666666 678889999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCC-ceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhh
Q 016468 148 LALILASMGLLDDIPGQKGRPIASG-QPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYP 226 (389)
Q Consensus 148 ~a~~~a~~~l~~~~~~~~~~~~~~g-~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~ 226 (389)
++++.+++. .....| ++||+++++++|+.|+++.+.+.+|.+.+...+|..
T Consensus 249 ~a~~~~~~~----------~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------------------ 300 (348)
T 1ek6_A 249 KGHIAALRK----------LKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR------------------ 300 (348)
T ss_dssp HHHHHHHHH----------HTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC------------------
T ss_pred HHHHHHHhc----------ccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC------------------
Confidence 999999873 111234 899999999999999999999999987654433311
Q ss_pred ccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 227 WLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+. + .....+|++|++++|||+|+++++++++++++||+++.
T Consensus 301 -------~~------~----~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 341 (348)
T 1ek6_A 301 -------EG------D----VAACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNP 341 (348)
T ss_dssp -------TT------C----CSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred -------Cc------c----chhhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence 00 0 12347899999999999999999999999999998764
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=238.24 Aligned_cols=217 Identities=21% Similarity=0.247 Sum_probs=179.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCC-----CCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESL-----PYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~-----p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++..+++|+.++.|++++|++.++ |+||+||.. +||.....+.+|+. |..| .+.|+.||..+|++++
T Consensus 109 ~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~g~~~~~~~~E~~~~~~~~~~~----~~~Y~~sK~~~E~~~~ 182 (343)
T 2b69_A 109 YNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE-VYGDPEVHPQSEDYWGHVNPIGP----RACYDEGKRVAETMCY 182 (343)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGG-GGBSCSSSSBCTTCCCBCCSSST----THHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHH-HhCCCCCCCCcccccccCCCCCC----CCchHHHHHHHHHHHH
Confidence 46678899999999999999999997 999999988 69877666677763 3333 6789999999999998
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.. +.+++++++||+.||||+.. +.++.++..+..+....+++++++.++|+|++|+|++++.+++
T Consensus 183 ~~~~-------~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~-- 253 (343)
T 2b69_A 183 AYMK-------QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN-- 253 (343)
T ss_dssp HHHH-------HHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT--
T ss_pred HHHH-------HhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHh--
Confidence 8752 25799999999999999753 3567788888888877778999999999999999999999886
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+ .+++||+++++++|+.|+++.+.+.+|.+.+...+|.. ...
T Consensus 254 ---------~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~------------------------~~~-- 296 (343)
T 2b69_A 254 ---------SN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA------------------------QDD-- 296 (343)
T ss_dssp ---------SS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC------------------------TTC--
T ss_pred ---------cC--CCCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCC------------------------CCC--
Confidence 22 36799999999999999999999999987665444421 000
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.....+|++|++++|||+|+++++++|+++++||+++.
T Consensus 297 ---------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 334 (343)
T 2b69_A 297 ---------PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 334 (343)
T ss_dssp ---------CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ---------CceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 11346899999999999998899999999999998754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=238.97 Aligned_cols=217 Identities=15% Similarity=0.130 Sum_probs=179.1
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++.++++|+.++.|++++|.+.++ |+||+||.. +||.....+.+|+++..| .+.|+.||..+|++++.+..
T Consensus 130 ~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~-v~g~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~~ 203 (357)
T 2x6t_A 130 EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAA-TYGGRTSDFIESREYEKP----LNVFGYSKFLFDEYVRQILP 203 (357)
T ss_dssp CCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGG-GGCSCSSCCCSSGGGCCC----SSHHHHHHHHHHHHHHHHGG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchH-HhCCCCCCCcCCcCCCCC----CChhHHHHHHHHHHHHHHHH
Confidence 346778999999999999999999999 999999998 698877667889887766 68999999999999999863
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCc-cccceeHHHHHHHHHHHHhccc
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSV-KTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~-~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+.+++++++||+.||||++. ..++.++..+..+.....++++++ .++|+|++|+|++++.+++
T Consensus 204 -------~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~--- 273 (357)
T 2x6t_A 204 -------EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE--- 273 (357)
T ss_dssp -------GCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHH---
T ss_pred -------HcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHh---
Confidence 35899999999999999865 456788888888887777888888 9999999999999999997
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCC-CCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYD-LPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~-~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+ .+..+.|.+. .
T Consensus 274 --------~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~------------------------~--- 316 (357)
T 2x6t_A 274 --------NGV--SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL------------------------K--- 316 (357)
T ss_dssp --------HCC--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGG------------------------T---
T ss_pred --------cCC--CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCccc------------------------c---
Confidence 333 7899999999999999999999999986 2222222110 0
Q ss_pred CCHHHHHHhccccccchHHHHHhCCC-CCCCChHHHHHHHHHHHHH
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCY-VPIVSPREGMAATISYWQD 282 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~-~p~~sl~~~l~~~v~~~~~ 282 (389)
........+|++|+++ ||| .|.++++++|+++++||++
T Consensus 317 ------~~~~~~~~~~~~k~~~-lG~~~~~~~l~e~l~~~~~~~~~ 355 (357)
T 2x6t_A 317 ------GRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAWLNR 355 (357)
T ss_dssp ------TSCCSBCCCCCHHHHH-TTCCCCCCCHHHHHHHHHHHHC-
T ss_pred ------cccccccccCHHHHHH-cCCCCCCCCHHHHHHHHHHHHhh
Confidence 0011234679999986 999 7888999999999999965
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=239.82 Aligned_cols=219 Identities=19% Similarity=0.160 Sum_probs=179.7
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc-----CCCCCCC--CCCCCCCCCCcHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI-----VNGNESL--PYFPIDEHVDSYGRSKSVAEQ 78 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~-----~~~~E~~--p~~p~~~~~~~Y~~SK~~aE~ 78 (389)
..+++..+++|+.++.|++++|++.+++||||+||.+ +|+.... .+.+|++ +..| .+.|+.||..+|+
T Consensus 111 ~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~-v~~~~~~~~~~~~~~~E~~~~~~~~----~~~Y~~sK~~~E~ 185 (379)
T 2c5a_A 111 QSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSAC-IYPEFKQLETTNVSLKESDAWPAEP----QDAFGLEKLATEE 185 (379)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGG-GSCGGGSSSSSSCEECGGGGSSBCC----SSHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehh-eeCCCCCCCccCCCcCcccCCCCCC----CChhHHHHHHHHH
Confidence 4567888999999999999999999999999999988 6876432 2356665 3334 6899999999999
Q ss_pred HHHHhCCCCCCCCCCCCceEEEEecCceecCCCCC------CHHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHH
Q 016468 79 LVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 79 ~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~------~~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+++.+.. +.+++++++||+.||||+... .++.++..+..+.. +.++|++++.++|+|++|+|++++
T Consensus 186 ~~~~~~~-------~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~ 258 (379)
T 2c5a_A 186 LCKHYNK-------DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL 258 (379)
T ss_dssp HHHHHHH-------HHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred HHHHHHH-------HHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHH
Confidence 9988752 247999999999999997652 46778888877765 667899999999999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
.+++ .+ .+++||+++++++|+.|+++.+.+.+|.+.+...+|.+
T Consensus 259 ~~l~-----------~~--~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~----------------------- 302 (379)
T 2c5a_A 259 RLTK-----------SD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP----------------------- 302 (379)
T ss_dssp HHHH-----------SS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC-----------------------
T ss_pred HHhh-----------cc--CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCC-----------------------
Confidence 9997 32 46799999999999999999999999987665444421
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.. .....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 303 --~~-----------~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 343 (379)
T 2c5a_A 303 --EG-----------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIE 343 (379)
T ss_dssp --CC-----------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred --CC-----------cccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhHh
Confidence 00 113468999999999999999999999999999987543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=236.13 Aligned_cols=217 Identities=20% Similarity=0.273 Sum_probs=179.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc------------CCCCCCCCCCCCCCCCCcHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI------------VNGNESLPYFPIDEHVDSYGRSKS 74 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~------------~~~~E~~p~~p~~~~~~~Y~~SK~ 74 (389)
.+++.++++|+.||.|++++|.+.++ |+||+||.. +||.... .+.+|++|..| .+.|+.||.
T Consensus 93 ~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~-vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~----~~~Y~~sK~ 166 (348)
T 1oc2_A 93 NDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDE-VYGDLPLREDLPGHGEGPGEKFTAETNYNP----SSPYSSTKA 166 (348)
T ss_dssp HCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GGCCBCCGGGSTTTTCSTTSSBCTTSCCCC----CSHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccc-eeCCCcccccccccccccCCCcCCCCCCCC----CCccHHHHH
Confidence 46678899999999999999999998 999999998 6886532 56788877666 689999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 75 VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 75 ~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.+|++++.+.. +.+++++++||+.||||+.. ..++.++..+..+....+++++++.++|+|++|+|++++.
T Consensus 167 ~~e~~~~~~~~-------~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 239 (348)
T 1oc2_A 167 ASDLIVKAWVR-------SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 239 (348)
T ss_dssp HHHHHHHHHHH-------HHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHH
Confidence 99999998752 24799999999999999874 4467788888888877788999999999999999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccc-cCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
+++ .+ ..|++||+++++++++.|+++.+.+.+|.+.+.+. .+
T Consensus 240 ~~~-----------~~-~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~------------------------- 282 (348)
T 1oc2_A 240 ILT-----------KG-RMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT------------------------- 282 (348)
T ss_dssp HHH-----------HC-CTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEEC-------------------------
T ss_pred Hhh-----------CC-CCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCC-------------------------
Confidence 987 22 35789999999999999999999999997754221 10
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCC-hHHHHHHHHHHHHHc
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYWQDR 283 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~s-l~~~l~~~v~~~~~~ 283 (389)
..+. ......+|++|++++|||+|+++ ++++|+++++||+++
T Consensus 283 --~~~~--------~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 283 --DRAG--------HDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp --CCTT--------CCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred --CCCC--------cccccccCHHHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 0110 01234689999999999999988 999999999999874
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-28 Score=241.33 Aligned_cols=226 Identities=17% Similarity=0.136 Sum_probs=174.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcc-------cCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-------IVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~-------~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+++.++++|+.++.|++++|++.+++||||+||.+ +||... ..+.+|+++..| .+.|+.||..+|++
T Consensus 111 ~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~~~~~~E~~~~~p----~~~Y~~sK~~~e~~ 185 (397)
T 1gy8_A 111 RDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAA-IFGNPTMGSVSTNAEPIDINAKKSP----ESPYGESKLIAERM 185 (397)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GTBSCCC-----CCCCBCTTSCCBC----SSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHH-HhCCCCcccccccccCcCccCCCCC----CCchHHHHHHHHHH
Confidence 456788999999999999999999999999999987 688765 467788887666 68999999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCC-----------CCHHHHH----HHHHcCC------------Ccceec
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----------RHLPRIV----SLAKLGL------------VPFKIG 132 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----------~~~~~li----~~~~~g~------------~~~~~g 132 (389)
++.+.. +.+++++++||+.||||+.. ..++.++ ..+..+. .+.++|
T Consensus 186 ~~~~~~-------~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 258 (397)
T 1gy8_A 186 IRDCAE-------AYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFG 258 (397)
T ss_dssp HHHHHH-------HHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEEC
T ss_pred HHHHHH-------HHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeec
Confidence 998752 24799999999999999642 2344444 2444443 345566
Q ss_pred ------CCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCC---ceEEEeCCCCCChHHHHHHHHHhCCCCCCcc
Q 016468 133 ------EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG---QPYFVSDGFPINTFEFIGPLLKTLDYDLPKS 203 (389)
Q Consensus 133 ------~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g---~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~ 203 (389)
++++.++|||++|+|++++.+++..... .+...+ ++||+++++++|+.|+++.+.+.+|.+.+..
T Consensus 259 ~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~------~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~ 332 (397)
T 1gy8_A 259 TDYPTPDGTCVRDYVHVCDLASAHILALDYVEKL------GPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVR 332 (397)
T ss_dssp SCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTC------CTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEE
T ss_pred CcccCCCCCeeEeeEeHHHHHHHHHHHHhccccc------ccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCCCCee
Confidence 6788999999999999999998731100 000013 7999999999999999999999999876543
Q ss_pred ccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCC-ChHHHHHHHHHHHHH
Q 016468 204 WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQD 282 (389)
Q Consensus 204 ~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~~~~~ 282 (389)
..|.. +.. .....+|++|++++|||+|++ +++++|+++++||++
T Consensus 333 ~~~~~-------------------------~~~----------~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~ 377 (397)
T 1gy8_A 333 ECGRR-------------------------EGD----------PAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRT 377 (397)
T ss_dssp EECCC-------------------------TTC----------CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHT
T ss_pred eCCCC-------------------------CCc----------ccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHh
Confidence 33210 000 113478999999999999999 999999999999987
Q ss_pred ccc
Q 016468 283 RKR 285 (389)
Q Consensus 283 ~~~ 285 (389)
+..
T Consensus 378 ~~~ 380 (397)
T 1gy8_A 378 HPN 380 (397)
T ss_dssp CTT
T ss_pred ccc
Confidence 643
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=235.25 Aligned_cols=221 Identities=19% Similarity=0.186 Sum_probs=175.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC-eEEEecCCceecCCcccCC----------------CCCCCCCCCCCCCCCcH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVN----------------GNESLPYFPIDEHVDSY 69 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk-rlV~~SS~~vvyg~~~~~~----------------~~E~~p~~p~~~~~~~Y 69 (389)
.+++..+++|+.||.|++++|.+.+++ |+||+||.+ +||.....+ .+|+.+..| .+.|
T Consensus 91 ~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~-v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~----~~~Y 165 (347)
T 1orr_A 91 DNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNK-VYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF----HSPY 165 (347)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGG-GGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC----CHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHH-HhCCCCcCCcccccccccccccccCccccCCCCC----CCch
Confidence 366788999999999999999999986 999999998 688654322 455555544 6899
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHHcCC-----CcceecCCCcccc
Q 016468 70 GRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGL-----VPFKIGEPSVKTD 139 (389)
Q Consensus 70 ~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~~g~-----~~~~~g~~~~~~~ 139 (389)
+.||..+|++++.+.. +.|++++++||+.||||+.. +.++.++..+..+. +...+|++++.++
T Consensus 166 ~~sK~~~E~~~~~~~~-------~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 238 (347)
T 1orr_A 166 GCSKGAADQYMLDYAR-------IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 238 (347)
T ss_dssp HHHHHHHHHHHHHHHH-------HHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred HHHHHHHHHHHHHHHH-------HhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEe
Confidence 9999999999998752 24799999999999999764 23566766666554 5667899999999
Q ss_pred ceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCC--CCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHH
Q 016468 140 WIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGF--PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVF 217 (389)
Q Consensus 140 ~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~--~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~ 217 (389)
|+|++|+|++++.+++. .+...|++||+++++ ++|+.|+++.+.+.+|.+.+....|..
T Consensus 239 ~i~v~Dva~a~~~~~~~----------~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------- 299 (347)
T 1orr_A 239 VLHAEDMISLYFTALAN----------VSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR--------- 299 (347)
T ss_dssp CEEHHHHHHHHHHHHHT----------HHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC---------
T ss_pred eEEHHHHHHHHHHHHhc----------cccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCC---------
Confidence 99999999999999861 123468899999987 599999999999999987655443310
Q ss_pred HHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 218 SFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+.. .....+|++|++++|||+|+++++++|+++++|++++.
T Consensus 300 ----------------~~~----------~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 340 (347)
T 1orr_A 300 ----------------ESD----------QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSIL 340 (347)
T ss_dssp ----------------SSC----------CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred ----------------CCC----------cceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence 000 11246899999999999998899999999999998743
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-28 Score=226.46 Aligned_cols=211 Identities=16% Similarity=0.113 Sum_probs=174.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.|++++|++.++ |+||+||.. +|++....+.+|+++..| .+.|+.||..+|++++++.
T Consensus 81 ~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~-v~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~E~~~~~~~-- 152 (292)
T 1vl0_A 81 EQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDY-VFDGEAKEPITEFDEVNP----QSAYGKTKLEGENFVKALN-- 152 (292)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GSCSCCSSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHH-eECCCCCCCCCCCCCCCC----ccHHHHHHHHHHHHHHhhC--
Confidence 46778899999999999999999998 999999998 698877677889888766 6899999999999999985
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
.+++++||+.|||| +.+.++.++..+..+......| ++..+++|++|+|++++.+++
T Consensus 153 ---------~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~----------- 209 (292)
T 1vl0_A 153 ---------PKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVID----------- 209 (292)
T ss_dssp ---------SSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHH-----------
T ss_pred ---------CCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHh-----------
Confidence 36899999999999 5566777888888787665555 477899999999999999997
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHh
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (389)
.+ .+++||+++++++|+.|+++.+.+.+|.+.+...+|.+.. +.+.. .
T Consensus 210 ~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------------------~~~~~-------~ 257 (292)
T 1vl0_A 210 EK--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEF-----------------------PRPAK-------R 257 (292)
T ss_dssp HT--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTS-----------------------CCSSC-------C
T ss_pred cC--CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeecccccc-----------------------CcccC-------C
Confidence 33 5789999999999999999999999998755544443200 00000 0
Q ss_pred ccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 247 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 247 ~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
.....+|++|++++|||+|+ +++++|+++++||+
T Consensus 258 ~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~ 291 (292)
T 1vl0_A 258 PKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 291 (292)
T ss_dssp CSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred CccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhc
Confidence 12347899999999999999 99999999999985
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=230.81 Aligned_cols=223 Identities=17% Similarity=0.151 Sum_probs=170.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+++..+++|+.|+.+++++|++.+++|+|++||.. +||.....+.+|+.+..| +.+.|+.||..+|++++.+...
T Consensus 92 ~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~-~~g~~~~~~~~e~~~~~~---~~~~Y~~sK~~~e~~~~~~~~~- 166 (338)
T 1udb_A 92 KPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSAT-VYGDNPKIPYVESFPTGT---PQSPYGKSKLMVEQILTDLQKA- 166 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCCSSSBCTTSCCCC---CSSHHHHHHHHHHHHHHHHHHH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHH-HhCCCCCCCcCcccCCCC---CCChHHHHHHHHHHHHHHHHHh-
Confidence 45678899999999999999999999999999988 698766667788776533 2579999999999999987521
Q ss_pred CCCCCCCCceEEEEecCceecCCC------------CCCHHHHHHHHH-cCCCcceec------CCCccccceeHHHHHH
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGE------------ERHLPRIVSLAK-LGLVPFKIG------EPSVKTDWIYVDNLVL 148 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~------------~~~~~~li~~~~-~g~~~~~~g------~~~~~~~~v~vdDla~ 148 (389)
..+++++++||+++|||+. ...++.++..+. .+..+.++| ++++.++|+|++|+|+
T Consensus 167 -----~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~ 241 (338)
T 1udb_A 167 -----QPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLAD 241 (338)
T ss_dssp -----STTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHH
T ss_pred -----cCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHH
Confidence 1379999999999999842 112445554444 344444444 5678899999999999
Q ss_pred HHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcc
Q 016468 149 ALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWL 228 (389)
Q Consensus 149 a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~ 228 (389)
+++.+++.. .....+++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 242 a~~~~l~~~---------~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-------------------- 292 (338)
T 1udb_A 242 GHVVAMEKL---------ANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR-------------------- 292 (338)
T ss_dssp HHHHHHHHH---------TTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCC--------------------
T ss_pred HHHHHHhhh---------hccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCC--------------------
Confidence 999998731 011223799999999999999999999999976554332210
Q ss_pred ccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 229 NRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+.. .....+|++|++++|||+|+++++++++++++||+++.
T Consensus 293 -----~~~----------~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 333 (338)
T 1udb_A 293 -----EGD----------LPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp -----TTC----------CSBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred -----CCc----------hhhhhcCHHHHHHHcCCCcCCCHHHHHHHHHHHHHhcc
Confidence 000 01246899999999999999999999999999998754
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-28 Score=230.90 Aligned_cols=224 Identities=13% Similarity=0.024 Sum_probs=177.3
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++..+++|+.++.|++++|++.++ |+||+||.. +||+....+.+|+++..| .+.|+.||..+|++++++.
T Consensus 71 ~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-vy~~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~- 143 (299)
T 1n2s_A 71 ESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDY-VFPGTGDIPWQETDATSP----LNVYGKTKLAGEKALQDNC- 143 (299)
T ss_dssp TTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGG-GSCCCTTCCBCTTSCCCC----SSHHHHHHHHHHHHHHHHC-
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEeccc-EEeCCCCCCCCCCCCCCC----ccHHHHHHHHHHHHHHHhC-
Confidence 456788899999999999999999998 899999998 699877777889888766 6899999999999999985
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
.+++++||+.||||+..+.++.++..+..+......|+ +.++|+|++|+|++++.+++.
T Consensus 144 ----------~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~--------- 202 (299)
T 1n2s_A 144 ----------PKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIND--QYGAPTGAELLADCTAHAIRV--------- 202 (299)
T ss_dssp ----------SSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECS--CEECCEEHHHHHHHHHHHHHH---------
T ss_pred ----------CCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecC--cccCCeeHHHHHHHHHHHHHH---------
Confidence 37999999999999887777888888888876666654 789999999999999999872
Q ss_pred CCC--CC-CCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHH
Q 016468 166 GRP--IA-SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAE 242 (389)
Q Consensus 166 ~~~--~~-~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (389)
+ .. .+++||+++++++|+.|+++.+.+.+|.+.+...+|.. .+ .+......
T Consensus 203 --~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------------~~------~~~~~~~~-- 256 (299)
T 1n2s_A 203 --ALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTEL----------------NA------VPTSAYPT-- 256 (299)
T ss_dssp --HHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEE----------------EE------ECSTTSCC--
T ss_pred --hccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccc----------------cc------cccccccC--
Confidence 2 12 47899999999999999999999999876422111100 00 00000000
Q ss_pred HHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 243 VYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 243 ~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.........+|++|++++|||+|+ +++++|+++++||+++.
T Consensus 257 ~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~~~~ 297 (299)
T 1n2s_A 257 PASRPGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTTT 297 (299)
T ss_dssp SSCCCSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSCC
T ss_pred cCCCCCceeeeHHHHHHhcCCCCC-CHHHHHHHHHHHHHhcC
Confidence 000013457899999999999998 99999999999998643
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.7e-28 Score=237.13 Aligned_cols=217 Identities=18% Similarity=0.172 Sum_probs=173.4
Q ss_pred hhhHhhhhHHHHHHHHHHHcCC-CeEEEecCCceecCCcccCCCCCC--------------CCCCCCCCCCCcHHHHHHH
Q 016468 11 RVDEVNINGTCHVIEACLEFGI-QRLVYVSTYNVVFGGKEIVNGNES--------------LPYFPIDEHVDSYGRSKSV 75 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~gv-krlV~~SS~~vvyg~~~~~~~~E~--------------~p~~p~~~~~~~Y~~SK~~ 75 (389)
..+++|+.||.|++++|++.++ +|+||+||.+ +||... .+.+|+ .+..| .+.|+.||..
T Consensus 125 ~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~-vyg~~~-~~~~E~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~~ 198 (404)
T 1i24_A 125 YTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTPN-IDIEEGYITITHNGRTDTLPYPKQA----SSFYHLSKVH 198 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCCS-SCBCSSEEEEEETTEEEEEECCCCC----CSHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHH-HhCCCC-CCCCccccccccccccccccCCCCC----CChhHHHHHH
Confidence 4789999999999999999998 5999999988 698654 345564 23333 6899999999
Q ss_pred HHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-------------------CCHHHHHHHHHcCCCcceecCCCc
Q 016468 76 AEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGEPSV 136 (389)
Q Consensus 76 aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------------------~~~~~li~~~~~g~~~~~~g~~~~ 136 (389)
+|++++.+.. ..+++++++||+.||||++. ..++.++..+..|....++|++++
T Consensus 199 ~e~~~~~~~~-------~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~ 271 (404)
T 1i24_A 199 DSHNIAFTCK-------AWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQ 271 (404)
T ss_dssp HHHHHHHHHH-------HHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCC
T ss_pred HHHHHHHHHH-------hcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCc
Confidence 9999988752 24799999999999999863 357888888888987778899999
Q ss_pred cccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCC--ceEEEeCCCCCChHHHHHHHHHh---CCCCCCccccCHHHHH
Q 016468 137 KTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG--QPYFVSDGFPINTFEFIGPLLKT---LDYDLPKSWLAVPHAL 211 (389)
Q Consensus 137 ~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g--~~y~i~~~~~~s~~e~~~~l~~~---lg~~~~~~~~p~~~~~ 211 (389)
.++|+|++|+|++++.+++ .+...| ++||+++ +++|+.|+++.+.+. +|.+.+...+|.+
T Consensus 272 ~~~~i~v~Dva~a~~~~l~-----------~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~p~~--- 336 (404)
T 1i24_A 272 TRGYLDIRDTVQCVEIAIA-----------NPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVKKMTVPNP--- 336 (404)
T ss_dssp EEEEEEHHHHHHHHHHHHH-----------SCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCCEEEECCS---
T ss_pred eECcEEHHHHHHHHHHHHh-----------CcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCccccccCcc---
Confidence 9999999999999999997 333345 7999998 889999999999998 7877554444321
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 212 FLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 212 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
... .......+|++|++ +|||+|+++++++++++++|++...+.
T Consensus 337 -------------------------~~~-----~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~ 380 (404)
T 1i24_A 337 -------------------------RVE-----AEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDR 380 (404)
T ss_dssp -------------------------SCS-----CSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred -------------------------cCc-----cccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhc
Confidence 000 00112357999998 799999999999999999999875543
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=232.44 Aligned_cols=233 Identities=16% Similarity=0.156 Sum_probs=177.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCccc-CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEI-VNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~-~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+++..+++|+.|+.|++++|.+.+ ++|+||+||.. +||.... .+.+|+++..| .+.|+.||..+|++++.+.
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~-vyg~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~ 172 (357)
T 1rkx_A 98 SEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-CYDNKEWIWGYRENEAMGG----YDPYSNSKGCAELVTSSYR 172 (357)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-GBCCCCSSSCBCTTSCBCC----SSHHHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHH-HhCCCCcCCCCCCCCCCCC----CCccHHHHHHHHHHHHHHH
Confidence 4567889999999999999999987 89999999998 6887543 35677777655 6899999999999999874
Q ss_pred CCCCC--CCCCCCceEEEEecCceecCCCC---CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 85 GRPFK--KNNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 85 ~~~~~--~~~~~gl~~~ilRp~~IyGp~~~---~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..... +..+.+++++++||+.||||++. +.++.++..+..|.... ++++++.++|+|++|+|++++.+++....
T Consensus 173 ~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~v~v~Dva~a~~~~~~~~~~ 251 (357)
T 1rkx_A 173 NSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVI-IRNPHAIRPWQHVLEPLSGYLLLAQKLYT 251 (357)
T ss_dssp HHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEE-CSCTTCEECCEETHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEE-ECCCCCeeccEeHHHHHHHHHHHHHhhhh
Confidence 21000 00012799999999999999874 45788888888888654 45678889999999999999999863110
Q ss_pred CCCCCCCCCCCCCceEEEeCC--CCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG--FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~--~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+...+++||++++ +++|+.|+++.+.+.+|.+.+....+. +.
T Consensus 252 -------~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------------~~-- 296 (357)
T 1rkx_A 252 -------DGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN--------------------------AH-- 296 (357)
T ss_dssp -------TCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------------------------
T ss_pred -------cCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCC--------------------------CC--
Confidence 11235789999974 689999999999999997654321110 00
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
+ .......+|++|++++|||+|+++++++|+++++||+++...
T Consensus 297 --~----~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 339 (357)
T 1rkx_A 297 --P----HEAHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLSG 339 (357)
T ss_dssp --------CCCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred --C----cCcccccCCHHHHHHHhCCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 0 012234799999999999999999999999999999876543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=236.86 Aligned_cols=226 Identities=20% Similarity=0.258 Sum_probs=180.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCC-------eEEEecCCceecCCccc--C--------CCCCCCCCCCCCCCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQ-------RLVYVSTYNVVFGGKEI--V--------NGNESLPYFPIDEHVD 67 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvk-------rlV~~SS~~vvyg~~~~--~--------~~~E~~p~~p~~~~~~ 67 (389)
.+++.++++|+.||.|++++|.+. +++ ||||+||.+ +||.... . +.+|+.|..| .+
T Consensus 91 ~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~-v~g~~~~~~~~~~~~~~~~~~E~~~~~~----~~ 165 (361)
T 1kew_A 91 TGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFTETTAYAP----SS 165 (361)
T ss_dssp HCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGSCTTSCCCCBCTTSCCCC----CS
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHH-HhCCCcccccccccccCCCCCCCCCCCC----CC
Confidence 466789999999999999999998 988 999999998 6886532 1 5678877666 68
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 68 SYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 68 ~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
.|+.||..+|++++.+.. +.+++++++||+.||||+.. ..++.++..+..+....+++++++.++++|++|
T Consensus 166 ~Y~~sK~~~e~~~~~~~~-------~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 238 (361)
T 1kew_A 166 PYSASKASSDHLVRAWRR-------TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred ccHHHHHHHHHHHHHHHH-------HhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHH
Confidence 999999999999998752 24799999999999999874 346778888888887778899999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLY 225 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~ 225 (389)
+|++++.+++ .+ ..|++||+++++++|+.|+++.+.+.+|.+.+... |..
T Consensus 239 va~a~~~~~~-----------~~-~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~----------------- 288 (361)
T 1kew_A 239 HARALHMVVT-----------EG-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYR----------------- 288 (361)
T ss_dssp HHHHHHHHHH-----------HC-CTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGG-----------------
T ss_pred HHHHHHHHHh-----------CC-CCCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccc-----------------
Confidence 9999999987 22 35889999999999999999999999986544221 210
Q ss_pred hccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 226 PWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
..+. +.+... . ......+|++|++++|||+|+++++++|+++++||+++
T Consensus 289 ~~~~--~~~~~~---~----~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 289 EQIT--YVADRP---G----HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp GGEE--EECCCT---T----CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred ccee--ecCCCC---c----ccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 0000 001100 0 01234689999999999999999999999999999875
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-28 Score=229.05 Aligned_cols=217 Identities=13% Similarity=0.090 Sum_probs=167.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcc-cCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~-~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++..+++|+.++.|++++|++.+++|+||+||.+ +|+... ..+.+|+.+..| .+.|+.||..+|++++.+..
T Consensus 85 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~-~~~~~~~~~~~~e~~~~~~----~~~Y~~sK~~~e~~~~~~~~ 159 (312)
T 2yy7_A 85 KNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIA-VFGPTTPKENTPQYTIMEP----STVYGISKQAGERWCEYYHN 159 (312)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGG-GCCTTSCSSSBCSSCBCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred hChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHH-HhCCCCCCCCccccCcCCC----CchhHHHHHHHHHHHHHHHH
Confidence 466788999999999999999999999999999998 688643 245677777666 78999999999999988752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC------C-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE------R-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~------~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+.+++++++||+.||||+.. . ..+.+...+..+. ...++++++.++|+|++|+|++++.+++
T Consensus 160 -------~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~a~~~~~~--- 228 (312)
T 2yy7_A 160 -------IYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKK-YECFLSSETKMPMMYMDDAIDATINIMK--- 228 (312)
T ss_dssp -------HHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSE-EEESSCTTCCEEEEEHHHHHHHHHHHHH---
T ss_pred -------hcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCC-eEEecCCCceeeeeeHHHHHHHHHHHHh---
Confidence 24799999999999997532 1 2334444454444 5567888899999999999999999997
Q ss_pred CCCCCCCCCCCC---CCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 016468 159 DDIPGQKGRPIA---SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 235 (389)
Q Consensus 159 ~~~~~~~~~~~~---~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 235 (389)
.+.. .|++||+++ +++|+.|+++.+.+.+|. .+....| .
T Consensus 229 --------~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~----------------------------~ 270 (312)
T 2yy7_A 229 --------APVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEP----------------------------D 270 (312)
T ss_dssp --------SCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECC----------------------------C
T ss_pred --------CcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEecc----------------------------C
Confidence 2222 258999986 889999999999999982 1111111 1
Q ss_pred CCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 236 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
.+.... ......+|++|++++|||+|+++++++|+++++||+
T Consensus 271 ---~~~~~~-~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 271 ---FRQKIA-DSWPASIDDSQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp ---THHHHH-TTSCSSBCCHHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred ---cccccc-ccccccCCHHHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 111111 112347899999999999999999999999999984
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.7e-28 Score=227.50 Aligned_cols=204 Identities=19% Similarity=0.172 Sum_probs=164.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++...++|+.++.|++++|++.+++||||+||.+ +||.....+.+|+++..| .+.|+.||..+|++ +++
T Consensus 76 ~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~-~~~--- 146 (286)
T 3gpi_A 76 YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTG-VYGQEVEEWLDEDTPPIA----KDFSGKRMLEAEAL-LAA--- 146 (286)
T ss_dssp HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGG-GCCCCCSSEECTTSCCCC----CSHHHHHHHHHHHH-GGG---
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccE-EEcCCCCCCCCCCCCCCC----CChhhHHHHHHHHH-Hhc---
Confidence 356778899999999999999999999999999998 799887778899998877 79999999999999 442
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
++++++||+.||||+.. .++..+.. . ..++++++.++|+|++|+|++++.+++..
T Consensus 147 ---------~~~~ilR~~~v~G~~~~----~~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~--------- 201 (286)
T 3gpi_A 147 ---------YSSTILRFSGIYGPGRL----RMIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQR--------- 201 (286)
T ss_dssp ---------SSEEEEEECEEEBTTBC----HHHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHH---------
T ss_pred ---------CCeEEEecccccCCCch----hHHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhh---------
Confidence 78999999999999876 34444444 2 23478889999999999999999999831
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHh
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (389)
.....+++||+++++++|+.|+++.+.+.+|.+.+....| ..
T Consensus 202 ~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~--------------------------------------~~ 243 (286)
T 3gpi_A 202 SHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP--------------------------------------PV 243 (286)
T ss_dssp TTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC--------------------------------------CB
T ss_pred ccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc--------------------------------------cc
Confidence 0134688999999999999999999999999876543211 01
Q ss_pred ccccccchHHHHHhCCCCCCC-ChHHHHHHHHHHHHHc
Q 016468 247 GVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQDR 283 (389)
Q Consensus 247 ~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~~~~~~ 283 (389)
..+..+|++|++ +|||+|++ +++++|+++++|++..
T Consensus 244 ~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~ 280 (286)
T 3gpi_A 244 QGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREG 280 (286)
T ss_dssp CSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred CCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhcc
Confidence 224478999998 89999998 6999999999998764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=233.45 Aligned_cols=240 Identities=18% Similarity=0.157 Sum_probs=179.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+++..+++|+.++.|++++|.+.++ +||||+||.. +|+.....+.+|+++..| .+.|+.||+.+|++++.+
T Consensus 120 ~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~-~~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~ 194 (375)
T 1t2a_A 120 DLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQEIPQKETTPFYP----RSPYGAAKLYAYWIVVNF 194 (375)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchh-hhCCCCCCCCCccCCCCC----CChhHHHHHHHHHHHHHH
Confidence 45677899999999999999999998 8999999998 698777677889888766 689999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC-C----HHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~----~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.. +.+++++++||+++|||+... . +..++..+..|.. ...+|++++.++|+|++|+|++++.+++
T Consensus 195 ~~-------~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~-- 265 (375)
T 1t2a_A 195 RE-------AYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ-- 265 (375)
T ss_dssp HH-------HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHH--
T ss_pred HH-------HhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHh--
Confidence 52 247999999999999997642 3 2445556666753 4457899999999999999999999997
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCcc--ccCHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 235 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~--~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 235 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+.+.. .+|.+++. + .+...... ...
T Consensus 266 ---------~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~--------~~~~~~~~--~~~ 322 (375)
T 1t2a_A 266 ---------NDE--PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRC--K--------ETGKVHVT--VDL 322 (375)
T ss_dssp ---------SSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--T--------TTCCEEEE--ECG
T ss_pred ---------cCC--CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccc--c--------ccccceee--cCc
Confidence 222 46899999999999999999999999764321 13322110 0 00000000 000
Q ss_pred CCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccCC
Q 016468 236 PLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~ 287 (389)
+...+.+ .....+|++|++++|||+|+++++++|+++++||++...+.
T Consensus 323 ~~~~~~~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 370 (375)
T 1t2a_A 323 KYYRPTE----VDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTN 370 (375)
T ss_dssp GGSCSSC----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCccc----chhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhccC
Confidence 0001100 12246799999999999999999999999999999866543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=221.66 Aligned_cols=222 Identities=16% Similarity=0.093 Sum_probs=167.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCc-ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGK-EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~-~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++..+++|+.++.|++++|++.+++|+||+||.. +|+.. +..+.+|+.+..| .+.|+.||..+|++++.+..
T Consensus 79 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~-~~~~~~~~~~~~e~~~~~p----~~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 79 KDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIG-VFGPETPKNKVPSITITRP----RTMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GCCTTSCSSSBCSSSCCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred cChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHH-HhCCCCCCCCccccccCCC----CchHHHHHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999998 68764 3345667776666 78999999999999988752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.+++++++||+++||++.. ..+..++.....+.....++++++.++|+|++|+|++++.+++
T Consensus 154 -------~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~---- 222 (317)
T 3ajr_A 154 -------KFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE---- 222 (317)
T ss_dssp -------HHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHH----
T ss_pred -------hcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHh----
Confidence 25799999999999997532 1122333333334445567788889999999999999999987
Q ss_pred CCCCCCCCCCC---CCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 016468 160 DIPGQKGRPIA---SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236 (389)
Q Consensus 160 ~~~~~~~~~~~---~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (389)
.+.. .|++||+++ +++|+.|+++.+.+.+|. .+....|.
T Consensus 223 -------~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~----------------------------- 264 (317)
T 3ajr_A 223 -------ADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKED----------------------------- 264 (317)
T ss_dssp -------CCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCC-----------------------------
T ss_pred -------CCccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccc-----------------------------
Confidence 2221 358999986 679999999999999873 12111111
Q ss_pred CCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 237 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.+.... ......+|++|++++|||+|+++++++++++++||+++..
T Consensus 265 --~~~~~~-~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~ 310 (317)
T 3ajr_A 265 --FRDKIA-ATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLG 310 (317)
T ss_dssp --HHHHHH-TTSCSCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred --cchhhc-cccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhc
Confidence 011111 1122368999999999999999999999999999988644
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=231.53 Aligned_cols=247 Identities=17% Similarity=0.184 Sum_probs=178.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+++..+++|+.++.|++++|.+.++ +|+||+||.. +||.....+.+|+.+..| .+.|+.||..+|++++.+
T Consensus 96 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~-v~g~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~ 170 (372)
T 1db3_A 96 ESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQEIPQKETTPFYP----RSPYAVAKLYAYWITVNY 170 (372)
T ss_dssp SCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCCSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChh-hhCCCCCCCCCccCCCCC----CChHHHHHHHHHHHHHHH
Confidence 45677889999999999999999998 8999999988 698877667889888766 689999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC-C----HHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~----~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.. +.+++++++|++++|||+... . +..++..+..|.. ...+|++++.++|+|++|+|++++.+++
T Consensus 171 ~~-------~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~-- 241 (372)
T 1db3_A 171 RE-------SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ-- 241 (372)
T ss_dssp HH-------HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTS--
T ss_pred HH-------HhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHh--
Confidence 52 257999999999999997642 2 3456666677763 4456899999999999999999999886
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccc--cCHH-HHHHHHHHHHHHHHHhhhccccc-cC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW--LAVP-HALFLGKVFSFFYSVLYPWLNRW-WL 233 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~--~p~~-~~~~~a~~~~~~~~~~~~~~~~~-~~ 233 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+.+... +|.+ ++..+. ..+ ....++... ..
T Consensus 242 ---------~~~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~-~~~----~~~~~~~~~~~~ 305 (372)
T 1db3_A 242 ---------QEQ--PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVT-GHD----APGVKPGDVIIA 305 (372)
T ss_dssp ---------SSS--CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEEC-SSS----CTTCCTTCEEEE
T ss_pred ---------cCC--CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccc-ccc----ccccccccceee
Confidence 222 478999999999999999999999997543211 1110 000000 000 000000000 00
Q ss_pred CCCC-CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccCC
Q 016468 234 PQPL-ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRKS 287 (389)
Q Consensus 234 ~~~~-~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~~ 287 (389)
..|. ..+.+ .....+|++|++++|||+|+++++++|+++++||+++....
T Consensus 306 ~~~~~~~~~~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~ 356 (372)
T 1db3_A 306 VDPRYFRPAE----VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKH 356 (372)
T ss_dssp ECGGGCCCCC-----CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccCCCc----hhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhcc
Confidence 0000 00100 11246799999999999999999999999999999866543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=217.89 Aligned_cols=200 Identities=22% Similarity=0.196 Sum_probs=160.9
Q ss_pred HHHHHHHHHHH--cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCc
Q 016468 19 GTCHVIEACLE--FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCL 96 (389)
Q Consensus 19 gt~nll~aa~~--~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl 96 (389)
.+.+++++|++ .+++||||+||.+ +||.....+.+|+++..| .+.|+.||..+|++++++ .++
T Consensus 80 ~~~~l~~a~~~~~~~~~~~v~~Ss~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~----------~~~ 144 (286)
T 3ius_A 80 VLAALGDQIAARAAQFRWVGYLSTTA-VYGDHDGAWVDETTPLTP----TAARGRWRVMAEQQWQAV----------PNL 144 (286)
T ss_dssp HHHHHHHHHHHTGGGCSEEEEEEEGG-GGCCCTTCEECTTSCCCC----CSHHHHHHHHHHHHHHHS----------TTC
T ss_pred HHHHHHHHHHhhcCCceEEEEeecce-ecCCCCCCCcCCCCCCCC----CCHHHHHHHHHHHHHHhh----------cCC
Confidence 47899999999 7899999999998 799887777899998877 689999999999999987 259
Q ss_pred eEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEE
Q 016468 97 YTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYF 176 (389)
Q Consensus 97 ~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~ 176 (389)
+++++||+.||||++.. +..+..|....+.++ ++.++|+|++|+|++++.+++ .+. .|++||
T Consensus 145 ~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~-----------~~~-~g~~~~ 206 (286)
T 3ius_A 145 PLHVFRLAGIYGPGRGP-----FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMA-----------RPD-PGAVYN 206 (286)
T ss_dssp CEEEEEECEEEBTTBSS-----STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHH-----------SCC-TTCEEE
T ss_pred CEEEEeccceECCCchH-----HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHh-----------CCC-CCCEEE
Confidence 99999999999998654 233455665555554 688999999999999999998 333 578999
Q ss_pred EeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHH
Q 016468 177 VSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLK 256 (389)
Q Consensus 177 i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 256 (389)
+++++++|+.|+++.+.+.+|.+.+. .+|.. .....+........+..+|++|
T Consensus 207 i~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~--------------------------~~~~~~~~~~~~~~~~~~d~~k 259 (286)
T 3ius_A 207 VCDDEPVPPQDVIAYAAELQGLPLPP-AVDFD--------------------------KADLTPMARSFYSENKRVRNDR 259 (286)
T ss_dssp ECCSCCBCHHHHHHHHHHHHTCCCCC-EEEGG--------------------------GSCCCHHHHHTTSCCCEECCHH
T ss_pred EeCCCCccHHHHHHHHHHHcCCCCCc-ccchh--------------------------hhccChhHHHhhcCCceeehHH
Confidence 99999999999999999999987553 22221 1112222222233556899999
Q ss_pred HHHhCCCCCCC-ChHHHHHHHHH
Q 016468 257 AKDELCYVPIV-SPREGMAATIS 278 (389)
Q Consensus 257 a~~~LG~~p~~-sl~~~l~~~v~ 278 (389)
++++|||+|++ +++++|+++++
T Consensus 260 ~~~~lG~~p~~p~~~e~l~~~~~ 282 (286)
T 3ius_A 260 IKEELGVRLKYPNYRVGLEALQA 282 (286)
T ss_dssp HHHTTCCCCSCSSHHHHHHHHHH
T ss_pred HHHHhCCCCCcCCHHHHHHHHHH
Confidence 99999999999 79999999876
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=225.15 Aligned_cols=245 Identities=17% Similarity=0.142 Sum_probs=180.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEE-------EecCCceecCCcc--cCCCCCCCCCCCCCCCCCcHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLV-------YVSTYNVVFGGKE--IVNGNESLPYFPIDEHVDSYGRSKSV 75 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV-------~~SS~~vvyg~~~--~~~~~E~~p~~p~~~~~~~Y~~SK~~ 75 (389)
.+++..+++|+.++.|++++|++. +++|+| |+||.+ +||... ..+.+|+++..| +.+.| ..
T Consensus 85 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~-vyg~~~~~~~~~~E~~~~~~---~~~~y----~~ 156 (364)
T 2v6g_A 85 STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFE-SYGKIESHDPPYTEDLPRLK---YMNFY----YD 156 (364)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGG-GTTTSCCCCSSBCTTSCCCS---SCCHH----HH
T ss_pred chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechh-hccccccCCCCCCccccCCc---cchhh----HH
Confidence 457789999999999999999998 899998 899988 698752 346788876544 14567 35
Q ss_pred HHHHHHHhCCCCCCCCCCCC-ceEEEEecCceecCCCCCC----HHH-HHHHH--HcCCCcceecCCC---ccccceeHH
Q 016468 76 AEQLVLKSNGRPFKKNNRKC-LYTCAVRPAAIYGPGEERH----LPR-IVSLA--KLGLVPFKIGEPS---VKTDWIYVD 144 (389)
Q Consensus 76 aE~~l~~~~~~~~~~~~~~g-l~~~ilRp~~IyGp~~~~~----~~~-li~~~--~~g~~~~~~g~~~---~~~~~v~vd 144 (389)
+|+++.++.. +.+ ++++++||+.||||++... .+. ++..+ ..|.+..++|+++ ...+++|++
T Consensus 157 ~E~~~~~~~~-------~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~ 229 (364)
T 2v6g_A 157 LEDIMLEEVE-------KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDAD 229 (364)
T ss_dssp HHHHHHHHHT-------TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHH
T ss_pred HHHHHHHHhh-------cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHH
Confidence 8999988763 245 9999999999999987532 223 44555 4677666678874 457889999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCcc--ccCHHHHHHHHHHHHHHHH
Q 016468 145 NLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYS 222 (389)
Q Consensus 145 Dla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~--~~p~~~~~~~a~~~~~~~~ 222 (389)
|+|++++.+++ .+...|++||+++++++|+.|+++.+.+.+|.+.+.. .+|.+++..++...+.+..
T Consensus 230 Dva~a~~~~~~-----------~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~ 298 (364)
T 2v6g_A 230 LIAEHHIWAAV-----------DPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEE 298 (364)
T ss_dssp HHHHHHHHHHH-----------CGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHH
T ss_pred HHHHHHHHHHh-----------CCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHH
Confidence 99999999997 4444688999999999999999999999999886655 7888877766652222211
Q ss_pred HhhhccccccCCCCCCCHHHH-------HHhccc-cccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 223 VLYPWLNRWWLPQPLILPAEV-------YKVGVT-HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+... .. ..+. ..... ..+..+ ..+|++|+++ |||+|.++++++++++++||++++
T Consensus 299 ~~~~-~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 299 IVRE-NG----LTPT-KLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp HHHH-TT----CCCC-CHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHH-hC----CCcc-ccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcC
Confidence 1100 00 0010 00111 112245 5899999987 999998899999999999998754
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=223.06 Aligned_cols=240 Identities=19% Similarity=0.200 Sum_probs=178.4
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+++..+++|+.|+.|++++|.+.++ +|+||+||.. +||.....+.+|+.+..| .+.|+.||..+|++++.+.
T Consensus 92 ~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~-vyg~~~~~~~~e~~~~~~----~~~Y~~sK~~~e~~~~~~~ 166 (345)
T 2z1m_A 92 FEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSE-MFGKVQEIPQTEKTPFYP----RSPYAVAKLFGHWITVNYR 166 (345)
T ss_dssp TTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGG-GGCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechh-hcCCCCCCCCCccCCCCC----CChhHHHHHHHHHHHHHHH
Confidence 356788899999999999999999997 8999999998 699877777888887766 6899999999999999875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC-CH----HHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER-HL----PRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~----~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
. +.+++++++|+.++|||+... .+ ..++..+..|.. ...++++.+.++|+|++|+|++++.+++
T Consensus 167 ~-------~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~--- 236 (345)
T 2z1m_A 167 E-------AYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ--- 236 (345)
T ss_dssp H-------HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT---
T ss_pred H-------HhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh---
Confidence 2 247899999999999998642 22 334455556653 3356888899999999999999999986
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCcc--ccCHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS--WLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~--~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+.+.. .+|.+++. +. +...... ...+
T Consensus 237 --------~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~~--------~~~~~~~--~~~~ 294 (345)
T 2z1m_A 237 --------QPE--PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGID--RN--------TGKVIVE--VSEE 294 (345)
T ss_dssp --------SSS--CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--TT--------TCCEEEE--ECGG
T ss_pred --------CCC--CceEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccccc--cc--------ccccccc--cCcc
Confidence 222 46899999999999999999999999864322 12221100 00 0000000 0000
Q ss_pred CCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 237 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
...+.. .....+|++|++++|||+|+++++++++++++||+++.+.
T Consensus 295 ~~~~~~----~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 340 (345)
T 2z1m_A 295 FFRPAE----VDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVRD 340 (345)
T ss_dssp GSCSSC----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCC----cceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHhcc
Confidence 000000 1223679999999999999989999999999999986544
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=225.90 Aligned_cols=221 Identities=19% Similarity=0.204 Sum_probs=174.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC-----eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ-----RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk-----rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++..+++|+.|+.|++++|.+.+++ ||||+||.. +||.... +.+|+++..| .+.|+.||..+|++++
T Consensus 124 ~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~-vyg~~~~-~~~E~~~~~~----~~~Y~~sK~~~E~~~~ 197 (381)
T 1n7h_A 124 EIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGSTPP-PQSETTPFHP----RSPYAASKCAAHWYTV 197 (381)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTSCS-SBCTTSCCCC----CSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHH-HhCCCCC-CCCCCCCCCC----CCchHHHHHHHHHHHH
Confidence 456788999999999999999998876 999999998 6987766 7889888766 6899999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC-C----HHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-H----LPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~----~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.. +.+++++++|++++|||+... . +..++..+..|.. ...+|++++.++|+|++|+|++++.+++
T Consensus 198 ~~~~-------~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~ 270 (381)
T 1n7h_A 198 NYRE-------AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQ 270 (381)
T ss_dssp HHHH-------HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHT
T ss_pred HHHH-------HhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHh
Confidence 8752 247899999999999998653 2 2445555666653 3456888999999999999999999986
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC-ccccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~-~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
.+. +++||+++++++|+.|+++.+.+.+|.+.+ ...++.
T Consensus 271 -----------~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------------- 310 (381)
T 1n7h_A 271 -----------QEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--------------------------- 310 (381)
T ss_dssp -----------SSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG---------------------------
T ss_pred -----------CCC--CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCc---------------------------
Confidence 222 479999999999999999999999997532 111110
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
....+.+ .....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 311 -~~~~~~~----~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 356 (381)
T 1n7h_A 311 -RYFRPAE----VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAK 356 (381)
T ss_dssp -GGSCSSC----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred -ccCCccc----cccccCCHHHHHHhcCCcccCCHHHHHHHHHHHHHhhcc
Confidence 0000000 112367999999999999988999999999999987543
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-26 Score=241.24 Aligned_cols=236 Identities=15% Similarity=0.128 Sum_probs=183.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC---CCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY---FPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~---~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+++..+++|+.||.|++++|.+.+ +|+||+||.+ +||.....+.+|+++. .|...+.+.|+.||..+|++++.+
T Consensus 400 ~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~-vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~ 477 (660)
T 1z7e_A 400 RNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSE-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 477 (660)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGG-GGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHH-HcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHH
Confidence 4567789999999999999999999 8999999998 6988766677887753 222234678999999999999887
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC----------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE----------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~----------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
.. +.+++++++||+.||||+.. +.++.++..+..|....+++++++.++|+|++|+|++++.+
T Consensus 478 ~~-------~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~ 550 (660)
T 1z7e_A 478 GE-------KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 550 (660)
T ss_dssp HH-------HHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHH
T ss_pred HH-------HcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHH
Confidence 52 24799999999999999863 34677888888888777888889999999999999999999
Q ss_pred HhcccCCCCCCCCCCC--CCCceEEEeCCC-CCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccc
Q 016468 154 SMGLLDDIPGQKGRPI--ASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNR 230 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~--~~g~~y~i~~~~-~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 230 (389)
++ .+. ..|++||+++++ ++|+.|+++.+.+.+|.+.+...+|.+...
T Consensus 551 l~-----------~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~------------------- 600 (660)
T 1z7e_A 551 IE-----------NAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGF------------------- 600 (660)
T ss_dssp HH-----------CGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCE-------------------
T ss_pred Hh-----------CccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccc-------------------
Confidence 87 222 468899999986 899999999999999876444333321000
Q ss_pred ccCCCCCCCHHHHH---HhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 231 WWLPQPLILPAEVY---KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 231 ~~~~~~~~~~~~~~---~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
...-...... .......+|++|++++|||+|+++++++|+++++||+++..
T Consensus 601 ----~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 601 ----RVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp ----EEECTHHHHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred ----cchhccccccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 0000000000 00123478999999999999988999999999999988654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=217.77 Aligned_cols=219 Identities=14% Similarity=0.085 Sum_probs=163.7
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+++..+++|+.++.|++++|.+.++ |+||+||.. +|++ ...+.+|+++..| .+.|+.||..+|++++.+.
T Consensus 77 ~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~-v~~~-~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~- 148 (315)
T 2ydy_A 77 ENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDY-VFDG-TNPPYREEDIPAP----LNLYGKTKLDGEKAVLENN- 148 (315)
T ss_dssp -----------CHHHHHHHHHHHHHTC-EEEEEEEGG-GSCS-SSCSBCTTSCCCC----CSHHHHHHHHHHHHHHHHC-
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHH-HcCC-CCCCCCCCCCCCC----cCHHHHHHHHHHHHHHHhC-
Confidence 356778899999999999999999998 999999999 6887 4556788887766 6899999999999999884
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC---CCHHHHHHHHH-cCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAK-LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~---~~~~~li~~~~-~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
++++++||+.||||++. ..++.++..+. .+...... +++.++++|++|+|++++.+++...
T Consensus 149 ----------~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~--- 213 (315)
T 2ydy_A 149 ----------LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRM--- 213 (315)
T ss_dssp ----------TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHH---
T ss_pred ----------CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhc---
Confidence 56799999999999876 56667777777 77654443 4678899999999999999886210
Q ss_pred CCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC-ccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCH
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP-KSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~-~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (389)
.....+++||+++++++|+.|+++.+.+.+|.+.+ ..++|.. +.....
T Consensus 214 -----~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------------------------~~~~~~- 262 (315)
T 2ydy_A 214 -----LDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS-------------------------PVLGAQ- 262 (315)
T ss_dssp -----TCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSC-------------------------CCSSSC-
T ss_pred -----cccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccc-------------------------cccccC-
Confidence 01245789999999999999999999999998754 3233210 000000
Q ss_pred HHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 241 ~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
...+..+|++|++++ ||+|.++++++|+++++||+++.
T Consensus 263 -----~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~ 300 (315)
T 2ydy_A 263 -----RPRNAQLDCSKLETL-GIGQRTPFRIGIKESLWPFLIDK 300 (315)
T ss_dssp -----CCSBCCBCCHHHHHT-TCCCCCCHHHHHHHHHGGGCC--
T ss_pred -----CCcccccchHHHHhc-CCCCCCCHHHHHHHHHHHHccch
Confidence 012357899999998 99999999999999999997653
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.3e-26 Score=217.87 Aligned_cols=203 Identities=18% Similarity=0.197 Sum_probs=165.0
Q ss_pred hHhhhhHHHHHHHHHHHcCCCeEEEecCCceecC----CcccCCCCCCCCCCCCCCCC-CcHHHHHHHHHHHHHH-hCCC
Q 016468 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFG----GKEIVNGNESLPYFPIDEHV-DSYGRSKSVAEQLVLK-SNGR 86 (389)
Q Consensus 13 ~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg----~~~~~~~~E~~p~~p~~~~~-~~Y~~SK~~aE~~l~~-~~~~ 86 (389)
+++|+.++.|++++|.+.+++|+||+||.. +|| .... +.+|+. .| . +.|+.||..+|++++. +.
T Consensus 110 ~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~-~~g~~~~~~~~-~~~E~~--~p----~~~~Y~~sK~~~E~~~~~s~~-- 179 (333)
T 2q1w_A 110 TLTNCVGGSNVVQAAKKNNVGRFVYFQTAL-CYGVKPIQQPV-RLDHPR--NP----ANSSYAISKSANEDYLEYSGL-- 179 (333)
T ss_dssp HHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGCSCCCSSSB-CTTSCC--CC----TTCHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEECcHH-HhCCCcccCCC-CcCCCC--CC----CCCchHHHHHHHHHHHHhhhC--
Confidence 889999999999999999999999999988 687 4444 667765 33 5 8999999999999998 61
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
+++++||+.+|||+.. ..++.++..+..+. ..++ +++.++++|++|+|++++.+++
T Consensus 180 ----------~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~---------- 236 (333)
T 2q1w_A 180 ----------DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVD---------- 236 (333)
T ss_dssp ----------CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHT----------
T ss_pred ----------CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHh----------
Confidence 6899999999999843 45677888777776 4456 6788999999999999999986
Q ss_pred CCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHH
Q 016468 166 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 245 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (389)
.+. |++||+++++++++.|+++.+.+.+|.+ +...+|.+ ++. ...
T Consensus 237 -~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~-------------------------~~~------~~~ 281 (333)
T 2q1w_A 237 -GVG--HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIR-------------------------ELG------PDD 281 (333)
T ss_dssp -TCC--CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEE-------------------------ECC------TTS
T ss_pred -cCC--CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCC-------------------------Ccc------ccc
Confidence 333 8899999999999999999999999987 43333321 000 011
Q ss_pred hccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 246 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 246 ~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
...+..+|++|++++ ||+|+++++++|+++++||++++
T Consensus 282 ~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~~~~~~~~~ 319 (333)
T 2q1w_A 282 APSILLDPSRTIQDF-GKIEFTPLKETVAAAVAYFREYG 319 (333)
T ss_dssp CCCCCBCCHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ccccccCCHHHHHhc-CCCcCCCHHHHHHHHHHHHHHHC
Confidence 123457999999998 99999999999999999999865
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.6e-25 Score=208.31 Aligned_cols=217 Identities=13% Similarity=-0.022 Sum_probs=171.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCC--eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQ--RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvk--rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+.+.++|+.+|++|+++|.+.+++ ++|++||.+ +||.....+.+|++|..| .+.|+.+|...|......
T Consensus 74 ~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~-vyg~~~~~~~~E~~p~~~----~~~~~~~~~~~e~~~~~~-- 146 (298)
T 4b4o_A 74 FQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVA-YYQPSLTAEYDEDSPGGD----FDFFSNLVTKWEAAARLP-- 146 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGG-GSCCCSSCCBCTTCCCSC----SSHHHHHHHHHHHHHCCS--
T ss_pred hhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeee-eecCCCCCcccccCCccc----cchhHHHHHHHHHHHHhh--
Confidence 34678899999999999999998754 589999988 799988888999998776 688898888888764332
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
..+++++++||+.||||++ +.+..+......+.. ..+|++++.++|||++|+|++++.+++
T Consensus 147 -------~~~~~~~~~r~~~v~g~~~-~~~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~---------- 207 (298)
T 4b4o_A 147 -------GDSTRQVVVRSGVVLGRGG-GAMGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALE---------- 207 (298)
T ss_dssp -------SSSSEEEEEEECEEECTTS-HHHHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHH----------
T ss_pred -------ccCCceeeeeeeeEEcCCC-CchhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHh----------
Confidence 2689999999999999976 346677777777764 456999999999999999999999998
Q ss_pred CCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHH
Q 016468 166 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 245 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (389)
++.. +++||+++++++|+.|+++.+.+.+|.+. .+++|.++++++. .+. ....
T Consensus 208 -~~~~-~g~yn~~~~~~~t~~e~~~~ia~~lgrp~-~~pvP~~~~~~~~--g~~----------------------~~~~ 260 (298)
T 4b4o_A 208 -ANHV-HGVLNGVAPSSATNAEFAQTFGAALGRRA-FIPLPSAVVQAVF--GRQ----------------------RAIM 260 (298)
T ss_dssp -CTTC-CEEEEESCSCCCBHHHHHHHHHHHHTCCC-CCCBCHHHHHHHH--CHH----------------------HHHH
T ss_pred -CCCC-CCeEEEECCCccCHHHHHHHHHHHhCcCC-cccCCHHHHHHHh--cch----------------------hHHH
Confidence 4444 44999999999999999999999999764 4678887665431 110 1111
Q ss_pred hccccccchHHHHHhCCCCCCC-ChHHHHHHHHH
Q 016468 246 VGVTHYFSLLKAKDELCYVPIV-SPREGMAATIS 278 (389)
Q Consensus 246 ~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~ 278 (389)
+..+...+++|++ ++||++++ +++++|++.++
T Consensus 261 ~l~~~rv~~~kl~-~~Gf~f~yp~l~~al~~l~~ 293 (298)
T 4b4o_A 261 LLEGQKVIPRRTL-ATGYQYSFPELGAALKEIAE 293 (298)
T ss_dssp HHCCCCBCCHHHH-HTTCCCSCCSHHHHHHHHHH
T ss_pred hhCCCEEcHHHHH-HCCCCCCCCCHHHHHHHHHH
Confidence 1223357788987 58999998 69999998877
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.9e-26 Score=217.61 Aligned_cols=219 Identities=20% Similarity=0.174 Sum_probs=171.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++..+++|+.||.|++++|++.+ ++|+||+||.. +|+.....+.+|+++..| .+.|+.||..+|++++
T Consensus 103 ~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~-~~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~ 177 (342)
T 2hrz_A 103 LDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIA-VFGAPLPYPIPDEFHTTP----LTSYGTQKAICELLLS 177 (342)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GCCSSCCSSBCTTCCCCC----SSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchH-hhCCCCCCCcCCCCCCCC----cchHHHHHHHHHHHHH
Confidence 4567789999999999999999887 89999999998 698765567889888766 6899999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceec-CCCC-----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYG-PGEE-----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyG-p~~~-----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
++.. ..+++.+++|++.||| |+.. ..+..++..+..|....++++++...+++|++|+|++++.+++
T Consensus 178 ~~~~-------~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~ 250 (342)
T 2hrz_A 178 DYSR-------RGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAM 250 (342)
T ss_dssp HHHH-------TTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHH
T ss_pred HHHH-------hcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHh
Confidence 8862 2579999999999999 7653 2356677777888766666677777889999999999999987
Q ss_pred cccCCCCCCCCCCC---CCCceEEEeCCCCCChHHHHHHHHHhCCCCCC--ccccCHHHHHHHHHHHHHHHHHhhhcccc
Q 016468 156 GLLDDIPGQKGRPI---ASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP--KSWLAVPHALFLGKVFSFFYSVLYPWLNR 230 (389)
Q Consensus 156 ~l~~~~~~~~~~~~---~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~--~~~~p~~~~~~~a~~~~~~~~~~~~~~~~ 230 (389)
.+. ..+++||++ ++++|+.|+++.+.+.+|.+.+ ....|...
T Consensus 251 -----------~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------------------- 297 (342)
T 2hrz_A 251 -----------IDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEM--------------------- 297 (342)
T ss_dssp -----------SCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHH---------------------
T ss_pred -----------ccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcc---------------------
Confidence 222 146799995 5789999999999999986531 11122110
Q ss_pred ccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 231 WWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
..+.. ......+|++|+++ |||+|+++++++|+++++||+
T Consensus 298 ---------~~~~~-~~~~~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 298 ---------IMRMC-EGWAPGFEAKRARE-LGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp ---------HHHHH-TTSCCCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred ---------hhhhh-cccccccChHHHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence 00110 01122589999998 999999899999999999997
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=216.22 Aligned_cols=202 Identities=18% Similarity=0.226 Sum_probs=165.0
Q ss_pred hHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccC--CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Q 016468 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIV--NGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKK 90 (389)
Q Consensus 13 ~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~--~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~ 90 (389)
+++|+.++.|++++|.+.+++|+||+||.. +|+..... +.+|+. .| .+.|+.||..+|++++.+
T Consensus 109 ~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~-~~~~~~~~~~~~~E~~--~~----~~~Y~~sK~~~e~~~~~~------- 174 (330)
T 2pzm_A 109 AATNVQGSINVAKAASKAGVKRLLNFQTAL-CYGRPATVPIPIDSPT--AP----FTSYGISKTAGEAFLMMS------- 174 (330)
T ss_dssp HHHHTHHHHHHHHHHHHHTCSEEEEEEEGG-GGCSCSSSSBCTTCCC--CC----CSHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCHH-HhCCCccCCCCcCCCC--CC----CChHHHHHHHHHHHHHHc-------
Confidence 799999999999999999999999999998 68875443 667766 33 689999999999999876
Q ss_pred CCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHH-HHHHHHhcccCCCCCCCCCC
Q 016468 91 NNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVL-ALILASMGLLDDIPGQKGRP 168 (389)
Q Consensus 91 ~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~-a~~~a~~~l~~~~~~~~~~~ 168 (389)
+++++++||+++|||+.. ..++.++..+..+. ..++++. .++++|++|+|+ +++.+++ .+
T Consensus 175 ----~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~-----------~~ 236 (330)
T 2pzm_A 175 ----DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQE-----------GR 236 (330)
T ss_dssp ----SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTST-----------TC
T ss_pred ----CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhh-----------cC
Confidence 388999999999999874 44567777777776 4556777 889999999999 9998886 33
Q ss_pred CCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhcc
Q 016468 169 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGV 248 (389)
Q Consensus 169 ~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (389)
. |++||+++++++++.|+++.+.+.+|.+ +....|.+ + ...
T Consensus 237 ~--g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~-------------------------~-----------~~~ 277 (330)
T 2pzm_A 237 P--TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVV-------------------------A-----------PGA 277 (330)
T ss_dssp C--CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEE-------------------------C-----------CCT
T ss_pred C--CCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCC-------------------------c-----------chh
Confidence 2 8899999999999999999999999987 44333321 0 012
Q ss_pred ccccchHHH-----HHhCCCCCCCChHHHHHHHHHHHHHcccC
Q 016468 249 THYFSLLKA-----KDELCYVPIVSPREGMAATISYWQDRKRK 286 (389)
Q Consensus 249 ~~~~d~~ka-----~~~LG~~p~~sl~~~l~~~v~~~~~~~~~ 286 (389)
...+|++|+ ++ |||+|+++++++|+++++||++.+..
T Consensus 278 ~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 278 DDVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp TSCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred hccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 346788888 77 99999889999999999999986543
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=237.08 Aligned_cols=228 Identities=18% Similarity=0.176 Sum_probs=169.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc----CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI----VNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~----~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+++..+++|+.++.|++++|++.+++|+||+||.+ +||.... .+.+|+.+..| .+.|+.||..+|++++++
T Consensus 103 ~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~-vyg~~~~~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~ 177 (699)
T 1z45_A 103 IPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSAT-VYGDATRFPNMIPIPEECPLGP----TNPYGHTKYAIENILNDL 177 (699)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCCGGGSTTCCSBCTTSCCCC----CSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHH-HhCCCccccccCCccccCCCCC----CChHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999988 6886532 35677777666 689999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC------------CCHHHHHHHHHc-CCCcceec------CCCccccceeHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAKL-GLVPFKIG------EPSVKTDWIYVD 144 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~~~li~~~~~-g~~~~~~g------~~~~~~~~v~vd 144 (389)
... ...+++++++||+.||||+.. ..++.+...+.. +..+.++| ++++.++|||++
T Consensus 178 ~~~-----~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 252 (699)
T 1z45_A 178 YNS-----DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVV 252 (699)
T ss_dssp HHH-----STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHH
T ss_pred HHh-----ccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHH
Confidence 421 015799999999999998532 123434433332 23455566 678899999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHh
Q 016468 145 NLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVL 224 (389)
Q Consensus 145 Dla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~ 224 (389)
|+|++++.+++..... ......+++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 253 Dva~a~~~a~~~~~~~-----~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~---------------- 311 (699)
T 1z45_A 253 DLAKGHIAALQYLEAY-----NENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR---------------- 311 (699)
T ss_dssp HHHHHHHHHHHHHHHS-----CTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------------------
T ss_pred HHHHHHHHHHhhhhcc-----ccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCC----------------
Confidence 9999999998632100 0012235799999999999999999999999987553221110
Q ss_pred hhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 225 YPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
..+ .....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 312 ---------------~~~----~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~ 353 (699)
T 1z45_A 312 ---------------AGD----VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF 353 (699)
T ss_dssp ----------------------CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred ---------------CCc----cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 000 123478999999999999999999999999999987543
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=200.22 Aligned_cols=217 Identities=17% Similarity=0.121 Sum_probs=150.8
Q ss_pred hhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcc-cCCCCCCCCCCCC----CCCCC-cHHHHHHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPI----DEHVD-SYGRSKSVAEQLVLK 82 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~-~~~~~E~~p~~p~----~~~~~-~Y~~SK~~aE~~l~~ 82 (389)
+.++++|+.||.|++++|.+. +++|+||+||..++|+... ..+.+|+.+..+. ..+.+ .|+.||..+|+++.+
T Consensus 94 ~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~ 173 (322)
T 2p4h_X 94 EIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLE 173 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHH
Confidence 458899999999999999998 8999999999986555322 2234665432100 01122 699999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHH---HHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSL---AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~---~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.. ..|++++++||+.||||+.....+..+.. ...|.... +++ ...+|+|++|+|++++.+++
T Consensus 174 ~~~-------~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~i~v~Dva~a~~~~~~---- 239 (322)
T 2p4h_X 174 FGE-------QNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQ-IGV--TRFHMVHVDDVARAHIYLLE---- 239 (322)
T ss_dssp HHH-------HTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGG-CCE--EEEEEEEHHHHHHHHHHHHH----
T ss_pred HHH-------hcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCcc-CcC--CCcCEEEHHHHHHHHHHHhh----
Confidence 752 25899999999999999865332222221 23444322 232 33489999999999999987
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
.+...|+ || ++++++|+.|+++.+.+.++. ..+|... . ..+ ..
T Consensus 240 -------~~~~~g~-~~-~~~~~~s~~e~~~~i~~~~~~----~~~~~~~-------------~----------~~~-~~ 282 (322)
T 2p4h_X 240 -------NSVPGGR-YN-CSPFIVPIEEMSQLLSAKYPE----YQILTVD-------------E----------LKE-IK 282 (322)
T ss_dssp -------SCCCCEE-EE-CCCEEEEHHHHHHHHHHHCTT----SCCCCTT-------------T----------TTT-CC
T ss_pred -------CcCCCCC-EE-EcCCCCCHHHHHHHHHHhCCC----CCCCCCc-------------c----------ccC-CC
Confidence 3334454 88 667889999999999887742 1122110 0 000 00
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
. .....+|++|+ ++|||+|+++++++|+++++|+++++
T Consensus 283 ~------~~~~~~d~~k~-~~lG~~p~~~~~~~l~~~~~~~~~~~ 320 (322)
T 2p4h_X 283 G------ARLPDLNTKKL-VDAGFDFKYTIEDMFDDAIQCCKEKG 320 (322)
T ss_dssp C------EECCEECCHHH-HHTTCCCCCCHHHHHHHHHHHHHHHT
T ss_pred C------CcceecccHHH-HHhCCccCCCHHHHHHHHHHHHHhcC
Confidence 0 12357899999 66999999999999999999998753
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-24 Score=217.67 Aligned_cols=221 Identities=13% Similarity=0.024 Sum_probs=159.3
Q ss_pred CcchhhhHhhhhHHHHHHHH-HHHcCCCeEEEecCCceecC-CcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEA-CLEFGIQRLVYVSTYNVVFG-GKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~a-a~~~gvkrlV~~SS~~vvyg-~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+++.++++|+.||.||+++ |++.++++|||+||.+ +|| .....+.+|+.+. | .+.|+.+|..+|+++....
T Consensus 220 ~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~-vyg~~~~~~~~~E~~~~-~----~~~y~~~~~~~E~~~~~~~ 293 (516)
T 3oh8_A 220 SHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVG-FYGHDRGDEILTEESES-G----DDFLAEVCRDWEHATAPAS 293 (516)
T ss_dssp GGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGG-GGCSEEEEEEECTTSCC-C----SSHHHHHHHHHHHTTHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcce-EecCCCCCCccCCCCCC-C----cChHHHHHHHHHHHHHHHH
Confidence 45677899999999999999 6667899999999999 798 5555677888876 3 5899999999998877653
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
..|++++++||+.||||+. +.++.++..+..|.. ..+|++++.++|+|++|+|++++.+++
T Consensus 294 --------~~gi~~~ilRp~~v~Gp~~-~~~~~~~~~~~~g~~-~~~g~g~~~~~~i~v~Dva~ai~~~l~--------- 354 (516)
T 3oh8_A 294 --------DAGKRVAFIRTGVALSGRG-GMLPLLKTLFSTGLG-GKFGDGTSWFSWIAIDDLTDIYYRAIV--------- 354 (516)
T ss_dssp --------HTTCEEEEEEECEEEBTTB-SHHHHHHHTTC---C-CCCTTSCCEECEEEHHHHHHHHHHHHH---------
T ss_pred --------hCCCCEEEEEeeEEECCCC-ChHHHHHHHHHhCCC-cccCCCCceEceEeHHHHHHHHHHHHh---------
Confidence 2689999999999999985 456666666666654 367899999999999999999999997
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (389)
.+. .+++||+++++++|+.|+++.+.+.+|.+. ...+|.+...... .+.. ...
T Consensus 355 --~~~-~~g~~ni~~~~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~~-------------------g~~~----~~~ 407 (516)
T 3oh8_A 355 --DAQ-ISGPINAVAPNPVSNADMTKILATSMHRPA-FIQIPSLGPKILL-------------------GSQG----AEE 407 (516)
T ss_dssp --CTT-CCEEEEESCSCCEEHHHHHHHTTC-----------------------------------------CC----GGG
T ss_pred --Ccc-cCCcEEEECCCCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHHh-------------------CCch----hHH
Confidence 333 345899999999999999999999999764 4445544322100 0000 011
Q ss_pred HhccccccchHHHHHhCCCCCCCC-hHHHHHHHHHHH
Q 016468 245 KVGVTHYFSLLKAKDELCYVPIVS-PREGMAATISYW 280 (389)
Q Consensus 245 ~~~~~~~~d~~ka~~~LG~~p~~s-l~~~l~~~v~~~ 280 (389)
....+...+++|++ +|||+|+++ ++++|+++++..
T Consensus 408 ~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 408 LALASQRTAPAALE-NLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp GGGCEEEECCHHHH-HTTCCCSCSSHHHHHHHHHTCC
T ss_pred HhhcCCeechHHHH-HCCCCCCCCCHHHHHHHHhCcc
Confidence 12234467889998 699999986 999999998743
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-24 Score=207.53 Aligned_cols=217 Identities=17% Similarity=0.107 Sum_probs=148.1
Q ss_pred hhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCccc---CCCCCCCCCC-----CCCCCCCcHHHHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEI---VNGNESLPYF-----PIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~---~~~~E~~p~~-----p~~~~~~~Y~~SK~~aE~~l 80 (389)
+.++++|+.||.|++++|++.+ ++||||+||.+++|+.... .+.+|+.+.. |.......|+.||..+|+++
T Consensus 100 ~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 179 (338)
T 2rh8_A 100 NDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAA 179 (338)
T ss_dssp ---CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHH
Confidence 3488999999999999999996 9999999998866653221 2567765322 11011236999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHH---HHcCCCcceecCC------CccccceeHHHHHHHHH
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSL---AKLGLVPFKIGEP------SVKTDWIYVDNLVLALI 151 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~---~~~g~~~~~~g~~------~~~~~~v~vdDla~a~~ 151 (389)
+++.. ..|++++++||++||||+.....+..+.. ...|... .+++. ...++|+|++|+|++++
T Consensus 180 ~~~~~-------~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 251 (338)
T 2rh8_A 180 WKFAE-------ENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHI 251 (338)
T ss_dssp HHHHH-------HHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHH
T ss_pred HHHHH-------HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHH
Confidence 88752 24799999999999999875433332222 2344322 12211 12348999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
.+++ .+.. ++.|++++ ..+|+.|+++.+.+.++.. .+|.. +.
T Consensus 252 ~~~~-----------~~~~-~~~~~~~~-~~~s~~e~~~~l~~~~~~~----~~~~~-------------------~~-- 293 (338)
T 2rh8_A 252 FVAE-----------KESA-SGRYICCA-ANTSVPELAKFLSKRYPQY----KVPTD-------------------FG-- 293 (338)
T ss_dssp HHHH-----------CTTC-CEEEEECS-EEECHHHHHHHHHHHCTTS----CCCCC-------------------CT--
T ss_pred HHHc-----------CCCc-CCcEEEec-CCCCHHHHHHHHHHhCCCC----CCCCC-------------------CC--
Confidence 9987 3222 34687765 4689999999999887521 11110 00
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
..+. .....+|++|+ ++|||+|+++++++|+++++||++.+
T Consensus 294 --~~~~---------~~~~~~d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~ 334 (338)
T 2rh8_A 294 --DFPP---------KSKLIISSEKL-VKEGFSFKYGIEEIYDESVEYFKAKG 334 (338)
T ss_dssp --TSCS---------SCSCCCCCHHH-HHHTCCCSCCHHHHHHHHHHHHHHTT
T ss_pred --CCCc---------CcceeechHHH-HHhCCCCCCCHHHHHHHHHHHHHHcC
Confidence 0000 01147899999 66999999999999999999998753
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=201.21 Aligned_cols=217 Identities=18% Similarity=0.120 Sum_probs=149.9
Q ss_pred hhhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcc-cCCCCCCCCCCC-----CCCCCCcHHHHHHHHHHHHHH
Q 016468 10 GRVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKE-IVNGNESLPYFP-----IDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 10 ~~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~-~~~~~E~~p~~p-----~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.++++|+.||.|++++|++.+ ++|+||+||..++|+... ..+.+|+.+..+ ...+.+.|+.||..+|+++++
T Consensus 97 ~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 176 (337)
T 2c29_D 97 NEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWK 176 (337)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHH
Confidence 3588999999999999999988 999999999986666432 223566643210 001245799999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHH---HcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLA---KLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~---~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.. +.|++++++||++||||+....++..+... ..|... .++.+. ...|+|++|+|++++.+++
T Consensus 177 ~~~-------~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~i~v~Dva~a~~~~~~---- 243 (337)
T 2c29_D 177 YAK-------ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSIIR-QGQFVHLDDLCNAHIYLFE---- 243 (337)
T ss_dssp HHH-------HHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHHT-EEEEEEHHHHHHHHHHHHH----
T ss_pred HHH-------HcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-cccccC-CCCEEEHHHHHHHHHHHhc----
Confidence 742 257999999999999998654333322222 334322 222222 2459999999999999987
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
.+.. +..|++++ ..+|+.|+++.+.+.++.. .+|.. +...+
T Consensus 244 -------~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~----~~~~~-----------------------~~~~~--- 284 (337)
T 2c29_D 244 -------NPKA-EGRYICSS-HDCIILDLAKMLREKYPEY----NIPTE-----------------------FKGVD--- 284 (337)
T ss_dssp -------CTTC-CEEEEECC-EEEEHHHHHHHHHHHCTTS----CCCSC-----------------------CTTCC---
T ss_pred -------Cccc-CceEEEeC-CCCCHHHHHHHHHHHCCCc----cCCCC-----------------------CCccc---
Confidence 3323 34675554 5689999999999987421 11210 00000
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
.......+|++|+ ++|||+|+++++++++++++|+++.+
T Consensus 285 -----~~~~~~~~d~~k~-~~lG~~p~~~l~e~l~~~~~~~~~~~ 323 (337)
T 2c29_D 285 -----ENLKSVCFSSKKL-TDLGFEFKYSLEDMFTGAVDTCRAKG 323 (337)
T ss_dssp -----TTCCCCEECCHHH-HHHTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred -----CCCccccccHHHH-HHcCCCcCCCHHHHHHHHHHHHHHcC
Confidence 0012346899999 78999999999999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.90 E-value=9.8e-24 Score=202.67 Aligned_cols=218 Identities=14% Similarity=-0.004 Sum_probs=161.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHH-cCCCeEEEecCCceecCCc-cc---CCCCCCCCC------------CCCCCCCCcHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE-FGIQRLVYVSTYNVVFGGK-EI---VNGNESLPY------------FPIDEHVDSYG 70 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~-~gvkrlV~~SS~~vvyg~~-~~---~~~~E~~p~------------~p~~~~~~~Y~ 70 (389)
+++..+++|+.|+.|++++|.+ .+++|+||+||..+ |+.. +. .+.+|++.. .+...+.+.|+
T Consensus 99 ~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~-~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 177 (342)
T 1y1p_A 99 KYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVS-ALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYA 177 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGG-TCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHH-hcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHH
Confidence 5678899999999999999995 68999999999984 6432 21 345666521 00012357899
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCC-----CHHHHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 71 ~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
.||..+|++++.+... ...+++++++||+.||||.... .++.++..+..|....+++++ +.++|+|++|
T Consensus 178 ~sK~~~e~~~~~~~~~-----~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~D 251 (342)
T 1y1p_A 178 ASKTEAELAAWKFMDE-----NKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PPQYYVSAVD 251 (342)
T ss_dssp HHHHHHHHHHHHHHHH-----HCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHH
T ss_pred HHHHHHHHHHHHHHHh-----cCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-CcCCEeEHHH
Confidence 9999999999987521 0137899999999999997642 567888888888877666665 6789999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLY 225 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~ 225 (389)
+|++++.+++ .+...|+.+ +++++++|+.|+++.+.+.+|.. + +..+.
T Consensus 252 va~a~~~~~~-----------~~~~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~-~-~~~~~------------------ 299 (342)
T 1y1p_A 252 IGLLHLGCLV-----------LPQIERRRV-YGTAGTFDWNTVLATFRKLYPSK-T-FPADF------------------ 299 (342)
T ss_dssp HHHHHHHHHH-----------CTTCCSCEE-EECCEEECHHHHHHHHHHHCTTS-C-CCCCC------------------
T ss_pred HHHHHHHHHc-----------CcccCCceE-EEeCCCCCHHHHHHHHHHHCCCc-c-CCCCC------------------
Confidence 9999999987 333456555 56677899999999999999864 1 11110
Q ss_pred hccccccCCCCCCCHHHHHHhccccccchHHHHHhCCC---CCCCChHHHHHHHHHHHH
Q 016468 226 PWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCY---VPIVSPREGMAATISYWQ 281 (389)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~---~p~~sl~~~l~~~v~~~~ 281 (389)
+.. ......+|++|++++||| .+..+++++|+++++||+
T Consensus 300 --------~~~---------~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 300 --------PDQ---------GQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp --------CCC---------CCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred --------Ccc---------ccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 000 001246799999999887 566699999999999874
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=200.51 Aligned_cols=234 Identities=16% Similarity=0.064 Sum_probs=169.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCc-----ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGK-----EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~-----~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++..+++|+.|+.|++++|.+ ++++|||+||..+ |.. ...+.+|+++..+. .+.+.|+.||+.+|++++
T Consensus 165 ~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~--G~~~~~~~~~~~~~E~~~~~~~-~~~~~Y~~sK~~~E~~~~ 240 (427)
T 4f6c_A 165 GDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV--GTYFDIDTEDVTFSEADVYKGQ-LLTSPYTRSKFYSELKVL 240 (427)
T ss_dssp ----CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG--GSEECSSCSCCEECTTCSCSSC-CCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh--CCCccCCCCCccccccccccCC-CCCCchHHHHHHHHHHHH
Confidence 46778899999999999999999 8899999999984 332 23456777764332 247999999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC---------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
++.. .|++++++||+.||||+.... ++.++..+..+...+. +++++.++|+|++|+|++++.
T Consensus 241 ~~~~--------~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~DvA~ai~~ 311 (427)
T 4f6c_A 241 EAVN--------NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVA 311 (427)
T ss_dssp HHHH--------TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHHHHHHHHHH
T ss_pred HHHH--------cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHHHHHHHHHH
Confidence 9752 579999999999999987643 6778887777764433 456888999999999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW 232 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~ 232 (389)
++. .+. .|++||+++++++++.|+++.+.+ +| .+.++.+.|...+...-...+..+.
T Consensus 312 ~~~-----------~~~-~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~-------- 368 (427)
T 4f6c_A 312 LAQ-----------VNT-PQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLT-------- 368 (427)
T ss_dssp HTT-----------SCC-CCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHH--------
T ss_pred HHc-----------CCC-CCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhh--------
Confidence 986 334 789999999999999999999998 66 3344444443333221000010000
Q ss_pred CCCCCCCHHHHHHhccccccchHHHH---HhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 233 LPQPLILPAEVYKVGVTHYFSLLKAK---DELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~~ka~---~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
..........+|+++.. +++|+++....++.+++.++|+++...
T Consensus 369 ---------~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~ 415 (427)
T 4f6c_A 369 ---------SVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFN 415 (427)
T ss_dssp ---------HHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ---------hccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 00112234567887777 567998875556789999999987643
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.4e-22 Score=201.81 Aligned_cols=234 Identities=16% Similarity=0.063 Sum_probs=167.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCc-----ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGK-----EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~-----~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+++.+.++|+.||.|++++|.+ +++++||+||.+ + |.. ...+.+|+++..+ ..+.+.|++||+.+|+++.
T Consensus 246 ~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~-v-G~~~~~~~~~~~~~E~~~~~~-~~~~~~Y~~sK~~~E~~~~ 321 (508)
T 4f6l_B 246 GDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTIS-V-GTYFDIDTEDVTFSEADVYKG-QLLTSPYTRSKFYSELKVL 321 (508)
T ss_dssp ----CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESC-T-TSEECTTCSCCEECTTCSCSS-BCCCSHHHHHHHHHHHHHH
T ss_pred CCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChh-h-ccCCccCCcCccccccccccc-ccCCCcHHHHHHHHHHHHH
Confidence 46678899999999999999999 788999999998 4 331 2335677776432 1247999999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC---------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
++.. .|++++++||+.|||++.... ++.++..+..+...+. +++++.++|+|++|+|++++.
T Consensus 322 ~~~~--------~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~DvA~ai~~ 392 (508)
T 4f6l_B 322 EAVN--------NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDTTARQIVA 392 (508)
T ss_dssp HHHH--------TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHHHHHHHHH
T ss_pred HHHH--------cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHHHHHHHHH
Confidence 9852 589999999999999977643 6677777776664432 456889999999999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW 232 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~ 232 (389)
++. .+. .+++||+++++++++.|+++.+.+.. .+.++.+.|...+...-...+....
T Consensus 393 ~~~-----------~~~-~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~-------- 449 (508)
T 4f6l_B 393 LAQ-----------VNT-PQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLT-------- 449 (508)
T ss_dssp HTT-----------BCC-SCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHH--------
T ss_pred HHh-----------CCC-CCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcc--------
Confidence 986 333 78899999999999999999998865 3344444444333221000000000
Q ss_pred CCCCCCCHHHHHHhccccccchHHHH---HhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 233 LPQPLILPAEVYKVGVTHYFSLLKAK---DELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~~ka~---~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
..........+|+++.. +++|+.+....++.+++.++|+++...
T Consensus 450 ---------~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~~ 496 (508)
T 4f6l_B 450 ---------SVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFN 496 (508)
T ss_dssp ---------HTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred ---------cccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 00112234567877766 457998886668889999999887543
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.87 E-value=6e-22 Score=184.46 Aligned_cols=197 Identities=17% Similarity=0.128 Sum_probs=152.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.+++++|++.++ |+|++||.. +|++... +.+|+++..| .+.|+.||..+|++++.
T Consensus 75 ~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~-~~~~~~~-~~~e~~~~~~----~~~Y~~sK~~~e~~~~~---- 143 (273)
T 2ggs_A 75 IEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDY-VFDGEKG-NYKEEDIPNP----INYYGLSKLLGETFALQ---- 143 (273)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGG-GSCSSSC-SBCTTSCCCC----SSHHHHHHHHHHHHHCC----
T ss_pred hCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecce-eEcCCCC-CcCCCCCCCC----CCHHHHHHHHHHHHHhC----
Confidence 46778899999999999999999987 999999998 5876543 6788887666 68999999999999854
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
++++++||+.||| .......++..+..+......++ ..+++|++|+|++++.+++
T Consensus 144 ---------~~~~~iR~~~v~G--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~----------- 198 (273)
T 2ggs_A 144 ---------DDSLIIRTSGIFR--NKGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLE----------- 198 (273)
T ss_dssp ---------TTCEEEEECCCBS--SSSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHH-----------
T ss_pred ---------CCeEEEecccccc--ccHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHh-----------
Confidence 4569999999998 33445566677777776665554 7899999999999999987
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHh
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (389)
.+. +++||+++ +++|+.|+++.+.+.+|.+.+... |.+ .. .+.+. .
T Consensus 199 ~~~--~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~-~~~-------------------~~-~~~~~----------~ 244 (273)
T 2ggs_A 199 LRK--TGIIHVAG-ERISRFELALKIKEKFNLPGEVKE-VDE-------------------VR-GWIAK----------R 244 (273)
T ss_dssp HTC--CEEEECCC-CCEEHHHHHHHHHHHTTCCSCEEE-ESS-------------------CT-TCCSC----------C
T ss_pred cCc--CCeEEECC-CcccHHHHHHHHHHHhCCChhhcc-ccc-------------------cc-ccccC----------C
Confidence 222 45999999 999999999999999998765321 110 00 00000 0
Q ss_pred ccccccchHHHHHhCCCCC-CCChHHHH
Q 016468 247 GVTHYFSLLKAKDELCYVP-IVSPREGM 273 (389)
Q Consensus 247 ~~~~~~d~~ka~~~LG~~p-~~sl~~~l 273 (389)
..+..+|++|++++|||+| .+++++++
T Consensus 245 ~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 245 PYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp CSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred CcccccCHHHHHHHhCCCCCCccccccc
Confidence 1245799999999999999 56888765
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-22 Score=199.05 Aligned_cols=194 Identities=20% Similarity=0.179 Sum_probs=146.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCC-------CCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPI-------DEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~-------~~~~~~Y~~SK~~aE~~ 79 (389)
.+++..+++|+.||.|++++|.+.+++||||+||.+ +|+.....+.+|+.+..|. ....+.|+.||+.+|++
T Consensus 181 ~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~-v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~ 259 (478)
T 4dqv_A 181 FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTAD-VGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVL 259 (478)
T ss_dssp SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGG-GGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehh-hcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHH
Confidence 456678999999999999999999999999999998 6988777777887764431 11225599999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCC-------CCHHHHHHHHHc-CCC-cceec---C---CCccccceeHH
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------RHLPRIVSLAKL-GLV-PFKIG---E---PSVKTDWIYVD 144 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------~~~~~li~~~~~-g~~-~~~~g---~---~~~~~~~v~vd 144 (389)
++++.. +.|++++++||++|||++.. ..+.+++..... |.. ...++ + +++.++|+|++
T Consensus 260 ~~~~~~-------~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vd 332 (478)
T 4dqv_A 260 LREAND-------LCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVT 332 (478)
T ss_dssp HHHHHH-------HHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHH
T ss_pred HHHHHH-------HhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHH
Confidence 999852 24799999999999998651 234555554433 431 11121 1 26789999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCC--CChHHHHHHHHHhCCCCCCcc-ccCHHHHHHHHHH
Q 016468 145 NLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP--INTFEFIGPLLKTLDYDLPKS-WLAVPHALFLGKV 216 (389)
Q Consensus 145 Dla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~--~s~~e~~~~l~~~lg~~~~~~-~~p~~~~~~~a~~ 216 (389)
|+|++++.++..... .+...+++||++++++ +|+.|+++.+.+. |++.+.+ ++|.|+..+.+.+
T Consensus 333 DvA~ai~~~~~~~~~-------~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~~~~w~~~l~~~~ 399 (478)
T 4dqv_A 333 FVAEAIAVLGARVAG-------SSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDDFAEWLQRFEASL 399 (478)
T ss_dssp HHHHHHHHHHHTTC--------CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccc-------CCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCCHHHHHHHHHHHh
Confidence 999999999873211 1445688999999988 9999999999995 8776544 6777777766654
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.6e-21 Score=178.60 Aligned_cols=204 Identities=10% Similarity=-0.055 Sum_probs=144.6
Q ss_pred hhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 016468 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRK 94 (389)
Q Consensus 15 vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~ 94 (389)
.|+.++.|++++|++.|++|+||+||.++ |. . ...|+.+|..+|+++.+.
T Consensus 79 ~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~-------------~-----~~~y~~sK~~~e~~~~~~----------- 128 (286)
T 2zcu_A 79 QRAPQHRNVINAAKAAGVKFIAYTSLLHA-DT-------------S-----PLGLADEHIETEKMLADS----------- 128 (286)
T ss_dssp ---CHHHHHHHHHHHHTCCEEEEEEETTT-TT-------------C-----CSTTHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEECCCCC-CC-------------C-----cchhHHHHHHHHHHHHHc-----------
Confidence 58999999999999999999999999884 41 1 157999999999999764
Q ss_pred CceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCce
Q 016468 95 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP 174 (389)
Q Consensus 95 gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~ 174 (389)
+++++++||+.++|+.. ..+ ......+. . ..+++++.++++|++|+|++++.+++ .+...|++
T Consensus 129 ~~~~~ilrp~~~~~~~~-~~~---~~~~~~~~-~-~~~~~~~~~~~i~~~Dva~~~~~~~~-----------~~~~~g~~ 191 (286)
T 2zcu_A 129 GIVYTLLRNGWYSENYL-ASA---PAALEHGV-F-IGAAGDGKIASATRADYAAAAARVIS-----------EAGHEGKV 191 (286)
T ss_dssp CSEEEEEEECCBHHHHH-TTH---HHHHHHTE-E-EESCTTCCBCCBCHHHHHHHHHHHHH-----------SSSCTTCE
T ss_pred CCCeEEEeChHHhhhhH-HHh---HHhhcCCc-e-eccCCCCccccccHHHHHHHHHHHhc-----------CCCCCCce
Confidence 59999999987665422 222 22333443 2 35677888999999999999999997 43456889
Q ss_pred EEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHH---HHHHHHHHhhhccccccCCCCCCCHHHHHHhccc-c
Q 016468 175 YFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK---VFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT-H 250 (389)
Q Consensus 175 y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 250 (389)
||+++++++|+.|+++.+.+.+|.+.+...+|.+....... ..+.....+ .........+ .
T Consensus 192 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 256 (286)
T 2zcu_A 192 YELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADML---------------ADSDVGASKGGL 256 (286)
T ss_dssp EEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHH---------------HHHHHHHHTTTT
T ss_pred EEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHH---------------HHHHHHHhCCCC
Confidence 99999999999999999999999887777788764433210 000000000 0111111222 3
Q ss_pred ccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 251 YFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 251 ~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
..|++|++++|||+| ++++++++++++||+
T Consensus 257 ~~~~~~~~~~lg~~~-~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 257 FDDSKTLSKLIGHPT-TTLAESVSHLFNVNN 286 (286)
T ss_dssp CCCCCHHHHHHTSCC-CCHHHHHHGGGC---
T ss_pred ccCchHHHHHhCcCC-CCHHHHHHHHHhhcC
Confidence 578999999999855 499999999998874
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=175.56 Aligned_cols=202 Identities=10% Similarity=-0.008 Sum_probs=147.9
Q ss_pred HhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCC
Q 016468 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNR 93 (389)
Q Consensus 14 ~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~ 93 (389)
++|+.++.|++++|++.+++|+||+||.++ |+ . | ..|+.+|..+|+++.+.
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~----------~---~-----~~y~~~K~~~E~~~~~~---------- 131 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFA-EE----------S---I-----IPLAHVHLATEYAIRTT---------- 131 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTG-GG----------C---C-----STHHHHHHHHHHHHHHT----------
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CC----------C---C-----CchHHHHHHHHHHHHHc----------
Confidence 579999999999999999999999999884 41 1 1 47999999999999753
Q ss_pred CCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCc
Q 016468 94 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 173 (389)
Q Consensus 94 ~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 173 (389)
+++++++||+.++|+.....+ ...+..+.. ..+.+++.++|+|++|+|++++.+++ .+...|+
T Consensus 132 -~~~~~ilrp~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~-----------~~~~~g~ 194 (287)
T 2jl1_A 132 -NIPYTFLRNALYTDFFVNEGL---RASTESGAI--VTNAGSGIVNSVTRNELALAAATVLT-----------EEGHENK 194 (287)
T ss_dssp -TCCEEEEEECCBHHHHSSGGG---HHHHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHT-----------SSSCTTE
T ss_pred -CCCeEEEECCEeccccchhhH---HHHhhCCce--eccCCCCccCccCHHHHHHHHHHHhc-----------CCCCCCc
Confidence 599999999998886522222 223334542 24566788999999999999999987 3345688
Q ss_pred eEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHH---HHHHHHhhhccccccCCCCCCCHHHHHHh-ccc
Q 016468 174 PYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVF---SFFYSVLYPWLNRWWLPQPLILPAEVYKV-GVT 249 (389)
Q Consensus 174 ~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 249 (389)
+||+++++++|+.|+++.+.+.+|.+.+...+|.+......... +.....+ .+..... ...
T Consensus 195 ~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 259 (287)
T 2jl1_A 195 TYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEIT---------------AAIYDAISKGE 259 (287)
T ss_dssp EEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHH---------------HHHHHHHHTTT
T ss_pred EEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHH---------------HHHHHHHhCCC
Confidence 99999999999999999999999988777778876443322100 0000000 0011111 123
Q ss_pred cccchHHHHHhCCCCCCCChHHHHHHHHH
Q 016468 250 HYFSLLKAKDELCYVPIVSPREGMAATIS 278 (389)
Q Consensus 250 ~~~d~~ka~~~LG~~p~~sl~~~l~~~v~ 278 (389)
...|++|++++|| |.++++++++++++
T Consensus 260 ~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 260 ASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp TCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred CcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 4678999999999 55699999998875
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-19 Score=175.44 Aligned_cols=154 Identities=16% Similarity=0.059 Sum_probs=132.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+++.+.++|+.++.|++++|++.+++ |+||+||.. +|+ .+.|+.||..+|++++++.+
T Consensus 60 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~-~~~-------------------~~~Y~~sK~~~E~~~~~~~~ 119 (369)
T 3st7_A 60 EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQ-ATQ-------------------DNPYGESKLQGEQLLREYAE 119 (369)
T ss_dssp TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGG-GGS-------------------CSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchh-hcC-------------------CCCchHHHHHHHHHHHHHHH
Confidence 356778899999999999999999998 999999998 465 27899999999999999752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.+++++++||++||||+.. +.++.++..+..+....+ +++++.++++|++|+|++++.+++
T Consensus 120 -------~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~------ 185 (369)
T 3st7_A 120 -------EYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIE------ 185 (369)
T ss_dssp -------HHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHH------
T ss_pred -------HhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHh------
Confidence 25799999999999999775 357788888888886554 688999999999999999999997
Q ss_pred CCCCCCCCCC-CceEEEeCCCCCChHHHHHHHHHhCCCC
Q 016468 162 PGQKGRPIAS-GQPYFVSDGFPINTFEFIGPLLKTLDYD 199 (389)
Q Consensus 162 ~~~~~~~~~~-g~~y~i~~~~~~s~~e~~~~l~~~lg~~ 199 (389)
.+... +++||+++++++|+.|+++.+.+.+|.+
T Consensus 186 -----~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 186 -----GTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp -----TCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred -----CCcccCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 33333 7899999999999999999999998865
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.9e-18 Score=153.23 Aligned_cols=145 Identities=15% Similarity=0.087 Sum_probs=109.8
Q ss_pred hhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Q 016468 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKK 90 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~ 90 (389)
..+++|+.++.|++++|++.+++|+||+||.+++++ .+.. ..|+.+..| .+.|+.+|..+|+++..+..
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-~~~~-~~~~~~~~p----~~~Y~~sK~~~e~~~~~~~~----- 151 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFI-APGL-RLMDSGEVP----ENILPGVKALGEFYLNFLMK----- 151 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEE-ETTE-EGGGTTCSC----GGGHHHHHHHHHHHHHTGGG-----
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccC-CCCC-ccccCCcch----HHHHHHHHHHHHHHHHHHhh-----
Confidence 378899999999999999999999999999985443 3221 234555555 68999999999999888862
Q ss_pred CCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 016468 91 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA 170 (389)
Q Consensus 91 ~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~ 170 (389)
+.+++++++||+.||||+..... ...+....... ++ .++|+|++|+|++++.+++ .+..
T Consensus 152 --~~~~~~~ilrp~~v~g~~~~~~~------~~~~~~~~~~~-~~-~~~~i~~~Dva~ai~~~l~-----------~~~~ 210 (227)
T 3dhn_A 152 --EKEIDWVFFSPAADMRPGVRTGR------YRLGKDDMIVD-IV-GNSHISVEDYAAAMIDELE-----------HPKH 210 (227)
T ss_dssp --CCSSEEEEEECCSEEESCCCCCC------CEEESSBCCCC-TT-SCCEEEHHHHHHHHHHHHH-----------SCCC
T ss_pred --ccCccEEEEeCCcccCCCccccc------eeecCCCcccC-CC-CCcEEeHHHHHHHHHHHHh-----------Cccc
Confidence 36899999999999999875211 11222222221 22 2899999999999999998 6778
Q ss_pred CCceEEEeCCCCCChHH
Q 016468 171 SGQPYFVSDGFPINTFE 187 (389)
Q Consensus 171 ~g~~y~i~~~~~~s~~e 187 (389)
.|++|+++++++.++.+
T Consensus 211 ~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 211 HQERFTIGYLEHHHHHH 227 (227)
T ss_dssp CSEEEEEECCSCCC---
T ss_pred cCcEEEEEeehhcccCC
Confidence 89999999999988653
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=155.32 Aligned_cols=116 Identities=21% Similarity=0.304 Sum_probs=96.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcc-cCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE-IVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~-~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+.+..+++|+.++.|++++|.+.+++|+||+||.. +|+..+ ..+.+|++|..| .+.|+.||..+|++++.+..
T Consensus 77 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~-~~~~~~~~~~~~E~~~~~~----~~~Y~~sK~~~e~~~~~~~~ 151 (267)
T 3ay3_A 77 RPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNH-TIGYYPRTTRIDTEVPRRP----DSLYGLSKCFGEDLASLYYH 151 (267)
T ss_dssp CCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGG-GSTTSBTTSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHH-HhCCCCCCCCCCCCCCCCC----CChHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999998 687643 456788888766 68999999999999988752
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.+++++++||+.+|+... +++...+|+|++|+|++++.+++
T Consensus 152 -------~~gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~~~~ 193 (267)
T 3ay3_A 152 -------KFDIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKRAFV 193 (267)
T ss_dssp -------TTCCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHHHHH
T ss_pred -------HcCCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHHHHh
Confidence 3689999999999995311 22345789999999999999987
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-17 Score=160.24 Aligned_cols=217 Identities=16% Similarity=0.064 Sum_probs=146.6
Q ss_pred hhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCC
Q 016468 15 VNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNR 93 (389)
Q Consensus 15 vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~ 93 (389)
.|+.++.|++++|++.| ++|||+ |+ ||. +.+|+.+..| .+.|+.+|..+|+++.+.
T Consensus 94 ~n~~~~~~l~~aa~~~g~v~~~v~-S~----~g~----~~~e~~~~~p----~~~y~~sK~~~e~~l~~~---------- 150 (346)
T 3i6i_A 94 ESILDQIALVKAMKAVGTIKRFLP-SE----FGH----DVNRADPVEP----GLNMYREKRRVRQLVEES---------- 150 (346)
T ss_dssp GGGGGHHHHHHHHHHHCCCSEEEC-SC----CSS----CTTTCCCCTT----HHHHHHHHHHHHHHHHHT----------
T ss_pred hhHHHHHHHHHHHHHcCCceEEee-cc----cCC----CCCccCcCCC----cchHHHHHHHHHHHHHHc----------
Confidence 49999999999999999 999986 43 442 2356665555 689999999999999874
Q ss_pred CCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCc
Q 016468 94 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 173 (389)
Q Consensus 94 ~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 173 (389)
|++++++||+.+||.......... .....+....++|++++.++|+|++|+|++++.+++ .+...++
T Consensus 151 -g~~~tivrpg~~~g~~~~~~~~~~-~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~ 217 (346)
T 3i6i_A 151 -GIPFTYICCNSIASWPYYNNIHPS-EVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVD-----------DVRTLNK 217 (346)
T ss_dssp -TCCBEEEECCEESSCCCSCC------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTT-----------CGGGTTE
T ss_pred -CCCEEEEEecccccccCccccccc-cccCCCceEEEccCCCceEEecCHHHHHHHHHHHHh-----------CccccCe
Confidence 599999999999997654322211 112244556788999999999999999999999987 4455688
Q ss_pred eEEEeC-CCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHH--------HHHHHHHHhhhccccccCCCCCCCHHHHH
Q 016468 174 PYFVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGK--------VFSFFYSVLYPWLNRWWLPQPLILPAEVY 244 (389)
Q Consensus 174 ~y~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (389)
.|++++ ++.+|+.|+++.+.+.+|.+.+...+|..-..-... ....++... .
T Consensus 218 ~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~--------------- 278 (346)
T 3i6i_A 218 SVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIF----I--------------- 278 (346)
T ss_dssp EEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHH----T---------------
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHh----c---------------
Confidence 999985 689999999999999999988877777653321110 111111110 0
Q ss_pred Hhccccccch-----HHHHHh-CCCCCCCChHHHHHHHHHHHHHcccCCC
Q 016468 245 KVGVTHYFSL-----LKAKDE-LCYVPIVSPREGMAATISYWQDRKRKSL 288 (389)
Q Consensus 245 ~~~~~~~~d~-----~ka~~~-LG~~p~~sl~~~l~~~v~~~~~~~~~~~ 288 (389)
.+....++. .++.+. -+++|+ ++++.+++.++|++++.....
T Consensus 279 -~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~~~~~~ 326 (346)
T 3i6i_A 279 -KGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEKQPTAD 326 (346)
T ss_dssp -TCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC---------
T ss_pred -cCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhccccccc
Confidence 000011222 123333 367775 999999999999988665443
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-17 Score=157.99 Aligned_cols=153 Identities=18% Similarity=0.207 Sum_probs=126.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++...+++|+.|+.|++++|.+.+++|+|++||..+ + .| .+.|+.||+.+|+++..+...
T Consensus 109 ~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~-~--------------~p----~~~Y~~sK~~~E~~~~~~~~~ 169 (344)
T 2gn4_A 109 YNPLECIKTNIMGASNVINACLKNAISQVIALSTDKA-A--------------NP----INLYGATKLCSDKLFVSANNF 169 (344)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGG-S--------------SC----CSHHHHHHHHHHHHHHHGGGC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCcc-C--------------CC----ccHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999774 2 12 479999999999999988631
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCC-CcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
. ...+++++++||++|||+++ +.++.++..+..|. +..+ .+++..++|+|++|+|++++.+++.
T Consensus 170 ~----~~~g~~~~~vRpg~v~g~~~-~~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~--------- 234 (344)
T 2gn4_A 170 K----GSSQTQFSVVRYGNVVGSRG-SVVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKR--------- 234 (344)
T ss_dssp C----CSSCCEEEEECCCEETTCTT-SHHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHH---------
T ss_pred h----CCCCcEEEEEEeccEECCCC-CHHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhh---------
Confidence 1 22579999999999999975 45678888888887 5544 4788889999999999999999972
Q ss_pred CCCCCCCceEEEeCCCCCChHHHHHHHHHhCC
Q 016468 166 GRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 197 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg 197 (389)
+ ..|++|++.++ ++++.|+++.+.+.++
T Consensus 235 --~-~~g~~~~~~~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 235 --M-HGGEIFVPKIP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp --C-CSSCEEEECCC-EEEHHHHHHHHCTTCC
T ss_pred --c-cCCCEEecCCC-cEEHHHHHHHHHHhCC
Confidence 2 25778987665 6999999999987654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=4.8e-16 Score=145.86 Aligned_cols=195 Identities=14% Similarity=0.127 Sum_probs=134.6
Q ss_pred HhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCC
Q 016468 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNR 93 (389)
Q Consensus 14 ~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~ 93 (389)
..|+.+++|++++|++.|++|+||+||.++ +++.++ .+...+..+|+.+.+.
T Consensus 80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~----------~~~~~~--------~~~~~~~~~e~~~~~~---------- 131 (289)
T 3e48_A 80 FKRIPEVENLVYAAKQSGVAHIIFIGYYAD----------QHNNPF--------HMSPYFGYASRLLSTS---------- 131 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEESCC----------STTCCS--------TTHHHHHHHHHHHHHH----------
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEEcccCC----------CCCCCC--------ccchhHHHHHHHHHHc----------
Confidence 458999999999999999999999999652 233332 2334445677777654
Q ss_pred CCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCc
Q 016468 94 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 173 (389)
Q Consensus 94 ~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 173 (389)
|++++++||+.+||+.. ..+......+. ...+.+++.++|+|++|+|++++.++. .+...|+
T Consensus 132 -g~~~~ilrp~~~~~~~~----~~~~~~~~~~~--~~~~~g~~~~~~i~~~Dva~~~~~~l~-----------~~~~~g~ 193 (289)
T 3e48_A 132 -GIDYTYVRMAMYMDPLK----PYLPELMNMHK--LIYPAGDGRINYITRNDIARGVIAIIK-----------NPDTWGK 193 (289)
T ss_dssp -CCEEEEEEECEESTTHH----HHHHHHHHHTE--ECCCCTTCEEEEECHHHHHHHHHHHHH-----------CGGGTTC
T ss_pred -CCCEEEEeccccccccH----HHHHHHHHCCC--EecCCCCceeeeEEHHHHHHHHHHHHc-----------CCCcCCc
Confidence 59999999999998722 22223333333 234667889999999999999999997 4444588
Q ss_pred eEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHH----HHHHhcc-
Q 016468 174 PYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPA----EVYKVGV- 248 (389)
Q Consensus 174 ~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 248 (389)
+|+++ ++++|+.|+++.+.+.+|.+.+...+|..-.... + ..|.-.+. .......
T Consensus 194 ~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~--~-----------------~~p~~~~~~~~~~~~~~~~g 253 (289)
T 3e48_A 194 RYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEM--Y-----------------DEPKGFGALLASMYHAGARG 253 (289)
T ss_dssp EEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHH--T-----------------CCSTTHHHHHHHHHHHHHTT
T ss_pred eEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHH--h-----------------cCCccHHHHHHHHHHHHHCC
Confidence 99999 9999999999999999998876666665422111 0 11000011 1111111
Q ss_pred ccccchHHHHHhCCCCCCCChHHHHHH
Q 016468 249 THYFSLLKAKDELCYVPIVSPREGMAA 275 (389)
Q Consensus 249 ~~~~d~~ka~~~LG~~p~~sl~~~l~~ 275 (389)
....+.+..++.+|++|+ ++++.+++
T Consensus 254 ~~~~~~~~~~~~~G~~p~-~~~~~~~~ 279 (289)
T 3e48_A 254 LLDQESNDFKQLVNDQPQ-TLQSFLQE 279 (289)
T ss_dssp TTCCCCSHHHHHHSSCCC-CHHHHHHC
T ss_pred CccccCchHHHHhCCCCC-CHHHHHHH
Confidence 123456677888999998 88887753
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.6e-16 Score=145.57 Aligned_cols=150 Identities=18% Similarity=0.159 Sum_probs=121.8
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCc-ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGK-EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~-~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+.+.++++|+.|+.+++++|++.+++|+|++||.. +||.. ...+.+|+.+..| .+.|+.||..+|.+++.+.
T Consensus 77 ~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~-~~g~~~~~~~~~e~~~~~~----~~~Y~~sK~~~e~~~~~~a 151 (267)
T 3rft_A 77 EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNH-TIGYYPQTERLGPDVPARP----DGLYGVSKCFGENLARMYF 151 (267)
T ss_dssp CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG-GGTTSBTTSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchH-HhCCCCCCCCCCCCCCCCC----CChHHHHHHHHHHHHHHHH
Confidence 3466789999999999999999999999999999998 57643 3446788887776 7899999999999998775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
. +.+++++++||+.|||+ ++++....+|+|++|+++++..+++
T Consensus 152 ~-------~~g~~~~~vr~~~v~~~---------------------~~~~~~~~~~~~~~d~a~~~~~~~~--------- 194 (267)
T 3rft_A 152 D-------KFGQETALVRIGSCTPE---------------------PNNYRMLSTWFSHDDFVSLIEAVFR--------- 194 (267)
T ss_dssp H-------HHCCCEEEEEECBCSSS---------------------CCSTTHHHHBCCHHHHHHHHHHHHH---------
T ss_pred H-------HhCCeEEEEEeecccCC---------------------CCCCCceeeEEcHHHHHHHHHHHHh---------
Confidence 2 25799999999999986 2345667789999999999999997
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCC
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLP 201 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~ 201 (389)
.+...+.++++.++++.++.++... +.+|+.++
T Consensus 195 --~~~~~~~~~~~~s~~~~~~~~~~~~--~~~g~~p~ 227 (267)
T 3rft_A 195 --APVLGCPVVWGASANDAGWWDNSHL--GFLGWKPK 227 (267)
T ss_dssp --CSCCCSCEEEECCCCTTCCBCCGGG--GGGCCCCC
T ss_pred --CCCCCceEEEEeCCCCCCcccChhH--HHCCCCCC
Confidence 4455566888888888888776443 67787654
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.3e-16 Score=140.93 Aligned_cols=138 Identities=16% Similarity=0.158 Sum_probs=109.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++..+++|+.++.|++++|++.+++|+|++||.++ +.+ |..+ . +.+.|+.+|..+|+++++
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~-~~~-------~~~~-~----~~~~Y~~sK~~~e~~~~~---- 160 (236)
T 3e8x_A 98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT-VDP-------DQGP-M----NMRHYLVAKRLADDELKR---- 160 (236)
T ss_dssp SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC-SCG-------GGSC-G----GGHHHHHHHHHHHHHHHH----
T ss_pred CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC-CCC-------CCCh-h----hhhhHHHHHHHHHHHHHH----
Confidence 4677889999999999999999999999999999763 221 1111 1 258999999999999873
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
.+++++++||+.|||+...+. .....++....+++|++|+|++++.+++
T Consensus 161 -------~gi~~~~lrpg~v~~~~~~~~-------------~~~~~~~~~~~~~i~~~Dva~~~~~~~~----------- 209 (236)
T 3e8x_A 161 -------SSLDYTIVRPGPLSNEESTGK-------------VTVSPHFSEITRSITRHDVAKVIAELVD----------- 209 (236)
T ss_dssp -------SSSEEEEEEECSEECSCCCSE-------------EEEESSCSCCCCCEEHHHHHHHHHHHTT-----------
T ss_pred -------CCCCEEEEeCCcccCCCCCCe-------------EEeccCCCcccCcEeHHHHHHHHHHHhc-----------
Confidence 469999999999999865421 2223455567899999999999999997
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHH
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLL 193 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~ 193 (389)
.+...|++|+++++ ++++.|+++.+.
T Consensus 210 ~~~~~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 210 QQHTIGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp CGGGTTEEEEEEEC-SEEHHHHHHTC-
T ss_pred CccccCCeEEEeCC-CcCHHHHHHHhc
Confidence 44567999999888 599999988664
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.7e-16 Score=141.72 Aligned_cols=135 Identities=14% Similarity=0.145 Sum_probs=107.0
Q ss_pred hhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Q 016468 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKK 90 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~ 90 (389)
..+++|+.++.+++++|++.+++|+|++||.. ++++. +.+| .+..| .+.|+.+|..+|+++++.
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~-~~~~~---~~~e-~~~~~----~~~Y~~sK~~~e~~~~~~------- 140 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF-SLQPE---KWIG-AGFDA----LKDYYIAKHFADLYLTKE------- 140 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT-TTCGG---GCCS-HHHHH----THHHHHHHHHHHHHHHHS-------
T ss_pred CcEeEeHHHHHHHHHHHHHhCCCEEEEECccc-ccCCC---cccc-ccccc----ccHHHHHHHHHHHHHHhc-------
Confidence 46789999999999999999999999999987 35432 2344 33223 689999999999999732
Q ss_pred CCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 016468 91 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA 170 (389)
Q Consensus 91 ~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~ 170 (389)
.+++++++||+.+||+...+.+ .. ++...+++|++|+|++++.+++ .+..
T Consensus 141 ---~~i~~~ilrp~~v~g~~~~~~~--------------~~--~~~~~~~i~~~Dva~~i~~~l~-----------~~~~ 190 (219)
T 3dqp_A 141 ---TNLDYTIIQPGALTEEEATGLI--------------DI--NDEVSASNTIGDVADTIKELVM-----------TDHS 190 (219)
T ss_dssp ---CCCEEEEEEECSEECSCCCSEE--------------EE--SSSCCCCEEHHHHHHHHHHHHT-----------CGGG
T ss_pred ---cCCcEEEEeCceEecCCCCCcc--------------cc--CCCcCCcccHHHHHHHHHHHHh-----------Cccc
Confidence 5799999999999998665321 12 2667899999999999999997 4455
Q ss_pred CCceEEEeCCCCCChHHHHHHH
Q 016468 171 SGQPYFVSDGFPINTFEFIGPL 192 (389)
Q Consensus 171 ~g~~y~i~~~~~~s~~e~~~~l 192 (389)
.|++|++++++ .+++|+.+.-
T Consensus 191 ~g~~~~i~~g~-~~~~e~~~~~ 211 (219)
T 3dqp_A 191 IGKVISMHNGK-TAIKEALESL 211 (219)
T ss_dssp TTEEEEEEECS-EEHHHHHHTT
T ss_pred cCcEEEeCCCC-ccHHHHHHHH
Confidence 68999998875 8999887643
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-15 Score=143.13 Aligned_cols=158 Identities=15% Similarity=0.075 Sum_probs=119.0
Q ss_pred hHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCC
Q 016468 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNN 92 (389)
Q Consensus 13 ~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~ 92 (389)
.+.|+.+++|++++|++.|++|+|++||.+ +|+. +++. + ...|+.+|..+|+++++.
T Consensus 88 ~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~-~~~~------~~~~---~----~~~y~~sK~~~e~~~~~~--------- 144 (299)
T 2wm3_A 88 QEQEVKQGKLLADLARRLGLHYVVYSGLEN-IKKL------TAGR---L----AAAHFDGKGEVEEYFRDI--------- 144 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEECCCCC-HHHH------TTTS---C----CCHHHHHHHHHHHHHHHH---------
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEEcCcc-cccc------CCCc---c----cCchhhHHHHHHHHHHHC---------
Confidence 456889999999999999999999988877 5642 1111 1 478999999999999875
Q ss_pred CCCceEEEEecCceecCCCCCCHHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCC-CC
Q 016468 93 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRP-IA 170 (389)
Q Consensus 93 ~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~-~~ 170 (389)
|++++++||+.+||+......+. ....|.. ......++..++|+|++|+++++..+++ .+ ..
T Consensus 145 --gi~~~ilrp~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~ 208 (299)
T 2wm3_A 145 --GVPMTSVRLPCYFENLLSHFLPQ---KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLK-----------MPEKY 208 (299)
T ss_dssp --TCCEEEEECCEEGGGGGTTTCCE---ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHH-----------SHHHH
T ss_pred --CCCEEEEeecHHhhhchhhcCCc---ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHc-----------Chhhh
Confidence 48999999999999743321111 1123322 1122346788999999999999999987 32 23
Q ss_pred CCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHH
Q 016468 171 SGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 210 (389)
Q Consensus 171 ~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~ 210 (389)
.|+.|++++ +++|+.|+++.+.+.+|.+.+...+|.+..
T Consensus 209 ~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 247 (299)
T 2wm3_A 209 VGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDY 247 (299)
T ss_dssp TTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHH
T ss_pred CCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHH
Confidence 578999986 679999999999999998877677776644
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=9e-17 Score=155.86 Aligned_cols=157 Identities=15% Similarity=0.166 Sum_probs=117.4
Q ss_pred HhhhhHHHHHHHHHHHcC-CCeEEEecCCce-ecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 14 EVNINGTCHVIEACLEFG-IQRLVYVSTYNV-VFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 14 ~vNv~gt~nll~aa~~~g-vkrlV~~SS~~v-vyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
+.|..+ +|++++|++.| ++||||+||..+ .|+. . + ...|+.||..+|+++++.
T Consensus 87 ~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~-~----~~~y~~sK~~~E~~~~~~-------- 141 (352)
T 1xgk_A 87 DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------W-P----AVPMWAPKFTVENYVRQL-------- 141 (352)
T ss_dssp CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------C-C----CCTTTHHHHHHHHHHHTS--------
T ss_pred HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------C-C----CccHHHHHHHHHHHHHHc--------
Confidence 457777 99999999999 999999999862 2221 1 1 368999999999999764
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHH--HHcCCCc-ceecCCCccccceeH-HHHHHHHHHHHhcccCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSL--AKLGLVP-FKIGEPSVKTDWIYV-DNLVLALILASMGLLDDIPGQKGR 167 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~--~~~g~~~-~~~g~~~~~~~~v~v-dDla~a~~~a~~~l~~~~~~~~~~ 167 (389)
+++++++||+ +||++.......++.. ...|... ..++++++.++++|+ +|+|++++.+++. .
T Consensus 142 ---gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~----------~ 207 (352)
T 1xgk_A 142 ---GLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKD----------G 207 (352)
T ss_dssp ---SSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHH----------C
T ss_pred ---CCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhC----------C
Confidence 5899999976 7998765322112211 1234322 346778889999999 9999999999972 1
Q ss_pred C-CCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHH
Q 016468 168 P-IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHA 210 (389)
Q Consensus 168 ~-~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~ 210 (389)
+ ...|++||+++ +++|+.|+++.+.+.+|.+.+...+|.+.+
T Consensus 208 ~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp~~~~ 250 (352)
T 1xgk_A 208 PQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPKVEI 250 (352)
T ss_dssp HHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSSCCC
T ss_pred chhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECCHHHH
Confidence 1 23588999996 679999999999999999877777775543
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-15 Score=136.48 Aligned_cols=146 Identities=15% Similarity=0.100 Sum_probs=85.8
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
..++|+.+++|++++|++.+++|+|++||..++|+.....+..|+.+..| .+.|+.+|..+|.+..-..
T Consensus 75 ~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~----~~~y~~~k~~~e~~~~~~~------- 143 (221)
T 3ew7_A 75 EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLRE----APYYPTARAQAKQLEHLKS------- 143 (221)
T ss_dssp TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-----------------------CCCSCCHHHHHHHHHHHHT-------
T ss_pred ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCC----HHHHHHHHHHHHHHHHHHh-------
Confidence 35779999999999999999999999999987776655445566666655 6889999999998732221
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
...+++++++||+.+|||+... ..+ ...+......+++ .+++|++|+|++++.+++ .+...
T Consensus 144 ~~~gi~~~ivrp~~v~g~~~~~--~~~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~-----------~~~~~ 204 (221)
T 3ew7_A 144 HQAEFSWTYISPSAMFEPGERT--GDY---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIE-----------RPNHL 204 (221)
T ss_dssp TTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHHHHHH-----------SCSCT
T ss_pred hccCccEEEEeCcceecCCCcc--Cce---EeccccceecCCC---CceEeHHHHHHHHHHHHh-----------Ccccc
Confidence 1268999999999999994431 111 1112223333333 369999999999999998 66778
Q ss_pred CceEEEeCCCCCChHH
Q 016468 172 GQPYFVSDGFPINTFE 187 (389)
Q Consensus 172 g~~y~i~~~~~~s~~e 187 (389)
|+.|+++++.+.+-.|
T Consensus 205 g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 205 NEHFTVAGKLEHHHHH 220 (221)
T ss_dssp TSEEECCC--------
T ss_pred CCEEEECCCCcccccc
Confidence 9999999988776554
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-15 Score=135.43 Aligned_cols=146 Identities=14% Similarity=0.067 Sum_probs=108.4
Q ss_pred hhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC
Q 016468 11 RVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKK 90 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~ 90 (389)
..+++|+.++.+++++|++.+++|+|++||..+ + ++..|..+ .....|+.+|..+|+++++
T Consensus 104 ~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~-~--------~~~~~~~~--~~~~~y~~sK~~~e~~~~~-------- 164 (253)
T 1xq6_A 104 YPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGG-T--------NPDHPLNK--LGNGNILVWKRKAEQYLAD-------- 164 (253)
T ss_dssp SHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTT-T--------CTTCGGGG--GGGCCHHHHHHHHHHHHHT--------
T ss_pred cceeeeHHHHHHHHHHHHHcCCCEEEEEcCccC-C--------CCCCcccc--ccchhHHHHHHHHHHHHHh--------
Confidence 467999999999999999999999999999874 3 22222111 0124688899999999864
Q ss_pred CCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCC
Q 016468 91 NNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIA 170 (389)
Q Consensus 91 ~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~ 170 (389)
.+++++++||+.+||+..... .+ ..+....++++ ..+++|++|+|++++.+++ .+..
T Consensus 165 ---~~i~~~~vrpg~v~~~~~~~~--~~----~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~-----------~~~~ 221 (253)
T 1xq6_A 165 ---SGTPYTIIRAGGLLDKEGGVR--EL----LVGKDDELLQT---DTKTVPRADVAEVCIQALL-----------FEEA 221 (253)
T ss_dssp ---SSSCEEEEEECEEECSCSSSS--CE----EEESTTGGGGS---SCCEEEHHHHHHHHHHHTT-----------CGGG
T ss_pred ---CCCceEEEecceeecCCcchh--hh----hccCCcCCcCC---CCcEEcHHHHHHHHHHHHc-----------Cccc
Confidence 369999999999999875411 00 01111112221 3569999999999999987 4445
Q ss_pred CCceEEEeCC---CCCChHHHHHHHHHhCCC
Q 016468 171 SGQPYFVSDG---FPINTFEFIGPLLKTLDY 198 (389)
Q Consensus 171 ~g~~y~i~~~---~~~s~~e~~~~l~~~lg~ 198 (389)
.|++||++++ +++++.|+++.+.+.+|.
T Consensus 222 ~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 222 KNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp TTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 6889999986 469999999999999885
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.4e-14 Score=130.55 Aligned_cols=142 Identities=10% Similarity=-0.038 Sum_probs=100.2
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccC--CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIV--NGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFK 89 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~--~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~ 89 (389)
..++|+.+++|++++|++.| +|+|++||.+++|+..... ..+|.....| .+.|+.+|..+|.+ ..+.
T Consensus 78 ~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~----~~~y~~sK~~~e~~-~~~~----- 146 (224)
T 3h2s_A 78 RGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS----QPWYDGALYQYYEY-QFLQ----- 146 (224)
T ss_dssp CTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG----STTHHHHHHHHHHH-HHHT-----
T ss_pred hhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc----chhhHHHHHHHHHH-HHHH-----
Confidence 46789999999999999999 9999999988666544322 2233332222 68899999999954 3443
Q ss_pred CCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCC
Q 016468 90 KNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPI 169 (389)
Q Consensus 90 ~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~ 169 (389)
++.+++++++||+.+||++.... ...+.... ..+.+..+++|++|+|++++.+++ .+.
T Consensus 147 --~~~~i~~~ivrp~~v~g~~~~~~-------~~~~~~~~--~~~~~~~~~i~~~DvA~~~~~~l~-----------~~~ 204 (224)
T 3h2s_A 147 --MNANVNWIGISPSEAFPSGPATS-------YVAGKDTL--LVGEDGQSHITTGNMALAILDQLE-----------HPT 204 (224)
T ss_dssp --TCTTSCEEEEEECSBCCCCCCCC-------EEEESSBC--CCCTTSCCBCCHHHHHHHHHHHHH-----------SCC
T ss_pred --hcCCCcEEEEcCccccCCCcccC-------ceeccccc--ccCCCCCceEeHHHHHHHHHHHhc-----------Ccc
Confidence 23689999999999999955422 01111111 123455789999999999999998 666
Q ss_pred CCCceEEEeCCCCCChH
Q 016468 170 ASGQPYFVSDGFPINTF 186 (389)
Q Consensus 170 ~~g~~y~i~~~~~~s~~ 186 (389)
..|++|++++.++.+..
T Consensus 205 ~~g~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 205 AIRDRIVVRDADLEHHH 221 (224)
T ss_dssp CTTSEEEEEECC-----
T ss_pred ccCCEEEEecCcchhcc
Confidence 78999999987665543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.4e-15 Score=132.23 Aligned_cols=131 Identities=20% Similarity=0.113 Sum_probs=99.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+.++++|+.++.+++++|++.+++|+|++||.. +|+. | .+.|+.+|..+|+++++.
T Consensus 81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~-~~~~-------------~----~~~y~~sK~~~e~~~~~~--- 139 (215)
T 2a35_A 81 GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALG-ADAK-------------S----SIFYNRVKGELEQALQEQ--- 139 (215)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT-CCTT-------------C----SSHHHHHHHHHHHHHTTS---
T ss_pred CCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcc-cCCC-------------C----ccHHHHHHHHHHHHHHHc---
Confidence 467788999999999999999999999999999988 4531 1 478999999999998754
Q ss_pred CCCCCCCCCce-EEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 87 PFKKNNRKCLY-TCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 87 ~~~~~~~~gl~-~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
+++ ++++||+.+|||+.... ++..+. +...+ .++ ...+++|++|+|++++.+++
T Consensus 140 --------~~~~~~~vrp~~v~g~~~~~~---~~~~~~-~~~~~-~~~--~~~~~i~~~Dva~~~~~~~~---------- 194 (215)
T 2a35_A 140 --------GWPQLTIARPSLLFGPREEFR---LAEILA-APIAR-ILP--GKYHGIEACDLARALWRLAL---------- 194 (215)
T ss_dssp --------CCSEEEEEECCSEESTTSCEE---GGGGTT-CCCC-------CHHHHHHHHHHHHHHHHHHT----------
T ss_pred --------CCCeEEEEeCceeeCCCCcch---HHHHHH-Hhhhh-ccC--CCcCcEeHHHHHHHHHHHHh----------
Confidence 588 99999999999976521 112222 22122 233 26799999999999999997
Q ss_pred CCCCCCCceEEEeCCCCCChH
Q 016468 166 GRPIASGQPYFVSDGFPINTF 186 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s~~ 186 (389)
.+. +++||+++++++++.
T Consensus 195 -~~~--~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 195 -EEG--KGVRFVESDELRKLG 212 (215)
T ss_dssp -CCC--SEEEEEEHHHHHHHH
T ss_pred -cCC--CCceEEcHHHHHHhh
Confidence 332 779999988765543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.6e-15 Score=139.96 Aligned_cols=160 Identities=16% Similarity=0.108 Sum_probs=114.3
Q ss_pred hhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCC
Q 016468 15 VNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNR 93 (389)
Q Consensus 15 vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~ 93 (389)
.|+.++.|++++|++.| ++|||+ |+ ||...... +.+..| ....| .+|..+|+++.+.
T Consensus 91 ~~~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~~~~~---~~~~~p---~~~~y-~sK~~~e~~~~~~---------- 148 (313)
T 1qyd_A 91 HHILEQLKLVEAIKEAGNIKRFLP-SE----FGMDPDIM---EHALQP---GSITF-IDKRKVRRAIEAA---------- 148 (313)
T ss_dssp TTTTTHHHHHHHHHHSCCCSEEEC-SC----CSSCTTSC---CCCCSS---TTHHH-HHHHHHHHHHHHT----------
T ss_pred hhHHHHHHHHHHHHhcCCCceEEe-cC----CcCCcccc---ccCCCC---CcchH-HHHHHHHHHHHhc----------
Confidence 38899999999999999 999996 43 44322111 122222 13578 9999999999754
Q ss_pred CCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCc
Q 016468 94 KCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQ 173 (389)
Q Consensus 94 ~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~ 173 (389)
+++++++||+.++|+...............+.....++++++.++++|++|++++++.+++ .+...|+
T Consensus 149 -g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~ 216 (313)
T 1qyd_A 149 -SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID-----------DPQTLNK 216 (313)
T ss_dssp -TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT-----------CGGGSSS
T ss_pred -CCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHh-----------CcccCCc
Confidence 5899999999998853221110000001123334567888999999999999999999986 4444578
Q ss_pred eEEEeC-CCCCChHHHHHHHHHhCCCCCCccccCHH
Q 016468 174 PYFVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVP 208 (389)
Q Consensus 174 ~y~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~ 208 (389)
.|++.+ ++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus 217 ~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 252 (313)
T 1qyd_A 217 TMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQ 252 (313)
T ss_dssp EEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred eEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCHH
Confidence 888876 47899999999999999988777777754
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=7.3e-14 Score=132.83 Aligned_cols=154 Identities=16% Similarity=0.101 Sum_probs=114.1
Q ss_pred hhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 016468 17 INGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKC 95 (389)
Q Consensus 17 v~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~g 95 (389)
+.+++|++++|++.| ++|||+ |+ ||.. .+|..+..| ....| .+|..+|+++.+. +
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~----~~~~~~~~p---~~~~y-~sK~~~e~~~~~~-----------~ 147 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFLP-SD----FGVE----EDRINALPP---FEALI-ERKRMIRRAIEEA-----------N 147 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEEC-SC----CSSC----TTTCCCCHH---HHHHH-HHHHHHHHHHHHT-----------T
T ss_pred hHHHHHHHHHHHhcCCCCEEEe-ec----cccC----cccccCCCC---cchhH-HHHHHHHHHHHhc-----------C
Confidence 678999999999998 999985 43 4422 133332222 13578 9999999999764 5
Q ss_pred ceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceE
Q 016468 96 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPY 175 (389)
Q Consensus 96 l~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y 175 (389)
++++++||+.+++. .++.++.....+.....+++++..++++|++|++++++.+++ .+...++.|
T Consensus 148 ~~~~~lr~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~ 212 (318)
T 2r6j_A 148 IPYTYVSANCFASY----FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVAT-----------DPRALNRVV 212 (318)
T ss_dssp CCBEEEECCEEHHH----HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTT-----------CGGGTTEEE
T ss_pred CCeEEEEcceehhh----hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhc-----------CccccCeEE
Confidence 89999999887763 223333222234445667888999999999999999999986 334457788
Q ss_pred EEeC-CCCCChHHHHHHHHHhCCCCCCccccCHHH
Q 016468 176 FVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVPH 209 (389)
Q Consensus 176 ~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~ 209 (389)
++.+ ++.+|+.|+++.+.+.+|.+.+...+|...
T Consensus 213 ~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 247 (318)
T 2r6j_A 213 IYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEE 247 (318)
T ss_dssp ECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHH
T ss_pred EecCCCCccCHHHHHHHHHHHhCCCCceeecCHHH
Confidence 8875 589999999999999999987777788653
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=2.1e-13 Score=128.75 Aligned_cols=157 Identities=15% Similarity=0.142 Sum_probs=114.0
Q ss_pred hhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 016468 16 NINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRK 94 (389)
Q Consensus 16 Nv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~ 94 (389)
++.++.|++++|++.| ++|||+ |+ ||.. .+|..+..| ..+.| .+|..+|+++.+.
T Consensus 89 ~~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~----~~~~~~~~p---~~~~y-~sK~~~e~~~~~~----------- 144 (308)
T 1qyc_A 89 QIESQVNIIKAIKEVGTVKRFFP-SE----FGND----VDNVHAVEP---AKSVF-EVKAKVRRAIEAE----------- 144 (308)
T ss_dssp GSGGGHHHHHHHHHHCCCSEEEC-SC----CSSC----TTSCCCCTT---HHHHH-HHHHHHHHHHHHH-----------
T ss_pred hhhhHHHHHHHHHhcCCCceEee-cc----cccC----ccccccCCc---chhHH-HHHHHHHHHHHhc-----------
Confidence 3678899999999998 999984 44 3321 133333222 13578 9999999999865
Q ss_pred CceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCce
Q 016468 95 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQP 174 (389)
Q Consensus 95 gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~ 174 (389)
+++++++||+.++|+......... .....+....+++++++.++|+|++|++++++.+++ .+...++.
T Consensus 145 ~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~ 212 (308)
T 1qyc_A 145 GIPYTYVSSNCFAGYFLRSLAQAG-LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD-----------DPRTLNKT 212 (308)
T ss_dssp TCCBEEEECCEEHHHHTTTTTCTT-CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS-----------CGGGTTEE
T ss_pred CCCeEEEEeceecccccccccccc-ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh-----------CccccCeE
Confidence 489999999999885332111100 001123345667888999999999999999998876 34445788
Q ss_pred EEEeC-CCCCChHHHHHHHHHhCCCCCCccccCHH
Q 016468 175 YFVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVP 208 (389)
Q Consensus 175 y~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~ 208 (389)
|++.+ ++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus 213 ~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 247 (308)
T 1qyc_A 213 LYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEE 247 (308)
T ss_dssp EECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHH
T ss_pred EEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHH
Confidence 88876 57899999999999999988777777754
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.7e-13 Score=127.98 Aligned_cols=154 Identities=16% Similarity=0.122 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 016468 17 INGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKC 95 (389)
Q Consensus 17 v~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~g 95 (389)
+.++.|++++|++.| ++|||+ | +||... +|+.+..| ..+.| .+|..+|+++.+. +
T Consensus 90 ~~~~~~l~~aa~~~g~v~~~v~-S----~~g~~~----~~~~~~~p---~~~~y-~sK~~~e~~~~~~-----------~ 145 (321)
T 3c1o_A 90 ISSQIHIINAIKAAGNIKRFLP-S----DFGCEE----DRIKPLPP---FESVL-EKKRIIRRAIEAA-----------A 145 (321)
T ss_dssp SGGGHHHHHHHHHHCCCCEEEC-S----CCSSCG----GGCCCCHH---HHHHH-HHHHHHHHHHHHH-----------T
T ss_pred hhhHHHHHHHHHHhCCccEEec-c----ccccCc----cccccCCC---cchHH-HHHHHHHHHHHHc-----------C
Confidence 678999999999999 999983 3 344321 23222211 13579 9999999999765 4
Q ss_pred ceEEEEecCceecCCCCCCHHHHHHH---HHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCC
Q 016468 96 LYTCAVRPAAIYGPGEERHLPRIVSL---AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASG 172 (389)
Q Consensus 96 l~~~ilRp~~IyGp~~~~~~~~li~~---~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g 172 (389)
++++++||+.++|+. .+.+... ...+.....+++++..++++|++|++++++.+++ .+...|
T Consensus 146 ~~~~~lrp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~g 210 (321)
T 3c1o_A 146 LPYTYVSANCFGAYF----VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVAC-----------DPRCCN 210 (321)
T ss_dssp CCBEEEECCEEHHHH----HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHH-----------CGGGTT
T ss_pred CCeEEEEeceecccc----ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHh-----------CccccC
Confidence 899999999888741 2222211 1233345667888999999999999999999997 444458
Q ss_pred ceEEEeC-CCCCChHHHHHHHHHhCCCCCCccccCHHH
Q 016468 173 QPYFVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVPH 209 (389)
Q Consensus 173 ~~y~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~ 209 (389)
+.|++.+ ++.+|+.|+++.+.+.+|.+.+...+|...
T Consensus 211 ~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~~ 248 (321)
T 3c1o_A 211 RIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDEQ 248 (321)
T ss_dssp EEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHHH
T ss_pred eEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHHH
Confidence 8888876 589999999999999999988777788653
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.36 E-value=6.4e-13 Score=125.36 Aligned_cols=156 Identities=15% Similarity=0.095 Sum_probs=112.9
Q ss_pred hhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCC
Q 016468 17 INGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKC 95 (389)
Q Consensus 17 v~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~g 95 (389)
+.++.|++++|++.| ++|||+ |+ ||... +|..+..| ..+.| .+|..+|+++.+. +
T Consensus 89 ~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~~----~~~~~~~p---~~~~y-~sK~~~e~~~~~~-----------~ 144 (307)
T 2gas_A 89 IEDQVKIIKAIKEAGNVKKFFP-SE----FGLDV----DRHDAVEP---VRQVF-EEKASIRRVIEAE-----------G 144 (307)
T ss_dssp GGGHHHHHHHHHHHCCCSEEEC-SC----CSSCT----TSCCCCTT---HHHHH-HHHHHHHHHHHHH-----------T
T ss_pred cccHHHHHHHHHhcCCceEEee-cc----cccCc----ccccCCCc---chhHH-HHHHHHHHHHHHc-----------C
Confidence 678999999999998 999984 43 44221 23232222 13578 9999999999765 4
Q ss_pred ceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceE
Q 016468 96 LYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPY 175 (389)
Q Consensus 96 l~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y 175 (389)
++++++||+.++|+........ ......+....+++++++.++++|++|++++++.+++ .+...|+.|
T Consensus 145 i~~~~lrp~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~-----------~~~~~~~~~ 212 (307)
T 2gas_A 145 VPYTYLCCHAFTGYFLRNLAQL-DATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAN-----------DPNTLNKAV 212 (307)
T ss_dssp CCBEEEECCEETTTTGGGTTCT-TCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHT-----------CGGGTTEEE
T ss_pred CCeEEEEcceeecccccccccc-ccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHc-----------CccccCceE
Confidence 8999999999887532211000 0001123335567888899999999999999999986 344457888
Q ss_pred EEeC-CCCCChHHHHHHHHHhCCCCCCccccCHH
Q 016468 176 FVSD-GFPINTFEFIGPLLKTLDYDLPKSWLAVP 208 (389)
Q Consensus 176 ~i~~-~~~~s~~e~~~~l~~~lg~~~~~~~~p~~ 208 (389)
++.+ ++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus 213 ~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 246 (307)
T 2gas_A 213 HIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEE 246 (307)
T ss_dssp ECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHH
T ss_pred EEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHH
Confidence 8876 47899999999999999988777777754
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=8.1e-12 Score=110.44 Aligned_cols=121 Identities=16% Similarity=0.202 Sum_probs=89.9
Q ss_pred hHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCC
Q 016468 13 DEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNN 92 (389)
Q Consensus 13 ~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~ 92 (389)
.++|+.++.+++++|++.+++|+|++||.+ +|+.... .+. +...|+.+|..+|+++.+.
T Consensus 84 ~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~-~~~~~~~------~~~-----~~~~y~~~K~~~e~~~~~~--------- 142 (206)
T 1hdo_A 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAF-LLWDPTK------VPP-----RLQAVTDDHIRMHKVLRES--------- 142 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCEEEEECCGG-GTSCTTC------SCG-----GGHHHHHHHHHHHHHHHHT---------
T ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEeeee-eccCccc------ccc-----cchhHHHHHHHHHHHHHhC---------
Confidence 458999999999999999999999999998 5764321 111 2578999999999999653
Q ss_pred CCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCccee-cCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 93 RKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 93 ~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~-g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
+++++++||+.+ |++... +...... +.+. .+++|++|+|++++.+++ .+...
T Consensus 143 --~i~~~~lrp~~~-~~~~~~-----------~~~~~~~~~~~~--~~~i~~~Dva~~~~~~~~-----------~~~~~ 195 (206)
T 1hdo_A 143 --GLKYVAVMPPHI-GDQPLT-----------GAYTVTLDGRGP--SRVISKHDLGHFMLRCLT-----------TDEYD 195 (206)
T ss_dssp --CSEEEEECCSEE-ECCCCC-----------SCCEEESSSCSS--CSEEEHHHHHHHHHHTTS-----------CSTTT
T ss_pred --CCCEEEEeCCcc-cCCCCC-----------cceEecccCCCC--CCccCHHHHHHHHHHHhc-----------Ccccc
Confidence 599999999998 443321 0100011 1111 489999999999999987 44567
Q ss_pred CceEEEeCCC
Q 016468 172 GQPYFVSDGF 181 (389)
Q Consensus 172 g~~y~i~~~~ 181 (389)
|++|++++++
T Consensus 196 g~~~~i~~g~ 205 (206)
T 1hdo_A 196 GHSTYPSHQY 205 (206)
T ss_dssp TCEEEEECCC
T ss_pred ccceeeeccc
Confidence 8999999875
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-11 Score=112.08 Aligned_cols=113 Identities=14% Similarity=0.006 Sum_probs=86.0
Q ss_pred chhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPF 88 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~ 88 (389)
.+.++++|+.++.+++++|++.+++|+|++||.. +|+. + ...|+.||..+|++++...
T Consensus 101 ~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~-~~~~-------------~----~~~Y~~sK~~~e~~~~~~~---- 158 (242)
T 2bka_A 101 AEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG-ADKS-------------S----NFLYLQVKGEVEAKVEELK---- 158 (242)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT-CCTT-------------C----SSHHHHHHHHHHHHHHTTC----
T ss_pred cccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc-CCCC-------------C----cchHHHHHHHHHHHHHhcC----
Confidence 4678899999999999999999999999999988 4531 1 3689999999999998753
Q ss_pred CCCCCCCc-eEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 89 KKNNRKCL-YTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 89 ~~~~~~gl-~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+ +++++||+.||||...... ..+........+ ..++ ...++|++|+|++++.+++
T Consensus 159 -------~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~dva~~~~~~~~ 215 (242)
T 2bka_A 159 -------FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLP-DSWA----SGHSVPVVTVVRAMLNNVV 215 (242)
T ss_dssp -------CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCC-TTGG----GGTEEEHHHHHHHHHHHHT
T ss_pred -------CCCeEEEcCceecCCCCCCcHHHHHHHHhhcccC-cccc----CCcccCHHHHHHHHHHHHh
Confidence 6 6999999999999754332 233333332221 1111 2358999999999999986
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.17 E-value=4.6e-12 Score=115.95 Aligned_cols=161 Identities=15% Similarity=0.040 Sum_probs=102.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccC-C-------CCCCCCCC---CCCCCCCcHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIV-N-------GNESLPYF---PIDEHVDSYGR 71 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~-~-------~~E~~p~~---p~~~~~~~Y~~ 71 (389)
.+.+..+++|+.++.+++++|.+. +.+|+|++||..+ |++.... + .+|+.+.. ....+...|+.
T Consensus 77 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 155 (255)
T 2dkn_A 77 ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA-TQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAG 155 (255)
T ss_dssp SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG-GSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHH
T ss_pred hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc-ccccccccchhhhhcccchhhhhhhccccCCcchhHHH
Confidence 456789999999999999988765 6789999999984 5543111 0 01111000 00012578999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 72 SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
||+..|.+++.+.... ...+++++++||+.|+|+... ..+.....+....... + ...+++|++|+|++++
T Consensus 156 sK~a~~~~~~~~~~~~----~~~gi~v~~v~pg~v~~~~~~----~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~ 225 (255)
T 2dkn_A 156 SKYAVTCLARRNVVDW----AGRGVRLNVVAPGAVETPLLQ----ASKADPRYGESTRRFV-A-PLGRGSEPREVAEAIA 225 (255)
T ss_dssp HHHHHHHHHHHTHHHH----HHTTCEEEEEEECCBCSHHHH----HHHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH----hhcCcEEEEEcCCcccchhhh----hcccchhhHHHHHHHH-H-HhcCCCCHHHHHHHHH
Confidence 9999999998864210 114799999999999987432 1111000000000011 1 3457999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHH
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
.+++.- .....|+.|++.+|..++++|
T Consensus 226 ~l~~~~---------~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 226 FLLGPQ---------ASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHSGG---------GTTCCSCEEEESTTHHHHHCT
T ss_pred HHhCCC---------cccceeeEEEecCCeEeeeec
Confidence 998621 123568999999988766544
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.5e-10 Score=107.63 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=112.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++... +.+++|++||..+ |.+.+ .+...|+.||+..|.++..
T Consensus 116 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~--------------~~~~~Y~~sK~a~~~~~~~ 180 (278)
T 2bgk_A 116 EDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS-FTAGE--------------GVSHVYTATKHAVLGLTTS 180 (278)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG-TCCCT--------------TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc-cCCCC--------------CCCcchHHHHHHHHHHHHH
Confidence 345678999999999999999874 6779999999884 43211 0146899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|++++++||+.|+|+..... .+.....+.... +.....+++++|+|++++.++...
T Consensus 181 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~l~~~~-- 247 (278)
T 2bgk_A 181 LCTEL----GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA-------ANLKGTLLRAEDVADAVAYLAGDE-- 247 (278)
T ss_dssp HHHHH----GGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT-------CSSCSCCCCHHHHHHHHHHHHSGG--
T ss_pred HHHHH----hhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc-------cccccccCCHHHHHHHHHHHcCcc--
Confidence 64210 12579999999999999865432 133333332221 112245899999999999988521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTL 196 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~l 196 (389)
.....|+.|++.+|..+++.|+++.+.+.+
T Consensus 248 -------~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 248 -------SKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp -------GTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred -------cccCCCCEEEECCcccccCCccchhhhhhc
Confidence 234569999999999999999999886654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=7.4e-10 Score=101.41 Aligned_cols=141 Identities=18% Similarity=0.119 Sum_probs=101.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++. +.+.+++|++||..+ +.+ ..+ ...|+.||+..|.+++.
T Consensus 109 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 172 (255)
T 1fmc_A 109 ADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA-ENK-----------NIN----MTSYASSKAAASHLVRN 172 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TCC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh-cCC-----------CCC----CcccHHHHHHHHHHHHH
Confidence 3457788999999999999985 457889999999874 321 112 57899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...++++.++||+.|+++.... ..+.+...+..+.+. ..+.+++|+|++++.++...
T Consensus 173 ~~~~~----~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~---- 235 (255)
T 1fmc_A 173 MAFDL----GEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPI---------RRLGQPQDIANAALFLCSPA---- 235 (255)
T ss_dssp HHHHH----HTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSS---------CSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHh----hhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCc---------ccCCCHHHHHHHHHHHhCCc----
Confidence 64210 1258999999999999874332 234444444444321 24789999999999988520
Q ss_pred CCCCCCCCCCCceEEEeCCCCCCh
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|++|++.+|...|+
T Consensus 236 -----~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 236 -----ASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp -----GTTCCSCEEEESTTSCCCC
T ss_pred -----cccCCCcEEEECCceeccC
Confidence 1234689999999988775
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.1e-09 Score=99.66 Aligned_cols=139 Identities=16% Similarity=0.123 Sum_probs=98.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++.+. + .+++|++||..+ |.+. .+ ...|+.||+..|.+++
T Consensus 98 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~-----------~~----~~~Y~~sK~a~~~~~~ 161 (244)
T 1cyd_A 98 EAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA-HVTF-----------PN----LITYSSTKGAMTMLTK 161 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TSCC-----------TT----BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhh-cCCC-----------CC----cchhHHHHHHHHHHHH
Confidence 345678999999999999998764 5 679999999874 4321 11 4689999999999998
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.+.... ...++++.++||+.|+|+... ...+.++..+..+. ...+++|++|+|++++.++...
T Consensus 162 ~~a~~~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~-- 226 (244)
T 1cyd_A 162 AMAMEL----GPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH---------PLRKFAEVEDVVNSILFLLSDR-- 226 (244)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGG--
T ss_pred HHHHHh----hhcCeEEEEEecCcccCccccccccCHHHHHHHHhcC---------CccCCCCHHHHHHHHHHHhCch--
Confidence 764210 125799999999999987432 11233334333332 1257899999999999998621
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 227 -------~~~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 227 -------SASTSGGGILVDAGYLA 243 (244)
T ss_dssp -------GTTCCSSEEEESTTGGG
T ss_pred -------hhcccCCEEEECCCccC
Confidence 22456888888877543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.95 E-value=4.1e-10 Score=105.05 Aligned_cols=156 Identities=13% Similarity=0.024 Sum_probs=103.3
Q ss_pred CcchhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.| ++++++.+++.+.+++|++||..+.++ ..+ ...|+.||+..|.+++.
T Consensus 101 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~~ 164 (281)
T 3m1a_A 101 RELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS------------FAG----FSAYSATKAALEQLSEG 164 (281)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC------------CCC----chHHHHHHHHHHHHHHH
Confidence 3556788999999 666666667778889999999875221 112 57999999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|++++++||+.|+++... ...+.+......... +.......++.+++|+|++++.+++
T Consensus 165 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~a~~~~~~ 237 (281)
T 3m1a_A 165 LADEV----APFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ---LVQGSDGSQPGDPAKAAAAIRLALD 237 (281)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH---HHHC-----CBCHHHHHHHHHHHHH
T ss_pred HHHHh----hccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH---HHhhccCCCCCCHHHHHHHHHHHHh
Confidence 65211 125899999999999876421 111222222211111 1112233568889999999999997
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 197 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg 197 (389)
.+ ..+..|+++++......+....+.+.++
T Consensus 238 -----------~~-~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 238 -----------TE-KTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp -----------SS-SCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred -----------CC-CCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 33 3466899998877777777777776654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.8e-10 Score=99.35 Aligned_cols=111 Identities=10% Similarity=-0.016 Sum_probs=85.6
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+.+..+++|+.++.+++++|++.+.+++|++||..+ |.+ ..+ ...|+.||+..|.+++.+..
T Consensus 87 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~~~~ 150 (207)
T 2yut_A 87 RDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPR-YVQ-----------VPG----FAAYAAAKGALEAYLEAARK 150 (207)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHH-HHS-----------STT----BHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhh-ccC-----------CCC----cchHHHHHHHHHHHHHHHHH
Confidence 34667889999999999999997778889999999884 421 111 57899999999999887642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.. ...|++++++||+.++++... +++....++++++|+|++++.+++
T Consensus 151 ~~----~~~gi~v~~v~pg~v~t~~~~-------------------~~~~~~~~~~~~~dva~~~~~~~~ 197 (207)
T 2yut_A 151 EL----LREGVHLVLVRLPAVATGLWA-------------------PLGGPPKGALSPEEAARKVLEGLF 197 (207)
T ss_dssp HH----HTTTCEEEEECCCCBCSGGGG-------------------GGTSCCTTCBCHHHHHHHHHHHHC
T ss_pred HH----hhhCCEEEEEecCcccCCCcc-------------------ccCCCCCCCCCHHHHHHHHHHHHh
Confidence 10 125899999999999987411 122334689999999999999986
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=98.92 E-value=1.4e-08 Score=92.19 Aligned_cols=123 Identities=11% Similarity=-0.029 Sum_probs=78.6
Q ss_pred hHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCce
Q 016468 18 NGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLY 97 (389)
Q Consensus 18 ~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~ 97 (389)
..+++++++|++.+++|||++||.. +|++.+.....++... ...+...|..+|+.+.. .+++
T Consensus 103 ~~~~~~~~~~~~~~~~~iV~iSS~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~-----------~gi~ 164 (236)
T 3qvo_A 103 IQANSVIAAMKACDVKRLIFVLSLG-IYDEVPGKFVEWNNAV------IGEPLKPFRRAADAIEA-----------SGLE 164 (236)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCC-C----------------------CGGGHHHHHHHHHHHT-----------SCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEEecce-ecCCCCcccccchhhc------ccchHHHHHHHHHHHHH-----------CCCC
Confidence 4588999999999999999999998 5776543322221111 13444556667777653 4699
Q ss_pred EEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCC-ccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEE
Q 016468 98 TCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPS-VKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYF 176 (389)
Q Consensus 98 ~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~-~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~ 176 (389)
++++||+.++++..... .....+. ....+++++|+|++++.++.. .....|+.|+
T Consensus 165 ~~~vrPg~i~~~~~~~~--------------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~----------~~~~~g~~~~ 220 (236)
T 3qvo_A 165 YTILRPAWLTDEDIIDY--------------ELTSRNEPFKGTIVSRKSVAALITDIIDK----------PEKHIGENIG 220 (236)
T ss_dssp EEEEEECEEECCSCCCC--------------EEECTTSCCSCSEEEHHHHHHHHHHHHHS----------TTTTTTEEEE
T ss_pred EEEEeCCcccCCCCcce--------------EEeccCCCCCCcEECHHHHHHHHHHHHcC----------cccccCeeEE
Confidence 99999999999754321 1111111 123589999999999999972 2225689999
Q ss_pred EeCCCC
Q 016468 177 VSDGFP 182 (389)
Q Consensus 177 i~~~~~ 182 (389)
+++++.
T Consensus 221 i~~~~~ 226 (236)
T 3qvo_A 221 INQPGT 226 (236)
T ss_dssp EECSSC
T ss_pred ecCCCC
Confidence 998753
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-09 Score=98.01 Aligned_cols=138 Identities=16% Similarity=0.118 Sum_probs=99.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCC----------CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGI----------QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gv----------krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+.+..+++|+.++.+++++|.+... .++|++||..+ +.+. .+ ...|+.||+..|
T Consensus 93 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~-----------~~----~~~Y~~sK~a~~ 156 (242)
T 1uay_A 93 SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA-FEGQ-----------IG----QAAYAASKGGVV 156 (242)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH-HHCC-----------TT----CHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh-ccCC-----------CC----CchhhHHHHHHH
Confidence 5678899999999999999986521 28999999885 3321 11 478999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+++.+.... ...|++++++||+.|+++........+...+..+.+. . ..+++++|+|++++.++.
T Consensus 157 ~~~~~l~~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~dva~~~~~l~~-- 222 (242)
T 1uay_A 157 ALTLPAAREL----AGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF--P------PRLGRPEEYAALVLHILE-- 222 (242)
T ss_dssp HHHHHHHHHH----GGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS--S------CSCCCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHH----hhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCC--c------ccCCCHHHHHHHHHHHhc--
Confidence 8887754210 1247999999999999875433334444444433221 0 247899999999999987
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.|++.+|..++
T Consensus 223 ---------~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 223 ---------NPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp ---------CTTCCSCEEEESTTCCCC
T ss_pred ---------CCCCCCcEEEEcCCeecC
Confidence 345679999998887654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=2.9e-09 Score=97.98 Aligned_cols=143 Identities=16% Similarity=0.131 Sum_probs=93.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++.+. + .+++|++||..+.++. .+ ...|+.||+..|.++.
T Consensus 114 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~ 177 (264)
T 2pd6_A 114 DDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN------------VG----QTNYAASKAGVIGLTQ 177 (264)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC------------TT----BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC------------CC----ChhhHHHHHHHHHHHH
Confidence 356778999999999999998764 4 5699999998754331 11 4789999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...|++++++||+.|+++......+.+...+..+. ....+.+++|+|++++.++...
T Consensus 178 ~la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~---- 240 (264)
T 2pd6_A 178 TAAREL----GRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMI---------PMGHLGDPEDVADVVAFLASED---- 240 (264)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCSCC----------CTGGGC---------TTCSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHHh----hhcCeEEEEEeeecccccchhhcCHHHHHHHHHhC---------CCCCCCCHHHHHHHHHHHcCCc----
Confidence 764210 12579999999999999865432222211111111 1134789999999999888521
Q ss_pred CCCCCCCCCCCceEEEeCCCCCChHH
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
.....|+.+++.+|..++...
T Consensus 241 -----~~~~~G~~~~v~gg~~~~~~~ 261 (264)
T 2pd6_A 241 -----SGYITGTSVEVTGGLFMAENL 261 (264)
T ss_dssp -----GTTCCSCEEEESTTC------
T ss_pred -----ccCCCCCEEEECCCceecccc
Confidence 234578999999887665443
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.87 E-value=8e-09 Score=95.42 Aligned_cols=137 Identities=17% Similarity=0.090 Sum_probs=98.8
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+ +.. .+..+ ...|+.||+..|.+.+.
T Consensus 118 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~-~~~---------~~~~~----~~~Y~~sKaa~~~l~~~ 183 (260)
T 3un1_A 118 EDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLV-DQP---------MVGMP----SALASLTKGGLNAVTRS 183 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTT-TSC---------BTTCC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhh-ccC---------CCCCc----cHHHHHHHHHHHHHHHH
Confidence 356778899999999999998 4667889999999773 221 11122 57899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|++|...... ........ ....+.+++|+|++++.+.+
T Consensus 184 la~e~----~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~---------p~~r~~~~~dva~av~~L~~------- 240 (260)
T 3un1_A 184 LAMEF----SRSGVRVNAVSPGVIKTPMHPAET---HSTLAGLH---------PVGRMGEIRDVVDAVLYLEH------- 240 (260)
T ss_dssp HHHHT----TTTTEEEEEEEECCBCCTTSCGGG---HHHHHTTS---------TTSSCBCHHHHHHHHHHHHH-------
T ss_pred HHHHh----CcCCeEEEEEeecCCCCCCCCHHH---HHHHhccC---------CCCCCcCHHHHHHHHHHhcc-------
Confidence 65321 235899999999999998654211 12222221 22357789999999998854
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+++++.+|..++
T Consensus 241 ----~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 241 ----AGFITGEILHVDGGQNAG 258 (260)
T ss_dssp ----CTTCCSCEEEESTTGGGC
T ss_pred ----cCCCCCcEEEECCCeecc
Confidence 556789999998886543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.6e-09 Score=94.36 Aligned_cols=118 Identities=7% Similarity=-0.016 Sum_probs=88.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.+++++|.+. + +++|++||..+ +.+ ..+ ...|+.||...|.+++.+.
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~~~~~~~~~~~ 143 (202)
T 3d7l_A 81 KNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMM-EDP-----------IVQ----GASAAMANGAVTAFAKSAA 143 (202)
T ss_dssp HHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhh-cCC-----------CCc----cHHHHHHHHHHHHHHHHHH
Confidence 34567789999999999999887 4 69999999764 221 111 4789999999999999986
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
... ..+++++++||+.++++... . ++.....++++++|+|++++.+++
T Consensus 144 ~e~-----~~gi~v~~v~pg~v~~~~~~---------~---------~~~~~~~~~~~~~dva~~~~~~~~--------- 191 (202)
T 3d7l_A 144 IEM-----PRGIRINTVSPNVLEESWDK---------L---------EPFFEGFLPVPAAKVARAFEKSVF--------- 191 (202)
T ss_dssp TSC-----STTCEEEEEEECCBGGGHHH---------H---------GGGSTTCCCBCHHHHHHHHHHHHH---------
T ss_pred HHc-----cCCeEEEEEecCccCCchhh---------h---------hhhccccCCCCHHHHHHHHHHhhh---------
Confidence 421 25899999999999987321 0 112234678999999999988874
Q ss_pred CCCCCCCCceEEE
Q 016468 165 KGRPIASGQPYFV 177 (389)
Q Consensus 165 ~~~~~~~g~~y~i 177 (389)
. ...|+.|++
T Consensus 192 --~-~~~G~~~~v 201 (202)
T 3d7l_A 192 --G-AQTGESYQV 201 (202)
T ss_dssp --S-CCCSCEEEE
T ss_pred --c-cccCceEec
Confidence 2 345788876
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.7e-09 Score=94.11 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=84.3
Q ss_pred hhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCC-cHHHHHHHHHHHHHHhCCCCCCCCCCC
Q 016468 16 NINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVD-SYGRSKSVAEQLVLKSNGRPFKKNNRK 94 (389)
Q Consensus 16 Nv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~-~Y~~SK~~aE~~l~~~~~~~~~~~~~~ 94 (389)
|+. +++++++|++.+++|+|++||.. +|++.+.....+..+ ... .|+.+|..+|+++.+.
T Consensus 85 n~~-~~~~~~~~~~~~~~~iv~iSs~~-~~~~~~~~~~~~~~~------~~~~~y~~~K~~~e~~~~~~----------- 145 (221)
T 3r6d_A 85 GSD-MASIVKALSRXNIRRVIGVSMAG-LSGEFPVALEKWTFD------NLPISYVQGERQARNVLRES----------- 145 (221)
T ss_dssp HHH-HHHHHHHHHHTTCCEEEEEEETT-TTSCSCHHHHHHHHH------TSCHHHHHHHHHHHHHHHHS-----------
T ss_pred Chh-HHHHHHHHHhcCCCeEEEEeece-ecCCCCccccccccc------ccccHHHHHHHHHHHHHHhC-----------
Confidence 556 99999999999999999999998 465432110001111 023 8999999999998753
Q ss_pred CceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH--hcccCCCCCCCCCCCCCC
Q 016468 95 CLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS--MGLLDDIPGQKGRPIASG 172 (389)
Q Consensus 95 gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~--~~l~~~~~~~~~~~~~~g 172 (389)
+++++++||+.|+++.... ..............+++.+|+|++++.++ .. .....+
T Consensus 146 ~i~~~~vrpg~v~~~~~~~------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~----------~~~~~~ 203 (221)
T 3r6d_A 146 NLNYTILRLTWLYNDPEXT------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAAD----------ETPFHR 203 (221)
T ss_dssp CSEEEEEEECEEECCTTCC------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSC----------CGGGTT
T ss_pred CCCEEEEechhhcCCCCCc------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcC----------hhhhhc
Confidence 5999999999999983321 11111111111224899999999999999 51 223457
Q ss_pred ceEEEeCCC
Q 016468 173 QPYFVSDGF 181 (389)
Q Consensus 173 ~~y~i~~~~ 181 (389)
+.+.++++.
T Consensus 204 ~~~~i~~~~ 212 (221)
T 3r6d_A 204 TSIGVGEPG 212 (221)
T ss_dssp EEEEEECTT
T ss_pred ceeeecCCC
Confidence 778887543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.85 E-value=4.2e-09 Score=97.99 Aligned_cols=152 Identities=9% Similarity=0.006 Sum_probs=94.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++... + +++|++||..+.+.+ ..+ ...|+.||+..|.+.+.
T Consensus 112 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 175 (278)
T 1spx_A 112 ESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA-----------TPD----FPYYSIAKAAIDQYTRN 175 (278)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC-----------CTT----SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC-----------CCC----ccHHHHHHHHHHHHHHH
Confidence 456778999999999999998764 6 799999998731211 111 46899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHH------HHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRI------VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~l------i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
+.... .+.|+++.++||+.|+++..... .+.. ...+.... ....+.+.+|+|++++.+
T Consensus 176 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~v~~l 242 (278)
T 1spx_A 176 TAIDL----IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV---------PAGVMGQPQDIAEVIAFL 242 (278)
T ss_dssp HHHHH----GGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHC---------TTSSCBCHHHHHHHHHHH
T ss_pred HHHHH----HhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC---------CCcCCCCHHHHHHHHHHH
Confidence 64210 12589999999999998753321 0111 12221111 012478999999999988
Q ss_pred HhcccCCCCCCCCCCC-CCCceEEEeCCCCCChHHHHHHHHHhC
Q 016468 154 SMGLLDDIPGQKGRPI-ASGQPYFVSDGFPINTFEFIGPLLKTL 196 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~-~~g~~y~i~~~~~~s~~e~~~~l~~~l 196 (389)
+... ... ..|+.+++.+|..+++.|+++.+.+.+
T Consensus 243 ~s~~---------~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 243 ADRK---------TSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HCHH---------HHTTCCSCEEEESTTGGGC------------
T ss_pred cCcc---------ccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 7510 112 569999999999999999999887654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.3e-08 Score=91.66 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=96.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++.. .+..++|++||..+ +.+ .+..| ...|+.||+..|.++..+
T Consensus 114 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~---------~~~~~----~~~Y~~sK~a~~~~~~~l 179 (260)
T 3awd_A 114 QWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSG-LIV---------NRPQQ----QAAYNASKAGVHQYIRSL 179 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSC---------CSSSC----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchh-ccc---------CCCCC----ccccHHHHHHHHHHHHHH
Confidence 3467889999999999999875 46789999999774 211 11111 378999999999999876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC-CC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|++++++||+.|+++... .. .+.+...+..+.+ ...+++++|+|++++.++...
T Consensus 180 ~~e~----~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~---- 242 (260)
T 3awd_A 180 AAEW----APHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP---------MGRVGQPDEVASVVQFLASDA---- 242 (260)
T ss_dssp HHHH----GGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHh----hhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC---------cCCCCCHHHHHHHHHHHhCch----
Confidence 4210 125799999999999998654 11 1233343333321 134789999999999888521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 243 -----~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 243 -----ASLMTGAIVNVDAGF 257 (260)
T ss_dssp -----GTTCCSCEEEESTTT
T ss_pred -----hccCCCcEEEECCce
Confidence 234568899998875
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=98.79 E-value=6.4e-09 Score=94.52 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=92.8
Q ss_pred CcchhhhHhhhhHHHH----HHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCH----VIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~n----ll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.+ +++.+++.+.+|+|++||..++++.. + ...|+.||+..|.+.+.
T Consensus 102 ~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~----~~~Y~~sK~a~~~~~~~ 165 (245)
T 2ph3_A 102 EDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP------------G----QANYVASKAGLIGFTRA 165 (245)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS------------S----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC------------C----CcchHHHHHHHHHHHHH
Confidence 3456788999999554 45555567888999999987544321 1 46899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...+++++++||+.++++......+.....+..+.+ ...+++++|+|++++.++...
T Consensus 166 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~----- 227 (245)
T 2ph3_A 166 VAKEY----AQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIP---------AGRFGRPEEVAEAVAFLVSEK----- 227 (245)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCT---------TCSCBCHHHHHHHHHHHTSGG-----
T ss_pred HHHHH----HHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcc-----
Confidence 64210 124799999999999987433222333333332221 135789999999999887520
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 228 ----~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 228 ----AGYITGQTLCVDGGL 242 (245)
T ss_dssp ----GTTCCSCEEEESTTC
T ss_pred ----cccccCCEEEECCCC
Confidence 223468999988764
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=7.7e-09 Score=94.14 Aligned_cols=136 Identities=16% Similarity=0.126 Sum_probs=93.8
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++ ++.+.+++|++||..++++. + + ...|+.||+..|.+...+
T Consensus 108 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~--~----~~~Y~~sK~a~~~~~~~l 171 (248)
T 2pnf_A 108 DWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN----------V--G----QVNYSTTKAGLIGFTKSL 171 (248)
T ss_dssp HHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC----------T--T----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC----------C--C----CchHHHHHHHHHHHHHHH
Confidence 45678999999996666655 45678899999998754432 1 1 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...+++++++||+.++++.................+ ...+++++|+++++..++...
T Consensus 172 a~e~----~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~------ 232 (248)
T 2pnf_A 172 AKEL----APRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIP---------LGRFGSPEEVANVVLFLCSEL------ 232 (248)
T ss_dssp HHHH----GGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT---------TSSCBCHHHHHHHHHHHHSGG------
T ss_pred HHHh----cccCeEEEEEEeceecCchhhhccHHHHHHHHhcCC---------CCCccCHHHHHHHHHHHhCch------
Confidence 4210 125799999999999988544322333333322211 135889999999999988521
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 233 ---~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 233 ---ASYITGEVIHVNGGM 247 (248)
T ss_dssp ---GTTCCSCEEEESTTC
T ss_pred ---hhcCCCcEEEeCCCc
Confidence 224568999988763
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=3.9e-09 Score=99.26 Aligned_cols=153 Identities=13% Similarity=0.012 Sum_probs=104.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||..+..+ ..+ ...|+.||+..|.+++
T Consensus 126 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~ 189 (302)
T 1w6u_A 126 NAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG------------SGF----VVPSASAKAGVEAMSK 189 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC------------CCC----cchhHHHHHHHHHHHH
Confidence 35677899999999999998864 34579999999875322 111 4789999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC-CCHH--HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLP--RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~--~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.+.... ...|++++++||+.|++++.. ...+ .....+..+.+ ...+.+++|+|++++.++...
T Consensus 190 ~la~~~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dva~~~~~l~~~~- 255 (302)
T 1w6u_A 190 SLAAEW----GKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP---------CGRLGTVEELANLAAFLCSDY- 255 (302)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHTSGG-
T ss_pred HHHHHh----hhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC---------cCCCCCHHHHHHHHHHHcCCc-
Confidence 765210 125899999999999987422 1111 11122222221 124789999999999887521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLD 197 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg 197 (389)
.....|+.|++.+|..+++.|+++.+.+..|
T Consensus 256 --------~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 256 --------ASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp --------GTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred --------ccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 2234689999999988888888777766654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=3e-08 Score=90.54 Aligned_cols=137 Identities=13% Similarity=0.118 Sum_probs=101.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+.++. .+ ...|+.||+..|.+.+.
T Consensus 104 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~~ 167 (246)
T 3osu_A 104 QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN------------PG----QANYVATKAGVIGLTKS 167 (246)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC------------CC----ChHHHHHHHHHHHHHHH
Confidence 355678999999999999999 55677899999998754331 11 47899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|+++......+.....+..+.+. ..+.+.+|+++++..++...
T Consensus 168 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~---------~r~~~~~dva~~v~~l~s~~----- 229 (246)
T 3osu_A 168 AAREL----ASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPL---------ARFGQDTDIANTVAFLASDK----- 229 (246)
T ss_dssp HHHHH----GGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHTSGG-----
T ss_pred HHHHh----cccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc-----
Confidence 64211 1358999999999999987665556666655544432 24677899999999887521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 230 ----~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 230 ----AKYITGQTIHVNGGM 244 (246)
T ss_dssp ----GTTCCSCEEEESTTS
T ss_pred ----ccCCCCCEEEeCCCc
Confidence 234569999998874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=98.76 E-value=1e-08 Score=93.17 Aligned_cols=138 Identities=12% Similarity=0.096 Sum_probs=95.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.+ .+.+|+|++||..+.++. + + ...|+.||+..|.+.+.
T Consensus 101 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~--~----~~~Y~~sK~a~~~~~~~ 164 (244)
T 1edo_A 101 SQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN----------I--G----QANYAAAKAGVIGFSKT 164 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T--T----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----------C--C----CccchhhHHHHHHHHHH
Confidence 34567899999999999999876 367899999998754431 1 1 47899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...+++++++||+.|+++......+..........+ ...+++.+|+|+++..++...
T Consensus 165 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~----- 226 (244)
T 1edo_A 165 AAREG----ASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIP---------LGRTGQPENVAGLVEFLALSP----- 226 (244)
T ss_dssp HHHHH----HTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCT---------TCSCBCHHHHHHHHHHHHHCS-----
T ss_pred HHHHh----hhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCC---------CCCCCCHHHHHHHHHHHhCCC-----
Confidence 54210 125899999999999987433222333333322211 124789999999999888410
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
......|+.|++.+|.
T Consensus 227 ---~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 227 ---AASYITGQAFTIDGGI 242 (244)
T ss_dssp ---GGGGCCSCEEEESTTT
T ss_pred ---ccCCcCCCEEEeCCCc
Confidence 0223468999988774
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.75 E-value=8.1e-09 Score=95.46 Aligned_cols=136 Identities=18% Similarity=0.129 Sum_probs=93.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++++++.+. + +++|++||..+.+.+. + + ...|+.||+..|.+++.+.
T Consensus 122 ~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~---------~--~----~~~Y~~sK~a~~~~~~~~~ 185 (274)
T 1ja9_A 122 LFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI---------P--N----HALYAGSKAAVEGFCRAFA 185 (274)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC---------C--S----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC---------C--C----CchHHHHHHHHHHHHHHHH
Confidence 45678999999999999999875 5 6999999988521221 1 1 4689999999999988764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------------CCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------------RHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
... ...+++++++||+.|+++... ... ......... +....++++++|+|++++
T Consensus 186 ~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i~ 252 (274)
T 1ja9_A 186 VDC----GAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN---------MNPLKRIGYPADIGRAVS 252 (274)
T ss_dssp HHH----GGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH---------TSTTSSCBCHHHHHHHHH
T ss_pred HHh----hhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh---------cCCCCCccCHHHHHHHHH
Confidence 210 124799999999999876321 011 122222222 122346899999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.++... .....|+.|++.+|.
T Consensus 253 ~l~~~~---------~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 253 ALCQEE---------SEWINGQVIKLTGGG 273 (274)
T ss_dssp HHHSGG---------GTTCCSCEEEESTTC
T ss_pred HHhCcc---------cccccCcEEEecCCc
Confidence 988520 223468999998763
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.9e-08 Score=91.50 Aligned_cols=137 Identities=18% Similarity=0.133 Sum_probs=95.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++.+. + .+++|++||..+ +.+ ..+ ...|+.||+..|.+++.
T Consensus 99 ~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 162 (244)
T 3d3w_A 99 AFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS-QRA-----------VTN----HSVYCSTKGALDMLTKV 162 (244)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhh-ccC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 45778999999999999988764 5 679999999874 321 111 47899999999999987
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...++++.++||+.|+++.... ..+.....+..+. ....+++++|+|++++.++...
T Consensus 163 la~e~----~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~--- 226 (244)
T 3d3w_A 163 MALEL----GPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI---------PLGKFAEVEHVVNAILFLLSDR--- 226 (244)
T ss_dssp HHHHH----GGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGG---
T ss_pred HHHHh----cccCeEEEEEEeccccccchhhhccChHHHHHHHhhC---------CCCCCcCHHHHHHHHHHHcCcc---
Confidence 64210 1257999999999999874321 0011222222221 1236899999999999988621
Q ss_pred CCCCCCCCCCCCceEEEeCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.|++.+|..
T Consensus 227 ------~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 227 ------SGMTTGSTLPVEGGFW 242 (244)
T ss_dssp ------GTTCCSCEEEESTTGG
T ss_pred ------ccCCCCCEEEECCCcc
Confidence 2235789999988754
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.6e-08 Score=92.08 Aligned_cols=137 Identities=12% Similarity=0.099 Sum_probs=90.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.. .+.+++|++||..++++.. + ...|+.||+..|.+++.
T Consensus 105 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~----~~~Y~~sK~a~~~~~~~ 168 (247)
T 2hq1_A 105 KDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------G----QANYAASKAGLIGFTKS 168 (247)
T ss_dssp --CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------C----CcHhHHHHHHHHHHHHH
Confidence 45678899999999998888764 5778999999986555421 1 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...++++.+++|+.+.++...............+. ....+++++|+++++..++...
T Consensus 169 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~----- 230 (247)
T 2hq1_A 169 IAKEF----AAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI---------PLKRFGTPEEVANVVGFLASDD----- 230 (247)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhC---------CCCCCCCHHHHHHHHHHHcCcc-----
Confidence 64211 12479999999999976532221122223232221 1235889999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 231 ----~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 231 ----SNYITGQVINIDGGL 245 (247)
T ss_dssp ----GTTCCSCEEEESTTC
T ss_pred ----cccccCcEEEeCCCc
Confidence 223468999998875
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.2e-08 Score=94.14 Aligned_cols=139 Identities=15% Similarity=0.125 Sum_probs=84.1
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++ ++.+.+++|++||..+ +.+. .+ ...|+.||+..|.+++.
T Consensus 114 ~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~-----------~~----~~~Y~~sK~a~~~~~~~ 177 (266)
T 1xq1_A 114 EDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG-VVSA-----------SV----GSIYSATKGALNQLARN 177 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh-ccCC-----------CC----CchHHHHHHHHHHHHHH
Confidence 355678899999999999999 4567889999999875 3211 11 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|++++++||+.|+++...... +.+...+... .....+++++|++++++.++...
T Consensus 178 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~---- 240 (266)
T 1xq1_A 178 LACEW----ASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISR---------KPLGRFGEPEEVSSLVAFLCMPA---- 240 (266)
T ss_dssp HHHHH----GGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGG----
T ss_pred HHHHH----hHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCcc----
Confidence 64210 124799999999999998654221 1111111111 11124789999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 241 -----~~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 241 -----ASYITGQTICVDGGLTV 257 (266)
T ss_dssp -----GTTCCSCEEECCCCEEE
T ss_pred -----ccCccCcEEEEcCCccc
Confidence 22346899999888643
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.71 E-value=8.7e-09 Score=96.12 Aligned_cols=154 Identities=17% Similarity=0.136 Sum_probs=108.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++... +-.++|++||..+ +.+. .+ ...|+.||+..|.+.+.+
T Consensus 115 ~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~-----------~~----~~~Y~asK~a~~~l~~~l 178 (281)
T 3svt_A 115 AWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA-SNTH-----------RW----FGAYGVTKSAVDHLMQLA 178 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH-HSCC-----------TT----CTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH-cCCC-----------CC----ChhHHHHHHHHHHHHHHH
Confidence 45678999999999999998764 3349999999885 3211 11 478999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...++++.+++|+.|+++..... .+..........+ ...+.+++|+|++++.++...
T Consensus 179 a~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~~~~l~s~~---- 241 (281)
T 3svt_A 179 ADEL----GASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP---------LPRQGEVEDVANMAMFLLSDA---- 241 (281)
T ss_dssp HHHH----GGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS---------SSSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHh----hhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcc----
Confidence 4311 12579999999999988743210 1222222322222 124678999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCCCCC-hHHHHHHHHHhCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPIN-TFEFIGPLLKTLDYD 199 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s-~~e~~~~l~~~lg~~ 199 (389)
.....|+.+++.+|..++ ..|+.+.+.+.+|.+
T Consensus 242 -----~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 242 -----ASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp -----GTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred -----cCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 234579999999998877 778888888888765
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2e-09 Score=99.23 Aligned_cols=148 Identities=14% Similarity=0.110 Sum_probs=99.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... + -.++|++||..+.++. .+ ...|+.||+..|.+.+
T Consensus 104 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asK~a~~~~~~ 167 (259)
T 4e6p_A 104 ESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE------------AL----VAIYCATKAAVISLTQ 167 (259)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TT----BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC------------CC----ChHHHHHHHHHHHHHH
Confidence 455778889999999999998754 2 4589999998753221 11 4789999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCC---CcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGL---VPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~---~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.+.... ...|+++.+++|+.|++|.... ...++....... .....++......+.+++|+|++++.++...
T Consensus 168 ~la~e~----~~~gi~vn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~- 241 (259)
T 4e6p_A 168 SAGLDL----IKHRINVNAIAPGVVDGEHWDG-VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAE- 241 (259)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBCSTTHHH-HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGG-
T ss_pred HHHHHh----hhcCCEEEEEEECCCccchhhh-hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc-
Confidence 765211 1258999999999999875431 112222222111 1111233344567899999999998876410
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.|++.+|..+|
T Consensus 242 --------~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 242 --------SDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp --------GTTCCSCEEEESTTSSCC
T ss_pred --------cCCCCCCEEEECcChhcC
Confidence 334579999999987654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.6e-08 Score=93.02 Aligned_cols=144 Identities=15% Similarity=0.122 Sum_probs=98.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.++.++++++... + .+++|++||..+.++.... ..+..+ ...|+.||+..|.+++.
T Consensus 115 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-----~~~~~~----~~~Y~~sK~a~~~~~~~ 185 (265)
T 1h5q_A 115 DFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-----LNGSLT----QVFYNSSKAACSNLVKG 185 (265)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-----TTEECS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-----cccccc----ccccHHHHHHHHHHHHH
Confidence 45677899999999999998654 3 4799999998753332111 111122 57899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... .+.|++++++||+.|+++......+..........+ ...+++.+|+|++++.++...
T Consensus 186 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~----- 247 (265)
T 1h5q_A 186 LAAEW----ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP---------LNRFAQPEEMTGQAILLLSDH----- 247 (265)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGG-----
T ss_pred HHHHH----HhcCcEEEEEecCccccccccccchhHHHHHHhcCc---------ccCCCCHHHHHHHHHhhccCc-----
Confidence 64210 124799999999999988544333333333332221 124789999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.|++.+|..
T Consensus 248 ----~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 248 ----ATYMTGGEYFIDGGQL 263 (265)
T ss_dssp ----GTTCCSCEEEECTTGG
T ss_pred ----hhcCcCcEEEecCCEe
Confidence 2235789999988864
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=5.2e-08 Score=89.73 Aligned_cols=144 Identities=9% Similarity=0.035 Sum_probs=99.3
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+ ++. .+..+ ...|+.||+..|.+++.
T Consensus 109 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~---------~~~~~----~~~Y~asKaa~~~~~~~ 174 (264)
T 3i4f_A 109 DEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGA-DSA---------PGWIY----RSAFAAAKVGLVSLTKT 174 (264)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTG-GGC---------CCCTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechh-ccc---------CCCCC----CchhHHHHHHHHHHHHH
Confidence 345778999999999999999 5667789999999853 211 11112 57899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|+++......+.......... ....+.+.+|+|++++.++...
T Consensus 175 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~v~~l~s~~----- 236 (264)
T 3i4f_A 175 VAYEE----AEYGITANMVCPGDIIGEMKEATIQEARQLKEHNT---------PIGRSGTGEDIARTISFLCEDD----- 236 (264)
T ss_dssp HHHHH----GGGTEEEEEEEECCCCGGGGSCCHHHHHHC-----------------CCCCHHHHHHHHHHHHSGG-----
T ss_pred HHHHh----hhcCcEEEEEccCCccCccchhccHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHcCcc-----
Confidence 64211 22589999999999999876655544333222211 1234688999999999888621
Q ss_pred CCCCCCCCCCceEEEeCCCCCChH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTF 186 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~ 186 (389)
.....|+++++.+|-.....
T Consensus 237 ----~~~itG~~i~vdGG~~~~~~ 256 (264)
T 3i4f_A 237 ----SDMITGTIIEVTGAVDVIHR 256 (264)
T ss_dssp ----GTTCCSCEEEESCSCCCCC-
T ss_pred ----cCCCCCcEEEEcCceeeccC
Confidence 23457999999988665543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.8e-08 Score=91.63 Aligned_cols=141 Identities=9% Similarity=0.064 Sum_probs=96.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++. +.+.+++|++||..+ +.+. .+ ...|+.||+..|.+.+.
T Consensus 107 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~-----------~~----~~~Y~~sK~a~~~~~~~ 170 (263)
T 3ai3_A 107 EKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICA-VQPL-----------WY----EPIYNVTKAALMMFSKT 170 (263)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSCC-----------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh-cCCC-----------CC----cchHHHHHHHHHHHHHH
Confidence 3556788999999999999885 357789999999884 3321 11 46899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-----------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+.... .+.|+++.++||+.|++|...... +.....+.... .....+.+++|+|++++
T Consensus 171 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~p~~~~~~~~dvA~~~~ 238 (263)
T 3ai3_A 171 LATEV----IKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH--------APIKRFASPEELANFFV 238 (263)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH--------CTTCSCBCHHHHHHHHH
T ss_pred HHHHh----hhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC--------CCCCCCcCHHHHHHHHH
Confidence 64210 125899999999999987432111 11111111110 11235899999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.++.. ......|+.|++.+|...+
T Consensus 239 ~l~s~---------~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 239 FLCSE---------RATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHTST---------TCTTCCSCEEEESTTCCCC
T ss_pred HHcCc---------cccCCCCcEEEECCCcccc
Confidence 88751 0233568999999887655
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=2.7e-08 Score=90.95 Aligned_cols=138 Identities=14% Similarity=0.060 Sum_probs=92.7
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++ ++.+.+++|++||..+ +.+. +..| ...|+.||+..|.+++.+
T Consensus 108 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~---------~~~~----~~~Y~~sK~a~~~~~~~~ 173 (254)
T 2wsb_A 108 TWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSG-TIVN---------RPQF----ASSYMASKGAVHQLTRAL 173 (254)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSCC---------SSSC----BHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchh-ccCC---------CCCc----chHHHHHHHHHHHHHHHH
Confidence 34678889999977777766 4557889999999874 3221 1111 378999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|++++++||+.|+++..... .+.....+....+ ...+++++|+|++++.++...
T Consensus 174 ~~~~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~---- 236 (254)
T 2wsb_A 174 AAEW----AGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP---------MGRCGEPSEIAAAALFLASPA---- 236 (254)
T ss_dssp HHHH----GGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHH----hhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCcc----
Confidence 4210 12479999999999998743210 1223333332221 135789999999999988521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 237 -----~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 237 -----ASYVTGAILAVDGGY 251 (254)
T ss_dssp -----GTTCCSCEEEESTTG
T ss_pred -----cccccCCEEEECCCE
Confidence 234568899887764
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.66 E-value=6.7e-08 Score=90.25 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=93.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+.+++|++||..+.++. + + ...|+.||+..|.+++.
T Consensus 143 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~--~----~~~Y~asK~a~~~~~~~ 206 (285)
T 2c07_A 143 DEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------V--G----QANYSSSKAGVIGFTKS 206 (285)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T--T----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------C--C----CchHHHHHHHHHHHHHH
Confidence 3567789999999888888876 4577899999998754431 1 1 46899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|++++++||+.|+++......+..........+ ...+++++|+|++++.++...
T Consensus 207 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~~~----- 268 (285)
T 2c07_A 207 LAKEL----ASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIP---------AGRMGTPEEVANLACFLSSDK----- 268 (285)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCT---------TSSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCC---------CCCCCCHHHHHHHHHHHhCCC-----
Confidence 64210 125799999999999987544333333333332211 124789999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 269 ----~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 269 ----SGYINGRVFVIDGGL 283 (285)
T ss_dssp ----GTTCCSCEEEESTTS
T ss_pred ----cCCCCCCEEEeCCCc
Confidence 223578899988774
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.66 E-value=8.4e-08 Score=87.36 Aligned_cols=137 Identities=17% Similarity=0.136 Sum_probs=94.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++. +.+.+++|++||..+.++ . .+ ...|+.||+..|.+++.
T Consensus 105 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-~-----------~~----~~~Y~~sK~a~~~~~~~ 168 (250)
T 2cfc_A 105 EQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-F-----------PG----RSAYTTSKGAVLQLTKS 168 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-C-----------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-C-----------CC----chhHHHHHHHHHHHHHH
Confidence 3467788999999987777664 457889999999875221 1 11 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|++++++||+.|+++..... .+.+...+..+.+ ...+.+.+|+|++++.++...
T Consensus 169 l~~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~--- 232 (250)
T 2cfc_A 169 VAVDY----AGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP---------QKEIGTAAQVADAVMFLAGED--- 232 (250)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSTT---
T ss_pred HHHHh----cccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCch---
Confidence 64210 12489999999999999865421 1223333332221 124789999999999988510
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 233 ------~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 233 ------ATYVNGAALVMDGAY 247 (250)
T ss_dssp ------CTTCCSCEEEESTTG
T ss_pred ------hhcccCCEEEECCce
Confidence 234568999887764
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.65 E-value=9.4e-08 Score=87.19 Aligned_cols=139 Identities=13% Similarity=0.115 Sum_probs=93.6
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
..+.+..+++|+.|+.++++++.. .+..++|++||..+..+. .+ ...|+.||+..|.+++
T Consensus 105 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~ 168 (249)
T 3f9i_A 105 DQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN------------PG----QANYCASKAGLIGMTK 168 (249)
T ss_dssp --CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC------------SC----SHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC------------CC----CchhHHHHHHHHHHHH
Confidence 346788999999999999998853 466799999998753221 11 4789999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+..+. ...|+++.+++|+.|.++......+........+. ....+.+++|+|+++..++...
T Consensus 169 ~la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~---- 231 (249)
T 3f9i_A 169 SLSYEV----ATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKI---------PLGTYGIPEDVAYAVAFLASNN---- 231 (249)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBC------CCHHHHHHHHHHC---------TTCSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHHH----HHcCcEEEEEecCccccCcccccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCc----
Confidence 764211 12579999999999998755443344333333222 2235788999999999888621
Q ss_pred CCCCCCCCCCCceEEEeCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 232 -----~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 232 -----ASYITGQTLHVNGGML 247 (249)
T ss_dssp -----GTTCCSCEEEESTTSS
T ss_pred -----cCCccCcEEEECCCEe
Confidence 2345799999988754
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.64 E-value=1e-07 Score=87.60 Aligned_cols=139 Identities=14% Similarity=0.110 Sum_probs=93.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+..+. .+ ...|+.||+..
T Consensus 107 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asKaa~ 170 (257)
T 3tpc_A 107 DSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ------------IG----QAAYAASKGGV 170 (257)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC------------TT----CHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC------------CC----CcchHHHHHHH
Confidence 456778999999999999999864 45689999998853321 11 47899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
|.+.+.+.... ...|+++.+++|+.|.++.................+. ...+.+.+|+++++..++.
T Consensus 171 ~~~~~~la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~--------~~r~~~~~dva~~v~~l~s- 237 (257)
T 3tpc_A 171 AALTLPAAREL----ARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPF--------PPRLGRAEEYAALVKHICE- 237 (257)
T ss_dssp HHHHHHHHHHH----GGGTEEEEEEEECCBSCC--------------CCSSS--------SCSCBCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHH----HHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHcc-
Confidence 98877654211 1258999999999999875443222222222211111 0347889999999999987
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 238 ----------~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 238 ----------NTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp ----------CTTCCSCEEEESTTCCC-
T ss_pred ----------cCCcCCcEEEECCCccCC
Confidence 456789999998886554
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.1e-08 Score=91.69 Aligned_cols=137 Identities=12% Similarity=0.095 Sum_probs=96.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C--C---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G--I---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQ 78 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g--v---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~ 78 (389)
+.+..+++|+.++.++++++... + . .++|++||..+ +.. +..+ ...|+.||+..|.
T Consensus 109 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~----------~~~~----~~~Y~~sK~a~~~ 173 (258)
T 3afn_B 109 FYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG-HTG----------GGPG----AGLYGAAKAFLHN 173 (258)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH-HHC----------CCTT----CHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh-ccC----------CCCC----chHHHHHHHHHHH
Confidence 35678899999999999987532 2 2 68999999774 220 0112 5789999999999
Q ss_pred HHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 79 LVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 79 ~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+++.+.... ...|++++++||+.|+++......+.+...+..+.+ ...+++++|+|++++.++...
T Consensus 174 ~~~~~~~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~~~~- 239 (258)
T 3afn_B 174 VHKNWVDFH----TKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIP---------MGRFGTAEEMAPAFLFFASHL- 239 (258)
T ss_dssp HHHHHHHHH----GGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCT---------TCSCBCGGGTHHHHHHHHCHH-
T ss_pred HHHHHHHhh----cccCeEEEEEeCCCcccccccccCHHHHHHHhccCC---------CCcCCCHHHHHHHHHHHhCcc-
Confidence 988764210 124799999999999998655433455554444321 236899999999999988520
Q ss_pred CCCCCCCCCC-CCCCceEEEeCCC
Q 016468 159 DDIPGQKGRP-IASGQPYFVSDGF 181 (389)
Q Consensus 159 ~~~~~~~~~~-~~~g~~y~i~~~~ 181 (389)
.. ...|+.|++.+|.
T Consensus 240 --------~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 240 --------ASGYITGQVLDINGGQ 255 (258)
T ss_dssp --------HHTTCCSEEEEESTTS
T ss_pred --------hhccccCCEEeECCCc
Confidence 11 3468999998775
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.61 E-value=7.1e-08 Score=90.05 Aligned_cols=146 Identities=14% Similarity=0.158 Sum_probs=92.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+..+ .+ . ...|+.||+..|.+.+.
T Consensus 126 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~--~----~~~Y~asKaa~~~l~~~ 189 (281)
T 3v2h_A 126 EQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVA----------SP--F----KSAYVAAKHGIMGLTKT 189 (281)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT--T----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccC----------CC--C----chHHHHHHHHHHHHHHH
Confidence 456678999999999999998 4556779999999875221 11 1 46899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHH--HcCC-CcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLA--KLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~--~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.+++|+.|+++......+...... .... ....+.++.....+.+++|+|++++.++...
T Consensus 190 la~e~----~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~-- 263 (281)
T 3v2h_A 190 VALEV----AESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDD-- 263 (281)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSG--
T ss_pred HHHHh----hhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCC--
Confidence 64211 2258999999999999875442222111100 0000 0111234445567999999999999887510
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 264 -------a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 264 -------AAQITGTHVSMDGGW 278 (281)
T ss_dssp -------GGGCCSCEEEESTTG
T ss_pred -------cCCCCCcEEEECCCc
Confidence 234579999998774
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.60 E-value=2.8e-08 Score=92.56 Aligned_cols=149 Identities=17% Similarity=0.084 Sum_probs=97.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 121 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~ 184 (281)
T 3s55_A 121 AQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG-HSA-----------NFA----QASYVSSKWGVIGLTKC 184 (281)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-GSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh-cCC-----------CCC----CchhHHHHHHHHHHHHH
Confidence 3567788999999999999974 456679999999875 221 111 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHH--HHHHHHHcCC----CcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP--RIVSLAKLGL----VPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~--~li~~~~~g~----~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.... ...|+++.+++|+.|++|....... .+........ .........+...+.+++|+|++++.++..
T Consensus 185 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~ 260 (281)
T 3s55_A 185 AAHDL----VGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDE 260 (281)
T ss_dssp HHHHT----GGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHH----hhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCC
Confidence 65321 2358999999999999986542110 0000000000 000001112225689999999999988852
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
. .....|+.+++.+|..++
T Consensus 261 ~---------~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 261 A---------SSHITGTVLPIDAGATAR 279 (281)
T ss_dssp G---------GTTCCSCEEEESTTGGGG
T ss_pred c---------ccCCCCCEEEECCCcccC
Confidence 1 234579999999887654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=2.3e-07 Score=86.03 Aligned_cols=136 Identities=13% Similarity=-0.029 Sum_probs=94.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CC------CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GI------QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gv------krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
.+.+..+++|+.|+.++++++... +. .++|++||..+ +.+ ..+ ...|+.||+..|
T Consensus 127 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~ 190 (276)
T 1mxh_A 127 AQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT-DLP-----------LPG----FCVYTMAKHALG 190 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG-GSC-----------CTT----CHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhh-cCC-----------CCC----CeehHHHHHHHH
Confidence 455678999999999999999884 44 79999999875 321 111 468999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.+.+.... ...|+++.+++|+.|+++ . ...+..........+. .+++.+.+|+|++++.++...
T Consensus 191 ~l~~~la~e~----~~~gi~v~~v~PG~v~t~-~-~~~~~~~~~~~~~~p~--------~r~~~~~~dva~~v~~l~s~~ 256 (276)
T 1mxh_A 191 GLTRAAALEL----APRHIRVNAVAPGLSLLP-P-AMPQETQEEYRRKVPL--------GQSEASAAQIADAIAFLVSKD 256 (276)
T ss_dssp HHHHHHHHHH----GGGTEEEEEEEESSBSCC-S-SSCHHHHHHHHTTCTT--------TSCCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHH----hhcCeEEEEEecCcccCC-c-cCCHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCcc
Confidence 9888764210 125899999999999998 3 2223333333322211 123789999999999888520
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 257 ---------~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 257 ---------AGYITGTTLKVDGGL 271 (276)
T ss_dssp ---------GTTCCSCEEEESTTG
T ss_pred ---------ccCccCcEEEECCch
Confidence 234468999988774
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.8e-07 Score=86.52 Aligned_cols=140 Identities=13% Similarity=0.020 Sum_probs=96.8
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 116 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 179 (266)
T 3uxy_A 116 ADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP------------GPG----HALYCLTKAALASLTQC 179 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC------------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC------------CCC----ChHHHHHHHHHHHHHHH
Confidence 456778899999999999999 5567789999999875221 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++.+++|+.|+++.... ........+... .....+.+++|+|++++.++.
T Consensus 180 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s 246 (266)
T 3uxy_A 180 MGMDH----APQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT---------VPLGRIAEPEDIADVVLFLAS 246 (266)
T ss_dssp HHHHH----GGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHh----hhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhC
Confidence 64211 2258999999999998753210 111122222222 223457899999999998885
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.. .....|+.+++.+|..++
T Consensus 247 ~~---------~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 247 DA---------ARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp GG---------GTTCCSCEEEESTTCCCC
T ss_pred ch---------hcCCcCCEEEECcCEeCC
Confidence 21 234579999998887653
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=1.2e-07 Score=86.99 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=93.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++++++... + ..++|++||..+ +. +..+ ...|+.||+..|.+..
T Consensus 107 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~-~~-----------~~~~----~~~Y~~sK~a~~~~~~ 170 (261)
T 1gee_A 107 SDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KI-----------PWPL----FVHYAASKGGMKLMTE 170 (261)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG-TS-----------CCTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHh-cC-----------CCCC----ccHHHHHHHHHHHHHH
Confidence 345678899999999998887653 4 679999999774 21 1112 5789999999988877
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.+.... ...+++++++||+.|+++...... +.....+.... ....+++++|+|++++.++...
T Consensus 171 ~la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~-- 235 (261)
T 1gee_A 171 TLALEY----APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI---------PMGYIGEPEEIAAVAAWLASSE-- 235 (261)
T ss_dssp HHHHHH----GGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGG--
T ss_pred HHHHHh----cccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcc--
Confidence 654210 124799999999999987543110 22222222211 1135789999999999887521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 236 -------~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 236 -------ASYVTGITLFADGGMT 251 (261)
T ss_dssp -------GTTCCSCEEEESTTGG
T ss_pred -------ccCCCCcEEEEcCCcc
Confidence 2345688999988754
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.57 E-value=2.6e-07 Score=84.15 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=99.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.. .+..++|++||..+..+. .+ ...|+.||+..|.+.+.
T Consensus 104 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~~ 167 (247)
T 3lyl_A 104 DEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN------------PG----QTNYCAAKAGVIGFSKS 167 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC------------CC----cHHHHHHHHHHHHHHHH
Confidence 45677899999999999999865 455699999998753321 11 47899999988888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+......+........+. ....+.+++|+|+++..++...
T Consensus 168 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~i~~l~s~~----- 229 (247)
T 3lyl_A 168 LAYEV----ASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKI---------PSGQIGEPKDIAAAVAFLASEE----- 229 (247)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTS---------TTCCCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HHcCeEEEEEeeCcEecccchhccHHHHHHHhhcC---------CCCCCcCHHHHHHHHHHHhCCC-----
Confidence 64211 12589999999999998865544444443333322 2245789999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 230 ----~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 230 ----AKYITGQTLHVNGGMYM 246 (247)
T ss_dssp ----GTTCCSCEEEESTTSSC
T ss_pred ----cCCccCCEEEECCCEec
Confidence 33457999999888654
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-07 Score=86.66 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=93.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+..+++|+.++.++++++... +..++|++||..+ +.+. .+ ...|+.||+..
T Consensus 114 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~-----------~~----~~~Y~~sK~a~ 177 (265)
T 2o23_A 114 EDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA-FEGQ-----------VG----QAAYSASKGGI 177 (265)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH-HHCC-----------TT----CHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh-cCCC-----------CC----CchhHHHHHHH
Confidence 356778999999999999999875 6779999999875 3211 11 47899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
|.+.+.+.... ...++++++++|+.|.++.....-...........+. ...+++.+|+|++++.+++
T Consensus 178 ~~~~~~la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~dva~~~~~l~~- 244 (265)
T 2o23_A 178 VGMTLPIARDL----APIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPF--------PSRLGDPAEYAHLVQAIIE- 244 (265)
T ss_dssp HHHHHHHHHHH----GGGTEEEEEEEECCBCCC----------CHHHHTCSS--------SCSCBCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHH----hhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCC--------cCCCCCHHHHHHHHHHHhh-
Confidence 88887654210 1257999999999998774332111111111111110 0247899999999999886
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.+...|+.+++.+|..+
T Consensus 245 ----------~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 245 ----------NPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp ----------CTTCCSCEEEESTTCCC
T ss_pred ----------cCccCceEEEECCCEec
Confidence 45678999999887644
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.56 E-value=2.3e-07 Score=85.57 Aligned_cols=140 Identities=18% Similarity=0.175 Sum_probs=98.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+... +..+ ...|+.||+..|.+.+.
T Consensus 110 ~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~~~----~~~Y~asK~a~~~l~~~ 174 (262)
T 3pk0_A 110 EQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT-----------GYPG----WSHYGATKAAQLGFMRT 174 (262)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB-----------CCTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC-----------CCCC----ChhhHHHHHHHHHHHHH
Confidence 355678999999999999998765 7789999999764111 1111 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|+++......+.....+....+. ..+.+.+|+|+++..++...
T Consensus 175 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~---------~r~~~p~dva~~v~~L~s~~----- 236 (262)
T 3pk0_A 175 AAIEL----APHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPA---------GALGTPEDIGHLAAFLATKE----- 236 (262)
T ss_dssp HHHHH----GGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc-----
Confidence 65311 2258999999999999874332233444444433221 23678999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 237 ----~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 237 ----AGYITGQAIAVDGGQVL 253 (262)
T ss_dssp ----GTTCCSCEEEESTTTTC
T ss_pred ----ccCCcCCEEEECCCeec
Confidence 33467999999888654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=3.7e-08 Score=90.18 Aligned_cols=150 Identities=14% Similarity=0.001 Sum_probs=89.3
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCC-----------------CCCCCCCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNES-----------------LPYFPIDEHV 66 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~-----------------~p~~p~~~~~ 66 (389)
+.+..+++|+.|+.++++++. +.+.+|+|++||..+ +......+..++ .+.. ..
T Consensus 78 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 152 (257)
T 1fjh_A 78 VLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS-AHLAFDKNPLALALEAGEEAKARAIVEHAGEQG----GN 152 (257)
T ss_dssp SHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG-GSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTH----HH
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh-hccccccchhhhhhcccchhhhhhhhhcccCCC----Cc
Confidence 468899999999999999996 456789999999885 422111000000 1111 24
Q ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 67 DSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 67 ~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
..|+.||+..|.+++.+..+. ...|+++++++|+.|.++....... ......... + ......+.+.+|
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~d 221 (257)
T 1fjh_A 153 LAYAGSKNALTVAVRKRAAAW----GEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK-----F--VPPMGRRAEPSE 221 (257)
T ss_dssp HHHHHHHHHHHHHHHHTHHHH----HHTTCEEEEEEECC--------------------------C--CCSTTSCCCTHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH----hhcCeEEEEEeeCCCCCccchhhccchhHHHHHHh-----c--ccccCCCCCHHH
Confidence 789999999999988764210 1257999999999998875432111 111111000 0 011124789999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+|++++.++... .....|+.+++.+|..
T Consensus 222 vA~~~~~l~~~~---------~~~~tG~~~~vdgG~~ 249 (257)
T 1fjh_A 222 MASVIAFLMSPA---------ASYVHGAQIVIDGGID 249 (257)
T ss_dssp HHHHHHHHTSGG---------GTTCCSCEEEESTTHH
T ss_pred HHHHHHHHhCch---------hcCCcCCEEEECCCcc
Confidence 999999987521 2245788998887753
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=7.6e-08 Score=88.65 Aligned_cols=144 Identities=12% Similarity=0.003 Sum_probs=98.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++...- -.++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+.
T Consensus 112 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~la 175 (261)
T 2wyu_A 112 QDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS-EKV-----------VPK----YNVMAIAKAALEASVRYLA 175 (261)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG-TSB-----------CTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccc-cCC-----------CCC----chHHHHHHHHHHHHHHHHH
Confidence 3567789999999999999998762 248999999774 211 111 4689999999999988764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|+++.... ..+.....+....+. ..+.+++|+|++++.++...
T Consensus 176 ~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s~~----- 237 (261)
T 2wyu_A 176 YEL----GPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL---------RRNITQEEVGNLGLFLLSPL----- 237 (261)
T ss_dssp HHH----GGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGG-----
T ss_pred HHH----hhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcChh-----
Confidence 211 1258999999999999985432 223444433332211 23678999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEF 188 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~ 188 (389)
.....|+.+++.+|..++..|+
T Consensus 238 ----~~~~tG~~~~vdgG~~~~~~~~ 259 (261)
T 2wyu_A 238 ----ASGITGEVVYVDAGYHIMGMEL 259 (261)
T ss_dssp ----GTTCCSCEEEESTTGGGBC---
T ss_pred ----hcCCCCCEEEECCCccccCCCC
Confidence 2345689999998876654443
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.56 E-value=1e-07 Score=87.47 Aligned_cols=145 Identities=17% Similarity=0.121 Sum_probs=95.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++.. .+.+++|++||..+.++. + + ...|+.||+..|.+.+.+
T Consensus 100 ~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~~sK~a~~~~~~~l 163 (256)
T 2d1y_A 100 EWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE----------Q--E----NAAYNASKGGLVNLTRSL 163 (256)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------T--T----BHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------C--C----ChhHHHHHHHHHHHHHHH
Confidence 4567899999999999998864 467899999998753221 1 1 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHH-HHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSL-AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~-~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.... ...++++.+++|+.|.++.. ...+.. .........+.+......+++++|+|++++.++...
T Consensus 164 a~e~----~~~gi~v~~v~Pg~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~----- 230 (256)
T 2d1y_A 164 ALDL----APLRIRVNAVAPGAIATEAV----LEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK----- 230 (256)
T ss_dssp HHHH----GGGTEEEEEEEECSBCCHHH----HHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHH----hhcCeEEEEEeeCCccCchh----hhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch-----
Confidence 4211 12579999999999975421 111000 001111111122223346899999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCCCCCh
Q 016468 163 GQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|+.+++.+|..+++
T Consensus 231 ----~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 231 ----ASFITGAILPVDGGMTASF 249 (256)
T ss_dssp ----GTTCCSCEEEESTTGGGBC
T ss_pred ----hcCCCCCEEEECCCccccc
Confidence 2245789999998876554
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.55 E-value=4.2e-07 Score=84.21 Aligned_cols=136 Identities=16% Similarity=0.124 Sum_probs=97.2
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 109 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~l~~~ 172 (271)
T 3tzq_B 109 DVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATA-HAA-----------YDM----STAYACTKAAIETLTRY 172 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-TSB-----------CSS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHH-cCC-----------CCC----ChHHHHHHHHHHHHHHH
Confidence 345678999999999999999 6677789999999875 221 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++.+++|+.|+++.... .............+. ..+...+|+|++++.++...
T Consensus 173 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~r~~~p~dvA~~v~~L~s~~---- 235 (271)
T 3tzq_B 173 VATQY----GRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLA---------GRIGEPHEIAELVCFLASDR---- 235 (271)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHH----hhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc----
Confidence 65211 1258999999999999986552 223333433333211 23678999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+++.+|
T Consensus 236 -----~~~itG~~i~vdGG 249 (271)
T 3tzq_B 236 -----AAFITGQVIAADSG 249 (271)
T ss_dssp -----GTTCCSCEEEESTT
T ss_pred -----cCCcCCCEEEECCC
Confidence 33467999999887
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=98.55 E-value=7.8e-08 Score=90.07 Aligned_cols=149 Identities=15% Similarity=-0.015 Sum_probs=93.3
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCC-CCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNE-SLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E-~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+.+..+++|+.|+.++++++.....+|+|++||..+..+.......++ ..++.+ ...|+.||+..|.+.+.+.
T Consensus 105 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~sK~a~~~~~~~la 180 (291)
T 3rd5_A 105 VDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSP----WLAYSQSKLANLLFTSELQ 180 (291)
T ss_dssp TTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCC----cchHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999998889999999885433322222222 222222 5789999999998887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.+... .+.++++.+++|+.|..+-...........+... ...+-....+|+|++++.++.
T Consensus 181 ~e~~~--~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~A~~~~~l~~--------- 240 (291)
T 3rd5_A 181 RRLTA--AGSPLRALAAHPGYSHTNLQGASGRKLGDALMSA---------ATRVVATDADFGARQTLYAAS--------- 240 (291)
T ss_dssp HHHHH--TTCCCEEEEECCSGGGSCC-----------------------------CHHHHHHHHHHHHHHH---------
T ss_pred HHHhh--CCCCEEEEEeeCCCCccccccccchHHHHHHHHH---------HHHHHhCCHHHHHHHHHHHHc---------
Confidence 32100 1124999999999997764432211111111110 011223458999999999987
Q ss_pred CCCCCCCCceEEEeCC
Q 016468 165 KGRPIASGQPYFVSDG 180 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~ 180 (389)
.+...|+.+.+.+|
T Consensus 241 --~~~~~G~~~~vdgG 254 (291)
T 3rd5_A 241 --QDLPGDSFVGPRFG 254 (291)
T ss_dssp --SCCCTTCEEEETTS
T ss_pred --CCCCCCceeCCccc
Confidence 34567887777654
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.4e-07 Score=87.42 Aligned_cols=138 Identities=17% Similarity=0.134 Sum_probs=89.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+.++..+ ....|+.||+..|.+
T Consensus 127 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------------~~~~Y~asKaa~~~~ 191 (272)
T 4e3z_A 127 ERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSAT---------------QYVDYAASKAAIDTF 191 (272)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTT---------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCC---------------CcchhHHHHHHHHHH
Confidence 456788999999999999999765 3458999999886443210 135799999999998
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
++.+.... ...|+++.+++|+.|+++.... ..+........+ .....+.+++|+|++++.++...
T Consensus 192 ~~~la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~edvA~~i~~l~s~~- 257 (272)
T 4e3z_A 192 TIGLAREV----AAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPS---------VPMQRAGMPEEVADAILYLLSPS- 257 (272)
T ss_dssp HHHHHHHH----GGGTEEEEEEEECSBC------------------C---------CTTSSCBCHHHHHHHHHHHHSGG-
T ss_pred HHHHHHHH----HHcCcEEEEEecCCCcCCcccccCChHHHHHHhhc---------CCcCCCcCHHHHHHHHHHHhCCc-
Confidence 87664211 1258999999999999875432 112222222211 12234678999999999988521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 258 --------~~~~tG~~i~vdgG~ 272 (272)
T 4e3z_A 258 --------ASYVTGSILNVSGGR 272 (272)
T ss_dssp --------GTTCCSCEEEESTTC
T ss_pred --------cccccCCEEeecCCC
Confidence 334579999998763
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.3e-07 Score=88.91 Aligned_cols=139 Identities=19% Similarity=0.157 Sum_probs=98.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCcee-cCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVV-FGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vv-yg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+. ++ ..+ ...|+.||+..|.+.+
T Consensus 141 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~------------~~~----~~~Y~asKaa~~~l~~ 204 (293)
T 3rih_A 141 EQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG------------YPG----WSHYGASKAAQLGFMR 204 (293)
T ss_dssp HHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC------------CCC----CHHHHHHHHHHHHHHH
Confidence 3567789999999999999984 5677899999997641 11 111 4789999999999888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...|+++.+++|+.|+++......+.....+....+.. .+...+|+++++..++...
T Consensus 205 ~la~e~----~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~---------r~~~p~dvA~~v~fL~s~~---- 267 (293)
T 3rih_A 205 TAAIEL----APRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMG---------MLGSPVDIGHLAAFLATDE---- 267 (293)
T ss_dssp HHHHHH----GGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTS---------SCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHHH----hhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHhCcc----
Confidence 764211 12589999999999998743322334444444433221 2457899999998887521
Q ss_pred CCCCCCCCCCCceEEEeCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 268 -----a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 268 -----AGYITGQAIVVDGGQVL 284 (293)
T ss_dssp -----GTTCCSCEEEESTTTTC
T ss_pred -----ccCCCCCEEEECCCccC
Confidence 34567999999888654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.8e-07 Score=85.21 Aligned_cols=140 Identities=13% Similarity=0.144 Sum_probs=91.0
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.|+.++.+++ ++.+. +++|++||..+ +.+. .+ ...|+.||+..|.++..
T Consensus 105 ~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~-----------~~----~~~Y~~sK~a~~~~~~~ 168 (251)
T 1zk4_A 105 EWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG-FVGD-----------PS----LGAYNASKGAVRIMSKS 168 (251)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG-TSCC-----------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchh-ccCC-----------CC----CccchHHHHHHHHHHHH
Confidence 45678999999887766665 45566 79999999875 3211 11 47899999999998876
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+..+. . .+..+++++++||+.|+++............ .. ........+++.+|++++++.++...
T Consensus 169 ~a~e~-~-~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~dva~~~~~l~~~~----- 233 (251)
T 1zk4_A 169 AALDC-A-LKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-SQ-------RTKTPMGHIGEPNDIAYICVYLASNE----- 233 (251)
T ss_dssp HHHHH-H-HTTCSEEEEEEEECCBCCHHHHTSTTHHHHH-TS-------TTTCTTSSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHh-c-ccCCCeEEEEEeeCcCcchhhhhcCchhhhH-HH-------hhcCCCCCCcCHHHHHHHHHHHcCcc-----
Confidence 54210 0 0136899999999999987432211111110 00 01111235899999999999988521
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 234 ----~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 234 ----SKFATGSEFVVDGGYT 249 (251)
T ss_dssp ----GTTCCSCEEEESTTGG
T ss_pred ----cccccCcEEEECCCcc
Confidence 2235689999988754
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.4e-07 Score=86.40 Aligned_cols=138 Identities=10% Similarity=0.064 Sum_probs=91.5
Q ss_pred CcchhhhHhhhhHHHHHHH----HHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIE----ACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~----aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+ .+++.+.+++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 103 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 166 (249)
T 1o5i_A 103 EDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV-ISP-----------IEN----LYTSNSARMALTGFLKT 166 (249)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHh-cCC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 3456788999999776654 455667889999999884 321 111 47899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHH-HHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS-LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~-~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..... ...|+++.+++|+.|+++......+.... ...... ....+.+.+|+|++++.++...
T Consensus 167 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~i~~l~s~~---- 229 (249)
T 1o5i_A 167 LSFEV----APYGITVNCVAPGWTETERVKELLSEEKKKQVESQI---------PMRRMAKPEEIASVVAFLCSEK---- 229 (249)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTS---------TTSSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHh----hhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcc----
Confidence 54210 12589999999999998743211111111 222111 1134789999999998887521
Q ss_pred CCCCCCCCCCCceEEEeCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 230 -----~~~~tG~~~~vdgG~~ 245 (249)
T 1o5i_A 230 -----ASYLTGQTIVVDGGLS 245 (249)
T ss_dssp -----GTTCCSCEEEESTTCC
T ss_pred -----ccCCCCCEEEECCCcc
Confidence 2345689999888753
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=2.3e-07 Score=85.61 Aligned_cols=140 Identities=13% Similarity=0.086 Sum_probs=97.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++...- -.++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+.
T Consensus 114 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~la 177 (265)
T 1qsg_A 114 EGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA-ERA-----------IPN----YNVMGLAKASLEANVRYMA 177 (265)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG-TSB-----------CTT----TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh-ccC-----------CCC----chHHHHHHHHHHHHHHHHH
Confidence 3567789999999999999998762 248999999774 211 111 4689999999999988764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|+++.... ..+.....+..+.+. ..+.+++|+|++++.++...
T Consensus 178 ~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~v~~l~s~~----- 239 (265)
T 1qsg_A 178 NAM----GPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI---------RRTVTIEDVGNSAAFLCSDL----- 239 (265)
T ss_dssp HHH----TTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHTSGG-----
T ss_pred HHh----hhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCch-----
Confidence 211 2358999999999999985432 223444433332211 13678999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 240 ----~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 240 ----SAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp ----GTTCCSCEEEESTTGGGB
T ss_pred ----hcCccCCEEEECCCcCCC
Confidence 234468999998886543
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=98.51 E-value=3.7e-07 Score=84.67 Aligned_cols=138 Identities=11% Similarity=0.029 Sum_probs=94.2
Q ss_pred cchhhhHhhhhH----HHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNING----TCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~g----t~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.| ++++++.+++.+.+++|++||..+..+ .+..+ ...|+.||+..|.+++.+
T Consensus 136 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~----~~~Y~~sK~a~~~~~~~l 201 (279)
T 3ctm_A 136 SWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV----------NIPQL----QAPYNTAKAACTHLAKSL 201 (279)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-------------CC----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC----------CCCCC----cccHHHHHHHHHHHHHHH
Confidence 456788999999 678888888888899999999874221 00111 478999999999999886
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
..+. ...+ ++.+++|+.|..+-.....+..........+ ...+++.+|+|++++.++...
T Consensus 202 a~e~----~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~------ 261 (279)
T 3ctm_A 202 AIEW----APFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTP---------LGREGLTQELVGGYLYLASNA------ 261 (279)
T ss_dssp HHHT----TTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHST---------TCSCBCGGGTHHHHHHHHSGG------
T ss_pred HHHh----cccC-CEEEEeccCCccccccccChHHHHHHHHhCC---------ccCCcCHHHHHHHHHHHhCcc------
Confidence 5321 2246 9999999999887543222233222221111 124789999999999988521
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 262 ---~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 262 ---STFTTGSDVVIDGGYT 277 (279)
T ss_dssp ---GTTCCSCEEEESTTCC
T ss_pred ---ccCccCCEEEECCCee
Confidence 2345789999988754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=8.6e-08 Score=88.15 Aligned_cols=139 Identities=12% Similarity=0.065 Sum_probs=95.0
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++. +.+.+++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+
T Consensus 115 ~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~l 178 (260)
T 2zat_A 115 VWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGA-YHP-----------FPN----LGPYNVSKTALLGLTKNL 178 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhh-cCC-----------CCC----chhHHHHHHHHHHHHHHH
Confidence 456788999999999999875 457889999999874 321 111 478999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|+++.+++|+.|.++...... .........+ .....+.+++|+|+++..++...
T Consensus 179 a~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~v~~l~s~~---- 241 (260)
T 2zat_A 179 AVEL----APRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES---------LRIRRLGNPEDCAGIVSFLCSED---- 241 (260)
T ss_dssp HHHH----GGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH---------HTCSSCBCGGGGHHHHHHHTSGG----
T ss_pred HHHh----cccCeEEEEEEECcccCccchhcccChHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcc----
Confidence 4211 125799999999999876432100 0111111111 11235789999999999887520
Q ss_pred CCCCCCCCCCCceEEEeCCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|...+
T Consensus 242 -----~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 242 -----ASYITGETVVVGGGTASR 259 (260)
T ss_dssp -----GTTCCSCEEEESTTCCCC
T ss_pred -----cCCccCCEEEECCCcccc
Confidence 223478999999988766
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.51 E-value=2.9e-07 Score=84.13 Aligned_cols=146 Identities=12% Similarity=0.035 Sum_probs=86.8
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 96 ~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 159 (250)
T 2fwm_X 96 EDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAA-HTP-----------RIG----MSAYGASKAALKSLALS 159 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhh-CCC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 456788999999999999999 4567789999999874 211 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHH-HHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVS-LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~-~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.+++|+.|+++...... ..... .+.... ...........+.+.+|+|++++.++...
T Consensus 160 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~dvA~~v~~l~s~~-- 231 (250)
T 2fwm_X 160 VGLEL----AGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG--EQFKLGIPLGKIARPQEIANTILFLASDL-- 231 (250)
T ss_dssp HHHHH----GGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSGG--
T ss_pred HHHHh----CccCCEEEEEECCcccCccccccccChhHHHHHHhhhh--hcccccCCCCCCcCHHHHHHHHHHHhCcc--
Confidence 64210 125899999999999987543211 00001 110000 00000011124789999999999888521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 232 -------~~~~tG~~i~vdGG~~~ 248 (250)
T 2fwm_X 232 -------ASHITLQDIVVDGGSTL 248 (250)
T ss_dssp -------GTTCCSCEEEESTTTTT
T ss_pred -------ccCCCCCEEEECCCccc
Confidence 23457999988887543
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.6e-07 Score=86.56 Aligned_cols=138 Identities=13% Similarity=0.070 Sum_probs=93.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.|+.++++++... + ..++|++||..+ +.+ .| + ...|+.||+..|.+.+.
T Consensus 109 ~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~---------~~--~----~~~Y~~sK~a~~~~~~~ 172 (263)
T 3ak4_A 109 EWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAA-KVG---------AP--L----LAHYSASKFAVFGWTQA 172 (263)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG-TSC---------CT--T----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc-ccC---------CC--C----chhHHHHHHHHHHHHHH
Confidence 56778999999999999998753 4 679999999874 211 11 1 46899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-----------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+.... ...|++++++||+.|+++...... +......... .....+++++|+|++++
T Consensus 173 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~v~ 239 (263)
T 3ak4_A 173 LAREM----APKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL---------TPLGRIEEPEDVADVVV 239 (263)
T ss_dssp HHHHH----GGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT---------CTTCSCBCHHHHHHHHH
T ss_pred HHHHH----hHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 64210 125899999999999876322110 1111111111 12235899999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.++... .....|+.|++.+|..+
T Consensus 240 ~l~s~~---------~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 240 FLASDA---------ARFMTGQGINVTGGVRM 262 (263)
T ss_dssp HHHSGG---------GTTCCSCEEEESSSSSC
T ss_pred HHhCcc---------ccCCCCCEEEECcCEeC
Confidence 988521 22457899999887543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=98.50 E-value=4.2e-07 Score=83.31 Aligned_cols=144 Identities=12% Similarity=0.147 Sum_probs=92.7
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+.+++|++||..+ +.+. + + ...|+.||+..|.+.+.
T Consensus 101 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~--~----~~~Y~~sK~a~~~~~~~ 164 (255)
T 2q2v_A 101 ESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHG-LVGS---------T--G----KAAYVAAKHGVVGLTKV 164 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-TSCC---------T--T----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchh-ccCC---------C--C----chhHHHHHHHHHHHHHH
Confidence 345678999999777666655 5677889999999875 3211 1 1 46899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCc----cee-cCCCccccceeHHHHHHHHHHHHhcc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP----FKI-GEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~----~~~-g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
+.... ...|+++++++|+.|+++......... ... +... ..+ ........+++++|+|++++.++...
T Consensus 165 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~ 237 (255)
T 2q2v_A 165 VGLET----ATSNVTCNAICPGWVLTPLVQKQIDDR-AAN--GGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA 237 (255)
T ss_dssp HHHHT----TTSSEEEEEEEESSBCCHHHHHHHHHH-HHH--TCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHh----cccCcEEEEEeeCCCcCcchhhhcccc-ccc--ccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence 64321 236899999999999886422110000 000 0000 001 12223346899999999999887520
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.|++.+|..
T Consensus 238 ---------~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 238 ---------GSQVRGAAWNVDGGWL 253 (255)
T ss_dssp ---------GTTCCSCEEEESTTGG
T ss_pred ---------cCCCCCCEEEECCCcc
Confidence 2235689999988753
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.50 E-value=4e-07 Score=83.91 Aligned_cols=134 Identities=15% Similarity=0.042 Sum_probs=90.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+++.. .+..++|++||..+..+ ..+ ...|+.||+..|.+.+.+
T Consensus 121 ~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~l 184 (260)
T 3gem_A 121 NFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKG------------SSK----HIAYCATKAGLESLTLSF 184 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTC------------CSS----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC------------CCC----cHhHHHHHHHHHHHHHHH
Confidence 4557899999999999999864 35679999999875321 111 478999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... . .++++.+++|+.|..+... ............+. .-+...+|+|++++.+++
T Consensus 185 a~e~----~-~~Irvn~v~PG~v~t~~~~--~~~~~~~~~~~~p~---------~r~~~~edva~~v~~L~~-------- 240 (260)
T 3gem_A 185 AARF----A-PLVKVNGIAPALLMFQPKD--DAAYRANALAKSAL---------GIEPGAEVIYQSLRYLLD-------- 240 (260)
T ss_dssp HHHH----T-TTCEEEEEEECTTCC-----------------CCS---------CCCCCTHHHHHHHHHHHH--------
T ss_pred HHHH----C-CCCEEEEEeecccccCCCC--CHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhh--------
Confidence 5321 1 2599999999999876432 11112222222111 224568999999999886
Q ss_pred CCCCCCCCCceEEEeCCCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 241 ---~~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 241 ---STYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp ---CSSCCSCEEEESTTTTTC
T ss_pred ---CCCCCCCEEEECCCcccC
Confidence 566789999999887654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=1.8e-07 Score=85.66 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=97.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+..++|++||..+.++. .+ ...|+.||+..|.+.+.
T Consensus 113 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asK~a~~~~~~~ 176 (256)
T 3ezl_A 113 EDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ------------FG----QTNYSTAKAGIHGFTMS 176 (256)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC------------SC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC------------CC----CcccHHHHHHHHHHHHH
Confidence 456778999999988887776 44577899999998753321 11 47899999998888876
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+......+.....+....+. ..+.+.+|+|+++..++...
T Consensus 177 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~s~~----- 238 (256)
T 3ezl_A 177 LAQEV----ATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPV---------RRLGSPDEIGSIVAWLASEE----- 238 (256)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCc-----
Confidence 54211 1257999999999998764333334445444433321 24678999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 239 ----~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 239 ----SGFSTGADFSLNGGLHM 255 (256)
T ss_dssp ----GTTCCSCEEEESTTSCC
T ss_pred ----ccCCcCcEEEECCCEeC
Confidence 34567999999888654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.50 E-value=3.2e-07 Score=84.20 Aligned_cols=139 Identities=11% Similarity=0.083 Sum_probs=95.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc------------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF------------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKS 74 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~------------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~ 74 (389)
.+.+..+++|+.|+.++++++... +-.++|++||..+..+ .+ ....|+.||+
T Consensus 105 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~---------------~~~~Y~asKa 168 (257)
T 3tl3_A 105 AAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDG-QI---------------GQAAYSASKG 168 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CC-HH---------------HHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCC-CC---------------CCccHHHHHH
Confidence 456788999999999999999864 2348999999885321 11 1468999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 75 VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 75 ~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
..+.+.+.+..+. ...|+++.+++|+.|..+-................+. ...+.+.+|+|++++.++
T Consensus 169 a~~~~~~~la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~r~~~p~dva~~v~~l~ 236 (257)
T 3tl3_A 169 GVVGMTLPIARDL----ASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPH--------PSRLGNPDEYGALAVHII 236 (257)
T ss_dssp HHHHHHHHHHHHH----GGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSS--------SCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh----cccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCC--------CCCccCHHHHHHHHHHHh
Confidence 9888877654211 2258999999999998875543333333333333211 024788999999999998
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
. .+...|+.+++.+|..+.
T Consensus 237 s-----------~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 237 E-----------NPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp H-----------CTTCCSCEEEESTTC---
T ss_pred c-----------CCCCCCCEEEECCCccCC
Confidence 7 456789999998886543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=8.8e-08 Score=88.15 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=93.9
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++. +.+.+++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+
T Consensus 110 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~l 173 (260)
T 2ae2_A 110 DYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG-ALA-----------VPY----EAVYGATKGAMDQLTRCL 173 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh-ccC-----------CCC----cchHHHHHHHHHHHHHHH
Confidence 556788999999999999994 467789999999874 221 111 468999999999999876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHH---HHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVS---LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~---~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.... ...|+++.+++|+.|.++..... -+.... ..... .....+.+.+|+|++++.++...
T Consensus 174 a~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dvA~~v~~l~s~~- 239 (260)
T 2ae2_A 174 AFEW----AKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR---------CALRRMGEPKELAAMVAFLCFPA- 239 (260)
T ss_dssp HHHT----GGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT---------STTCSCBCHHHHHHHHHHHHSGG-
T ss_pred HHHH----hhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCcc-
Confidence 5321 22589999999999986521100 011111 11111 11235889999999999887510
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 240 --------~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 240 --------ASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp --------GTTCCSCEEEESTTGGGC
T ss_pred --------ccCCCCCEEEECCCcccc
Confidence 234578999998886543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=2.6e-07 Score=84.96 Aligned_cols=146 Identities=12% Similarity=0.153 Sum_probs=90.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||..+.++. .+ ...|+.||+..|.+.+.
T Consensus 105 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~~sK~a~~~~~~~ 168 (260)
T 1x1t_A 105 EKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS------------AN----KSAYVAAKHGVVGFTKV 168 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC------------CC----CchHHHHHHHHHHHHHH
Confidence 35577899999999999998853 467899999998752211 11 47899999999998876
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHH--cCCCccee-cCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK--LGLVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~--~g~~~~~~-g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.+++|+.|.++......+....... .......+ ........+.+.+|++++++.++...
T Consensus 169 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~-- 242 (260)
T 1x1t_A 169 TALET----AGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDA-- 242 (260)
T ss_dssp HHHHH----TTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGG--
T ss_pred HHHHh----ccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChh--
Confidence 54210 23589999999999998754322111100000 00000000 00011235789999999999888521
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 243 -------~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 243 -------AAQITGTTVSVDGGW 257 (260)
T ss_dssp -------GTTCCSCEEEESTTG
T ss_pred -------hcCCCCCEEEECCCc
Confidence 234578999888774
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=2e-07 Score=85.15 Aligned_cols=137 Identities=19% Similarity=0.162 Sum_probs=69.2
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+..++|++||..+ |. + ...|+.||+..|.+.+.
T Consensus 111 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~--------------~----~~~Y~asK~a~~~~~~~ 171 (253)
T 3qiv_A 111 EYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAA-WL--------------Y----SNYYGLAKVGINGLTQQ 171 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------------------CCHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccc-cC--------------C----CchhHHHHHHHHHHHHH
Confidence 345678999999966666655 4556779999999874 31 1 36799999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++.+++|+.|+++......+ .+...+..+. ....+.+++|++++++.++...
T Consensus 172 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~---- 234 (253)
T 3qiv_A 172 LSREL----GGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGL---------PLSRMGTPDDLVGMCLFLLSDE---- 234 (253)
T ss_dssp HHHHT----TTTTEEEEEEEC----------------------------------------CCHHHHHHHHHHSGG----
T ss_pred HHHHH----hhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccC---------CCCCCCCHHHHHHHHHHHcCcc----
Confidence 65321 2368999999999999885542211 2222222222 1234567899999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.|++.+|..++
T Consensus 235 -----~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 235 -----ASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp -----GTTCCSCEEEC-------
T ss_pred -----ccCCCCCEEEECCCeecC
Confidence 234579999999887543
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.1e-07 Score=88.50 Aligned_cols=136 Identities=15% Similarity=0.098 Sum_probs=92.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+.+..+++|+.|+.++++++... +.+++|++||..+.++ ..+ ...|+.||+..|.+.+
T Consensus 122 ~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asK~a~~~~~~ 185 (277)
T 2rhc_B 122 LWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG------------VVH----AAPYSASKHGVVGFTK 185 (277)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC------------CCC----CccHHHHHHHHHHHHH
Confidence 45678999999999999998765 6679999999875322 111 4789999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-----------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
.+.... ...|+++++++|+.|+++...... .........+ .....+++.+|+|+++
T Consensus 186 ~la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v 252 (277)
T 2rhc_B 186 ALGLEL----ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR---------VPIGRYVQPSEVAEMV 252 (277)
T ss_dssp HHHHHH----TTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHH---------STTSSCBCHHHHHHHH
T ss_pred HHHHHH----HHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhc---------CCCCCCcCHHHHHHHH
Confidence 764210 235899999999999876321110 0111111111 1123588999999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+.++... .....|+.+++.+|.
T Consensus 253 ~~l~s~~---------~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 253 AYLIGPG---------AAAVTAQALNVCGGL 274 (277)
T ss_dssp HHHHSGG---------GTTCCSCEEEESTTC
T ss_pred HHHhCch---------hcCCCCcEEEECCCc
Confidence 9887521 224578999988774
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.47 E-value=4.6e-07 Score=86.36 Aligned_cols=85 Identities=19% Similarity=0.209 Sum_probs=62.3
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++++++ ++.+..++|++||..+..+. .+ ....|+.||+..|.+.+.
T Consensus 109 ~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~---------~~------~~~~Y~asKaa~~~~~~~ 173 (324)
T 3u9l_A 109 EQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT---------PP------YLAPYFAAKAAMDAIAVQ 173 (324)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------CS------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC---------CC------cchhHHHHHHHHHHHHHH
Confidence 345678899999999999999 66688899999998752121 01 146899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPG 110 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~ 110 (389)
+.... ...|+++++++|+.|.++.
T Consensus 174 la~el----~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 174 YAREL----SRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp HHHHH----HTTTEEEEEEEECCC----
T ss_pred HHHHh----hhhCcEEEEEECCccccCc
Confidence 64210 2258999999999998653
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=1.6e-07 Score=87.12 Aligned_cols=138 Identities=12% Similarity=0.084 Sum_probs=95.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++++++. +.+..++|++||..+.++. + . ...|+.||+..|.+.+.
T Consensus 128 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asK~a~~~l~~~ 191 (269)
T 4dmm_A 128 DDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN----------P--G----QANYSAAKAGVIGLTKT 191 (269)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC----------T--T----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC----------C--C----chhHHHHHHHHHHHHHH
Confidence 4567789999999999999984 3566799999998754321 1 1 47899999988888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+....... ....... ....+.+.+|+|++++.++...
T Consensus 192 la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~---------p~~r~~~~~dvA~~v~~l~s~~----- 250 (269)
T 4dmm_A 192 VAKEL----ASRGITVNAVAPGFIATDMTSELAA---EKLLEVI---------PLGRYGEAAEVAGVVRFLAADP----- 250 (269)
T ss_dssp HHHHH----GGGTCEEEEEEECCBTTSCSCHHHH---HHHGGGC---------TTSSCBCHHHHHHHHHHHHHCG-----
T ss_pred HHHHH----hhhCcEEEEEEECCCcCcccccccH---HHHHhcC---------CCCCCCCHHHHHHHHHHHhCCc-----
Confidence 54211 1258999999999998875542111 2222221 1234678999999999988610
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
......|+.+++.+|..++
T Consensus 251 ---~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 251 ---AAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp ---GGGGCCSCEEEESTTSCCC
T ss_pred ---ccCCCcCCEEEECCCeecC
Confidence 0224569999998886543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.47 E-value=5.5e-07 Score=83.97 Aligned_cols=137 Identities=10% Similarity=0.016 Sum_probs=94.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++++++...-. .++|++||..+..+ ..+ ...|+.||+..|.+.+.+
T Consensus 125 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~~l 188 (285)
T 2p91_A 125 EGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKV------------VPH----YNVMGIAKAALESTVRYL 188 (285)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSB------------CTT----TTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccC------------CCC----ccHHHHHHHHHHHHHHHH
Confidence 35567899999999999999987633 69999999774211 111 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|+++.+++|+.|+++..... .+.....+....+. ..+.+++|+|++++.++...
T Consensus 189 a~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dva~~~~~l~s~~---- 251 (285)
T 2p91_A 189 AYDI----AKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------GKPITIEDVGDTAVFLCSDW---- 251 (285)
T ss_dssp HHHH----HTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHTSGG----
T ss_pred HHHh----cccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCCc----
Confidence 4210 12589999999999999864421 23444433322211 13678999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 252 -----~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 252 -----ARAITGEVVHVDNGY 266 (285)
T ss_dssp -----GTTCCSCEEEESTTG
T ss_pred -----ccCCCCCEEEECCCc
Confidence 234468899888774
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.7e-07 Score=84.44 Aligned_cols=135 Identities=9% Similarity=0.029 Sum_probs=96.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++...-. .++|++||..+.++ ..+ ...|+.||+..|.+++.+.
T Consensus 110 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~~sKaa~~~~~~~la 173 (251)
T 3orf_A 110 KSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR------------TSG----MIAYGATKAATHHIIKDLA 173 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------CTT----BHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC------------CCC----CchhHHHHHHHHHHHHHHH
Confidence 35677889999999999999987532 38999999875321 111 4789999999999999887
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
... . ....++++.+++|+.|..+ +...... ......+++.+|+|++++.++...
T Consensus 174 ~e~-~-~~~~gi~v~~v~PG~v~t~--------~~~~~~~---------~~~~~~~~~~~dva~~i~~l~~~~------- 227 (251)
T 3orf_A 174 SEN-G-GLPAGSTSLGILPVTLDTP--------TNRKYMS---------DANFDDWTPLSEVAEKLFEWSTNS------- 227 (251)
T ss_dssp STT-S-SSCTTCEEEEEEESCBCCH--------HHHHHCT---------TSCGGGSBCHHHHHHHHHHHHHCG-------
T ss_pred HHh-c-ccCCCcEEEEEecCcCcCc--------chhhhcc---------cccccccCCHHHHHHHHHHHhcCc-------
Confidence 531 0 0136899999999998653 1221111 123346789999999999998720
Q ss_pred CCCCCCCCceEEEeCCCCCC
Q 016468 165 KGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s 184 (389)
......|+.+++.+++..+
T Consensus 228 -~~~~~tG~~i~v~~g~~~~ 246 (251)
T 3orf_A 228 -DSRPTNGSLVKFETKSKVT 246 (251)
T ss_dssp -GGCCCTTCEEEEEEETTEE
T ss_pred -cccCCcceEEEEecCCccc
Confidence 0245679999998776543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.2e-07 Score=83.37 Aligned_cols=135 Identities=9% Similarity=-0.056 Sum_probs=96.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++...-. .++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+.
T Consensus 82 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~la 145 (223)
T 3uce_A 82 TQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS-RKV-----------VAN----TYVKAAINAAIEATTKVLA 145 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh-ccC-----------CCC----chHHHHHHHHHHHHHHHHH
Confidence 35667899999999999999987632 38999999874 221 111 4789999999999888775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHH----HHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPR----IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~----li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
... ..+++.+++|+.|..+........ +........+ ...+.+++|+|++++.++.
T Consensus 146 ~e~------~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA~~~~~l~~----- 205 (223)
T 3uce_A 146 KEL------APIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP---------VGKVGEASDIAMAYLFAIQ----- 205 (223)
T ss_dssp HHH------TTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHH-----
T ss_pred Hhh------cCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC---------CCCccCHHHHHHHHHHHcc-----
Confidence 321 129999999999998754433222 2222222221 2346789999999999987
Q ss_pred CCCCCCCCCCCCceEEEeCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 206 ------~~~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 206 ------NSYMTGTVIDVDGGALL 222 (223)
T ss_dssp ------CTTCCSCEEEESTTGGG
T ss_pred ------CCCCCCcEEEecCCeec
Confidence 45668999999888654
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.4e-07 Score=85.12 Aligned_cols=141 Identities=16% Similarity=0.066 Sum_probs=97.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 110 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~~~~~ 173 (256)
T 3gaf_A 110 SDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG-ENT-----------NVR----MASYGSSKAAVNHLTRN 173 (256)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-TCC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH-cCC-----------CCC----chHHHHHHHHHHHHHHH
Confidence 4567789999999999999984 456679999999875 211 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++.+++|+.|..+.... ..+.....+.... ....+.+.+|+|++++.++...
T Consensus 174 la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------p~~r~~~~~dva~~~~~L~s~~---- 236 (256)
T 3gaf_A 174 IAFDV----GPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT---------PLGRLGEAQDIANAALFLCSPA---- 236 (256)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHH----hhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHcCCc----
Confidence 64211 2257999999999998753211 0122233333222 2235788999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCCCCCh
Q 016468 162 PGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|+.+++.+|...++
T Consensus 237 -----~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 237 -----AAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp -----GTTCCSCEEEESTTSCCC-
T ss_pred -----ccCccCCEEEECCCccccC
Confidence 3445799999999877654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.46 E-value=4.4e-07 Score=84.09 Aligned_cols=138 Identities=13% Similarity=0.135 Sum_probs=90.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+ +.+. .+ ...|+.||+..|.+.+.
T Consensus 121 ~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~-~~~~-----------~~----~~~Y~asK~a~~~~~~~ 184 (273)
T 1ae1_A 121 KDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG-FSAL-----------PS----VSLYSASKGAINQMTKS 184 (273)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG-TSCC-----------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhh-cCCC-----------CC----cchhHHHHHHHHHHHHH
Confidence 3566788899999999999984 456789999999874 3221 11 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.... ...|+++.+++|+.|+++...... ......+....+ ...+.+.+|+|++++.++..
T Consensus 185 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~~l~s~ 251 (273)
T 1ae1_A 185 LACEW----AKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---------MGRAGKPQEVSALIAFLCFP 251 (273)
T ss_dssp HHHHH----GGGTEEEEEEEECSBC-------------CHHHHHHHHHHST---------TCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHH----hhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCc
Confidence 64210 125899999999999988543211 112222221111 12378899999999988751
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. .....|+.+++.+|..
T Consensus 252 ~---------~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 252 A---------ASYITGQIIWADGGFT 268 (273)
T ss_dssp G---------GTTCCSCEEEESTTGG
T ss_pred c---------ccCcCCCEEEECCCcc
Confidence 0 2345789999888754
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-07 Score=84.55 Aligned_cols=139 Identities=14% Similarity=0.090 Sum_probs=92.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+.+++|++||..+.++. + + ...|+.||+..|.+.+.
T Consensus 103 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~~sK~a~~~~~~~ 166 (247)
T 1uzm_A 103 EKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------G--N----QANYAASKAGVIGMARS 166 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------C----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC----------C--C----ChhHHHHHHHHHHHHHH
Confidence 35678899999999999998864 567899999998754331 1 1 46899999998888877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+................. ....+.+.+|+|++++.++...
T Consensus 167 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~----- 228 (247)
T 1uzm_A 167 IAREL----SKANVTANVVAPGYIDTDMTRALDERIQQGALQFI---------PAKRVGTPAEVAGVVSFLASED----- 228 (247)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGC---------TTCSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHh----hhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCcc-----
Confidence 54210 12579999999999976421111111111111111 1124789999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 229 ----~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 229 ----ASYISGAVIPVDGGMGM 245 (247)
T ss_dssp ----GTTCCSCEEEESTTTTC
T ss_pred ----ccCCcCCEEEECCCccc
Confidence 23457899999887543
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.1e-07 Score=88.47 Aligned_cols=158 Identities=10% Similarity=0.109 Sum_probs=100.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++... +-.++|++||..+ +.+....+..|..+..+ ...|+.||+..|.+.+.+.
T Consensus 119 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~-~~~~~~~~~~~~~~~~~----~~~Y~asK~a~~~~~~~la 193 (287)
T 3pxx_A 119 QAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG-LIAAAQPPGAGGPQGPG----GAGYSYAKQLVDSYTLQLA 193 (287)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH-HHHHHCCC-----CHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh-cccccccccccccCCCc----cchHHHHHHHHHHHHHHHH
Confidence 456789999999999999999876 3458999999885 33332333333333222 4689999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcC---CC-----cceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLG---LV-----PFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g---~~-----~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
... ...|+++.+++|+.|..+..... + ........ .. ............+.+.+|+|++++.++..
T Consensus 194 ~e~----~~~gi~vn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~ 267 (287)
T 3pxx_A 194 AQL----APQSIRANVIHPTNVNTDMLNSA-P-MYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASD 267 (287)
T ss_dssp HHH----GGGTCEEEEEEESSBSSTTTSSH-H-HHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred HHH----hhcCcEEEEEecCcccccccccc-c-hhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecch
Confidence 311 12489999999999998754321 1 11111100 00 00001111225689999999999988741
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
. ..-..|+.+++.+|..++
T Consensus 268 ~---------a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 268 E---------SRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp G---------GTTCCSCEEEESTTGGGG
T ss_pred h---------hcCCCCceEeECchhhhc
Confidence 1 345679999998886543
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=6.4e-07 Score=82.42 Aligned_cols=134 Identities=14% Similarity=0.160 Sum_probs=91.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+.+++|++||..+ +.+. + + ...|+.||+..|.+.+.
T Consensus 103 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~--~----~~~Y~~sK~a~~~~~~~ 166 (260)
T 1nff_A 103 TEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG-LAGT---------V--A----CHGYTATKFAVRGLTKS 166 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSCC---------T--T----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhh-cCCC---------C--C----chhHHHHHHHHHHHHHH
Confidence 356678999999996665554 5567889999999885 3211 1 1 46899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|++++++||+.|+++... . . ..... ......+.+.+|+|++++.++...
T Consensus 167 la~e~----~~~gi~v~~v~Pg~v~t~~~~-~-~--------~~~~~----~~~~~~~~~~~dvA~~v~~l~s~~----- 223 (260)
T 1nff_A 167 TALEL----GPSGIRVNSIHPGLVKTPMTD-W-V--------PEDIF----QTALGRAAEPVEVSNLVVYLASDE----- 223 (260)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCSGGGT-T-S--------CTTCS----CCSSSSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHh----CccCcEEEEEEeCCCCCCccc-c-c--------hhhHH----hCccCCCCCHHHHHHHHHHHhCcc-----
Confidence 64210 125899999999999987532 1 0 00000 111235789999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.|++.+|...
T Consensus 224 ----~~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 224 ----SSYSTGAEFVVDGGTVA 240 (260)
T ss_dssp ----GTTCCSCEEEESTTGGG
T ss_pred ----ccCCcCCEEEECCCeec
Confidence 22346899999888543
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.2e-07 Score=84.68 Aligned_cols=140 Identities=18% Similarity=0.175 Sum_probs=86.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+.+..+++|+.|+.++++++... + ..++|++||..+.++. + + ...|+.||+..|.+
T Consensus 131 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------~--~----~~~Y~asKaa~~~l 194 (280)
T 4da9_A 131 ENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS----------P--E----RLDYCMSKAGLAAF 194 (280)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------------------C----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC----------C--C----ccHHHHHHHHHHHH
Confidence 456778899999999999998654 2 4589999998753221 1 1 46899999999988
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.+.+.... ...|+++.+++|+.|..+......+........+ ......+...+|+|++++.++..
T Consensus 195 ~~~la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L~s~--- 259 (280)
T 4da9_A 195 SQGLALRL----AETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESG--------LVPMRRWGEPEDIGNIVAGLAGG--- 259 (280)
T ss_dssp HHHHHHHH----TTTTEEEEEEEECCBCC------------------------------CCBCHHHHHHHHHHHHTS---
T ss_pred HHHHHHHH----HHhCcEEEEEeecCCcCCchhhcchhHHHHHhhc--------CCCcCCcCCHHHHHHHHHHHhCc---
Confidence 88764211 2368999999999998775432222211111111 11223477899999999988851
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
......|+.+++.+|..+
T Consensus 260 ------~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 260 ------QFGFATGSVIQADGGLSI 277 (280)
T ss_dssp ------TTGGGTTCEEEESTTCC-
T ss_pred ------cccCCCCCEEEECCCccc
Confidence 023467999999887543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.43 E-value=7.3e-07 Score=80.81 Aligned_cols=111 Identities=15% Similarity=0.160 Sum_probs=82.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+.+++|++||..+ +.+ ..+ ...|+.||+..|.+++.
T Consensus 108 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 171 (244)
T 2bd0_A 108 EDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA-TKA-----------FRH----SSIYCMSKFGQRGLVET 171 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh-cCC-----------CCC----CchhHHHHHHHHHHHHH
Confidence 35677889999999999999854 46789999999874 321 111 47899999999998865
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|++++++||+.|+++...... . . . ...+++++|+|++++.++.
T Consensus 172 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~----------~------~-~-~~~~~~~~dva~~~~~l~~ 222 (244)
T 2bd0_A 172 MRLYA----RKCNVRITDVQPGAVYTPMWGKVD----------D------E-M-QALMMMPEDIAAPVVQAYL 222 (244)
T ss_dssp HHHHH----TTTTEEEEEEEECCBCSTTTCCCC----------S------T-T-GGGSBCHHHHHHHHHHHHT
T ss_pred HHHHh----hccCcEEEEEECCCccchhhhhcc----------c------c-c-cccCCCHHHHHHHHHHHHh
Confidence 53110 236899999999999998544210 0 0 0 2368999999999999986
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=98.43 E-value=4.9e-07 Score=82.01 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=93.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++. +.+.+++|++||..+ +.+.. ..+ ...|+.||+..|.+.+.
T Consensus 92 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~~---------~~~----~~~Y~~sK~a~~~~~~~ 157 (239)
T 2ekp_A 92 EEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT-FTAGG---------PVP----IPAYTTAKTALLGLTRA 157 (239)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSCCT---------TSC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh-ccCCC---------CCC----CccHHHHHHHHHHHHHH
Confidence 3567889999999999999884 457889999999874 33210 011 57899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|++++++||+.|+++..... .+.....+.... ....+.+.+|+|++++.++...
T Consensus 158 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~---------p~~~~~~~~dvA~~~~~l~s~~--- 221 (239)
T 2ekp_A 158 LAKEW----ARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARI---------PMGRWARPEEIARVAAVLCGDE--- 221 (239)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHTSGG---
T ss_pred HHHHh----hhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCch---
Confidence 64210 12589999999999987642210 022222222211 1124789999999999887510
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 222 ------~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 222 ------AEYLTGQAVAVDGGF 236 (239)
T ss_dssp ------GTTCCSCEEEESTTT
T ss_pred ------hcCCCCCEEEECCCc
Confidence 234578888887764
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.42 E-value=1e-06 Score=81.89 Aligned_cols=143 Identities=16% Similarity=0.077 Sum_probs=94.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++.. .+ -.++|++||..+..+ ... ...|+.||+..|.+.+
T Consensus 127 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~ 190 (280)
T 3pgx_A 127 EQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA------------TPG----NGHYSASKHGLTALTN 190 (280)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC------------CTT----BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC------------CCC----chhHHHHHHHHHHHHH
Confidence 35567889999999999999854 33 568999999875221 111 4789999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCc---ceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP---FKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~---~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.+.... ...|+++.+++|+.|+++.... ............. ..... .....+.+++|+|++++.++...
T Consensus 191 ~la~e~----~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~p~dvA~~v~~L~s~~- 262 (280)
T 3pgx_A 191 TLAIEL----GEYGIRVNSIHPYSVETPMIEP--EAMMEIFARHPSFVHSFPPMP-VQPNGFMTADEVADVVAWLAGDG- 262 (280)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCSTTCCH--HHHHHHHHHCGGGGGGSCCBT-TBCSSCBCHHHHHHHHHHHHSGG-
T ss_pred HHHHHh----hhcCeEEEEEeeCcccCcccch--hhhhhhhhcCchhhhhhhhcc-cCCCCCCCHHHHHHHHHHHhCcc-
Confidence 764211 2258999999999999886542 1122222111110 00111 11224899999999999887521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 263 --------~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 263 --------SGTLTGTQIPVDKGA 277 (280)
T ss_dssp --------GTTCSSCEEEESTTG
T ss_pred --------ccCCCCCEEEECCCc
Confidence 334579999987774
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.1e-07 Score=84.57 Aligned_cols=138 Identities=12% Similarity=0.064 Sum_probs=96.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+.+..+++|+.++.++++++... +-.++|++||..+..+ ..+ ...|+.||+..+
T Consensus 132 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~ 195 (281)
T 3ppi_A 132 GFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEG------------QIG----QTAYAAAKAGVI 195 (281)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCC------------CCC----CcccHHHHHHHH
Confidence 35788999999999999998743 3348999999885211 111 478999999888
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.+.+.... ...|+++.+++|+.|..+-................+. ...+.+.+|+|++++.++.
T Consensus 196 ~~~~~la~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~~~~pedvA~~v~~l~s-- 261 (281)
T 3ppi_A 196 GLTIAAARDL----SSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPF--------PKRLGTPDEFADAAAFLLT-- 261 (281)
T ss_dssp HHHHHHHHHH----GGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCS--------SSSCBCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHH----hhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHHc--
Confidence 8877654211 2257999999999997652222223333333333221 1347899999999999987
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 262 ---------~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 262 ---------NGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp ---------CSSCCSCEEEESTTCCCC
T ss_pred ---------CCCcCCcEEEECCCcccC
Confidence 456789999999887654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.42 E-value=1e-07 Score=90.63 Aligned_cols=153 Identities=15% Similarity=0.142 Sum_probs=104.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC----------CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI----------QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv----------krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+..+++|+.|+.++++++...-. .++|++||..+..+. .. ...|+.||+..
T Consensus 136 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~------------~~----~~~Y~asKaal 199 (322)
T 3qlj_A 136 EEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS------------VG----QGNYSAAKAGI 199 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB------------TT----CHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC------------CC----CccHHHHHHHH
Confidence 35677899999999999999865421 489999998753321 01 46899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
|.+.+.+.... ...|+++.+++|+ +..+-......... ..+.....++..+|++++++.++..
T Consensus 200 ~~l~~~la~e~----~~~gI~vn~v~PG-~~t~~~~~~~~~~~------------~~~~~~~~~~~pedva~~v~~L~s~ 262 (322)
T 3qlj_A 200 ATLTLVGAAEM----GRYGVTVNAIAPS-ARTRMTETVFAEMM------------ATQDQDFDAMAPENVSPLVVWLGSA 262 (322)
T ss_dssp HHHHHHHHHHH----GGGTEEEEEEEEC-TTSCCSCCSCCC--------------------CCTTCGGGTHHHHHHHTSG
T ss_pred HHHHHHHHHHh----cccCcEEEEecCC-CCCccchhhhhhhh------------hccccccCCCCHHHHHHHHHHHhCc
Confidence 99888764211 2258999999998 65443221111100 1112234567899999999988752
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCC-----------------ChHHHHHHHHHhCCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPI-----------------NTFEFIGPLLKTLDYDLP 201 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~-----------------s~~e~~~~l~~~lg~~~~ 201 (389)
. .....|+.+++.+|... +..|+++.+.+.+|.+.+
T Consensus 263 ~---------~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~ 315 (322)
T 3qlj_A 263 E---------ARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARP 315 (322)
T ss_dssp G---------GGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCC
T ss_pred c---------ccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCC
Confidence 1 23457999999887654 779999999999886544
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=98.42 E-value=3.8e-07 Score=83.83 Aligned_cols=146 Identities=10% Similarity=-0.008 Sum_probs=90.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++. +.+.+++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 107 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 170 (260)
T 2z1n_A 107 EDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL-LRP-----------WQD----LALSNIMRLPVIGVVRT 170 (260)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSC-----------CTT----BHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh-cCC-----------CCC----CchhHHHHHHHHHHHHH
Confidence 3567789999999966666664 567889999999874 321 111 46899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHH--HHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS--LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~--~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|+++........... ..........+........+.+.+|+|++++.++...
T Consensus 171 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~--- 243 (260)
T 2z1n_A 171 LALEL----APHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEK--- 243 (260)
T ss_dssp HHHHH----GGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGG---
T ss_pred HHHHH----hhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc---
Confidence 64211 12589999999999999864411000000 0000000000011111234789999999999887521
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 244 ------~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 244 ------ASFITGAVIPVDGGA 258 (260)
T ss_dssp ------GTTCCSCEEEESTTT
T ss_pred ------ccCCCCCEEEeCCCc
Confidence 234578999887774
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.2e-07 Score=83.19 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=99.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... + -.++|++||..+.++. ..+.. ....|+.||+..|.+.+
T Consensus 120 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~~~~~----~~~~Y~asKaa~~~~~~ 187 (278)
T 3sx2_A 120 DGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGV--------GSADP----GSVGYVAAKHGVVGLMR 187 (278)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC--------CCSSH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCC--------ccCCC----CchHhHHHHHHHHHHHH
Confidence 466789999999999999998643 2 4689999998853321 01111 14689999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHH-HHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVS-LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~-~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.+.... ...|+++.+++|+.|+++...... ...+. ...........++... ..+.+.+|+|++++.++...
T Consensus 188 ~la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~-- 260 (278)
T 3sx2_A 188 VYANLL----AGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQ-- 260 (278)
T ss_dssp HHHHHH----GGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGG--
T ss_pred HHHHHH----hccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcc--
Confidence 764211 225799999999999988654322 12221 2222221222233333 57899999999999887521
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 261 -------~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 261 -------ARYITGVTLPVDAGF 275 (278)
T ss_dssp -------GTTCCSCEEEESTTT
T ss_pred -------cccccCCEEeECCCc
Confidence 334679999998774
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.41 E-value=4.4e-07 Score=82.71 Aligned_cols=138 Identities=10% Similarity=0.090 Sum_probs=93.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||..+ +.+. + .+ ...|+.||+..|.+.+.
T Consensus 96 ~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~-~~----~~~Y~~sK~a~~~~~~~ 160 (246)
T 2ag5_A 96 KDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS-SVKG---------V-VN----RCVYSTTKAAVIGLTKS 160 (246)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT-TTBC---------C-TT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHh-CcCC---------C-CC----CccHHHHHHHHHHHHHH
Confidence 34567889999999999999863 46789999999874 2211 1 01 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.... .+.|++++++||+.|++|..... ............ ....+.+.+|+|++++.++..
T Consensus 161 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dvA~~v~~l~s~ 227 (246)
T 2ag5_A 161 VAADF----IQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQ---------KTGRFATAEEIAMLCVYLASD 227 (246)
T ss_dssp HHHHH----GGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTC---------TTSSCEEHHHHHHHHHHHHSG
T ss_pred HHHHh----hhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCc
Confidence 64210 12589999999999998742210 111222222211 112478999999999988752
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
. .....|+.+++.+|.
T Consensus 228 ~---------~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 228 E---------SAYVTGNPVIIDGGW 243 (246)
T ss_dssp G---------GTTCCSCEEEECTTG
T ss_pred c---------ccCCCCCEEEECCCc
Confidence 1 234578999887774
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.4e-07 Score=81.60 Aligned_cols=136 Identities=16% Similarity=0.125 Sum_probs=91.2
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+++. +.+.+++|++||..+.++. | + ...|+.||+..+.+.+.+
T Consensus 105 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asK~a~~~~~~~l 168 (246)
T 2uvd_A 105 EWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN----------P--G----QANYVAAKAGVIGLTKTS 168 (246)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T--T----BHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC----------C--C----CchHHHHHHHHHHHHHHH
Confidence 456789999999777776664 4577899999998754431 1 1 468999999998887765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...|+++.+++|+.|..+.................+ ...+.+.+|+|++++.++...
T Consensus 169 a~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p---------~~~~~~~~dvA~~~~~l~s~~------ 229 (246)
T 2uvd_A 169 AKEL----ASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIP---------AAQFGEAQDIANAVTFFASDQ------ 229 (246)
T ss_dssp HHHH----GGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCT---------TCSCBCHHHHHHHHHHHHSGG------
T ss_pred HHHh----hhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCch------
Confidence 3210 125899999999999887433211111222222111 124789999999999887510
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 230 ---~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 230 ---SKYITGQTLNVDGGM 244 (246)
T ss_dssp ---GTTCCSCEEEESTTS
T ss_pred ---hcCCCCCEEEECcCc
Confidence 234578999888774
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=9.7e-07 Score=81.42 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=95.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHH-----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL-----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~-----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+.++. .+ ...|+.||+..+.+.+
T Consensus 126 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asKaa~~~~~~ 189 (267)
T 4iiu_A 126 DDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN------------RG----QVNYSAAKAGIIGATK 189 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC------------TT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC------------CC----CchhHHHHHHHHHHHH
Confidence 4567889999999999999984 5567799999998764431 11 4789999997777766
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...|+++.+++|+.|..+..... +..........+. ..+.+.+|+|+++..++...
T Consensus 190 ~la~e~----~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~p~---------~~~~~~edva~~~~~L~s~~---- 251 (267)
T 4iiu_A 190 ALAIEL----AKRKITVNCIAPGLIDTGMIEME-ESALKEAMSMIPM---------KRMGQAEEVAGLASYLMSDI---- 251 (267)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCSTTCCCC-HHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHHH----hhcCeEEEEEEEeeecCCccccc-HHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCCc----
Confidence 553211 22589999999999998865433 3344444333221 23678999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+++.+|
T Consensus 252 -----~~~itG~~i~vdGG 265 (267)
T 4iiu_A 252 -----AGYVTRQVISINGG 265 (267)
T ss_dssp -----GTTCCSCEEEESTT
T ss_pred -----ccCccCCEEEeCCC
Confidence 34567999988776
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=2.7e-07 Score=86.51 Aligned_cols=139 Identities=17% Similarity=0.118 Sum_probs=96.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++... ...++|++||..+..+. .. ...|+.||+..|.+.+.+.
T Consensus 148 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asKaa~~~l~~~la 211 (291)
T 3ijr_A 148 EQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN------------ET----LIDYSATKGAIVAFTRSLS 211 (291)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC------------TT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC------------CC----ChhHHHHHHHHHHHHHHHH
Confidence 456789999999999999999876 23589999998853221 11 4789999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC-CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
... ...|+++.+++|+.|+++.... .-...... +........+.+.+|+|++++.++...
T Consensus 212 ~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r~~~p~dvA~~v~~L~s~~------ 272 (291)
T 3ijr_A 212 QSL----VQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---------FGSNVPMQRPGQPYELAPAYVYLASSD------ 272 (291)
T ss_dssp HHH----GGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---------TTTTSTTSSCBCGGGTHHHHHHHHSGG------
T ss_pred HHH----hhcCEEEEEEeeCCCcCCcccccCCHHHHHH---------HHccCCCCCCcCHHHHHHHHHHHhCCc------
Confidence 211 1258999999999998763210 00111111 112223345788999999999887521
Q ss_pred CCCCCCCCCceEEEeCCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 273 ---~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 273 ---SSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp ---GTTCCSCEEEESSSCCC
T ss_pred ---cCCCcCCEEEECCCccc
Confidence 33467999999887654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=98.40 E-value=9.2e-07 Score=80.77 Aligned_cols=137 Identities=12% Similarity=0.073 Sum_probs=96.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+.++. .+ ...|+.||+..+.+.+.
T Consensus 105 ~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asK~a~~~l~~~ 168 (248)
T 3op4_A 105 EEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN------------AG----QANYAAAKAGVIGFTKS 168 (248)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC------------CC----ChHHHHHHHHHHHHHHH
Confidence 45677899999999999999864 566799999998754321 11 47899999988888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+-.....+.......... ....+.+.+|+|+++..++...
T Consensus 169 la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~----- 230 (248)
T 3op4_A 169 MAREV----ASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQV---------PAGRLGDPREIASAVAFLASPE----- 230 (248)
T ss_dssp HHHHH----GGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTC---------TTCSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHcCCc-----
Confidence 54211 12589999999999987754433333333333222 1234788999999998887521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 231 ----~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 231 ----AAYITGETLHVNGGM 245 (248)
T ss_dssp ----GTTCCSCEEEESTTS
T ss_pred ----cCCccCcEEEECCCe
Confidence 334579999998775
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=98.40 E-value=3.2e-07 Score=85.09 Aligned_cols=140 Identities=12% Similarity=0.064 Sum_probs=95.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+-.++|++||..+..+. .+ ...|+.||+..+.+.+.
T Consensus 127 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asKaa~~~l~~~ 190 (270)
T 3ftp_A 127 DEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN------------PG----QVNYAAAKAGVAGMTRA 190 (270)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------TT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC------------CC----chhHHHHHHHHHHHHHH
Confidence 45677899999999999999863 455689999998753321 11 47899999988888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+................. ....+.+.+|+|++++.++...
T Consensus 191 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v~~L~s~~----- 252 (270)
T 3ftp_A 191 LAREI----GSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQI---------PLGRLGSPEDIAHAVAFLASPQ----- 252 (270)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----hhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcC---------CCCCCCCHHHHHHHHHHHhCCC-----
Confidence 54211 12589999999999976522211122222222222 2234788999999999887411
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 253 ----~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 253 ----AGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp ----GTTCCSCEEEESTTSSCC
T ss_pred ----cCCccCcEEEECCCcccC
Confidence 345679999998886543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.40 E-value=3.2e-07 Score=85.21 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=96.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 128 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 191 (273)
T 3uf0_A 128 GRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQG------------GRN----VAAYAASKHAVVGLTRA 191 (273)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------CSS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCC------------CCC----ChhHHHHHHHHHHHHHH
Confidence 3567789999999999999884 457789999999875221 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|+++..... .+.....+....+ ...+.+.+|+|++++.++...
T Consensus 192 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~v~~L~s~~--- 255 (273)
T 3uf0_A 192 LASEW----AGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP---------AGRWATPEDMVGPAVFLASDA--- 255 (273)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST---------TSSCBCGGGGHHHHHHHHSGG---
T ss_pred HHHHH----hhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC---------CCCCCCHHHHHHHHHHHhCch---
Confidence 65211 12589999999999998743211 1122222222221 124678999999999887521
Q ss_pred CCCCCCCCCCCCceEEEeCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 256 ------a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 256 ------ASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp ------GTTCCSCEEEESTTGGG
T ss_pred ------hcCCcCCEEEECcCccC
Confidence 34567999999888654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.40 E-value=4.3e-07 Score=84.01 Aligned_cols=137 Identities=10% Similarity=0.094 Sum_probs=90.8
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+..++|++||..+.++. .+ ...|+.||+..+.+.+.
T Consensus 123 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~----~~~Y~asKaa~~~~~~~ 186 (266)
T 3grp_A 123 QDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN------------PG----QTNYCAAKAGLIGFSKA 186 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------------------C----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC------------CC----chhHHHHHHHHHHHHHH
Confidence 456788999999966666665 44677899999998753321 11 47899999988888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|.++......+.....+..+.+ ...+.+.+|+|++++.++...
T Consensus 187 la~e~----~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p---------~~r~~~~edvA~~v~~L~s~~----- 248 (266)
T 3grp_A 187 LAQEI----ASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIP---------MKRMGIGEEIAFATVYLASDE----- 248 (266)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHh----hhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCcc-----
Confidence 54211 125899999999999876332222333333333322 234678999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 249 ----~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 249 ----AAYLTGQTLHINGGM 263 (266)
T ss_dssp ----GTTCCSCEEEESTTC
T ss_pred ----ccCccCCEEEECCCe
Confidence 334579999998774
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=8.6e-07 Score=81.52 Aligned_cols=139 Identities=14% Similarity=0.098 Sum_probs=97.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 104 ~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~l~~~ 167 (258)
T 3oid_A 104 THWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS-IRY-----------LEN----YTTVGVSKAALEALTRY 167 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG-TSB-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh-CCC-----------CCC----cHHHHHHHHHHHHHHHH
Confidence 3456789999999999999984 445679999999875 211 111 57899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|..+..... -...........+ ...+.+.+|+|++++.++..
T Consensus 168 la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~v~~L~s~---- 230 (258)
T 3oid_A 168 LAVEL----SPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP---------AGRMVEIKDMVDTVEFLVSS---- 230 (258)
T ss_dssp HHHHT----GGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT---------TSSCBCHHHHHHHHHHHTSS----
T ss_pred HHHHH----hhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCc----
Confidence 65321 23589999999999987643321 1233333333221 13478899999999988751
Q ss_pred CCCCCCCCCCCCceEEEeCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
......|+.+++.+|...
T Consensus 231 -----~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 231 -----KADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp -----TTTTCCSCEEEESTTGGG
T ss_pred -----ccCCccCCEEEECCCccC
Confidence 134567999999888643
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.39 E-value=8.1e-07 Score=81.79 Aligned_cols=137 Identities=12% Similarity=0.007 Sum_probs=91.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++++++... +..++|++||..+..+ ..+ ...|+.||+..|.+++
T Consensus 123 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~----~~~Y~~sKaa~~~~~~ 186 (266)
T 3o38_A 123 EEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA------------QHS----QSHYAAAKAGVMALTR 186 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC------------CCC----CchHHHHHHHHHHHHH
Confidence 356778999999999999999765 5568999999875211 111 5789999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.+.... ...|+++.+++|+.|..+...... ....... ........+.+.+|+|++++.++...
T Consensus 187 ~la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~dva~~i~~l~s~~--- 250 (266)
T 3o38_A 187 CSAIEA----VEFGVRINAVSPSIARHKFLEKTSSSELLDRL---------ASDEAFGRAAEPWEVAATIAFLASDY--- 250 (266)
T ss_dssp HHHHHH----GGGTEEEEEEEECCCCC--------------------------CCTTSSCCCHHHHHHHHHHHHSGG---
T ss_pred HHHHHH----HHcCcEEEEEeCCcccchhhhccCcHHHHHHH---------HhcCCcCCCCCHHHHHHHHHHHcCcc---
Confidence 764211 125899999999999876433211 1111111 12223345789999999999888521
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 251 ------~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 251 ------SSYMTGEVVSVSSQR 265 (266)
T ss_dssp ------GTTCCSCEEEESSCC
T ss_pred ------ccCccCCEEEEcCCc
Confidence 345679999998774
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.3e-06 Score=80.20 Aligned_cols=142 Identities=11% Similarity=-0.030 Sum_probs=95.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHH-----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL-----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~-----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++. +.+..++|++||..+..+ .+ . ...|+.||+..+.+.+
T Consensus 105 ~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~--~----~~~Y~asKaa~~~l~~ 168 (257)
T 3imf_A 105 NGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA----------GP--G----VIHSAAAKAGVLAMTK 168 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC----------CT--T----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC----------CC--C----cHHHHHHHHHHHHHHH
Confidence 3567789999999999999983 344679999999875211 11 1 4689999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH---HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL---PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~---~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
.+..... +..|+++.+++|+.|.++...... +.+....... .....+...+|+|++++.++...
T Consensus 169 ~la~e~~---~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~~- 235 (257)
T 3imf_A 169 TLAVEWG---RKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS---------VPLGRLGTPEEIAGLAYYLCSDE- 235 (257)
T ss_dssp HHHHHHH---HHHCCEEEEEEECCBSSCCCC-------CCSHHHHTT---------STTCSCBCHHHHHHHHHHHHSGG-
T ss_pred HHHHHhc---cccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCch-
Confidence 7642100 024799999999999988543211 1111111111 11234788999999999887521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCCh
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|+.+++.+|..++.
T Consensus 236 --------~~~itG~~i~vdGG~~~~~ 254 (257)
T 3imf_A 236 --------AAYINGTCMTMDGGQHLHQ 254 (257)
T ss_dssp --------GTTCCSCEEEESTTTTSCC
T ss_pred --------hcCccCCEEEECCCcccCC
Confidence 2345799999998876653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.8e-07 Score=84.92 Aligned_cols=139 Identities=11% Similarity=0.045 Sum_probs=95.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC--eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ--RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk--rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++.....+ ++|++||..+ +.+ ... ...|+.||+..|.+.+.+.
T Consensus 151 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~l~~~la 214 (294)
T 3r3s_A 151 EQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA-YQP-----------SPH----LLDYAATKAAILNYSRGLA 214 (294)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh-ccC-----------CCC----chHHHHHHHHHHHHHHHHH
Confidence 355788999999999999999887544 9999999885 321 111 4789999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|+++... ...... ...+........+...+|+|++++.++...
T Consensus 215 ~e~----~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---------~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~----- 276 (294)
T 3r3s_A 215 KQV----AEKGIRVNIVAPGPIWTALQISGGQTQDK---------IPQFGQQTPMKRAGQPAELAPVYVYLASQE----- 276 (294)
T ss_dssp HHH----GGGTCEEEEEEECSBCSHHHHTTTSCGGG---------STTTTTTSTTSSCBCGGGGHHHHHHHHSGG-----
T ss_pred HHH----hhcCeEEEEEecCcCccccccccCCCHHH---------HHHHHhcCCCCCCcCHHHHHHHHHHHhCcc-----
Confidence 211 225899999999999875310 000000 111122223345788999999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+++++.+|..+
T Consensus 277 ----~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 277 ----SSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp ----GTTCCSCEEEESTTCCC
T ss_pred ----ccCCCCCEEEECCCccC
Confidence 34567999999988754
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.4e-06 Score=79.93 Aligned_cols=140 Identities=14% Similarity=0.093 Sum_probs=91.6
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
..+.+..+++|+.|+.++++++.. .+..++|++||..+.++. + ....|+.||+..|.+.+
T Consensus 108 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~------~~~~Y~asK~a~~~~~~ 171 (253)
T 2nm0_A 108 EEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS----------A------GQANYAASKAGLVGFAR 171 (253)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH----------H------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC----------C------CcHHHHHHHHHHHHHHH
Confidence 356778899999999999998764 467899999998752211 0 13689999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...++++.+++|+.|..+................. ....+++.+|+|++++.++...
T Consensus 172 ~la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------p~~~~~~p~dvA~~i~~l~s~~---- 234 (253)
T 2nm0_A 172 SLAREL----GSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQV---------PLGRYARPEEIAATVRFLASDD---- 234 (253)
T ss_dssp HHHHHH----CSSSEEEEEEEECSBCC---------CHHHHHTTC---------TTCSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHHh----hhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCcc----
Confidence 654211 23689999999999876532211111111111111 1124789999999999888521
Q ss_pred CCCCCCCCCCCceEEEeCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+.+.+|..+
T Consensus 235 -----~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 235 -----ASYITGAVIPVDGGLGM 251 (253)
T ss_dssp -----GTTCCSCEEEESTTTTC
T ss_pred -----ccCCcCcEEEECCcccc
Confidence 23457899988877543
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.36 E-value=7.6e-07 Score=82.15 Aligned_cols=138 Identities=17% Similarity=0.077 Sum_probs=95.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.|+.++++++...- ..++|++||..+ ++ .+ + ...|+.||+..+.+.+.+..
T Consensus 103 ~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~-~~-~~-----------~----~~~Y~asK~a~~~~~~~la~ 165 (263)
T 2a4k_A 103 AWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-LG-AF-----------G----LAHYAAGKLGVVGLARTLAL 165 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-CC-HH-----------H----HHHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh-cC-CC-----------C----cHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999998753 359999999874 32 11 1 46899999988877766532
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
.. ...|+++.+++|+.|.++......+..........+. ..+.+.+|+|++++.++...
T Consensus 166 e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dvA~~v~~l~s~~-------- 224 (263)
T 2a4k_A 166 EL----ARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPL---------GRAGRPEEVAQAALFLLSEE-------- 224 (263)
T ss_dssp HH----TTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTT---------CSCBCHHHHHHHHHHHHSGG--------
T ss_pred Hh----hhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc--------
Confidence 10 2368999999999999875433223333333322211 23688999999999887521
Q ss_pred CCCCCCCceEEEeCCCCCC
Q 016468 166 GRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..+.
T Consensus 225 -~~~~tG~~i~vdgG~~~~ 242 (263)
T 2a4k_A 225 -SAYITGQALYVDGGRSIV 242 (263)
T ss_dssp -GTTCCSCEEEESTTTTTC
T ss_pred -ccCCcCCEEEECCCcccc
Confidence 234578999998886554
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.36 E-value=7.4e-07 Score=80.69 Aligned_cols=112 Identities=12% Similarity=0.032 Sum_probs=74.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----------C-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----------G-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGR 71 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----------g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~ 71 (389)
.+.+..+++|+.++.++++++... + ..++|++||..+.++.. .+..+.. +...|+.
T Consensus 104 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----~~~~~~~----~~~~Y~~ 174 (250)
T 1yo6_A 104 AVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN-----TSGSAQF----PVLAYRM 174 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC-----CSTTSSS----CBHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc-----ccccccC----CccHHHH
Confidence 345678999999999999998654 5 78999999987533321 1111111 2578999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 72 SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
||+..|.+++.+.... .+.|+++.+++|+.|.++.... ..+++.+|+|++++
T Consensus 175 sK~a~~~~~~~la~e~----~~~gi~v~~v~Pg~v~t~~~~~------------------------~~~~~~~~~a~~~~ 226 (250)
T 1yo6_A 175 SKAAINMFGRTLAVDL----KDDNVLVVNFCPGWVQTNLGGK------------------------NAALTVEQSTAELI 226 (250)
T ss_dssp HHHHHHHHHHHHHHHT----GGGTCEEEEEECCCC-------------------------------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----ccCCeEEEEEcCCceecCCCCC------------------------CCCCCHHHHHHHHH
Confidence 9999999998765321 2247999999999997653221 13578999999999
Q ss_pred HHHh
Q 016468 152 LASM 155 (389)
Q Consensus 152 ~a~~ 155 (389)
.++.
T Consensus 227 ~~~~ 230 (250)
T 1yo6_A 227 SSFN 230 (250)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9986
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.35 E-value=5e-07 Score=83.33 Aligned_cols=148 Identities=9% Similarity=-0.031 Sum_probs=92.4
Q ss_pred CcchhhhHhhhhHHHHH----HHHHHHcC---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHV----IEACLEFG---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nl----l~aa~~~g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+.+..+++|+.++.++ ++.+++.+ .+++|++||..+ +.+. + + ...|+.||+..|.+
T Consensus 100 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~---------~--~----~~~Y~~sK~a~~~~ 163 (267)
T 2gdz_A 100 KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG-LMPV---------A--Q----QPVYCASKHGIVGF 163 (267)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG-TSCC---------T--T----CHHHHHHHHHHHHH
T ss_pred hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc-cCCC---------C--C----CchHHHHHHHHHHH
Confidence 45678899999966554 44554443 579999999874 3211 1 1 46899999999988
Q ss_pred HHHhC-CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCc---ceecCCCccccceeHHHHHHHHHHHHh
Q 016468 80 VLKSN-GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP---FKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 80 l~~~~-~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~---~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.+. ...+ ...|+++.+++|+.|.++........ ... +... .....+.....+++.+|+|++++.++.
T Consensus 164 ~~~~ala~e~---~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s 236 (267)
T 2gdz_A 164 TRSAALAANL---MNSGVRLNAICPGFVNTAILESIEKE--ENM--GQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE 236 (267)
T ss_dssp HHHHHHHHHH---HTCCEEEEEEEESCBSSHHHHGGGCH--HHH--GGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---ccCCcEEEEEecCcCcchhhhccccc--ccc--chhhhHHHHHHHHhccccCCCHHHHHHHHHHHhc
Confidence 87521 0000 12689999999999976521110000 000 0000 000000112347899999999999987
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHH
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEF 188 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~ 188 (389)
.+...|+++++.+++.+++.|+
T Consensus 237 -----------~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 237 -----------DDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp -----------CTTCSSCEEEEETTTEEEECCC
T ss_pred -----------CcCCCCcEEEecCCCcccccCc
Confidence 3447899999999988776654
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.5e-06 Score=79.46 Aligned_cols=137 Identities=12% Similarity=0.112 Sum_probs=93.6
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++. +.+..++|++||..+..+ ..+ ...|+.||+..|.+.+.+
T Consensus 96 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~~l 159 (254)
T 1zmt_A 96 DYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP------------WKE----LSTYTSARAGACTLANAL 159 (254)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC------------CTT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC------------CCC----chHHHHHHHHHHHHHHHH
Confidence 457789999999999999885 446679999999875221 111 478999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHH-------HHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRI-------VSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~l-------i~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++++++|+.|+||...... ..+ ........ ....+.+.+|+|++++.++.
T Consensus 160 a~e~----~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~---------p~~~~~~p~dvA~~v~~l~s 226 (254)
T 1zmt_A 160 SKEL----GEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT---------ALQRLGTQKELGELVAFLAS 226 (254)
T ss_dssp HHHH----GGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS---------SSSSCBCHHHHHHHHHHHHT
T ss_pred HHHh----hhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccC---------CCCCCcCHHHHHHHHHHHhC
Confidence 4211 225799999999999988654321 111 11111111 11236789999999998885
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. ......|+.+++.+|..
T Consensus 227 ~---------~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 227 G---------SCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp T---------SCGGGTTCEEEESTTCC
T ss_pred c---------ccCCccCCEEEECCCch
Confidence 1 02345789998877753
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=80.24 Aligned_cols=138 Identities=13% Similarity=0.081 Sum_probs=87.4
Q ss_pred CcchhhhHhhhhHHHHHHHH----HHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEA----CLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~a----a~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.++ +++.+.+++|++||..+ +.+. .+ ...|+.||+..|.+.+.
T Consensus 104 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~-----------~~----~~~Y~asK~a~~~~~~~ 167 (249)
T 2ew8_A 104 EQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY-WLKI-----------EA----YTHYISTKAANIGFTRA 167 (249)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-GSCC-----------SS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh-ccCC-----------CC----chhHHHHHHHHHHHHHH
Confidence 34567899999998888888 45567789999999874 3211 11 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++.+++|+.|.++... ...... ..... ... .....+.+.+|+|++++.++...
T Consensus 168 la~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~-~~~------~~~~~~~~p~dva~~~~~l~s~~---- 231 (249)
T 2ew8_A 168 LASDL----GKDGITVNAIAPSLVRTATTEASALSAM-FDVLP-NML------QAIPRLQVPLDLTGAAAFLASDD---- 231 (249)
T ss_dssp HHHHH----GGGTEEEEEEEECCC--------------------CTT------SSSCSCCCTHHHHHHHHHHTSGG----
T ss_pred HHHHH----HhcCcEEEEEecCcCcCccchhccccch-hhHHH-Hhh------CccCCCCCHHHHHHHHHHHcCcc----
Confidence 64211 125899999999999887432 111000 00000 000 11234789999999999987510
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 232 -----~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 232 -----ASFITGQTLAVDGGM 246 (249)
T ss_dssp -----GTTCCSCEEEESSSC
T ss_pred -----cCCCCCcEEEECCCc
Confidence 234578999887774
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.35 E-value=8.8e-07 Score=81.86 Aligned_cols=137 Identities=17% Similarity=0.145 Sum_probs=91.9
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCc-eecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYN-VVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~-vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.|+.++++++. +.+.+++|++||.. ... +..+ ...|+.||+..|.+.+.
T Consensus 122 ~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~~----~~~Y~asK~a~~~~~~~ 185 (267)
T 1vl8_A 122 EFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV------------TMPN----ISAYAASKGGVASLTKA 185 (267)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC------------CSSS----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc------------CCCC----ChhHHHHHHHHHHHHHH
Confidence 456788999999999999885 35678999999976 211 1111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|..+...... +..........+ ...+.+.+|+|++++.++...
T Consensus 186 la~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~~~~~p~dvA~~v~~l~s~~--- 249 (267)
T 1vl8_A 186 LAKEW----GRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP---------LGRTGVPEDLKGVAVFLASEE--- 249 (267)
T ss_dssp HHHHH----GGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT---------TSSCBCGGGGHHHHHHHHSGG---
T ss_pred HHHHh----cccCeEEEEEEeccCccccccccccChHHHHHHHhhCC---------CCCCcCHHHHHHHHHHHcCcc---
Confidence 64210 125799999999999876432111 122222222211 123788999999999887521
Q ss_pred CCCCCCCCCCCCceEEEeCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 250 ------~~~itG~~i~vdGG~~ 265 (267)
T 1vl8_A 250 ------AKYVTGQIIFVDGGWT 265 (267)
T ss_dssp ------GTTCCSCEEEESTTGG
T ss_pred ------ccCCcCCeEEECCCCC
Confidence 2345789998887754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-06 Score=79.18 Aligned_cols=138 Identities=19% Similarity=0.132 Sum_probs=89.8
Q ss_pred CcchhhhHhhhhHHHH----HHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCH----VIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~n----ll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.+ +++.+++.+.+++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 101 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~ 164 (254)
T 1hdc_A 101 ERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG-LMG-----------LAL----TSSYGASKWGVRGLSKL 164 (254)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh-ccC-----------CCC----chhHHHHHHHHHHHHHH
Confidence 3567789999999975 445555667889999999875 221 011 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccce-eHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWI-YVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v-~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++.++||+.|+++.. ..... ..............+. +.+|+|++++.++...
T Consensus 165 la~e~----~~~gi~v~~v~Pg~v~t~~~--------~~~~~-~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~---- 227 (254)
T 1hdc_A 165 AAVEL----GTDRIRVNSVHPGMTYTPMT--------AETGI-RQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT---- 227 (254)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHH--------HHHTC-CCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG----
T ss_pred HHHHh----hhcCeEEEEEecccCcCccc--------cccch-hHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch----
Confidence 64211 12579999999999987521 11111 1000011111112367 9999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 228 -----~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 228 -----SSYVTGAELAVDGGWT 243 (254)
T ss_dssp -----GTTCCSCEEEESTTTT
T ss_pred -----hcCCCCCEEEECCCcc
Confidence 2345789998887753
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.34 E-value=2.6e-06 Score=77.57 Aligned_cols=136 Identities=16% Similarity=0.072 Sum_probs=94.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+++... +..++|++||.. .++.. . ...|+.||+..+.+.+..
T Consensus 100 ~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~------------~----~~~Y~asK~a~~~~~~~l 162 (245)
T 1uls_A 100 DWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL------------G----QANYAASMAGVVGLTRTL 162 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT------------T----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCC------------C----chhHHHHHHHHHHHHHHH
Confidence 45678899999999999998754 678999999987 55421 1 468999999998887765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... ...|+++.+++|+.|..+......+..........+. ..+.+.+|+|++++.++...
T Consensus 163 a~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~---------~~~~~~~dvA~~v~~l~s~~------ 223 (245)
T 1uls_A 163 ALEL----GRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL---------GRAGKPLEVAYAALFLLSDE------ 223 (245)
T ss_dssp HHHH----GGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGG------
T ss_pred HHHH----hHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCC---------CCCcCHHHHHHHHHHHhCch------
Confidence 4211 1258999999999998775433222222222222111 13688999999999887521
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 224 ---~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 224 ---SSFITGQVLFVDGGRT 239 (245)
T ss_dssp ---GTTCCSCEEEESTTTT
T ss_pred ---hcCCcCCEEEECCCcc
Confidence 2345789998887754
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.34 E-value=9.2e-07 Score=81.71 Aligned_cols=141 Identities=11% Similarity=0.120 Sum_probs=95.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++.. .+..++|++||..+..+. .+ ...|+.||+..+.+.+.
T Consensus 125 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asKaa~~~~~~~ 188 (269)
T 3gk3_A 125 GDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA------------FG----QANYASAKAGIHGFTKT 188 (269)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------TT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC------------CC----cchHHHHHHHHHHHHHH
Confidence 45677899999999999999854 566799999998753321 11 47899999988888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|..+........... .. .........+.+.+|+|+++..++..
T Consensus 189 la~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~----~~----~~~~~~~~~~~~p~dvA~~v~~L~s~------ 250 (269)
T 3gk3_A 189 LALET----AKRGITVNTVSPGYLATAMVEAVPQDVLE----AK----ILPQIPVGRLGRPDEVAALIAFLCSD------ 250 (269)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCTTTTC-----------CC----SGGGCTTSSCBCHHHHHHHHHHHTST------
T ss_pred HHHHh----hhcCCEEEEEecCcccchhhhhhchhHHH----HH----hhhcCCcCCccCHHHHHHHHHHHhCC------
Confidence 54211 22589999999999987754432211111 01 11112223567899999999988751
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
......|+.+++.+|..++
T Consensus 251 ---~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 251 ---DAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp ---TCTTCCSCEEEESTTSCCC
T ss_pred ---CcCCeeCcEEEECCCEeCc
Confidence 1344679999999887654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-06 Score=80.75 Aligned_cols=146 Identities=14% Similarity=0.088 Sum_probs=94.6
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+. . ..+..+ ...|+.||+..|.+.+.
T Consensus 128 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~-~---------~~~~~~----~~~Y~asKaa~~~l~~~ 193 (283)
T 3v8b_A 128 FEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGT-R---------TFTTPG----ATAYTATKAAQVAIVQQ 193 (283)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-T---------BCCSTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhc-c---------CCCCCC----chHHHHHHHHHHHHHHH
Confidence 345678999999999999999 55677899999997741 1 011111 57899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCcc--ccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVK--TDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~--~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|..+........- . ................ ..+...+|+|++++.++...
T Consensus 194 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~-~-~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~--- 264 (283)
T 3v8b_A 194 LALEL----GKHHIRVNAVCPGAIETNISDNTKLRH-E-EETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER--- 264 (283)
T ss_dssp HHHHT----TTTTEEEEEEEECSBSSCTTCCTTBCC-H-HHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGG---
T ss_pred HHHHh----CccCcEEEEEEeCCCcCCccccccccc-c-hhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcc---
Confidence 65321 236899999999999877543211000 0 0000001111111111 34678999999999887511
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 265 ------a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 265 ------ARHVTGSPVWIDGGQ 279 (283)
T ss_dssp ------GTTCCSCEEEESTTH
T ss_pred ------ccCCcCCEEEECcCc
Confidence 345679999887774
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.32 E-value=5.1e-07 Score=84.76 Aligned_cols=138 Identities=14% Similarity=0.035 Sum_probs=93.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.+++++|... +.+++|++||.. .++. + . ...|+.||+..+.+.+.+
T Consensus 123 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~----------~--~----~~~Y~~sK~a~~~~~~~l 185 (303)
T 1yxm_A 123 GWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGF----------P--L----AVHSGAARAGVYNLTKSL 185 (303)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCC----------T--T----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCC----------C--c----chhhHHHHHHHHHHHHHH
Confidence 45678999999999999998762 357899999976 3321 1 1 468999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCC-CCCH---HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGE-ERHL---PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~-~~~~---~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.... ...|++++++||+.|+|+.. .... +.....+... .....+.+++|+|++++.++...
T Consensus 186 a~e~----~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~~dvA~~i~~l~~~~-- 250 (303)
T 1yxm_A 186 ALEW----ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK---------IPAKRIGVPEEVSSVVCFLLSPA-- 250 (303)
T ss_dssp HHHT----GGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG---------STTSSCBCTHHHHHHHHHHHSGG--
T ss_pred HHHh----cccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc---------CcccCCCCHHHHHHHHHHHhCcc--
Confidence 4311 12489999999999999842 1110 1111111100 11124789999999999988521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 251 -------~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 251 -------ASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp -------GTTCCSCEEEESTTGGGC
T ss_pred -------cccCCCcEEEECCCeecc
Confidence 234578999999887654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.1e-06 Score=81.83 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=92.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHH------cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE------FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~------~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+.+..+++|+.|+.++++++.. .+..++|++||..+..+ ..+ ...|+.||+..+.+.+
T Consensus 124 ~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~ 187 (279)
T 3sju_A 124 LWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG------------VMY----AAPYTASKHGVVGFTK 187 (279)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC------------CCC----ChhHHHHHHHHHHHHH
Confidence 4567888999999999999865 46679999999875211 111 4689999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC-----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLAL 150 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~ 150 (389)
.+.... ...|+++.+++|+.|.++.... ............. ....+.+++|+|+++
T Consensus 188 ~la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~pedvA~~v 254 (279)
T 3sju_A 188 SVGFEL----AKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---------PLGRYSTPEEVAGLV 254 (279)
T ss_dssp HHHHHT----GGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC---------TTSSCBCHHHHHHHH
T ss_pred HHHHHH----HhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC---------CCCCCCCHHHHHHHH
Confidence 764321 2358999999999997652110 1122222222222 223478899999999
Q ss_pred HHHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 151 ILASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 151 ~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+.++... .....|+.+++.+|.
T Consensus 255 ~~L~s~~---------a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 255 GYLVTDA---------AASITAQALNVCGGL 276 (279)
T ss_dssp HHHTSSG---------GGGCCSCEEEESTTC
T ss_pred HHHhCcc---------ccCcCCcEEEECCCc
Confidence 9887510 234679999998774
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.5e-07 Score=83.22 Aligned_cols=144 Identities=14% Similarity=0.085 Sum_probs=92.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CC-CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GI-QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gv-krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... +. .++|++||..+..+ ..+ ...|+.||+..|.+.+
T Consensus 103 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~ 166 (258)
T 3a28_C 103 EDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG------------FPI----LSAYSTTKFAVRGLTQ 166 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC------------CCC----chhHHHHHHHHHHHHH
Confidence 356778999999999999998763 66 79999999875221 111 4689999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHH-H-cCC--C--cceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLA-K-LGL--V--PFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~-~-~g~--~--~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.... ...|+++.+++|+.|..+... ...... . .+. . ...+........+.+.+|+|++++.++.
T Consensus 167 ~la~e~----~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s 238 (258)
T 3a28_C 167 AAAQEL----APKGHTVNAYAPGIVGTGMWE----QIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLAS 238 (258)
T ss_dssp HHHHHH----GGGTCEEEEEEECCBCSHHHH----HHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHH----HhhCeEEEEEECCccCChhhh----hhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC
Confidence 764211 125799999999999754211 101000 0 000 0 0000011111247899999999999885
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.. .....|+.+++.+|..+
T Consensus 239 ~~---------~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 239 EN---------SNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp GG---------GTTCCSCEEEESSSSCC
T ss_pred cc---------cCCCCCCEEEECCCEec
Confidence 21 23457899998887644
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.31 E-value=7.3e-07 Score=81.78 Aligned_cols=145 Identities=14% Similarity=0.037 Sum_probs=87.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQ 78 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~ 78 (389)
.+.+..+++|+.++.++++++...- ..++|++||..+ +.+ ... ...|+.||+..|.
T Consensus 106 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~ 169 (261)
T 3n74_A 106 EEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA-GRP-----------RPN----LAWYNATKGWVVS 169 (261)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTT-TSC-----------CTT----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhh-cCC-----------CCC----ccHHHHHHHHHHH
Confidence 3556788999999999999886432 346999999874 211 111 4679999999999
Q ss_pred HHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 79 LVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 79 ~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+.+.+.... ...++++.+++|+.|..+............. ...+.+......+++.+|+|++++.++...
T Consensus 170 ~~~~la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~dva~~~~~l~s~~- 239 (261)
T 3n74_A 170 VTKALAIEL----APAKIRVVALNPVAGETPLLTTFMGEDSEEI-----RKKFRDSIPMGRLLKPDDLAEAAAFLCSPQ- 239 (261)
T ss_dssp HHHHHHHHH----GGGTEEEEEEEEC------------------------------CTTSSCCCHHHHHHHHHHHTSGG-
T ss_pred HHHHHHHHh----hhcCcEEEEEecCcccChhhhhhcccCcHHH-----HHHHhhcCCcCCCcCHHHHHHHHHHHcCCc-
Confidence 888765311 2257999999999998774432211100000 011112223346899999999999887521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCCh
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|+.+++.+|..++-
T Consensus 240 --------~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 240 --------ASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp --------GTTCCSCEEEESTTTTC--
T ss_pred --------ccCcCCcEEEecCCcccCC
Confidence 3456799999999887654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.30 E-value=5.7e-07 Score=82.93 Aligned_cols=137 Identities=18% Similarity=0.131 Sum_probs=94.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++++++... + .++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 111 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~~ 173 (264)
T 3ucx_A 111 EHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS------------QAK----YGAYKMAKSALLAMSQT 173 (264)
T ss_dssp HHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC------------CCc----cHHHHHHHHHHHHHHHH
Confidence 356778999999999999988643 3 59999999875221 111 46899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-----------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-----------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-----------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+.... ...|+++.+++|+.|+++...... ..+......+ .....+.+.+|+|++++
T Consensus 174 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~ 240 (264)
T 3ucx_A 174 LATEL----GEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAG---------SDLKRLPTEDEVASAIL 240 (264)
T ss_dssp HHHHH----HTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTT---------SSSSSCCBHHHHHHHHH
T ss_pred HHHHh----CccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhcc---------CCcccCCCHHHHHHHHH
Confidence 64211 136899999999999876432111 1222222222 22345789999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.++... .....|+.+++.+|..
T Consensus 241 ~L~s~~---------~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 241 FMASDL---------ASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHSGG---------GTTCCSCEEEESTTSS
T ss_pred HHcCcc---------ccCCCCCEEEECCCcc
Confidence 887521 3456799999988864
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.8e-06 Score=79.00 Aligned_cols=136 Identities=10% Similarity=0.070 Sum_probs=91.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+ .++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 101 ~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~------------~~~----~~~Y~asK~a~~~~~~~ 163 (254)
T 3kzv_A 101 NAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY------------FSS----WGAYGSSKAALNHFAMT 163 (254)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS------------SCC----SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC------------CCC----cchHHHHHHHHHHHHHH
Confidence 355778999999999999999 4555 79999999875211 111 47899999999999988
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC---------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
+... -.++++.+++|+.|..+-.... .+.......... ....+.+.+|++++++.+
T Consensus 164 la~e------~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~r~~~p~dva~~v~~L 228 (254)
T 3kzv_A 164 LANE------ERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK---------ENNQLLDSSVPATVYAKL 228 (254)
T ss_dssp HHHH------CTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH---------TTC----CHHHHHHHHHH
T ss_pred HHhh------ccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH---------hcCCcCCcccHHHHHHHH
Confidence 7642 1579999999999988743321 123333222221 112467899999999988
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+.... .....|+.+++.+++.
T Consensus 229 ~s~~~--------~~~itG~~i~vdg~~~ 249 (254)
T 3kzv_A 229 ALHGI--------PDGVNGQYLSYNDPAL 249 (254)
T ss_dssp HHHCC--------CGGGTTCEEETTCGGG
T ss_pred Hhhcc--------cCCCCccEEEecCccc
Confidence 76210 1336789888776654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.29 E-value=4.7e-07 Score=85.12 Aligned_cols=154 Identities=12% Similarity=-0.000 Sum_probs=98.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++... + .++|++||..+ +.+. .+ + ...|+.||+..|.+.+.
T Consensus 130 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~-~~~~--------~~--~----~~~Y~asKaa~~~l~~~ 193 (297)
T 1xhl_A 130 ELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVA-GPQA--------HS--G----YPYYACAKAALDQYTRC 193 (297)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGG-SSSC--------CT--T----SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchh-ccCC--------CC--C----cchHHHHHHHHHHHHHH
Confidence 346778999999999999998753 4 79999999874 2211 01 1 46899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HH--H--HHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LP--R--IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~--~--li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.... ...|+++.+++|+.|.++..... .. . .-....... .......+...+|+|++++.++..
T Consensus 194 la~el----~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~r~~~pedvA~~v~~l~s~ 263 (297)
T 1xhl_A 194 TAIDL----IQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK------ECIPVGHCGKPEEIANIIVFLADR 263 (297)
T ss_dssp HHHHH----GGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT------TTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred HHHHh----cccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHH------hcCCCCCCcCHHHHHHHHHHHhCC
Confidence 64210 12589999999999987632111 00 0 000111100 001112478999999999988751
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHH
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLK 194 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~ 194 (389)
.. .....|+.+++.+|..+...+....+.+
T Consensus 264 ~~--------~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 264 NL--------SSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp HH--------HTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred cc--------cCCccCcEEEECCCccccccccccchhh
Confidence 00 1135789999988877766664444433
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.29 E-value=1.5e-06 Score=79.68 Aligned_cols=142 Identities=14% Similarity=0.097 Sum_probs=98.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++... .-.++|++||..+..+ ..+ ...|+.||+..+.+.+.+.
T Consensus 104 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~~la 167 (255)
T 4eso_A 104 ASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGG------------HPG----MSVYSASKAALVSFASVLA 167 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSB------------CTT----BHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCC------------CCC----chHHHHHHHHHHHHHHHHH
Confidence 456778999999999999999875 2348999999875221 111 4789999999999888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHH----HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLP----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~----~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
... ...|+++.+++|+.|..|.... ... .+........+ ...+.+.+|+|++++.++..
T Consensus 168 ~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~-- 232 (255)
T 4eso_A 168 AEL----LPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP---------MKRNGTADEVARAVLFLAFE-- 232 (255)
T ss_dssp HHT----GGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST---------TSSCBCHHHHHHHHHHHHHT--
T ss_pred HHH----hhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCc--
Confidence 321 2358999999999999875431 111 12222222111 12367899999999888752
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHH
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
.....|+.+++.+|...++.+
T Consensus 233 --------~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 233 --------ATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp --------CTTCCSCEEEESTTTTTTBCC
T ss_pred --------CcCccCCEEEECCCccccCcC
Confidence 234579999999987766543
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.2e-06 Score=79.63 Aligned_cols=137 Identities=13% Similarity=0.133 Sum_probs=90.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCC----CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCC-cHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGI----QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVD-SYGRSKSVAE 77 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gv----krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~-~Y~~SK~~aE 77 (389)
.+.+..+++|+.|+.++++++. +.+. +++|++||..+ +.+. + . .. .|+.||+..|
T Consensus 127 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~-~~~~---------~--~----~~~~Y~asK~a~~ 190 (276)
T 2b4q_A 127 SGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG-ISAM---------G--E----QAYAYGPSKAALH 190 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG-TCCC---------C--C----SCTTHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH-cCCC---------C--C----CccccHHHHHHHH
Confidence 3456789999999988888875 3344 79999999874 3211 1 1 24 8999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc--CCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL--GLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~--g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.+.+.... ...|+++.+++|+.|..+............... .. ....+.+.+|+|++++.++.
T Consensus 191 ~~~~~la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~l~s 257 (276)
T 2b4q_A 191 QLSRMLAKEL----VGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASI---------PMGRWGRPEEMAALAISLAG 257 (276)
T ss_dssp HHHHHHHHHH----GGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTS---------TTSSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHh----cccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCC---------CCCCcCCHHHHHHHHHHHhC
Confidence 9888764211 125899999999999876432111111111111 11 11247899999999999885
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.. .....|+.+++.+|.
T Consensus 258 ~~---------~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 258 TA---------GAYMTGNVIPIDGGF 274 (276)
T ss_dssp GG---------GTTCCSCEEEESTTT
T ss_pred cc---------ccCCCCCEEEeCCCc
Confidence 21 234578999887774
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=4.2e-06 Score=77.84 Aligned_cols=140 Identities=14% Similarity=-0.009 Sum_probs=93.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+..+. + . ....|+.||+..|.+.+.+.
T Consensus 129 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~-~----~~~~Y~asK~a~~~~~~~la 193 (283)
T 1g0o_A 129 EEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------V-P----KHAVYSGSKGAIETFARCMA 193 (283)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------C-S----SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------C-C----CCcchHHHHHHHHHHHHHHH
Confidence 456778999999999999999986 66799999997742110 0 0 14689999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC-----------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH-----------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-----------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
... ...|+++.+++|+.|.++..... .+.....+.... ......+.+.+|+|++++.+
T Consensus 194 ~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~r~~~p~dvA~~v~~l 262 (283)
T 1g0o_A 194 IDM----ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ-------WSPLRRVGLPIDIARVVCFL 262 (283)
T ss_dssp HHH----GGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH-------SCTTCSCBCHHHHHHHHHHH
T ss_pred HHh----cccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc-------CCCCCCCcCHHHHHHHHHHH
Confidence 210 12589999999999987521100 011222222100 01112478899999999998
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+... .....|+.+++.+|.
T Consensus 263 ~s~~---------~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 263 ASND---------GGWVTGKVIGIDGGA 281 (283)
T ss_dssp HSGG---------GTTCCSCEEEESTTC
T ss_pred hCcc---------ccCcCCCEEEeCCCc
Confidence 8521 234578999887774
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.28 E-value=8.6e-07 Score=80.62 Aligned_cols=138 Identities=10% Similarity=0.014 Sum_probs=93.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++...-. .++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+.
T Consensus 92 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~-----------~~~----~~~Y~asKaa~~~~~~~la 155 (244)
T 4e4y_A 92 ESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC-FIA-----------KPN----SFAYTLSKGAIAQMTKSLA 155 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG-TCC-----------CTT----BHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH-ccC-----------CCC----CchhHHHHHHHHHHHHHHH
Confidence 35677899999999999999987633 38999999875 211 111 4689999999999988765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHH-----------HHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPR-----------IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~-----------li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
... ...|+++.+++|+.|..+........ ........ .....+.+.+|+|++++.+
T Consensus 156 ~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~p~dvA~~v~~l 222 (244)
T 4e4y_A 156 LDL----AKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE---------FPLNRIAQPQEIAELVIFL 222 (244)
T ss_dssp HHH----GGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT---------STTSSCBCHHHHHHHHHHH
T ss_pred HHH----HHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc---------CCCCCCcCHHHHHHHHHHH
Confidence 211 13589999999999976532211111 11111111 2223578899999999998
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+... .....|+.+++.+|..
T Consensus 223 ~s~~---------~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 223 LSDK---------SKFMTGGLIPIDGGYT 242 (244)
T ss_dssp HSGG---------GTTCCSCEEEESTTGG
T ss_pred hcCc---------cccccCCeEeECCCcc
Confidence 8521 3346799999887753
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.27 E-value=2e-06 Score=80.16 Aligned_cols=142 Identities=12% Similarity=0.098 Sum_probs=98.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+ +. .+..+ ...|+.||+..|.+.+.
T Consensus 108 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~----------~~~~~----~~~Y~asKaa~~~l~~~ 172 (280)
T 3tox_A 108 EGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVG-HT----------AGFAG----VAPYAASKAGLIGLVQA 172 (280)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBT-TT----------BCCTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh-Cc----------CCCCC----chhHHHHHHHHHHHHHH
Confidence 45678899999999999999864 35569999999874 21 01111 47899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC----CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER----HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~----~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
+.... ...|+++.+++|+.|.++.... ..+.....+....+ ...+.+.+|+|++++.++...
T Consensus 173 la~e~----~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s~~- 238 (280)
T 3tox_A 173 LAVEL----GARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---------LKRIARPEEIAEAALYLASDG- 238 (280)
T ss_dssp HHHHH----HTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------TSSCBCHHHHHHHHHHHHSGG-
T ss_pred HHHHh----hhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------cCCCcCHHHHHHHHHHHhCcc-
Confidence 64211 2358999999999999875432 12233333333221 234788999999999888521
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCCh
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|+++++.+|..++.
T Consensus 239 --------a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 239 --------ASFVTGAALLADGGASVTK 257 (280)
T ss_dssp --------GTTCCSCEEEESTTGGGCC
T ss_pred --------ccCCcCcEEEECCCccccc
Confidence 3456799999998876553
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=6.4e-07 Score=81.88 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=88.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.+.+..+++|+.|+.++++++.... ..++|++||..+ +.+ ..+ ...|+.||+..|.+
T Consensus 98 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~ 161 (254)
T 1sby_A 98 HQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG-FNA-----------IHQ----VPVYSASKAAVVSF 161 (254)
T ss_dssp TCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG-TSC-----------CTT----SHHHHHHHHHHHHH
T ss_pred HHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh-ccC-----------CCC----chHHHHHHHHHHHH
Confidence 4677899999999999999997542 357999999874 321 111 46899999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC---H--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---L--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
.+.+... + ...|+++++++|+.|.++..... . ...+..... ...+.+++|+|++++.++
T Consensus 162 ~~~la~~-~---~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~dvA~~i~~~~ 225 (254)
T 1sby_A 162 TNSLAKL-A---PITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL------------SHPTQTSEQCGQNFVKAI 225 (254)
T ss_dssp HHHHHHH-H---HHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT------------TSCCEEHHHHHHHHHHHH
T ss_pred HHHHHHH-h---ccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh------------cCCCCCHHHHHHHHHHHH
Confidence 8876421 0 11479999999999987621110 0 000011110 112358999999999988
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
+. ...|+.|++.+|
T Consensus 226 ~~------------~~~G~~~~v~gG 239 (254)
T 1sby_A 226 EA------------NKNGAIWKLDLG 239 (254)
T ss_dssp HH------------CCTTCEEEEETT
T ss_pred Hc------------CCCCCEEEEeCC
Confidence 61 246889999887
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=1.1e-06 Score=80.75 Aligned_cols=144 Identities=13% Similarity=0.024 Sum_probs=99.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++...- -.++|++||..+..+ ..+ ...|+.||+..|.+.+.+.
T Consensus 119 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~~la 182 (271)
T 3ek2_A 119 ENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA------------IPN----YNTMGLAKAALEASVRYLA 182 (271)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB------------CTT----TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC------------CCC----ccchhHHHHHHHHHHHHHH
Confidence 4567789999999999999998752 348999999875221 111 5789999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|..+...... +..........+. ..+...+|+|++++.++...
T Consensus 183 ~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedva~~i~~l~s~~----- 244 (271)
T 3ek2_A 183 VSL----GAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQVGNAGAFLLSDL----- 244 (271)
T ss_dssp HHH----HTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGG-----
T ss_pred HHH----HhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHcCcc-----
Confidence 211 235899999999999887554332 3344444333221 23577999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCCCCChHHH
Q 016468 163 GQKGRPIASGQPYFVSDGFPINTFEF 188 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s~~e~ 188 (389)
.....|+.+++.+|..++..|+
T Consensus 245 ----~~~~tG~~i~vdgG~~~~~~~~ 266 (271)
T 3ek2_A 245 ----ASGVTAEVMHVDSGFNAVVGGM 266 (271)
T ss_dssp ----GTTCCSEEEEESTTGGGBCCCC
T ss_pred ----cCCeeeeEEEECCCeeeehhhh
Confidence 3456899999999987776654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.26 E-value=2e-06 Score=80.02 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=93.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 125 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 188 (277)
T 3gvc_A 125 EDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA------------VGG----TGAYGMSKAGIIQLSRI 188 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC------------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC------------CCC----chhHHHHHHHHHHHHHH
Confidence 45678899999999999999865 45678999999875221 111 47899999999998886
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+++.+++|+.|++|.........-............ ......+.+.+|+|++++.++...
T Consensus 189 la~e~----~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~pedvA~~v~~L~s~~----- 257 (277)
T 3gvc_A 189 TAAEL----RSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMI--ARLQGRMAAPEEMAGIVVFLLSDD----- 257 (277)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHH--HHHHSSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHh----cccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhh--hccccCCCCHHHHHHHHHHHcCCc-----
Confidence 54211 2258999999999998752110000000000000000000 001124788999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|...+
T Consensus 258 ----a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 258 ----ASMITGTTQIADGGTIAA 275 (277)
T ss_dssp ----GTTCCSCEEEESTTGGGS
T ss_pred ----cCCccCcEEEECCcchhc
Confidence 345679999998886554
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.26 E-value=2.5e-06 Score=78.66 Aligned_cols=140 Identities=15% Similarity=0.106 Sum_probs=91.1
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+.+++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 115 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asK~a~~~~~~~ 178 (267)
T 1iy8_A 115 AEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG------------IGN----QSGYAAAKHGVVGLTRN 178 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB------------CSS----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccC------------CCC----CccHHHHHHHHHHHHHH
Confidence 356678899999988766655 4557789999999875221 111 47899999999988876
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC--------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
+.... ...|+++.+++|+.|+++... .........+... .....+.+.+|+|++++.++
T Consensus 179 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dvA~~v~~l~ 245 (267)
T 1iy8_A 179 SAVEY----GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV---------NPSKRYGEAPEIAAVVAFLL 245 (267)
T ss_dssp HHHHH----GGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHT
T ss_pred HHHHH----HhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc---------CCCCCCcCHHHHHHHHHHHc
Confidence 54210 125899999999999875211 0001111111111 11124789999999999887
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
... .....|+.+++.+|...+
T Consensus 246 s~~---------~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 246 SDD---------ASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp SGG---------GTTCCSCEEEESTTTTTB
T ss_pred Ccc---------ccCCCCCEEEECCCcccC
Confidence 511 234578999988876543
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.25 E-value=2.6e-06 Score=78.76 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=94.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.|+.++++++... +..++|++||..+.++. + . ...|+.||+..|.+.+.+.
T Consensus 106 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asKaa~~~~~~~la 169 (270)
T 1yde_A 106 GFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----------A--Q----AVPYVATKGAVTAMTKALA 169 (270)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC----------T--T----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC----------C--C----CcccHHHHHHHHHHHHHHH
Confidence 35778899999999999999642 34799999998754431 1 1 4689999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
... ...|+++.+++|+.|+++.... .....+.......+ ...+...+|+++++..++..
T Consensus 170 ~e~----~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dva~~v~~L~s~-- 234 (270)
T 1yde_A 170 LDE----SPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP---------LGRMGQPAEVGAAAVFLASE-- 234 (270)
T ss_dssp HHH----GGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHHH--
T ss_pred HHh----hhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC---------CCCCcCHHHHHHHHHHHccc--
Confidence 210 1258999999999999863110 00001111111111 12367899999999888752
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHH
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEF 188 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~ 188 (389)
.....|+.+++.+|..+.+.+.
T Consensus 235 --------~~~itG~~i~vdGG~~~~~~~~ 256 (270)
T 1yde_A 235 --------ANFCTGIELLVTGGAELGYGCK 256 (270)
T ss_dssp --------CTTCCSCEEEESTTTTSCC---
T ss_pred --------CCCcCCCEEEECCCeecccCcC
Confidence 2345799999998877665443
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.8e-06 Score=79.00 Aligned_cols=140 Identities=16% Similarity=0.171 Sum_probs=94.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 123 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~l~~~ 186 (277)
T 4dqx_A 123 ETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA-TSA-----------IAD----RTAYVASKGAISSLTRA 186 (277)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh-CcC-----------CCC----ChhHHHHHHHHHHHHHH
Confidence 35567888999999999998854 45569999999875 211 111 47899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.... ...|+++.+++|+.|..+... ............ ......+.+.+|+|++++.++..
T Consensus 187 la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~r~~~pedvA~~v~~L~s~ 253 (277)
T 4dqx_A 187 MAMDH----AKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNA---------RAVMDRMGTAEEIAEAMLFLASD 253 (277)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHT---------TSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHh----hhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHh---------cCcccCCcCHHHHHHHHHHHhCC
Confidence 64211 125799999999999765200 001111111221 12223477899999999988752
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
. .....|+.+++.+|..++
T Consensus 254 ~---------~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 254 R---------SRFATGSILTVDGGSSIG 272 (277)
T ss_dssp G---------GTTCCSCEEEESSSSSSC
T ss_pred c---------cCCCcCCEEEECCchhhh
Confidence 1 334579999998887654
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.24 E-value=2.5e-06 Score=78.86 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=91.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||..+..+. .+ ...|+.||+..|.+++.
T Consensus 129 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asK~a~~~~~~~ 192 (271)
T 4iin_A 129 EDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN------------MG----QTNYSASKGGMIAMSKS 192 (271)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------TT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC------------CC----chHhHHHHHHHHHHHHH
Confidence 35678899999999999888854 466799999998753221 11 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+..+. ...++++.+++|+.|..+............ .........+.+.+|+|+++..++...
T Consensus 193 la~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~---------~~~~~~~~~~~~p~dvA~~i~~l~s~~----- 254 (271)
T 4iin_A 193 FAYEG----ALRNIRFNSVTPGFIETDMNANLKDELKAD---------YVKNIPLNRLGSAKEVAEAVAFLLSDH----- 254 (271)
T ss_dssp HHHHH----HTTTEEEEEEEECSBCCC---------------------CGGGCTTCSCBCHHHHHHHHHHHHSGG-----
T ss_pred HHHHH----HHhCcEEEEEEeCcccCCchhhhcHHHHHH---------HHhcCCcCCCcCHHHHHHHHHHHhCCC-----
Confidence 64210 126899999999999876433211111111 111122235789999999999888521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|-
T Consensus 255 ----~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 255 ----SSYITGETLKVNGGL 269 (271)
T ss_dssp ----GTTCCSCEEEESTTS
T ss_pred ----cCCCcCCEEEeCCCe
Confidence 334679999998875
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=80.57 Aligned_cols=146 Identities=14% Similarity=0.150 Sum_probs=90.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+..+++|+.|+.++++++... + ..++|++||..+.++. + + ...|+.||+..|.+.+.
T Consensus 102 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asK~a~~~~~~~ 165 (256)
T 1geg_A 102 IVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN----------P--E----LAVYSSSKFAVRGLTQT 165 (256)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------T--T----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC----------C--C----chhHHHHHHHHHHHHHH
Confidence 45678999999999988888653 4 6799999998753321 1 1 46899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHH--cCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK--LGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~--~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|.++........+..... .......+........+.+.+|+|++++.++...
T Consensus 166 la~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~--- 238 (256)
T 1geg_A 166 AARDL----APLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD--- 238 (256)
T ss_dssp HHHHH----GGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG---
T ss_pred HHHHH----HHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc---
Confidence 64210 12589999999999987531110000000000 0000000001111224789999999999887521
Q ss_pred CCCCCCCCCCCCceEEEeCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 239 ------~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 239 ------SDYMTGQSLLIDGGMV 254 (256)
T ss_dssp ------GTTCCSCEEEESSSSS
T ss_pred ------ccCCCCCEEEeCCCcc
Confidence 2345789998887754
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.23 E-value=3.8e-06 Score=77.69 Aligned_cols=136 Identities=14% Similarity=0.126 Sum_probs=93.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++.. .+..++|++||..+ +.+. .+ ...|+.||+..|.+.+.+
T Consensus 104 ~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~~-----------~~----~~~Y~asKaa~~~l~~~l 167 (269)
T 3vtz_A 104 IWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS-YAAT-----------KN----AAAYVTSKHALLGLTRSV 167 (269)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSBC-----------TT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh-ccCC-----------CC----ChhHHHHHHHHHHHHHHH
Confidence 4567888999999999998764 46779999999885 3221 11 478999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC-----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.... . .++++.+++|+.|+++.... ............ .....+.+.+|+|++++.
T Consensus 168 a~e~----~-~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~ 233 (269)
T 3vtz_A 168 AIDY----A-PKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ---------HPMGRIGRPEEVAEVVAF 233 (269)
T ss_dssp HHHH----T-TTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH---------STTSSCBCHHHHHHHHHH
T ss_pred HHHh----c-CCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHHH
Confidence 5321 1 37999999999998752110 011222222221 122357789999999998
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
++... .....|+.+++.+|..
T Consensus 234 L~s~~---------~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 234 LASDR---------SSFITGACLTVDGGLL 254 (269)
T ss_dssp HHSGG---------GTTCCSCEEEESTTGG
T ss_pred HhCCc---------cCCCcCcEEEECCCcc
Confidence 87521 3456799999988753
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=81.56 Aligned_cols=140 Identities=15% Similarity=0.175 Sum_probs=95.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 125 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 188 (271)
T 4ibo_A 125 ADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA------------RAT----VAPYTVAKGGIKMLTRA 188 (271)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC------------CCC----chhHHHHHHHHHHHHHH
Confidence 45677899999999999888765 35679999999875221 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+.... ...|+++.+++|+.|..+...... +.....+....+. ..+.+.+|+|++++.++...
T Consensus 189 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedva~~v~~L~s~~--- 252 (271)
T 4ibo_A 189 MAAEW----AQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA---------KRWGKPQELVGTAVFLSASA--- 252 (271)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT---------CSCBCGGGGHHHHHHHHSGG---
T ss_pred HHHHH----hhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCcc---
Confidence 64211 225899999999999876432111 1223333322221 23677899999998887521
Q ss_pred CCCCCCCCCCCCceEEEeCCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|...+
T Consensus 253 ------~~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 253 ------SDYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp ------GTTCCSCEEEESTTGGGB
T ss_pred ------ccCCCCcEEEECCCeecc
Confidence 335679999998886543
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.3e-06 Score=80.54 Aligned_cols=136 Identities=17% Similarity=0.070 Sum_probs=90.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+.+++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 96 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 159 (264)
T 2dtx_A 96 GEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA-SII-----------TKN----ASAYVTSKHAVIGLTKS 159 (264)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh-ccC-----------CCC----chhHHHHHHHHHHHHHH
Confidence 35678899999999999998875 35679999999874 321 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-------H----HHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-------P----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-------~----~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+.... ... +++.+++|+.|.++...... . ......... .....+++++|+|++++
T Consensus 160 la~e~----~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~~~~~p~dvA~~v~ 225 (264)
T 2dtx_A 160 IALDY----APL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE---------HPMQRIGKPQEVASAVA 225 (264)
T ss_dssp HHHHH----TTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH---------STTSSCBCHHHHHHHHH
T ss_pred HHHHh----cCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc---------CCCCCCcCHHHHHHHHH
Confidence 64211 123 89999999999764211000 0 111111111 11235889999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.++... .....|+.+++.+|.
T Consensus 226 ~l~s~~---------~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 226 FLASRE---------ASFITGTCLYVDGGL 246 (264)
T ss_dssp HHHSGG---------GTTCCSCEEEESTTG
T ss_pred HHhCch---------hcCCCCcEEEECCCc
Confidence 888521 234578999888774
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-05 Score=73.53 Aligned_cols=139 Identities=15% Similarity=0.099 Sum_probs=96.4
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++ ++.+..++|++||..+.++.. .. ....|+.||+..|.+++.
T Consensus 123 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~----~~~~Y~~sK~a~~~~~~~ 188 (267)
T 3gdg_A 123 EAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF----------PQ----EQTSYNVAKAGCIHMARS 188 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS----------SS----CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC----------CC----CCCcchHHHHHHHHHHHH
Confidence 456778999999999999998 455677999999987533210 01 147899999999999987
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... . ..+++.++.|+.|..+-.....+.......... ....+.+.+|++++++.++..
T Consensus 189 la~e~----~-~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~r~~~~~dva~~~~~l~s~------ 248 (267)
T 3gdg_A 189 LANEW----R-DFARVNSISPGYIDTGLSDFVPKETQQLWHSMI---------PMGRDGLAKELKGAYVYFASD------ 248 (267)
T ss_dssp HHHHT----T-TTCEEEEEEECCEECSCGGGSCHHHHHHHHTTS---------TTSSCEETHHHHHHHHHHHST------
T ss_pred HHHHh----c-cCcEEEEEECCccccchhhhCCHHHHHHHHhcC---------CCCCCcCHHHHHhHhheeecC------
Confidence 75321 1 228999999999976543322233333333322 223578899999999988751
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
......|+.+++.+|..
T Consensus 249 ---~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 249 ---ASTYTTGADLLIDGGYT 265 (267)
T ss_dssp ---TCTTCCSCEEEESTTGG
T ss_pred ---ccccccCCEEEECCcee
Confidence 13456799999988754
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.4e-06 Score=77.63 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=70.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++.+++.. .+ .++|++||..+ +.+. .+ ...|+.||+..|.+.+.+
T Consensus 98 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~-~~~~-----------~~----~~~Y~asK~a~~~~~~~l 160 (245)
T 3e9n_A 98 EWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAG-NGPH-----------PG----NTIYAASKHALRGLADAF 160 (245)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC--------------------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccc-ccCC-----------CC----chHHHHHHHHHHHHHHHH
Confidence 4567889999998888888753 34 68999999875 3211 11 478999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++.+++|+.|.++........ . +.......+++.+|+|++++.+++
T Consensus 161 a~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~----~---------~~~~~~~~~~~p~dvA~~i~~l~~ 215 (245)
T 3e9n_A 161 RKEE----ANNGIRVSTVSPGPTNTPMLQGLMDS----Q---------GTNFRPEIYIEPKEIANAIRFVID 215 (245)
T ss_dssp HHHH----GGGTCEEEEEEECCC-----------------------------CCGGGSCHHHHHHHHHHHHT
T ss_pred HHHh----hhcCeEEEEEecCCccCchhhhhhhh----h---------hcccccccCCCHHHHHHHHHHHHc
Confidence 4211 12579999999999987643321111 0 111122457899999999999986
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=5.7e-07 Score=83.56 Aligned_cols=140 Identities=12% Similarity=0.042 Sum_probs=95.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+..+. . ....|+.||+..+.+.+.
T Consensus 127 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~----~~~~Y~asKaa~~~l~~~ 190 (277)
T 4fc7_A 127 NAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ------------A----LQVHAGSAKAAVDAMTRH 190 (277)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC------------T----TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC------------C----CcHHHHHHHHHHHHHHHH
Confidence 45677899999999999999853 345699999998753321 1 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC---CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~---~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.+++|+.|.++... ..............+ ...+.+.+|+|++++.++...
T Consensus 191 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA~~v~fL~s~~-- 255 (277)
T 4fc7_A 191 LAVEW----GPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP---------LQRLGNKTEIAHSVLYLASPL-- 255 (277)
T ss_dssp HHHHH----GGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGG--
T ss_pred HHHHh----hhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC---------CCCCcCHHHHHHHHHHHcCCc--
Confidence 64211 225799999999999876311 001222233332221 123678999999999888521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..++
T Consensus 256 -------~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 256 -------ASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp -------GTTCCSCEEEESTTHHHH
T ss_pred -------cCCcCCCEEEECCCcccC
Confidence 345679999998886544
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=8.3e-06 Score=76.45 Aligned_cols=140 Identities=11% Similarity=0.011 Sum_probs=98.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++...-. .++|++||..+..+ ... ...|+.||+..+.+.+.+.
T Consensus 134 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~------------~~~----~~~Y~asKaal~~l~~~la 197 (296)
T 3k31_A 134 GNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV------------VPH----YNVMGVCKAALEASVKYLA 197 (296)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC------------CTT----TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC------------CCC----chhhHHHHHHHHHHHHHHH
Confidence 45678899999999999999987643 48999999875211 111 4789999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|..+...... ...........+. ..+...+|+|++++.++...
T Consensus 198 ~e~----~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~fL~s~~----- 259 (296)
T 3k31_A 198 VDL----GKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------RRNTTLDDVGGAALYLLSDL----- 259 (296)
T ss_dssp HHH----HTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGG-----
T ss_pred HHH----hhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCCc-----
Confidence 211 225899999999999987654332 2233333322221 23567899999999988521
Q ss_pred CCCCCCCCCCceEEEeCCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|..+.
T Consensus 260 ----a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 260 ----GRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp ----GTTCCSCEEEESTTGGGC
T ss_pred ----cCCccCCEEEECCCcccc
Confidence 345679999998886543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2e-06 Score=78.93 Aligned_cols=125 Identities=15% Similarity=-0.016 Sum_probs=82.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcc----------cCCCCCCCCC---------------
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKE----------IVNGNESLPY--------------- 59 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~----------~~~~~E~~p~--------------- 59 (389)
.+.+..+++|+.|+.++++++.+... .++|++||..++++... ..+.+|++..
T Consensus 104 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 183 (276)
T 1wma_A 104 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 183 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhccccc
Confidence 45677899999999999999988633 49999999885433110 0111221100
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCcccc
Q 016468 60 FPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTD 139 (389)
Q Consensus 60 ~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~ 139 (389)
.....+...|+.||+..|.+++.+..+.-......++++++++|+.|.++.... ..
T Consensus 184 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------------------------~~ 239 (276)
T 1wma_A 184 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------------------------KA 239 (276)
T ss_dssp TTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------------------------TC
T ss_pred ccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------------------------cc
Confidence 000111479999999999988876421100000147999999999998764321 13
Q ss_pred ceeHHHHHHHHHHHHh
Q 016468 140 WIYVDNLVLALILASM 155 (389)
Q Consensus 140 ~v~vdDla~a~~~a~~ 155 (389)
+.+.+|+|++++.++.
T Consensus 240 ~~~~~~~a~~~~~l~~ 255 (276)
T 1wma_A 240 TKSPEEGAETPVYLAL 255 (276)
T ss_dssp SBCHHHHTHHHHHHHS
T ss_pred cCChhHhhhhHhhhhc
Confidence 6899999999999885
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.1e-06 Score=78.85 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=89.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCC--eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQ--RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvk--rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.|+.++.+++...-.+ ++|++||..+...+ ..+ ...|+.||+..|.+.+.+..
T Consensus 110 ~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~----~~~Y~asKaa~~~l~~~la~ 174 (259)
T 3edm_A 110 FWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG-----------GPG----ALAYATSKGAVMTFTRGLAK 174 (259)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC-----------STT----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC-----------CCC----cHHHHHHHHHHHHHHHHHHH
Confidence 45778999999999999999887443 89999998752121 111 46899999999998887643
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.. . .++++.++.|+.|..+...... +...... ........+.+.+|+|+++..++...
T Consensus 175 e~----~-~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~s~~------- 233 (259)
T 3edm_A 175 EV----G-PKIRVNAVCPGMISTTFHDTFTKPEVRERV---------AGATSLKREGSSEDVAGLVAFLASDD------- 233 (259)
T ss_dssp HH----T-TTCEEEEEEECCBCC-------------------------------CCBCHHHHHHHHHHHHSGG-------
T ss_pred HH----C-CCCEEEEEEECCCcCcccccccChHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCcc-------
Confidence 11 1 2399999999999876433211 1111111 11122345678999999999887521
Q ss_pred CCCCCCCCceEEEeCCCCCCh
Q 016468 165 KGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.....|+.+++.+|...+.
T Consensus 234 --~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 234 --AAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp --GTTCCSCEEEESBCSSBC-
T ss_pred --ccCccCCEEEECCCcCCCC
Confidence 3345799999987765443
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.19 E-value=8.2e-06 Score=77.72 Aligned_cols=137 Identities=10% Similarity=-0.031 Sum_probs=95.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+..+++|+.|+.++++++.. .+ ..++|++||..+ +.+ ..+ ...|+.||+..
T Consensus 178 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~-~~~-----------~~~----~~~Y~asKaal 241 (328)
T 2qhx_A 178 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT-NQP-----------LLG----YTIYTMAKGAL 241 (328)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTT-TSC-----------CTT----CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhh-ccC-----------CCC----cHHHHHHHHHH
Confidence 45567899999999999999874 34 679999999874 211 111 47899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.+.+.+.... ...|+++.+++|+.|..+. .. .+.....+....+. + ..+...+|+|++++.++..
T Consensus 242 ~~l~~~la~el----~~~gIrvn~v~PG~v~T~~-~~-~~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~ 307 (328)
T 2qhx_A 242 EGLTRSAALEL----APLQIRVNGVGPGLSVLVD-DM-PPAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSS 307 (328)
T ss_dssp HHHHHHHHHHH----GGGTEEEEEEEESSBSCCC-CS-CHHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHH----hhcCcEEEEEecCcccCCc-cc-cHHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCc
Confidence 99888764211 1258999999999999887 32 34444433332211 0 0367899999999998851
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. .....|+.+++.+|..
T Consensus 308 ~---------~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 308 K---------AKYITGTCVKVDGGYS 324 (328)
T ss_dssp G---------GTTCCSCEEEESTTGG
T ss_pred c---------ccCccCcEEEECCCcc
Confidence 1 3455789998887754
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.19 E-value=6.6e-06 Score=75.95 Aligned_cols=138 Identities=14% Similarity=0.075 Sum_probs=93.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC--eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ--RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk--rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++.+++...-.+ ++|++||..+ ...+..+ ...|+.||+..+.+.+.+.
T Consensus 118 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~-----------~~~~~~~----~~~Y~asKaa~~~~~~~la 182 (270)
T 3is3_A 118 EEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTS-----------KDFSVPK----HSLYSGSKGAVDSFVRIFS 182 (270)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTT-----------TTCCCTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchh-----------ccCCCCC----CchhHHHHHHHHHHHHHHH
Confidence 456788999999999999999987554 9999999762 1111112 5789999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
... ...|+++.+++|+.|..+... .............. ....+.+.+|+|++++.
T Consensus 183 ~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dvA~~v~~ 249 (270)
T 3is3_A 183 KDC----GDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS---------PLHRNGWPQDVANVVGF 249 (270)
T ss_dssp HHH----GGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS---------TTCSCBCHHHHHHHHHH
T ss_pred HHh----cccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC---------CCCCCCCHHHHHHHHHH
Confidence 211 225899999999999876321 00112222222221 12246789999999998
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
++... ..-..|+.+++.+|.
T Consensus 250 L~s~~---------~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 250 LVSKE---------GEWVNGKVLTLDGGA 269 (270)
T ss_dssp HTSGG---------GTTCCSCEEEESTTC
T ss_pred HcCCc---------cCCccCcEEEeCCCC
Confidence 87411 334679999988764
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.3e-06 Score=77.43 Aligned_cols=137 Identities=11% Similarity=0.089 Sum_probs=93.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+.++ +..+ ...|+.||+..|.+.+.+.
T Consensus 131 ~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-----------~~~~----~~~Y~asKaa~~~l~~~la 195 (271)
T 3v2g_A 131 ADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-----------PWPG----ISLYSASKAALAGLTKGLA 195 (271)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC-----------CSTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC-----------CCCC----chHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999876 4569999999654211 1111 5789999999998887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
... ...|+++.+++|+.|..+..... +..........+. ..+...+|+|++++.++...
T Consensus 196 ~e~----~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~---------~r~~~pedvA~~v~fL~s~~------- 254 (271)
T 3v2g_A 196 RDL----GPRGITVNIVHPGSTDTDMNPAD-GDHAEAQRERIAT---------GSYGEPQDIAGLVAWLAGPQ------- 254 (271)
T ss_dssp HHH----GGGTCEEEEEEECSBCSSSSCSS-CSSHHHHHHTCTT---------SSCBCHHHHHHHHHHHHSGG-------
T ss_pred HHh----hhhCeEEEEEecCCCcCCccccc-chhHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCcc-------
Confidence 211 22589999999999998754321 1111222222211 23678999999998887411
Q ss_pred CCCCCCCCceEEEeCCC
Q 016468 165 KGRPIASGQPYFVSDGF 181 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 255 --~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 255 --GKFVTGASLTIDGGA 269 (271)
T ss_dssp --GTTCCSCEEEESTTT
T ss_pred --cCCccCCEEEeCcCc
Confidence 345679999987764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.18 E-value=1.2e-06 Score=81.41 Aligned_cols=141 Identities=10% Similarity=-0.010 Sum_probs=91.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++++++... + .++|++||..+ +.+. . .+ ...|+.||+..|.+.+.+
T Consensus 113 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~-~~~~--------~--~~----~~~Y~asK~a~~~~~~~l 176 (280)
T 1xkq_A 113 IYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA-GPQA--------Q--PD----FLYYAIAKAALDQYTRST 176 (280)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG-SSSC--------C--CS----SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc-cCCC--------C--Cc----ccHHHHHHHHHHHHHHHH
Confidence 46778999999999999998753 4 79999999874 3211 0 11 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC--HHH----HHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPR----IVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~----li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.... .+.|+++.+++|+.|+++..... ... .-....... .......+.+.+|+|++++.++...
T Consensus 177 a~e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~pedvA~~v~~l~s~~ 246 (280)
T 1xkq_A 177 AIDL----AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK------ECIPIGAAGKPEHIANIILFLADRN 246 (280)
T ss_dssp HHHH----HTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT------TTCTTSSCBCHHHHHHHHHHHHCHH
T ss_pred HHHh----ccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH------cCCCCCCCCCHHHHHHHHHHhcCcc
Confidence 4210 12689999999999998732211 000 001111110 0011234789999999999887510
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. .....|+.+++.+|..
T Consensus 247 ~--------~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 247 L--------SFYILGQSIVADGGTS 263 (280)
T ss_dssp H--------HTTCCSCEEEESTTGG
T ss_pred c--------ccCccCCeEEECCCcc
Confidence 0 1135689999888754
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=3.9e-06 Score=77.67 Aligned_cols=137 Identities=12% Similarity=0.071 Sum_probs=93.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++...- -.++|++||..+..+ ..+ ...|+.||+..|.+.+.+.
T Consensus 110 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asK~a~~~~~~~la 173 (275)
T 2pd4_A 110 SAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY------------MAH----YNVMGLAKAALESAVRYLA 173 (275)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB------------CTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC------------CCC----chhhHHHHHHHHHHHHHHH
Confidence 3567789999999999999998761 258999999774221 111 4689999999999888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|.++.... ..+.....+....+. ..+.+.+|+|++++.++...
T Consensus 174 ~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~p~dva~~~~~l~s~~----- 235 (275)
T 2pd4_A 174 VDL----GKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLSSL----- 235 (275)
T ss_dssp HHH----HTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGG-----
T ss_pred HHh----hhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHhCcc-----
Confidence 211 2258999999999999874332 123333333222211 12568999999999988521
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 236 ----~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 236 ----SSGVSGEVHFVDAGY 250 (275)
T ss_dssp ----GTTCCSCEEEESTTG
T ss_pred ----ccCCCCCEEEECCCc
Confidence 234578888887774
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.16 E-value=7.3e-06 Score=75.55 Aligned_cols=145 Identities=13% Similarity=0.137 Sum_probs=94.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++. +.+..++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 107 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 170 (267)
T 3t4x_A 107 EDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP------------SQE----MAHYSATKTMQLSLSRS 170 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC------------CCc----chHHHHHHHHHHHHHHH
Confidence 3456679999999877777664 456679999999875211 111 57899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC-----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+.... ...|+++.++.|+.|..+.... ............. ........+.+.+|+|+++.
T Consensus 171 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~pedvA~~v~ 241 (267)
T 3t4x_A 171 LAELT----TGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-----RPTSIIQRLIRPEEIAHLVT 241 (267)
T ss_dssp HHHHT----TTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-----CTTCSSCSCBCTHHHHHHHH
T ss_pred HHHHh----CCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-----CCcccccCccCHHHHHHHHH
Confidence 65321 3368999999999987642110 0111111111000 00011235889999999998
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCCh
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINT 185 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~ 185 (389)
.++... .....|+.+++.+|...++
T Consensus 242 fL~s~~---------~~~itG~~i~vdGG~~~si 266 (267)
T 3t4x_A 242 FLSSPL---------SSAINGSALRIDGGLVRSV 266 (267)
T ss_dssp HHHSGG---------GTTCCSCEEEESTTCSCSC
T ss_pred HHcCcc---------ccCccCCeEEECCCccccc
Confidence 887521 3456799999998876653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.15 E-value=7.9e-06 Score=76.35 Aligned_cols=136 Identities=10% Similarity=-0.007 Sum_probs=92.0
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++ ++.+..++|++||..+..+ ... ...|+.||+..+.+.+.
T Consensus 138 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 201 (287)
T 3rku_A 138 EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA------------YPT----GSIYCASKFAVGAFTDS 201 (287)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC------------CCC----CchHHHHHHHHHHHHHH
Confidence 456788999999999999998 4456789999999875211 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC---CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~---~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.+++|+.|..+... ...+......... ..++..+|+|++++.++..
T Consensus 202 la~e~----~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~------------~~p~~pedvA~~v~~l~s~--- 262 (287)
T 3rku_A 202 LRKEL----INTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD------------TTPLMADDVADLIVYATSR--- 262 (287)
T ss_dssp HHHHT----TTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT------------SCCEEHHHHHHHHHHHHTS---
T ss_pred HHHHh----hhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc------------cCCCCHHHHHHHHHHHhCC---
Confidence 65321 236899999999999865210 0001111111111 1234899999999999862
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
......|+.+.+.++++.
T Consensus 263 ------~~~~i~g~~i~v~~g~~~ 280 (287)
T 3rku_A 263 ------KQNTVIADTLIFPTNQAS 280 (287)
T ss_dssp ------CTTEEEEEEEEEETTEEE
T ss_pred ------CCCeEecceEEeeCCCCC
Confidence 123445888888877653
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8.8e-06 Score=76.19 Aligned_cols=139 Identities=10% Similarity=0.039 Sum_probs=94.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++...- -.++|++||..+..+ ... ...|+.||+..+.+.+.+.
T Consensus 135 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~la 198 (293)
T 3grk_A 135 ANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKV------------MPN----YNVMGVAKAALEASVKYLA 198 (293)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSB------------CTT----TTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccC------------CCc----hHHHHHHHHHHHHHHHHHH
Confidence 4567789999999999999998753 348999999875221 111 4789999999998888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
... ...|+++.+++|+.|..+.... .............+. ..+...+|+|++++.++...
T Consensus 199 ~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~----- 260 (293)
T 3grk_A 199 VDL----GPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL---------RRTVTIDEVGDVGLYFLSDL----- 260 (293)
T ss_dssp HHH----GGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGG-----
T ss_pred HHH----hHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCcc-----
Confidence 211 2258999999999998874332 223333333332221 23567899999999887521
Q ss_pred CCCCCCCCCCceEEEeCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 261 ----~~~itG~~i~vdGG~~~ 277 (293)
T 3grk_A 261 ----SRSVTGEVHHADSGYHV 277 (293)
T ss_dssp ----GTTCCSCEEEESTTGGG
T ss_pred ----ccCCcceEEEECCCccc
Confidence 34567999999888643
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.14 E-value=9.4e-06 Score=74.13 Aligned_cols=141 Identities=12% Similarity=0.138 Sum_probs=88.1
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++ ++.+ .++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 102 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 164 (253)
T 1hxh_A 102 EDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSS-WLP-----------IEQ----YAGYSASKAAVSALTRA 164 (253)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhh-cCC-----------CCC----CccHHHHHHHHHHHHHH
Confidence 356778899999877766655 4456 89999999875 321 111 46899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHH-HHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSL-AKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~-~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+..+. .. .+.|++++++||+.|+++...... +..... +.... .......+.+.+|+|++++.++...
T Consensus 165 la~e~-~~-~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~~~dvA~~~~~l~s~~--- 233 (253)
T 1hxh_A 165 AALSC-RK-QGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDP------KLNRAGRAYMPERIAQLVLFLASDE--- 233 (253)
T ss_dssp HHHHH-HH-HTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBT------TTBTTCCEECHHHHHHHHHHHHSGG---
T ss_pred HHHHh-hh-cCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhh------ccCccCCCCCHHHHHHHHHHHcCcc---
Confidence 64210 00 002799999999999986321000 000000 11000 0111234789999999999988521
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 234 ------~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 234 ------SSVMSGSELHADNSI 248 (253)
T ss_dssp ------GTTCCSCEEEESSSC
T ss_pred ------ccCCCCcEEEECCCc
Confidence 234578899887774
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.13 E-value=6e-06 Score=76.51 Aligned_cols=145 Identities=12% Similarity=0.089 Sum_probs=94.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... + -.++|++||..+..+ .+ ....|+.||+..+.+.+
T Consensus 123 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~------~~~~Y~asKaa~~~~~~ 186 (277)
T 3tsc_A 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM----------QP------FMIHYTASKHAVTGLAR 186 (277)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------CS------SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC----------CC------CchhhHHHHHHHHHHHH
Confidence 456778999999999999997543 3 458999999875211 11 14689999999999888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCc-ceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVP-FKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~-~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.+.... ...|+++.+++|+.|..+..... .............. ..... ....-+.+.+|+|++++.++...
T Consensus 187 ~la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~r~~~pedvA~~v~~L~s~~-- 259 (277)
T 3tsc_A 187 AFAAEL----GKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP-FLPDWVAEPEDIADTVCWLASDE-- 259 (277)
T ss_dssp HHHHHH----GGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC-SSSCSCBCHHHHHHHHHHHHSGG--
T ss_pred HHHHHh----CccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhh-ccCCCCCCHHHHHHHHHHHhCcc--
Confidence 764311 22579999999999987644321 11112211111111 11111 11124889999999999888521
Q ss_pred CCCCCCCCCCCCCceEEEeCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 260 -------~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 260 -------SRKVTAAQIPVDQGS 274 (277)
T ss_dssp -------GTTCCSCEEEESTTG
T ss_pred -------ccCCcCCEEeeCCCc
Confidence 334679999888774
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=6.9e-06 Score=76.25 Aligned_cols=139 Identities=9% Similarity=0.049 Sum_probs=97.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.++.++++++... +..++|++||..+..+ ..+ ...|+.||+..|.+.+.+
T Consensus 130 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaal~~~~~~l 193 (280)
T 3nrc_A 130 EGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA------------MPS----YNTMGVAKASLEATVRYT 193 (280)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC------------CTT----THHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC------------CCC----chhhHHHHHHHHHHHHHH
Confidence 455678999999999999999764 3469999999875211 111 478999999999988865
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... ...|+++.+++|+.|..+.... .............+. ..+...+|+|++++.++...
T Consensus 194 a~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~~~~~pedvA~~v~~l~s~~---- 256 (280)
T 3nrc_A 194 ALAL----GEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL---------KKNVDIMEVGNTVAFLCSDM---- 256 (280)
T ss_dssp HHHH----GGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT---------CSCCCHHHHHHHHHHTTSGG----
T ss_pred HHHH----HHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCcc----
Confidence 4211 2257999999999998874432 223444443333221 23677999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 257 -----~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 257 -----ATGITGEVVHVDAGYHC 273 (280)
T ss_dssp -----GTTCCSCEEEESTTGGG
T ss_pred -----cCCcCCcEEEECCCccc
Confidence 34467999999887643
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.12 E-value=1.3e-05 Score=72.24 Aligned_cols=132 Identities=8% Similarity=-0.021 Sum_probs=89.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++++++...- -.++|++||..+..+ ..+ ...|+.||+..|.+.+.+.
T Consensus 95 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~~la 158 (236)
T 1ooe_A 95 KNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------------TPS----MIGYGMAKAAVHHLTSSLA 158 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------CTT----BHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC------------CCC----cHHHHHHHHHHHHHHHHHH
Confidence 3457788999999999999998752 248999999875211 111 4789999999999999876
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.+. . ....|+++++++|+.|.++. ....... .....++..+|+|++++..+..-
T Consensus 159 ~e~-~-~~~~gi~v~~v~Pg~v~t~~--------~~~~~~~---------~~~~~~~~~~dvA~~i~~~l~s~------- 212 (236)
T 1ooe_A 159 AKD-S-GLPDNSAVLTIMPVTLDTPM--------NRKWMPN---------ADHSSWTPLSFISEHLLKWTTET------- 212 (236)
T ss_dssp STT-S-SCCTTCEEEEEEESCBCCHH--------HHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCG-------
T ss_pred HHh-c-ccCCCeEEEEEecCcccCcc--------hhhcCCC---------ccccccCCHHHHHHHHHHHHcCC-------
Confidence 431 0 01467999999999997651 1111111 11234678899999998555310
Q ss_pred CCCCCCCCceEEEeCCC
Q 016468 165 KGRPIASGQPYFVSDGF 181 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.++.
T Consensus 213 -~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 213 -SSRPSSGALLKITTEN 228 (236)
T ss_dssp -GGCCCTTCEEEEEEET
T ss_pred -CcccccccEEEEecCC
Confidence 0334568888887664
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.12 E-value=1.8e-06 Score=81.81 Aligned_cols=145 Identities=18% Similarity=0.197 Sum_probs=93.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... + -.++|++||..+..+. + . ...|+.||+..|.+.+
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~----------~--~----~~~Y~asKaa~~~l~~ 220 (317)
T 3oec_A 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA----------P--G----QSHYAASKHGVQGLML 220 (317)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC----------T--T----BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC----------C--C----CcchHHHHHHHHHHHH
Confidence 456778999999999999998542 2 3579999998753221 1 1 4789999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCc-------cee-cCCCccccceeHHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVP-------FKI-GEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~-------~~~-g~~~~~~~~v~vdDla~a~~~a 153 (389)
.+.... ...|+++.+++|+.|+++.... ............. ..+ ........+++++|+|++++.+
T Consensus 221 ~la~e~----~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL 294 (317)
T 3oec_A 221 SLANEV----GRHNIRVNSVNPGAVNTEMALN--EKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWL 294 (317)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBSSHHHHC--HHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHH
T ss_pred HHHHHH----hhcCeEEEEEecCcccCccccc--hhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHH
Confidence 765211 2258999999999998763210 0111111000000 000 0111125688999999999888
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+... .....|+++++.+|..
T Consensus 295 ~s~~---------a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 295 ASDE---------ARYIHGAAIPVDGGQL 314 (317)
T ss_dssp TSGG---------GTTCCSCEEEESTTGG
T ss_pred cCCc---------ccCCCCCEEEECcchh
Confidence 7410 3346799999988754
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.12 E-value=8.2e-06 Score=74.97 Aligned_cols=137 Identities=10% Similarity=0.059 Sum_probs=95.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++++++...-. .++|++||..+.++ .+ . ...|+.||+..+.+.+.+..
T Consensus 114 ~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------~~--~----~~~Y~asKaa~~~~~~~la~ 177 (266)
T 3oig_A 114 GFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV----------MP--N----YNVMGVAKASLDASVKYLAA 177 (266)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC----------CT--T----THHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc----------CC--C----cchhHHHHHHHHHHHHHHHH
Confidence 4567889999999999999987633 48999999875221 11 1 46899999999988887642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. ...|+++.+++|+.|..+.... ..+.....+....+. ..+.+.+|+|++++.++...
T Consensus 178 e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~p~dva~~v~~l~s~~------ 238 (266)
T 3oig_A 178 DL----GKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL---------RRTTTPEEVGDTAAFLFSDM------ 238 (266)
T ss_dssp HH----GGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHSGG------
T ss_pred HH----hhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHcCCc------
Confidence 11 2257999999999998864332 123344443332211 23678999999999988621
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|-.
T Consensus 239 ---~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 239 ---SRGITGENLHVDSGFH 254 (266)
T ss_dssp ---GTTCCSCEEEESTTGG
T ss_pred ---hhcCcCCEEEECCCeE
Confidence 3346799999988754
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.11 E-value=8.2e-06 Score=74.29 Aligned_cols=137 Identities=15% Similarity=0.116 Sum_probs=94.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.|+.++++++... +..++|++||..+..+ ... ...|+.||+..+.+.+.+..
T Consensus 114 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~~la~ 177 (255)
T 3icc_A 114 FFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS------------LPD----FIAYSMTKGAINTMTFTLAK 177 (255)
T ss_dssp HHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC------------CTT----BHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC------------CCC----cchhHHhHHHHHHHHHHHHH
Confidence 45677899999999999999875 3458999999875221 111 47899999999988877642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. ...++++.+++|+.|..+-..... +..........+ ...+.+.+|+++++..++...
T Consensus 178 e~----~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~l~s~~------ 238 (255)
T 3icc_A 178 QL----GARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA---------FNRLGEVEDIADTAAFLASPD------ 238 (255)
T ss_dssp HH----GGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------TSSCBCHHHHHHHHHHHHSGG------
T ss_pred HH----HhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------cCCCCCHHHHHHHHHHHhCcc------
Confidence 11 225799999999999887543221 222222222221 134678999999998887521
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+++.+|..
T Consensus 239 ---~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 239 ---SRWVTGQLIDVSGGSC 254 (255)
T ss_dssp ---GTTCCSCEEEESSSTT
T ss_pred ---cCCccCCEEEecCCee
Confidence 3456799999988753
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=98.10 E-value=9.7e-06 Score=76.87 Aligned_cols=125 Identities=11% Similarity=0.012 Sum_probs=73.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC----------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHH--
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG----------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKS-- 74 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g----------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~-- 74 (389)
.+.+..+++|+.|+.++++++.... -.++|++||..++.+ .+ ....|+.||+
T Consensus 109 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~----------~~------~~~~Y~aSKaal 172 (319)
T 3ioy_A 109 DDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA----------AG------SPGIYNTTKFAV 172 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC----------CS------SSHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC----------CC------CCHHHHHHHHHH
Confidence 4567789999999999999987643 457999999885321 11 1468999999
Q ss_pred --HHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCC-CccccceeHHHHHHH
Q 016468 75 --VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEP-SVKTDWIYVDNLVLA 149 (389)
Q Consensus 75 --~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~-~~~~~~v~vdDla~a 149 (389)
.+|.+..++. ..|+++++++|+.|.++-.... .+..+.............+- ......++.+|+|++
T Consensus 173 ~~~~~~la~e~~--------~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~ 244 (319)
T 3ioy_A 173 RGLSESLHYSLL--------KYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGAR 244 (319)
T ss_dssp HHHHHHHHHHHG--------GGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHH
T ss_pred HHHHHHHHHHhh--------hcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHH
Confidence 5555555553 2579999999999987643211 11111100000000000010 111123899999999
Q ss_pred HHHHHh
Q 016468 150 LILASM 155 (389)
Q Consensus 150 ~~~a~~ 155 (389)
++.+++
T Consensus 245 ~~~al~ 250 (319)
T 3ioy_A 245 VIEAMK 250 (319)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999997
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.09 E-value=6.4e-06 Score=76.06 Aligned_cols=135 Identities=16% Similarity=0.072 Sum_probs=89.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.|+.++++++...- -.++|++||..+..+. | . ...|+.||+..|.+.+.+..
T Consensus 128 ~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asKaa~~~l~~~la~ 191 (267)
T 3u5t_A 128 VFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH----------P--S----YGIYAAAKAGVEAMTHVLSK 191 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC----------T--T----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC----------C--C----chHHHHHHHHHHHHHHHHHH
Confidence 456778899999999999998752 2489999998752211 1 1 46899999999999887753
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.. ...|+++.++.|+.|..+..... ........... .....+...+|+|++++.++..
T Consensus 192 e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~p~~r~~~pedvA~~v~~L~s~-------- 250 (267)
T 3u5t_A 192 EL----RGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKL---------APLERLGTPQDIAGAVAFLAGP-------- 250 (267)
T ss_dssp HT----TTSCCEEEEEEECCBC-----------CHHHHHTS---------STTCSCBCHHHHHHHHHHHHST--------
T ss_pred Hh----hhhCCEEEEEEECCCcCccccccCCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCc--------
Confidence 21 23689999999999976532211 11111222221 1223467899999999988751
Q ss_pred CCCCCCCCceEEEeCC
Q 016468 165 KGRPIASGQPYFVSDG 180 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~ 180 (389)
......|+.+++.+|
T Consensus 251 -~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 251 -DGAWVNGQVLRANGG 265 (267)
T ss_dssp -TTTTCCSEEEEESSS
T ss_pred -cccCccCCEEEeCCC
Confidence 134457999888766
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.08 E-value=1.6e-05 Score=74.01 Aligned_cols=135 Identities=12% Similarity=-0.005 Sum_probs=92.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC----------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG----------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g----------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+.+..+++|+.|+.++++++...- ..++|++||..+ +.+ ..+ ...|+.||+..+
T Consensus 139 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~ 202 (288)
T 2x9g_A 139 QVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV-DQP-----------CMA----FSLYNMGKHALV 202 (288)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTT-TSC-----------CTT----CHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccc-cCC-----------CCC----CchHHHHHHHHH
Confidence 456788999999999999987542 458999999874 221 111 478999999888
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccc-eeHHHHHHHHHHHHhc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDW-IYVDNLVLALILASMG 156 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~-v~vdDla~a~~~a~~~ 156 (389)
.+.+.+.... ...|+++.+++|+.|+++. . ..+..........+. ..+ ...+|+|++++.++..
T Consensus 203 ~l~~~la~e~----~~~gI~vn~v~PG~v~t~~-~-~~~~~~~~~~~~~p~---------~r~~~~pedvA~~v~~l~s~ 267 (288)
T 2x9g_A 203 GLTQSAALEL----APYGIRVNGVAPGVSLLPV-A-MGEEEKDKWRRKVPL---------GRREASAEQIADAVIFLVSG 267 (288)
T ss_dssp HHHHHHHHHH----GGGTEEEEEEEESSCSCCT-T-SCHHHHHHHHHTCTT---------TSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHh----hccCeEEEEEEeccccCcc-c-cChHHHHHHHhhCCC---------CCCCCCHHHHHHHHHHHhCc
Confidence 8877654210 1258999999999999986 3 223222222222111 124 6899999999998852
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. .....|+.+++.+|..
T Consensus 268 ~---------~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 268 S---------AQYITGSIIKVDGGLS 284 (288)
T ss_dssp G---------GTTCCSCEEEESTTGG
T ss_pred c---------ccCccCCEEEECcchh
Confidence 1 2345788888877753
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.2e-06 Score=77.99 Aligned_cols=139 Identities=12% Similarity=0.046 Sum_probs=93.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++... + -.++|++||..+ +.+ ..+ ...|+.||+..+.+.+
T Consensus 120 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~l~~ 183 (266)
T 4egf_A 120 QLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAA-LAP-----------LPD----HYAYCTSKAGLVMATK 183 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhh-ccC-----------CCC----ChHHHHHHHHHHHHHH
Confidence 345678899999999999998653 2 358999999875 211 111 4789999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
.+.... ...|+++.+++|+.|..+..... .+.....+.... ....+.+.+|+|++++.++...
T Consensus 184 ~la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------p~~r~~~p~dva~~v~~L~s~~-- 248 (266)
T 4egf_A 184 VLAREL----GPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI---------PLGRFAVPHEVSDAVVWLASDA-- 248 (266)
T ss_dssp HHHHHH----GGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTC---------TTSSCBCHHHHHHHHHHHHSGG--
T ss_pred HHHHHH----hhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCch--
Confidence 764211 22589999999999986522100 112222222222 1224678999999999887521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
.....|+.+++.+|..+
T Consensus 249 -------~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 249 -------ASMINGVDIPVDGGYTM 265 (266)
T ss_dssp -------GTTCCSCEEEESTTGGG
T ss_pred -------hcCccCcEEEECCCccC
Confidence 34567999999887543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.5e-05 Score=74.69 Aligned_cols=145 Identities=12% Similarity=0.071 Sum_probs=93.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+..+ ... ...|+.||+..+.+.+
T Consensus 140 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~ 203 (299)
T 3t7c_A 140 KTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG------------AEN----IGNYIASKHGLHGLMR 203 (299)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC------------CCC----cchHHHHHHHHHHHHH
Confidence 456789999999999999998653 3568999999875211 111 4789999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcC---CCcc------eecCCCccccceeHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLG---LVPF------KIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g---~~~~------~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.+.... ...|+++.+++|+.|..+....... ....... .... ....... ..+...+|+|++++.
T Consensus 204 ~la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~f 276 (299)
T 3t7c_A 204 TMALEL----GPRNIRVNIVCPSSVATPMLLNEPT--YRMFRPDLENPTVEDFQVASRQMHVLP-IPYVEPADISNAILF 276 (299)
T ss_dssp HHHHHH----GGGTEEEEEEEESCBSSTTTSSHHH--HHHHCTTSSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHH
T ss_pred HHHHHh----cccCcEEEEEecCCccCccccccch--hhhhhhhhccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHH
Confidence 764211 2258999999999999875432100 0000000 0000 0000001 347889999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
++... ..-..|+.+++.+|..+
T Consensus 277 L~s~~---------a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 277 LVSDD---------ARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHSGG---------GTTCCSCEEEESTTGGG
T ss_pred HhCcc---------cccCcCCEEeeCCCccc
Confidence 88521 33467999999887643
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.2e-05 Score=74.83 Aligned_cols=145 Identities=12% Similarity=0.142 Sum_probs=94.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... + -.++|++||..+..+ ... ...|+.||+..+.+.+
T Consensus 127 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~ 190 (286)
T 3uve_A 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKA------------YPH----TGHYVAAKHGVVGLMR 190 (286)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccC------------CCC----ccHHHHHHHHHHHHHH
Confidence 456778999999999999998653 2 458999999875211 111 4689999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcc---------eecCCCccccceeHHHHHHHHHH
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPF---------KIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~---------~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.+.... ...|+++.+++|+.|..+..... ............. ..... ....+.+.+|+|++++.
T Consensus 191 ~la~e~----~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~p~dvA~~v~f 263 (286)
T 3uve_A 191 AFGVEL----GQHMIRVNSVHPTHVKTPMLHNE--GTFKMFRPDLENPGPDDMAPICQMFHT-LPIPWVEPIDISNAVLF 263 (286)
T ss_dssp HHHHHH----GGGTEEEEEEEESSBSSTTTSSH--HHHHHHCTTSSSCCHHHHHHHHHTTCS-SSCSCBCHHHHHHHHHH
T ss_pred HHHHHh----cccCeEEEEEecCcccCCccccc--chhhhccccccccchhhHHHHHHhhhc-cCCCcCCHHHHHHHHHH
Confidence 764211 22589999999999988754321 0111111000000 00111 11457899999999998
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
++... ..-..|+.+++.+|..+
T Consensus 264 L~s~~---------a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 264 FASDE---------ARYITGVTLPIDAGSCL 285 (286)
T ss_dssp HHSGG---------GTTCCSCEEEESTTGGG
T ss_pred HcCcc---------ccCCcCCEEeECCcccc
Confidence 87521 33567999999887543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.05 E-value=1.8e-05 Score=72.57 Aligned_cols=109 Identities=11% Similarity=0.019 Sum_probs=78.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----------C-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----------G-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGR 71 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----------g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~ 71 (389)
.+.+..+++|+.++.++++++... + ..++|++||..+..+. . +..+ ...|+.
T Consensus 125 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-~--------~~~~----~~~Y~~ 191 (267)
T 1sny_A 125 QELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG-N--------TDGG----MYAYRT 191 (267)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT-C--------CSCC----CHHHHH
T ss_pred HHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC-C--------CCCC----chHHHH
Confidence 355678899999999999999754 2 4689999998853221 1 1112 468999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 72 SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
||+..|.++..+.... ...+++++++||+.|..+-... ..++..+|+++.++
T Consensus 192 sK~a~~~~~~~la~e~----~~~gi~v~~v~Pg~v~t~~~~~------------------------~~~~~~~~~a~~~~ 243 (267)
T 1sny_A 192 SKSALNAATKSLSVDL----YPQRIMCVSLHPGWVKTDMGGS------------------------SAPLDVPTSTGQIV 243 (267)
T ss_dssp HHHHHHHHHHHHHHHH----GGGTCEEEEECCCSBCSTTTCT------------------------TCSBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----hcCCcEEEEeCCcceecCCCCC------------------------CCCCCHHHHHHHHH
Confidence 9999999988764210 1257999999999987553221 12477899999999
Q ss_pred HHHhc
Q 016468 152 LASMG 156 (389)
Q Consensus 152 ~a~~~ 156 (389)
.++..
T Consensus 244 ~~~~~ 248 (267)
T 1sny_A 244 QTISK 248 (267)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99873
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=3.2e-05 Score=70.46 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=86.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++. +.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 97 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~~~~~ 160 (248)
T 3asu_A 97 EDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG-SWP-----------YAG----GNVYGATKAFVRQFSLN 160 (248)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchh-ccC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 3567789999999999999986 456789999999874 211 111 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceec-CCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYG-PGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyG-p~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
+.... ...|+++.+++|+.|.| +........--.... . .. ....++..+|+|++++.++..
T Consensus 161 la~e~----~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~--~---~~----~~~~~~~p~dvA~~v~~l~s~----- 222 (248)
T 3asu_A 161 LRTDL----HGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE--K---TY----QNTVALTPEDVSEAVWWVSTL----- 222 (248)
T ss_dssp HHHHT----TTSCCEEEEEEECSBCC-------------------------------CCBCHHHHHHHHHHHHHS-----
T ss_pred HHHHh----hhcCcEEEEEeccccccCcchhhcccCchHHHH--H---HH----hccCCCCHHHHHHHHHHHhcC-----
Confidence 64211 23689999999999985 321110000000000 0 00 012346899999999998862
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.++
T Consensus 223 -----~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 223 -----PAHVNINTLEMMPV 236 (248)
T ss_dssp -----CTTCCCCEEEECCT
T ss_pred -----CccceeeEEEEccc
Confidence 33456777776554
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.03 E-value=5.8e-06 Score=75.55 Aligned_cols=133 Identities=15% Similarity=0.075 Sum_probs=88.8
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++ ++.+..++|++||..+..+ ..+ ...|+.||+..+.+.+.+
T Consensus 116 ~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asK~a~~~l~~~l 179 (252)
T 3f1l_A 116 VWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG------------RAN----WGAYAASKFATEGMMQVL 179 (252)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC------------CCC----CchhHHHHHHHHHHHHHH
Confidence 45678999999999999999 4456789999999875221 111 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... . ..+++.++.|+.|..+ +....... .....+...+|++++++.++...
T Consensus 180 a~e~----~-~~irvn~v~PG~v~t~--------~~~~~~~~---------~~~~~~~~p~dva~~~~~L~s~~------ 231 (252)
T 3f1l_A 180 ADEY----Q-QRLRVNCINPGGTRTA--------MRASAFPT---------EDPQKLKTPADIMPLYLWLMGDD------ 231 (252)
T ss_dssp HHHT----T-TTCEEEEEECCSBSSH--------HHHHHCTT---------CCGGGSBCTGGGHHHHHHHHSGG------
T ss_pred HHHh----c-CCcEEEEEecCcccCc--------hhhhhCCc---------cchhccCCHHHHHHHHHHHcCcc------
Confidence 5321 1 2389999999988532 12211111 11234678999999998887521
Q ss_pred CCCCCCCCCceEEEeCCCCCChHH
Q 016468 164 QKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
.....|+.+++.+|...++.|
T Consensus 232 ---~~~itG~~i~vdgG~~~~~~q 252 (252)
T 3f1l_A 232 ---SRRKTGMTFDAQPGRKPGISQ 252 (252)
T ss_dssp ---GTTCCSCEEESSCC-------
T ss_pred ---ccCCCCCEEEeCCCcCCCCCC
Confidence 334679999999888766543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.02 E-value=9.7e-06 Score=72.86 Aligned_cols=109 Identities=17% Similarity=0.069 Sum_probs=70.1
Q ss_pred CcchhhhHhhhhHHHHHHHH----HHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEA----CLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~a----a~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.+++++ +++.+.+++|++||..+ +.+ ..+ ...|+.||+..|.++..
T Consensus 100 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~-----------~~~----~~~Y~~sK~a~~~~~~~ 163 (234)
T 2ehd_A 100 EEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAG-KNP-----------FKG----GAAYNASKFGLLGLAGA 163 (234)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTT-TSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchh-cCC-----------CCC----CchhhHHHHHHHHHHHH
Confidence 34577889999999755555 45667889999999874 321 111 47899999988888766
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|++++++||+.|..+.... .+ .. ..+++.+|+|++++.++.
T Consensus 164 la~e~----~~~gi~v~~v~Pg~v~t~~~~~-~~--------~~-----------~~~~~~~dvA~~~~~l~~ 212 (234)
T 2ehd_A 164 AMLDL----REANVRVVNVLPGSVDTGFAGN-TP--------GQ-----------AWKLKPEDVAQAVLFALE 212 (234)
T ss_dssp HHHHH----GGGTEEEEEEECC------------------------------------CCHHHHHHHHHHHHH
T ss_pred HHHHH----hhcCcEEEEEEeCCCcCCcccc-cc--------cc-----------cCCCCHHHHHHHHHHHhC
Confidence 53210 1258999999999987642211 00 00 115799999999999986
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=2.9e-05 Score=72.55 Aligned_cols=137 Identities=7% Similarity=0.021 Sum_probs=93.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCC-CcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHV-DSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~-~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++++++... .-.++|++||..+.++ .| . . ..|+.||+..+.+.+.+
T Consensus 143 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~----------~~--~----~~~~Y~asKaa~~~~~~~l 206 (297)
T 1d7o_A 143 KGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI----------IP--G----YGGGMSSAKAALESDTRVL 206 (297)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CT--T----CTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccC----------CC--C----cchHHHHHHHHHHHHHHHH
Confidence 356778999999999999999865 1258999999874221 11 1 2 47999999999988876
Q ss_pred CCCCCCCCC-CCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 84 NGRPFKKNN-RKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 84 ~~~~~~~~~-~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
.... . +.|+++.+++|+.|.++..... .+.+...+....+. ..+...+|+|++++.++...
T Consensus 207 a~e~----~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~--- 270 (297)
T 1d7o_A 207 AFEA----GRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPL--- 270 (297)
T ss_dssp HHHH----HHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGG---
T ss_pred HHHh----CcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCcc---
Confidence 4210 1 1479999999999999865432 23333333322211 12567999999998887410
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 271 ------~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 271 ------ASAITGATIYVDNGL 285 (297)
T ss_dssp ------GTTCCSCEEEESTTG
T ss_pred ------ccCCCCCEEEECCCc
Confidence 234578899888874
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.01 E-value=9.2e-06 Score=75.23 Aligned_cols=124 Identities=10% Similarity=0.063 Sum_probs=79.7
Q ss_pred CcchhhhHhhhhH----HHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNING----TCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~g----t~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+.+..+++|+.+ ++++++.+++.++ +++|++||..+ ++. .+..+ ...|+.||+..|.++
T Consensus 133 ~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~-~~~---------~~~~~----~~~Y~~sK~a~~~~~ 198 (279)
T 1xg5_A 133 SGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG-HRV---------LPLSV----THFYSATKYAVTALT 198 (279)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG-TSC---------CSCGG----GHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhh-ccc---------CCCCC----CchhHHHHHHHHHHH
Confidence 3567789999999 8888888888886 79999999874 321 11112 468999999999888
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..+.... . ....++++.+++|+.|.++... .. ......... .......+++++|+|++++.++.
T Consensus 199 ~~la~e~-~-~~~~~i~v~~v~Pg~v~t~~~~----~~----~~~~~~~~~-~~~~~~~~~~~~dvA~~i~~l~~ 262 (279)
T 1xg5_A 199 EGLRQEL-R-EAQTHIRATCISPGVVETQFAF----KL----HDKDPEKAA-ATYEQMKCLKPEDVAEAVIYVLS 262 (279)
T ss_dssp HHHHHHH-H-HTTCCCEEEEEEESCBCSSHHH----HH----TTTCHHHHH-HHHC---CBCHHHHHHHHHHHHH
T ss_pred HHHHHHH-h-hcCCCeEEEEEecCcccchhhh----hh----cccChhHHh-hhcccccCCCHHHHHHHHHHHhc
Confidence 7654210 0 0036899999999999765210 00 000000000 00011246899999999999987
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.1e-05 Score=71.37 Aligned_cols=136 Identities=10% Similarity=0.035 Sum_probs=90.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+ +.+ ..+ ...|+.||+..|.+.+.
T Consensus 97 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~ 160 (244)
T 1zmo_A 97 ADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVG-KKP-----------LAY----NPLYGPARAATVALVES 160 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG-TSC-----------CTT----CTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh-CCC-----------CCC----chHHHHHHHHHHHHHHH
Confidence 3556789999999999999886 456789999999875 221 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCC---CCCH-HHHHHHHHc-CCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGE---ERHL-PRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~---~~~~-~~li~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
+.... ...|+++.+++|+.|-.+.. .... +........ ..+ ...+...+|+|++++.++..
T Consensus 161 la~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pe~vA~~v~~l~s~- 226 (244)
T 1zmo_A 161 AAKTL----SRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVP---------LGRLGRPDEMGALITFLASR- 226 (244)
T ss_dssp HHHHH----GGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCT---------TCSCBCHHHHHHHHHHHHTT-
T ss_pred HHHHH----hhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCC---------CCCCcCHHHHHHHHHHHcCc-
Confidence 64211 22589999999999876533 1100 011111111 110 11367899999999988851
Q ss_pred cCCCCCCCCCCCCCCceEEEeCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
......|+.+.+.+|
T Consensus 227 --------~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 227 --------RAAPIVGQFFAFTGG 241 (244)
T ss_dssp --------TTGGGTTCEEEESTT
T ss_pred --------cccCccCCEEEeCCC
Confidence 023456888887766
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=3.6e-06 Score=76.73 Aligned_cols=138 Identities=16% Similarity=0.115 Sum_probs=90.0
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++ ++.+ ..++|++||..+..+. + + ...|+.||+..+.+.+
T Consensus 102 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asKaa~~~~~~ 165 (247)
T 3rwb_A 102 DHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT----------P--N----MAAYVAAKGGVIGFTR 165 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----------T--T----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC----------C--C----chhhHHHHHHHHHHHH
Confidence 356778999999999999984 4445 6799999998753321 1 1 4789999999888887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...|+++.+++|+.|..+................. .....+...+|+++++..++...
T Consensus 166 ~la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--------~~~~r~~~pedva~~v~~L~s~~---- 229 (247)
T 3rwb_A 166 ALATEL----GKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--------QAMKGKGQPEHIADVVSFLASDD---- 229 (247)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--------SSSCSCBCHHHHHHHHHHHHSGG----
T ss_pred HHHHHh----hhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--------cccCCCcCHHHHHHHHHHHhCcc----
Confidence 764211 22589999999999976522111000000000000 01123567999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 230 -----~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 230 -----ARWITGQTLNVDAGM 244 (247)
T ss_dssp -----GTTCCSCEEEESTTS
T ss_pred -----ccCCCCCEEEECCCc
Confidence 334679999988774
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.1e-06 Score=79.59 Aligned_cols=125 Identities=12% Similarity=0.099 Sum_probs=78.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++.. .+ ..++|++||..+..+ ..+ ...|+.||+..|.+.+
T Consensus 130 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~~~~ 193 (301)
T 3tjr_A 130 DDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP------------NAG----LGTYGVAKYGVVGLAE 193 (301)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC------------CTT----BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC------------CCC----chHHHHHHHHHHHHHH
Confidence 35677899999999999999854 34 568999999875321 111 4789999999888877
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHH-----HHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVS-----LAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~-----~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.... ...|+++.+++|+.|..+-.. .... ......+...++......++++++|+|++++.+++
T Consensus 194 ~la~e~----~~~gi~v~~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~ 264 (301)
T 3tjr_A 194 TLAREV----KPNGIGVSVLCPMVVETKLVS----NSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAIL 264 (301)
T ss_dssp HHHHHH----GGGTEEEEEECCSCCCSSHHH----HHHHHC----------------------CCCHHHHHHHHHHHHH
T ss_pred HHHHHh----cccCcEEEEEECCcccccccc----ccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHh
Confidence 664211 225799999999998754211 1100 00011111222333344578999999999999997
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.98 E-value=8.6e-06 Score=75.58 Aligned_cols=138 Identities=14% Similarity=0.113 Sum_probs=93.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++++++... + -.++|++||.....+. +..+ ...|+.||+..|.+.+
T Consensus 131 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~----------~~~~----~~~Y~asKaa~~~l~~ 196 (276)
T 3r1i_A 131 EEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN----------IPQQ----VSHYCTSKAAVVHLTK 196 (276)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------CSSC----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC----------CCCC----cchHHHHHHHHHHHHH
Confidence 345677899999999999998653 3 2589999997742211 0011 4689999999999888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+..+. ...|+++.+++|+.|..+.... .+..........+ ...+...+|+|++++.++...
T Consensus 197 ~la~e~----~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s~~---- 258 (276)
T 3r1i_A 197 AMAVEL----APHQIRVNSVSPGYIRTELVEP-LADYHALWEPKIP---------LGRMGRPEELTGLYLYLASAA---- 258 (276)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBCSTTTGG-GGGGHHHHGGGST---------TSSCBCGGGSHHHHHHHHSGG----
T ss_pred HHHHHH----hhcCcEEEEEeeCCCcCCcccc-chHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHcCcc----
Confidence 765311 1258999999999998775432 1222222222211 123678999999999887521
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.+++.+|.
T Consensus 259 -----~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 259 -----SSYMTGSDIVIDGGY 273 (276)
T ss_dssp -----GTTCCSCEEEESTTT
T ss_pred -----ccCccCcEEEECcCc
Confidence 345679999988775
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.94 E-value=4.6e-05 Score=70.49 Aligned_cols=135 Identities=11% Similarity=0.011 Sum_probs=84.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCC-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvk-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++. +.+.. ++|++||..+ +.+ ... ...|+.||+..|.+.+
T Consensus 120 ~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~l~~ 183 (272)
T 2nwq_A 120 DDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAG-KWP-----------YPG----SHVYGGTKAFVEQFSL 183 (272)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchh-ccC-----------CCC----CchHHHHHHHHHHHHH
Confidence 3567789999999888777775 45667 9999999874 211 111 4689999999999998
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.+.... ...|+++.+++|+.|..+........ . ......... ...++..+|+|++++.++..
T Consensus 184 ~la~el----~~~gIrvn~v~PG~v~T~~~~~~~~~---~--~~~~~~~~~----~~~~~~pedvA~~v~~l~s~----- 245 (272)
T 2nwq_A 184 NLRCDL----QGTGVRVTNLEPGLCESEFSLVRFGG---D--QARYDKTYA----GAHPIQPEDIAETIFWIMNQ----- 245 (272)
T ss_dssp HHHTTC----TTSCCEEEEEEECSBC-----------------------------CCCCBCHHHHHHHHHHHHTS-----
T ss_pred HHHHHh----CccCeEEEEEEcCCCcCcchhccccc---c--hHHHHHhhc----cCCCCCHHHHHHHHHHHhCC-----
Confidence 875321 23689999999999987643211000 0 000000000 11247899999999998862
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+.+.++
T Consensus 246 -----~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 246 -----PAHLNINSLEIMPV 259 (272)
T ss_dssp -----CTTEEEEEEEEEET
T ss_pred -----CccCccceEEEeec
Confidence 23345666666554
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=3e-05 Score=70.12 Aligned_cols=130 Identities=15% Similarity=0.055 Sum_probs=90.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++++++...- -.++|++||..+ +.+ ..+ ...|+.||+..|.+.+.+..
T Consensus 100 ~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~la~ 163 (241)
T 1dhr_A 100 NCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA-LDG-----------TPG----MIGYGMAKGAVHQLCQSLAG 163 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG-GSC-----------CTT----BHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH-ccC-----------CCC----chHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999998752 258999999875 321 111 47899999999999998864
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
... ....|+++.+++|+.|-.+ +....... .....++..+|+|++++.++..
T Consensus 164 e~~--~~~~gi~v~~v~PG~v~T~--------~~~~~~~~---------~~~~~~~~~~~vA~~v~~l~~~--------- 215 (241)
T 1dhr_A 164 KNS--GMPSGAAAIAVLPVTLDTP--------MNRKSMPE---------ADFSSWTPLEFLVETFHDWITG--------- 215 (241)
T ss_dssp TTS--SCCTTCEEEEEEESCEECH--------HHHHHSTT---------SCGGGSEEHHHHHHHHHHHHTT---------
T ss_pred Hhc--cCCCCeEEEEEecCcccCc--------cccccCcc---------hhhccCCCHHHHHHHHHHHhcC---------
Confidence 320 0046899999999988543 11111111 1123467889999999988852
Q ss_pred CCCCCCCceEEEeCCC
Q 016468 166 GRPIASGQPYFVSDGF 181 (389)
Q Consensus 166 ~~~~~~g~~y~i~~~~ 181 (389)
......|+.+.+.++.
T Consensus 216 ~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 216 NKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TTCCCTTCEEEEEEET
T ss_pred CCcCccceEEEEeCCC
Confidence 1334578888887654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=1.7e-06 Score=82.46 Aligned_cols=97 Identities=9% Similarity=0.009 Sum_probs=69.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-CC-eEEEecCCceecCCcccCCCCCCC-CCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-IQ-RLVYVSTYNVVFGGKEIVNGNESL-PYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-vk-rlV~~SS~~vvyg~~~~~~~~E~~-p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++....++|+.+|+|++++|++.+ ++ +++++|+...+.. + ...|.. ++.| .+.|+.||..+|+++..+
T Consensus 96 ~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~--~--~~~~~~~~~~p----~~~yg~tkl~~er~~~~~ 167 (327)
T 1y7t_A 96 MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA--L--IAYKNAPGLNP----RNFTAMTRLDHNRAKAQL 167 (327)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH--H--HHHHTCTTSCG----GGEEECCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH--H--HHHHHcCCCCh----hheeccchHHHHHHHHHH
Confidence 4567889999999999999999986 65 7777776431110 0 001222 2333 578999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRI 118 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~l 118 (389)
.. ..|++++++||++||||+++..++.+
T Consensus 168 a~-------~~g~~~~~vr~~~V~G~h~~~~~~~~ 195 (327)
T 1y7t_A 168 AK-------KTGTGVDRIRRMTVWGNHSSTMFPDL 195 (327)
T ss_dssp HH-------HHTCCGGGEECCEEEBCSSTTCEEEC
T ss_pred HH-------HhCcChhheeeeEEEcCCCCeEEEEe
Confidence 52 25799999999999999776444433
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.92 E-value=1e-05 Score=74.46 Aligned_cols=139 Identities=10% Similarity=0.106 Sum_probs=86.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++... +..++|++||..+ +.+.+ . ...|+.||+..+.+.+.+.
T Consensus 113 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~-~~~~~-----------~----~~~Y~asKaa~~~l~~~la 176 (262)
T 3ksu_A 113 AEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLL-AAYTG-----------F----YSTYAGNKAPVEHYTRAAS 176 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHH-HHHHC-----------C----CCC-----CHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhh-ccCCC-----------C----CchhHHHHHHHHHHHHHHH
Confidence 355678899999999999999875 4568999999875 32111 1 4689999999999888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
... ...|+++.++.|+.|..+..... -.... ...........+...+|+|++++.++..
T Consensus 177 ~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~~~~r~~~pedvA~~v~~L~s~------- 236 (262)
T 3ksu_A 177 KEL----MKQQISVNAIAPGPMDTSFFYGQETKEST---------AFHKSQAMGNQLTKIEDIAPIIKFLTTD------- 236 (262)
T ss_dssp HHT----TTTTCEEEEEEECCCCTHHHHTCC---------------------CCCCSCCGGGTHHHHHHHHTT-------
T ss_pred HHH----HHcCcEEEEEeeCCCcCccccccCchHHH---------HHHHhcCcccCCCCHHHHHHHHHHHcCC-------
Confidence 321 23689999999998864311000 00000 0111112223467899999999998851
Q ss_pred CCCCCCCCCceEEEeCCCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~~s 184 (389)
.....|+.+++.+|....
T Consensus 237 ---~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 237 ---GWWINGQTIFANGGYTTR 254 (262)
T ss_dssp ---TTTCCSCEEEESTTCCCC
T ss_pred ---CCCccCCEEEECCCccCC
Confidence 234579999888776444
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=1.3e-05 Score=73.70 Aligned_cols=140 Identities=11% Similarity=-0.028 Sum_probs=92.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+-.++|++||..+..+ ... ...|+.||+..+.+.+.
T Consensus 109 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 172 (265)
T 3lf2_A 109 EAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP------------EPH----MVATSAARAGVKNLVRS 172 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC------------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC------------CCC----chhhHHHHHHHHHHHHH
Confidence 45677899999999999999965 34568999999875211 111 47899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
+.... ...|+++.+++|+.|..+.... .............. .....+...+|+|++++.
T Consensus 173 la~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~p~~r~~~pedvA~~v~f 241 (265)
T 3lf2_A 173 MAFEF----APKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQ-------IPLGRLGKPIEAARAILF 241 (265)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTT-------CTTCSCBCHHHHHHHHHH
T ss_pred HHHHh----cccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccC-------CCcCCCcCHHHHHHHHHH
Confidence 64211 2258999999999997652110 11112222221110 111246789999999998
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
++... .....|+.+++.+|..
T Consensus 242 L~s~~---------~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 242 LASPL---------SAYTTGSHIDVSGGLS 262 (265)
T ss_dssp HHSGG---------GTTCCSEEEEESSSCC
T ss_pred HhCch---------hcCcCCCEEEECCCCc
Confidence 87521 3456799999887753
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.2e-05 Score=74.30 Aligned_cols=121 Identities=12% Similarity=0.068 Sum_probs=82.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++++++. +.+..++|++||..+ +.+ ..+ ...|+.||+..+.+.+.
T Consensus 109 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~ 172 (266)
T 3p19_A 109 NEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG-KKT-----------FPD----HAAYCGTKFAVHAISEN 172 (266)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh-CCC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 3556789999999999877774 557789999999875 211 111 46899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++.+++|+.|..+...... ........... . ....+++.+|+|++++.++.
T Consensus 173 la~e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~-------~~~r~~~pedvA~av~~l~~ 234 (266)
T 3p19_A 173 VREEV----AASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWR-V-------DMGGVLAADDVARAVLFAYQ 234 (266)
T ss_dssp HHHHH----GGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHH-H-------HTTCCBCHHHHHHHHHHHHH
T ss_pred HHHHh----cccCcEEEEEeeCccccchhhcccchhhhHHHHhhc-c-------cccCCCCHHHHHHHHHHHHc
Confidence 64211 225899999999999887433211 11111111100 0 11237889999999999987
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=5e-05 Score=70.83 Aligned_cols=137 Identities=10% Similarity=-0.030 Sum_probs=92.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+..+++|+.|+.++++++.. .+ ..++|++||..+ +.+ ... ...|+.||+..
T Consensus 141 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~ 204 (291)
T 1e7w_A 141 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMT-NQP-----------LLG----YTIYTMAKGAL 204 (291)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTT-TSC-----------CTT----CHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhh-cCC-----------CCC----CchhHHHHHHH
Confidence 45567899999999999999874 34 579999999874 221 111 47899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.+.+.+.... ...|+++.+++|+.|..+. . .-+..........+. + .-+...+|+|++++.++..
T Consensus 205 ~~l~~~la~e~----~~~gI~vn~v~PG~v~T~~-~-~~~~~~~~~~~~~p~---~-----~r~~~pedvA~~v~~l~s~ 270 (291)
T 1e7w_A 205 EGLTRSAALEL----APLQIRVNGVGPGLSVLVD-D-MPPAVWEGHRSKVPL---Y-----QRDSSAAEVSDVVIFLCSS 270 (291)
T ss_dssp HHHHHHHHHHH----GGGTEEEEEEEESSBCCGG-G-SCHHHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHH----HhcCeEEEEEeeCCccCCc-c-CCHHHHHHHHhhCCC---C-----CCCCCHHHHHHHHHHHhCC
Confidence 98888764211 2258999999999986654 2 113333333322111 0 0357899999999998852
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. .....|+.+++.+|..
T Consensus 271 ~---------~~~itG~~i~vdGG~~ 287 (291)
T 1e7w_A 271 K---------AKYITGTCVKVDGGYS 287 (291)
T ss_dssp G---------GTTCCSCEEEESTTGG
T ss_pred c---------ccCccCcEEEECCCcc
Confidence 1 3345788888887754
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.85 E-value=1.3e-05 Score=74.05 Aligned_cols=112 Identities=14% Similarity=0.017 Sum_probs=79.2
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++. +.+.+++|++||..+ +.+.+ ....|+.||+..|.+++.+
T Consensus 131 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~---------------~~~~Y~~sK~a~~~l~~~l 194 (272)
T 1yb1_A 131 QIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG-HVSVP---------------FLLAYCSSKFAAVGFHKTL 194 (272)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC--CCCHH---------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhh-cCCCC---------------CchhHHHHHHHHHHHHHHH
Confidence 456789999999888777774 467889999999885 32211 1468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ......|++++++||+.|.++...... .....+++.+|+|++++.++.
T Consensus 195 a~e~-~~~~~~gi~v~~v~Pg~v~t~~~~~~~-------------------~~~~~~~~~~dva~~i~~~~~ 246 (272)
T 1yb1_A 195 TDEL-AALQITGVKTTCLCPNFVNTGFIKNPS-------------------TSLGPTLEPEEVVNRLMHGIL 246 (272)
T ss_dssp HHHH-HHTTCTTEEEEEEEETHHHHCSTTCTH-------------------HHHCCCCCHHHHHHHHHHHHH
T ss_pred HHHH-HHhCCCCeEEEEEeCCcccCCcccccc-------------------ccccCCCCHHHHHHHHHHHHH
Confidence 4210 000025899999999999887532100 011347899999999999987
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=2.5e-05 Score=78.48 Aligned_cols=111 Identities=16% Similarity=0.155 Sum_probs=80.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+.+.++++|+.|+.|+.+++.+.+.++||++||..+++|.. ....|+.+|...|.+..+...
T Consensus 329 ~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~----------------g~~~Yaaaka~l~~la~~~~~-- 390 (486)
T 2fr1_A 329 RIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP----------------GLGGYAPGNAYLDGLAQQRRS-- 390 (486)
T ss_dssp HHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT----------------TCTTTHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC----------------CCHHHHHHHHHHHHHHHHHHh--
Confidence 45677888999999999999999999999999987655531 147899999999988877642
Q ss_pred CCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.|+++++++|+.+++++... . ..... . ......+++.+|+++++..+++
T Consensus 391 ------~gi~v~~i~pG~~~~~gm~~---~----~~~~~----~--~~~g~~~i~~e~~a~~l~~~l~ 439 (486)
T 2fr1_A 391 ------DGLPATAVAWGTWAGSGMAE---G----PVADR----F--RRHGVIEMPPETACRALQNALD 439 (486)
T ss_dssp ------TTCCCEEEEECCBC-----------------------C--TTTTEECBCHHHHHHHHHHHHH
T ss_pred ------cCCeEEEEECCeeCCCcccc---h----hHHHH----H--HhcCCCCCCHHHHHHHHHHHHh
Confidence 58999999999998764211 0 00000 0 1123568999999999999987
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.5e-05 Score=75.67 Aligned_cols=126 Identities=13% Similarity=0.151 Sum_probs=87.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++. +.+..|+|++||....++.. + ...|+.||+..+.+.+.
T Consensus 114 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~------------~----~~~Y~aSK~a~~~~~~~ 177 (319)
T 1gz6_A 114 EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF------------G----QANYSAAKLGLLGLANT 177 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------------T----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC------------C----CHHHHHHHHHHHHHHHH
Confidence 3567789999999999998884 45678999999987555421 1 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+..+. ...|+++.+++|+.+ .+-..... +.....++..+|++++++.++..
T Consensus 178 la~el----~~~gI~vn~v~PG~~-t~~~~~~~------------------~~~~~~~~~p~dvA~~~~~l~s~------ 228 (319)
T 1gz6_A 178 LVIEG----RKNNIHCNTIAPNAG-SRMTETVM------------------PEDLVEALKPEYVAPLVLWLCHE------ 228 (319)
T ss_dssp HHHHT----GGGTEEEEEEEEECC-STTTGGGS------------------CHHHHHHSCGGGTHHHHHHHTST------
T ss_pred HHHHh----cccCEEEEEEeCCCc-cccccccC------------------ChhhhccCCHHHHHHHHHHHhCc------
Confidence 64321 235899999999876 22111000 01122457889999999888751
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
.....|+.|++.+|.
T Consensus 229 ----~~~~tG~~~~v~GG~ 243 (319)
T 1gz6_A 229 ----SCEENGGLFEVGAGW 243 (319)
T ss_dssp ----TCCCCSCEEEEETTE
T ss_pred ----hhhcCCCEEEECCCe
Confidence 223478888888774
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.84 E-value=4.6e-05 Score=69.87 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=75.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++.. .+..++|++||..+ +. +..+ ...|+.||+..|.+++.
T Consensus 129 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~-----------~~~~----~~~Y~asKaa~~~l~~~ 192 (262)
T 3rkr_A 129 AEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG-KN-----------PVAD----GAAYTASKWGLNGLMTS 192 (262)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCS-SC-----------CCTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhh-cC-----------CCCC----CchHHHHHHHHHHHHHH
Confidence 35567899999999999999754 56789999999875 21 1111 47899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++.+++|+.|..+-.... .. ......++..+|+|+++..++.
T Consensus 193 la~e~----~~~gi~v~~v~PG~v~t~~~~~~--------~~---------~~~~~~~~~p~dvA~~v~~l~s 244 (262)
T 3rkr_A 193 AAEEL----RQHQVRVSLVAPGSVRTEFGVGL--------SA---------KKSALGAIEPDDIADVVALLAT 244 (262)
T ss_dssp HHHHH----GGGTCEEEEEEECCC---------------------------------CCCHHHHHHHHHHHHT
T ss_pred HHHHh----hhcCcEEEEEecCCCcCCccccc--------cc---------ccccccCCCHHHHHHHHHHHhc
Confidence 64211 22589999999998865432210 00 0112346789999999999886
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.8e-05 Score=73.30 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=89.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+ +. +..+ ...|+.||+..+.+.+.
T Consensus 131 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~-~~-----------~~~~----~~~Y~asKaa~~~l~~~ 194 (275)
T 4imr_A 131 NDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ-LR-----------PKSV----VTAYAATKAAQHNLIQS 194 (275)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TS-----------CCTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh-CC-----------CCCC----chhhHHHHHHHHHHHHH
Confidence 3556789999999999999984 456679999999875 21 1111 35699999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
+.... ...|+++.+++|+.|..+..... .+........... ...-+...+|+|++++.++...
T Consensus 195 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--------p~~r~~~pedvA~~v~fL~s~~-- 260 (275)
T 4imr_A 195 QARDF----AGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN--------WMGRAGRPEEMVGAALFLASEA-- 260 (275)
T ss_dssp HHHHH----GGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS--------TTCSCBCGGGGHHHHHHHHSGG--
T ss_pred HHHHh----cccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC--------ccCCCcCHHHHHHHHHHHcCcc--
Confidence 64211 22589999999999976521100 0111111111110 0112567899999999887521
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
..-..|+.+++.+|
T Consensus 261 -------a~~itG~~i~vdGG 274 (275)
T 4imr_A 261 -------CSFMTGETIFLTGG 274 (275)
T ss_dssp -------GTTCCSCEEEESSC
T ss_pred -------cCCCCCCEEEeCCC
Confidence 33467999988765
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.78 E-value=2.5e-05 Score=71.30 Aligned_cols=119 Identities=7% Similarity=-0.055 Sum_probs=71.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++. +.+..++|++||..+.++ ... ...|+.||+..+.+.+.
T Consensus 105 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~ 168 (252)
T 3h7a_A 105 RVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG------------GSG----FAAFASAKFGLRAVAQS 168 (252)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC------------CCC----CccHHHHHHHHHHHHHH
Confidence 3567789999999999999884 456679999999875322 111 47899999999988887
Q ss_pred hCCCCCCCCCCCCceE-EEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYT-CAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~-~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++ .++.|+.|..+......+...... ....... +...+|+|++++.++.
T Consensus 169 la~e~----~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~~~-~~~pedvA~~~~~l~s 228 (252)
T 3h7a_A 169 MAREL----MPKNIHVAHLIIDSGVDTAWVRERREQMFGKD---------ALANPDL-LMPPAAVAGAYWQLYQ 228 (252)
T ss_dssp HHHHH----GGGTEEEEEEEEC-------------------------------------CCHHHHHHHHHHHHH
T ss_pred HHHHh----hhcCCEEEEEecCCccCChhhhccchhhhhhh---------hhcCCcc-CCCHHHHHHHHHHHHh
Confidence 64311 2257999 899999987654332212111111 1111222 8899999999999986
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00014 Score=65.15 Aligned_cols=110 Identities=16% Similarity=0.073 Sum_probs=78.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++++++... +..++|.+||....++ .+ ....|+.||+..|.+.+.+
T Consensus 102 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----------~~------~~~~Y~~sKaa~~~~~~~l 165 (235)
T 3l77_A 102 EEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL----------IP------YGGGYVSTKWAARALVRTF 165 (235)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC----------CT------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc----------CC------CcchHHHHHHHHHHHHHHH
Confidence 456788999999999999999653 3457888887664221 11 1368999999999998886
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.. ...++++.+++|+.|-.+-.... . .......++..+|+|++++.++.
T Consensus 166 ~~------~~~~i~v~~v~PG~v~T~~~~~~----------------~-~~~~~~~~~~p~dva~~v~~l~~ 214 (235)
T 3l77_A 166 QI------ENPDVRFFELRPGAVDTYFGGSK----------------P-GKPKEKGYLKPDEIAEAVRCLLK 214 (235)
T ss_dssp HH------HCTTSEEEEEEECSBSSSTTTCC----------------S-CCCGGGTCBCHHHHHHHHHHHHT
T ss_pred hh------cCCCeEEEEEeCCcccccccccc----------------C-CcccccCCCCHHHHHHHHHHHHc
Confidence 32 23689999999999865432210 0 01112257899999999999987
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.76 E-value=2.6e-05 Score=72.15 Aligned_cols=119 Identities=9% Similarity=0.035 Sum_probs=73.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+.+..+++|+.|+.++.+++... + -.++|++||..+..+ ..+ ...|+.||+..|.+.
T Consensus 125 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~ 188 (272)
T 4dyv_A 125 AQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP------------RPY----SAPYTATKHAITGLT 188 (272)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC------------CTT----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC------------CCC----chHHHHHHHHHHHHH
Confidence 345788999999999988887653 2 358999999875211 111 478999999999998
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.+.... ...|+++.+++|+.|..+-.......... . ........+.+++|+|++++.++.
T Consensus 189 ~~la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--------~--~~~~~~~~~~~pedvA~~v~fL~s 249 (272)
T 4dyv_A 189 KSTSLDG----RVHDIACGQIDIGNADTPMAQKMKAGVPQ--------A--DLSIKVEPVMDVAHVASAVVYMAS 249 (272)
T ss_dssp HHHHHHH----GGGTEEEEEEEEEECC----------------------------------CHHHHHHHHHHHHH
T ss_pred HHHHHHh----CccCEEEEEEEECcccChhhhhhcccchh--------h--hhcccccCCCCHHHHHHHHHHHhC
Confidence 8764211 22589999999999987643221111000 0 001112347899999999999987
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00011 Score=73.13 Aligned_cols=138 Identities=13% Similarity=-0.019 Sum_probs=89.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++.+++... +..+||++||...+.+.. ....|+.||+..+.+...
T Consensus 310 ~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~----------------g~~~YaasKaal~~l~~~ 373 (454)
T 3u0b_A 310 KRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR----------------GQTNYATTKAGMIGLAEA 373 (454)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT----------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC----------------CCHHHHHHHHHHHHHHHH
Confidence 456678999999999999999876 567999999988654321 147899999976666655
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..... ...|+++.++.|+.|..+................. ....+...+|+++++..++...
T Consensus 374 la~e~----~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~l~r~g~pedvA~~v~fL~s~~----- 435 (454)
T 3u0b_A 374 LAPVL----ADKGITINAVAPGFIETKMTEAIPLATREVGRRLN---------SLFQGGQPVDVAELIAYFASPA----- 435 (454)
T ss_dssp HHHHH----HTTTCEEEEEEECSBCC----------CHHHHHSB---------TTSSCBCHHHHHHHHHHHHCGG-----
T ss_pred HHHHh----hhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhc---------cccCCCCHHHHHHHHHHHhCCc-----
Confidence 43110 12689999999999976643211100001111111 1123467899999998887521
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+++++.+|..
T Consensus 436 ----a~~itG~~i~vdGG~~ 451 (454)
T 3u0b_A 436 ----SNAVTGNTIRVCGQAM 451 (454)
T ss_dssp ----GTTCCSCEEEESSSBS
T ss_pred ----cCCCCCcEEEECCccc
Confidence 3456799998877653
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.75 E-value=5.7e-05 Score=67.72 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=75.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCC---eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQ---RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvk---rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++++++.....+ ++|++||..+ +.+ ..+ ...|+.||+..+.+.+.+
T Consensus 94 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~~~~~l 157 (230)
T 3guy_A 94 EQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA-QQP-----------KAQ----ESTYCAVKWAVKGLIESV 157 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc-CCC-----------CCC----CchhHHHHHHHHHHHHHH
Confidence 355678899999999999999765322 8999999875 211 111 478999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++.+++|+.|..+-... ... ......+.+.+|+|++++.++.
T Consensus 158 a~e~----~~~gi~v~~v~PG~v~t~~~~~--------~~~---------~~~~~~~~~~~dvA~~i~~l~~ 208 (230)
T 3guy_A 158 RLEL----KGKPMKIIAVYPGGMATEFWET--------SGK---------SLDTSSFMSAEDAALMIHGALA 208 (230)
T ss_dssp HHHT----TTSSCEEEEEEECCC---------------------------------CCCHHHHHHHHHHHCC
T ss_pred HHHH----HhcCeEEEEEECCcccChHHHh--------cCC---------CCCcccCCCHHHHHHHHHHHHh
Confidence 5321 3368999999999887542211 000 0112357899999999999875
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.74 E-value=1.9e-05 Score=72.48 Aligned_cols=135 Identities=17% Similarity=0.171 Sum_probs=86.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++... +..++|++||..+.++. + . ...|+.||+..+.+.+.+
T Consensus 108 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~--~----~~~Y~asK~a~~~~~~~l 171 (262)
T 1zem_A 108 DFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP----------P--N----MAAYGTSKGAIIALTETA 171 (262)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC----------T--T----BHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC----------C--C----CchHHHHHHHHHHHHHHH
Confidence 45778899999999999998753 56799999998753221 1 1 468999999888877765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCC---------------HHH-HHHHHHcCCCcceecCCCccccceeHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---------------LPR-IVSLAKLGLVPFKIGEPSVKTDWIYVDNLV 147 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---------------~~~-li~~~~~g~~~~~~g~~~~~~~~v~vdDla 147 (389)
.... ...|+++.+++|+.|..+..... -+. ....+....+ ...+...+|+|
T Consensus 172 a~e~----~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~p~dvA 238 (262)
T 1zem_A 172 ALDL----APYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP---------MRRYGDINEIP 238 (262)
T ss_dssp HHHH----GGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST---------TSSCBCGGGSH
T ss_pred HHHH----HhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC---------CCCCcCHHHHH
Confidence 4210 12589999999998865421100 011 1111111111 11367889999
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 148 LALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 148 ~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
++++.++... .....|+.+.+.+|
T Consensus 239 ~~v~~l~s~~---------~~~itG~~i~vdGG 262 (262)
T 1zem_A 239 GVVAFLLGDD---------SSFMTGVNLPIAGG 262 (262)
T ss_dssp HHHHHHHSGG---------GTTCCSCEEEESCC
T ss_pred HHHHHHcCch---------hcCcCCcEEecCCC
Confidence 9999887521 23457888877654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0001 Score=67.79 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=75.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+..+ ... ...|+.||+..+.+.+.
T Consensus 103 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~------------~~~----~~~Y~asKaal~~l~~~ 166 (264)
T 3tfo_A 103 DEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV------------VPT----AAVYCATKFAVRAISDG 166 (264)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc------------CCC----ChhHHHHHHHHHHHHHH
Confidence 45677899999999999888754 46679999999875221 111 46899999999999888
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+... . .|+++.+++|+.|..+-....... ....... .....+...+|+|++++.++.
T Consensus 167 la~e-----~-~gIrvn~v~PG~v~T~~~~~~~~~--------~~~~~~~--~~~~~~~~pedvA~~v~~l~s 223 (264)
T 3tfo_A 167 LRQE-----S-TNIRVTCVNPGVVESELAGTITHE--------ETMAAMD--TYRAIALQPADIARAVRQVIE 223 (264)
T ss_dssp HHHH-----C-SSEEEEEEEECCC---------------------------------CCCHHHHHHHHHHHHH
T ss_pred HHHh-----C-CCCEEEEEecCCCcCcccccccch--------hHHHHHH--hhhccCCCHHHHHHHHHHHhc
Confidence 7532 1 389999999999876533211100 0000000 011124789999999999987
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0001 Score=74.41 Aligned_cols=111 Identities=16% Similarity=0.118 Sum_probs=82.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
+.+.++++|+.|+.|+.+++... +.++||++||...++|.. ....|+.+|+..|.+......
T Consensus 358 ~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~----------------g~~~YaaaKa~ld~la~~~~~- 420 (511)
T 2z5l_A 358 SFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA----------------GQGAYAAANAALDALAERRRA- 420 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT----------------TBHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC----------------CCHHHHHHHHHHHHHHHHHHH-
Confidence 45667899999999999999887 788999999987666531 147899999999999987642
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.|+++++++|+.+-+.+...... ...+.. ....+++.+|+++++..++.
T Consensus 421 -------~gi~v~sv~pG~~~~tgm~~~~~--~~~~~~-----------~g~~~l~~e~~a~~l~~al~ 469 (511)
T 2z5l_A 421 -------AGLPATSVAWGLWGGGGMAAGAG--EESLSR-----------RGLRAMDPDAAVDALLGAMG 469 (511)
T ss_dssp -------TTCCCEEEEECCBCSTTCCCCHH--HHHHHH-----------HTBCCBCHHHHHHHHHHHHH
T ss_pred -------cCCcEEEEECCcccCCccccccc--HHHHHh-----------cCCCCCCHHHHHHHHHHHHh
Confidence 68999999999884333222211 111111 11346899999999999987
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=5.7e-05 Score=68.65 Aligned_cols=118 Identities=11% Similarity=0.068 Sum_probs=78.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++.. .+ .++|++||..+..+ ..+ ...|+.||+..+.+.+.+
T Consensus 107 ~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~------------~~~----~~~Y~asK~a~~~~~~~l 169 (247)
T 2jah_A 107 DWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN------------VRN----AAVYQATKFGVNAFSETL 169 (247)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC------------CTT----CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC------------CCC----CcHHHHHHHHHHHHHHHH
Confidence 4567899999999999999864 35 79999999874211 111 468999999998887765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++.+++|+.|..+...... ...-..... .++ +..+...+|+|++++.++.
T Consensus 170 a~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-----~~~----~~~~~~pedvA~~v~~l~s 229 (247)
T 2jah_A 170 RQEV----TERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ-----RIS----QIRKLQAQDIAEAVRYAVT 229 (247)
T ss_dssp HHHH----GGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH-----HTT----TSCCBCHHHHHHHHHHHHH
T ss_pred HHHh----cccCcEEEEEECCCCCCcchhcccchhhHHHHHh-----ccc----ccCCCCHHHHHHHHHHHhC
Confidence 4210 125899999999999876322111 111111110 001 1125899999999999886
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=2.7e-05 Score=72.29 Aligned_cols=136 Identities=16% Similarity=0.126 Sum_probs=88.8
Q ss_pred chhhhHhhhhHHHHHHHHHHHcC---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEFG---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+..+++|+.|+.++++++...- -.++|++||..+.++ ... ...|+.||+..+.+.+.+..
T Consensus 108 ~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~~~la~ 171 (281)
T 3zv4_A 108 FDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP------------NGG----GPLYTATKHAVVGLVRQMAF 171 (281)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS------------SSS----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC------------CCC----CchhHHHHHHHHHHHHHHHH
Confidence 56788999999999999986532 259999999875221 111 46899999999998887653
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC---HH-------HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH---LP-------RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~-------~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.. . ..+++.++.|+.|..+-.... .. .....+....+ ...+...+|++++++.++.
T Consensus 172 e~----~-~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~fL~s 237 (281)
T 3zv4_A 172 EL----A-PHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP---------IGRMPALEEYTGAYVFFAT 237 (281)
T ss_dssp HH----T-TTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT---------TSSCCCGGGGSHHHHHHHS
T ss_pred Hh----c-CCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC---------CCCCCCHHHHHHHHHHhhc
Confidence 21 1 239999999999977632210 00 01122222221 1236778999999988874
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
. + ......|+.+++.+|..
T Consensus 238 ~---~-----~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 238 R---G-----DSLPATGALLNYDGGMG 256 (281)
T ss_dssp T---T-----TSTTCSSCEEEESSSGG
T ss_pred c---c-----ccccccCcEEEECCCCc
Confidence 1 0 13346899999988754
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.61 E-value=4.8e-05 Score=69.34 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=76.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+.++. .+ ...|+.||+..+.+.+.
T Consensus 108 ~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~----~~~Y~asKaa~~~l~~~ 171 (250)
T 3nyw_A 108 DNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF------------AD----GGIYGSTKFALLGLAES 171 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------CC----TTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC------------CC----CcchHHHHHHHHHHHHH
Confidence 3457889999999999999984 4567799999998753321 11 47899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++.+++|+.|..+ +..... . ......+++.+|++++++.++.
T Consensus 172 la~e~----~~~gi~vn~v~PG~v~T~--------~~~~~~--~-------~~~~~~~~~p~dva~~v~~l~s 223 (250)
T 3nyw_A 172 LYREL----APLGIRVTTLCPGWVNTD--------MAKKAG--T-------PFKDEEMIQPDDLLNTIRCLLN 223 (250)
T ss_dssp HHHHH----GGGTEEEEEEEESSBCSH--------HHHHTT--C-------CSCGGGSBCHHHHHHHHHHHHT
T ss_pred HHHHh----hhcCcEEEEEecCcccCc--------hhhhcC--C-------CcccccCCCHHHHHHHHHHHHc
Confidence 64211 225899999999988643 111111 1 1122357899999999999986
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00011 Score=68.20 Aligned_cols=115 Identities=11% Similarity=0.047 Sum_probs=78.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++... +..++|++||..+..+. ..+ ...|+.||+..+.+.+.
T Consensus 115 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~----~~~Y~asKaal~~~~~~ 179 (285)
T 3sc4_A 115 KRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-----------WLR----PTPYMMAKYGMTLCALG 179 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-----------GSC----SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-----------CCC----CchHHHHHHHHHHHHHH
Confidence 345678889999999999999765 56799999997742211 011 47899999999999887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++.++.|+.+.. + .+........ .....+...+|+|++++.++.
T Consensus 180 la~e~----~~~gI~vn~v~PG~~v~---t----~~~~~~~~~~--------~~~~r~~~pedvA~~~~~l~s 233 (285)
T 3sc4_A 180 IAEEL----RDAGIASNTLWPRTTVA---T----AAVQNLLGGD--------EAMARSRKPEVYADAAYVVLN 233 (285)
T ss_dssp HHHHT----GGGTCEEEEEECSSCBC---C----HHHHHHHTSC--------CCCTTCBCTHHHHHHHHHHHT
T ss_pred HHHHh----cccCcEEEEEeCCCccc---c----HHHHhhcccc--------ccccCCCCHHHHHHHHHHHhC
Confidence 65321 23689999999984321 1 2222222221 112246788999999999986
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.55 E-value=6e-05 Score=68.18 Aligned_cols=126 Identities=17% Similarity=0.083 Sum_probs=85.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++++++. +.+..++|++||..+..+ ..+ ...|+.||+..|.+.+.
T Consensus 117 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~----~~~Y~~sK~a~~~~~~~ 180 (247)
T 3i1j_A 117 EDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG------------RAN----WGAYGVSKFATEGLMQT 180 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC------------CTT----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC------------CCC----cchhHHHHHHHHHHHHH
Confidence 4567788999999999999994 456679999999875221 111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+..+. ....++++.++.|+.|..+ +....... .....+...+|++++++.++...
T Consensus 181 la~e~---~~~~~i~v~~v~PG~v~t~--------~~~~~~~~---------~~~~~~~~p~dva~~~~~l~s~~----- 235 (247)
T 3i1j_A 181 LADEL---EGVTAVRANSINPGATRTG--------MRAQAYPD---------ENPLNNPAPEDIMPVYLYLMGPD----- 235 (247)
T ss_dssp HHHHH---TTTSSEEEEEEECCCCSSH--------HHHHHSTT---------SCGGGSCCGGGGTHHHHHHHSGG-----
T ss_pred HHHHh---cCCCCeEEEEEecCcccCc--------cchhcccc---------cCccCCCCHHHHHHHHHHHhCch-----
Confidence 64311 0115899999999887532 22211111 12234677899999999887521
Q ss_pred CCCCCCCCCCceEEE
Q 016468 163 GQKGRPIASGQPYFV 177 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i 177 (389)
.....|+.+++
T Consensus 236 ----~~~itG~~i~~ 246 (247)
T 3i1j_A 236 ----STGINGQALNA 246 (247)
T ss_dssp ----GTTCCSCEEEC
T ss_pred ----hccccCeeecC
Confidence 33456777664
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00014 Score=65.64 Aligned_cols=111 Identities=15% Similarity=0.042 Sum_probs=76.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++++++...- -.++|++||..+.++. + . ...|+.||+..+.+.+.+
T Consensus 99 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~----------~--~----~~~Y~asKaa~~~~~~~l 162 (235)
T 3l6e_A 99 EQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK----------A--N----ESLYCASKWGMRGFLESL 162 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC----------S--S----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC----------C--C----CcHHHHHHHHHHHHHHHH
Confidence 4567889999999999999986431 1289999997753221 1 1 468999999999988876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++.+++|+.|-.+-.... . . .....+...+|+|++++.++.
T Consensus 163 a~e~----~~~gi~v~~v~PG~v~T~~~~~~-~---~--------------~~~~~~~~pedvA~~v~~l~~ 212 (235)
T 3l6e_A 163 RAEL----KDSPLRLVNLYPSGIRSEFWDNT-D---H--------------VDPSGFMTPEDAAAYMLDALE 212 (235)
T ss_dssp HHHT----TTSSEEEEEEEEEEECCCC-----------------------------CBCHHHHHHHHHHHTC
T ss_pred HHHh----hccCCEEEEEeCCCccCcchhcc-C---C--------------CCCcCCCCHHHHHHHHHHHHh
Confidence 5321 23689999999999865432210 0 0 011247899999999999885
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=7.6e-05 Score=68.14 Aligned_cols=122 Identities=9% Similarity=-0.008 Sum_probs=77.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+.+..+++|+.|+.++++++...- ..++|++||..+ +.+ ..+ ...|+.||+..|.+.
T Consensus 117 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asKaa~~~~~ 180 (259)
T 1oaa_A 117 AEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA-LQP-----------YKG----WGLYCAGKAARDMLY 180 (259)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG-TSC-----------CTT----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh-cCC-----------CCC----ccHHHHHHHHHHHHH
Confidence 4567789999999999999997652 347999999875 211 111 478999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHh
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.+.... .++++.++.|+.|-.+- ...+.... .... ...+........+...+|+|++++.++.
T Consensus 181 ~~la~e~------~~i~vn~v~PG~v~T~~----~~~~~~~~-~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~ 245 (259)
T 1oaa_A 181 QVLAAEE------PSVRVLSYAPGPLDNDM----QQLARETS-KDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQ 245 (259)
T ss_dssp HHHHHHC------TTEEEEEEECCSBSSHH----HHHHHHHC-SCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHH
T ss_pred HHHHhhC------CCceEEEecCCCcCcch----HHHHhhcc-CChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHh
Confidence 8875321 23999999998874321 11111000 0000 0000000001236789999999998886
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00032 Score=67.17 Aligned_cols=114 Identities=14% Similarity=0.060 Sum_probs=79.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.+++++|.. .+..++|++||... +.+. +..+ ...|+.||+..+.+.+.
T Consensus 151 ~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~-~~~~---------~~~~----~~~Y~aSKaal~~l~~~ 216 (346)
T 3kvo_A 151 KRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN-LNPV---------WFKQ----HCAYTIAKYGMSMYVLG 216 (346)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC-CCGG---------GTSS----SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH-cCCC---------CCCC----chHHHHHHHHHHHHHHH
Confidence 34577899999999999999954 45679999999874 2211 0111 47899999999999888
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+..+. . .++++.++.|+.+... .+.+.+... .....+...+|+|++++.++.
T Consensus 217 la~e~----~-~gIrvn~v~PG~~i~T-------~~~~~~~~~---------~~~~r~~~pedvA~~v~~L~s 268 (346)
T 3kvo_A 217 MAEEF----K-GEIAVNALWPKTAIHT-------AAMDMLGGP---------GIESQCRKVDIIADAAYSIFQ 268 (346)
T ss_dssp HHHHT----T-TTCEEEEEECSBCBCC-------HHHHHHCC-----------CGGGCBCTHHHHHHHHHHHT
T ss_pred HHHHh----c-CCcEEEEEeCCCcccc-------HHHHhhccc---------cccccCCCHHHHHHHHHHHHh
Confidence 75321 2 5799999999863322 222222111 112346789999999999986
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.49 E-value=4.9e-05 Score=70.57 Aligned_cols=113 Identities=18% Similarity=0.050 Sum_probs=77.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.|+.++++++... +.+++|++||..+ +.+ ..+ ...|+.||+..|.++..+.
T Consensus 129 ~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~-~~~-----------~~~----~~~Y~asK~a~~~~~~~l~ 192 (286)
T 1xu9_A 129 HVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG-KVA-----------YPM----VAAYSASKFALDGFFSSIR 192 (286)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG-TSC-----------CTT----CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccc-ccC-----------CCC----ccHHHHHHHHHHHHHHHHH
Confidence 44678999999999999998653 3469999999874 221 111 5789999999998887654
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ....++++++++|+.|..+. ......+ .....+++.+|+|++++.+++
T Consensus 193 ~e~~--~~~~~i~v~~v~Pg~v~t~~--------~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~ 244 (286)
T 1xu9_A 193 KEYS--VSRVNVSITLCVLGLIDTET--------AMKAVSG---------IVHMQAAPKEECALEIIKGGA 244 (286)
T ss_dssp HHHH--HHTCCCEEEEEEECCBCCHH--------HHHHSCG---------GGGGGCBCHHHHHHHHHHHHH
T ss_pred HHHh--hcCCCeEEEEeecCccCChh--------HHHhccc---------cccCCCCCHHHHHHHHHHHHh
Confidence 2100 01257999999999886431 1111111 122457899999999999987
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00024 Score=64.85 Aligned_cols=123 Identities=11% Similarity=0.065 Sum_probs=75.3
Q ss_pred cchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+.+.++|+.++.++.+++. +.+..++|++||..+ +.+ .+ ...|+.||+..|.+.+.+
T Consensus 113 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~------------~~----~~~Y~asK~a~~~~~~~l 175 (260)
T 2qq5_A 113 MWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQY------------MF----NVPYGVGKAACDKLAADC 175 (260)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGG-TSC------------CS----SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhh-cCC------------CC----CCchHHHHHHHHHHHHHH
Confidence 456788899999988777765 456789999999874 211 11 368999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.... ...|+++.+++|+.|..+-.......- .............+ ...+...+|+|++++.++.
T Consensus 176 a~e~----~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~pe~va~~v~~l~s 239 (260)
T 2qq5_A 176 AHEL----RRHGVSCVSLWPGIVQTELLKEHMAKE--EVLQDPVLKQFKSA--FSSAETTELSGKCVVALAT 239 (260)
T ss_dssp HHHH----GGGTCEEEEEECCCSCTTTC--------------------------CHHHHHHHHHHHHHHHHT
T ss_pred HHHh----ccCCeEEEEEecCccccHHHHHhhccc--cccchhHHHHHHhh--hccCCCHHHHHHHHHHHhc
Confidence 4210 125899999999999876432111100 00000000000000 0113578999999998885
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00086 Score=61.06 Aligned_cols=130 Identities=10% Similarity=0.132 Sum_probs=88.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+.++++|+.|+-++.+++... +-.++|.+||..+..+ .| ....|+.||+..+.+.+..
T Consensus 97 e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~----------~~------~~~~Y~asKaal~~ltk~l 160 (247)
T 3ged_A 97 EEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQS----------EP------DSEAYASAKGGIVALTHAL 160 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccC----------CC------CCHHHHHHHHHHHHHHHHH
Confidence 467889999999999988888543 2268999999875211 11 1468999999999888776
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.... . .++++..+-|+.|--+.......... ...+.- -+...+|+|.+++.++.
T Consensus 161 A~el----a-~~IrVN~I~PG~i~t~~~~~~~~~~~----~~~Pl~---------R~g~pediA~~v~fL~s-------- 214 (247)
T 3ged_A 161 AMSL----G-PDVLVNCIAPGWINVTEQQEFTQEDC----AAIPAG---------KVGTPKDISNMVLFLCQ-------- 214 (247)
T ss_dssp HHHH----T-TTSEEEEEEECSBCCCC---CCHHHH----HTSTTS---------SCBCHHHHHHHHHHHHH--------
T ss_pred HHHH----C-CCCEEEEEecCcCCCCCcHHHHHHHH----hcCCCC---------CCcCHHHHHHHHHHHHh--------
Confidence 5321 1 37999999999986554433333322 222111 14568999999998886
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
..-..|+.+.+.+|-
T Consensus 215 ---~~~iTG~~i~VDGG~ 229 (247)
T 3ged_A 215 ---QDFITGETIIVDGGM 229 (247)
T ss_dssp ---CSSCCSCEEEESTTG
T ss_pred ---CCCCCCCeEEECcCH
Confidence 345789999887774
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00012 Score=69.52 Aligned_cols=83 Identities=20% Similarity=0.160 Sum_probs=62.6
Q ss_pred cchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.|+.++++++ ++.+..++|++||..+..+ .+ ....|+.||+..|.+.+.+
T Consensus 106 ~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~----------~~------~~~~Y~aSK~a~~~~~~~l 169 (327)
T 1jtv_A 106 AVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG----------LP------FNDVYCASKFALEGLCESL 169 (327)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC----------CT------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC----------CC------CChHHHHHHHHHHHHHHHH
Confidence 46778999999999999997 4457789999999875221 11 1468999999999998876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPG 110 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~ 110 (389)
.... ...|+++++++|+.|..+-
T Consensus 170 a~el----~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 170 AVLL----LPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp HHHH----GGGTEEEEEEEECCBCC--
T ss_pred HHHh----hhcCcEEEEEEeCcccChH
Confidence 4210 1258999999999997653
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00041 Score=64.28 Aligned_cols=119 Identities=8% Similarity=0.047 Sum_probs=77.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----C--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----G--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+.+.++++|+.|+.++.+++... + -.++|++||..+..+ ..+ ...|+.||+..|.+.
T Consensus 134 ~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------------~~~----~~~Y~asKaa~~~l~ 197 (281)
T 4dry_A 134 EQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP------------RPN----SAPYTATKHAITGLT 197 (281)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC------------CTT----CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC------------CCC----ChhHHHHHHHHHHHH
Confidence 456678999999998888887653 2 458999999875221 111 578999999999888
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.+.... ...|+++.+++|+.|..+-.. ....+. ...........+...+|+|++++.++.
T Consensus 198 ~~la~e~----~~~gI~vn~v~PG~v~T~~~~--------~~~~~~--~~~~~~~~~~~~~~pedvA~~v~fL~s 258 (281)
T 4dry_A 198 KSTALDG----RMHDIACGQIDIGNAATDMTA--------RMSTGV--LQANGEVAAEPTIPIEHIAEAVVYMAS 258 (281)
T ss_dssp HHHHHHH----GGGTEEEEEEEEECBCC---------------CEE--ECTTSCEEECCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHh----cccCeEEEEEEECcCcChhhh--------hhcchh--hhhhhcccccCCCCHHHHHHHHHHHhC
Confidence 8764211 236899999999988764221 111110 000000112247889999999999987
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00073 Score=62.82 Aligned_cols=115 Identities=14% Similarity=0.015 Sum_probs=76.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCccc------------------------------CCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEI------------------------------VNG 53 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~------------------------------~~~ 53 (389)
+.+..+++|+.|+.++++++.. .+..|+|++||..+.++.... ...
T Consensus 144 ~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (311)
T 3o26_A 144 LAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENL 223 (311)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTC
T ss_pred hhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccc
Confidence 3456789999999999998854 456799999998764432110 000
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecC
Q 016468 54 NESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGE 133 (389)
Q Consensus 54 ~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~ 133 (389)
.+..... .....|+.||+..+.+.+.+..+ -.++++.++.||.|..+-...
T Consensus 224 ~~~~~~~---~~~~~Y~~SK~a~~~~~~~la~e------~~~i~v~~v~PG~v~T~~~~~-------------------- 274 (311)
T 3o26_A 224 IETNGWP---SFGAAYTTSKACLNAYTRVLANK------IPKFQVNCVCPGLVKTEMNYG-------------------- 274 (311)
T ss_dssp TTTTTCC---SSCHHHHHHHHHHHHHHHHHHHH------CTTSEEEEECCCSBCSGGGTT--------------------
T ss_pred cccccCc---ccchhhHHHHHHHHHHHHHHHhh------cCCceEEEecCCceecCCcCC--------------------
Confidence 0111111 12468999999999999887642 135899999999986542110
Q ss_pred CCccccceeHHHHHHHHHHHHh
Q 016468 134 PSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 134 ~~~~~~~v~vdDla~a~~~a~~ 155 (389)
......++.++.++.++.
T Consensus 275 ----~~~~~~~~~a~~~~~~~~ 292 (311)
T 3o26_A 275 ----IGNYTAEEGAEHVVRIAL 292 (311)
T ss_dssp ----CCSBCHHHHHHHHHHHHT
T ss_pred ----CCCCCHHHHHHHHHHHHh
Confidence 012467889999888875
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00076 Score=62.09 Aligned_cols=114 Identities=12% Similarity=0.088 Sum_probs=75.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+..++|++||..+. .+.. .. ....|+.||+..+.+.+.
T Consensus 112 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~-~~~~---------~~----~~~~Y~asKaal~~l~~~ 177 (274)
T 3e03_A 112 KRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSL-NPAW---------WG----AHTGYTLAKMGMSLVTLG 177 (274)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCC-CHHH---------HH----HCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhc-CCCC---------CC----CCchHHHHHHHHHHHHHH
Confidence 34567889999999999999865 456799999998742 2100 00 146799999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.... ...|+++.++.|+.+..... .... .+ .....+...+|+|++++.++.
T Consensus 178 la~e~----~~~gI~vn~v~PG~~v~T~~-------~~~~-~~---------~~~~~~~~pedvA~~v~~l~s 229 (274)
T 3e03_A 178 LAAEF----GPQGVAINALWPRTVIATDA-------INML-PG---------VDAAACRRPEIMADAAHAVLT 229 (274)
T ss_dssp HHHHH----GGGTCEEEEEECSBCBCC---------------C---------CCGGGSBCTHHHHHHHHHHHT
T ss_pred HHHHh----hhcCEEEEEEECCcccccch-------hhhc-cc---------ccccccCCHHHHHHHHHHHhC
Confidence 64311 22579999999985432211 1111 11 112236789999999999885
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00064 Score=64.05 Aligned_cols=141 Identities=9% Similarity=0.020 Sum_probs=74.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCC-CcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHV-DSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~-~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.|+.++++++...- -.++|++||..+..+ .+ . . ..|+.||+..+.+.+.+.
T Consensus 158 ~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------~~--~----~~~~Y~asKaal~~l~~~la 221 (319)
T 2ptg_A 158 GYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKV----------IP--G----YGGGMSSAKAALESDCRTLA 221 (319)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHH
T ss_pred HHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccc----------cC--c----cchhhHHHHHHHHHHHHHHH
Confidence 456788999999999999998751 158999999874221 11 0 2 479999999998887764
Q ss_pred CCCCCCCC-CCCceEEEEecCceecCCCCCCHH----HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 85 GRPFKKNN-RKCLYTCAVRPAAIYGPGEERHLP----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 85 ~~~~~~~~-~~gl~~~ilRp~~IyGp~~~~~~~----~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
... . ..|+++.+++|+.|..+-...... ........ .........-+...+|+|++++.++...
T Consensus 222 ~el----~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~r~~~peevA~~v~~L~s~~-- 290 (319)
T 2ptg_A 222 FEA----GRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAID-----YSEANAPLQKELESDDVGRAALFLLSPL-- 290 (319)
T ss_dssp HHH----HHHHCCEEEEEEECCCC------------------------------------CCCHHHHHHHHHHHTSGG--
T ss_pred HHh----ccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHH-----HHhccCCCCCCCCHHHHHHHHHHHhCcc--
Confidence 210 1 147999999999987653211000 00000000 0000001123568899999999887521
Q ss_pred CCCCCCCCCCCCCceEEEeCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.....|+.+.+.+|..
T Consensus 291 -------~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 291 -------ARAVTGATLYVDNGLH 306 (319)
T ss_dssp -------GTTCCSCEEEESTTCT
T ss_pred -------cCCccCCEEEECCCce
Confidence 3346788888877753
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00078 Score=67.63 Aligned_cols=113 Identities=13% Similarity=0.068 Sum_probs=82.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+.++++|+.|+.++.+++...+.++||++||...++|.. ....|+.+|...+.+..+..
T Consensus 342 e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~----------------g~~~YaAaKa~ldala~~~~-- 403 (496)
T 3mje_A 342 GQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG----------------GQPGYAAANAYLDALAEHRR-- 403 (496)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT----------------TCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC----------------CcHHHHHHHHHHHHHHHHHH--
Confidence 345778999999999999999999999999999988765531 14789999999999988764
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..|++++++.|+.+.+++.... ......+.... ...+..++.++++..++.
T Consensus 404 ------~~Gi~v~sV~pG~w~~~gm~~~-~~~~~~l~~~g-----------~~~l~pe~~~~~l~~~l~ 454 (496)
T 3mje_A 404 ------SLGLTASSVAWGTWGEVGMATD-PEVHDRLVRQG-----------VLAMEPEHALGALDQMLE 454 (496)
T ss_dssp ------HTTCCCEEEEECEESSSCC-------CHHHHHTT-----------EEEECHHHHHHHHHHHHH
T ss_pred ------hcCCeEEEEECCcccCCccccC-hHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHc
Confidence 2689999999999877654311 11111121111 234678999999998886
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0021 Score=60.41 Aligned_cols=138 Identities=9% Similarity=-0.003 Sum_probs=87.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.|+.++++++...- -.++|++||..+..+ .+. ....|+.||+..+.+.+.+.
T Consensus 144 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------~~~-----~~~~Y~asKaal~~l~~~la 208 (315)
T 2o2s_A 144 KGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERV----------VPG-----YGGGMSSAKAALESDTRTLA 208 (315)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSC----------CTT-----CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEeccccccc----------CCC-----ccHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999997641 158999999874211 110 01479999999998887764
Q ss_pred CCCCCCCC-CCCceEEEEecCceecCCC--------CCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNN-RKCLYTCAVRPAAIYGPGE--------ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~-~~gl~~~ilRp~~IyGp~~--------~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... . ..|+++.+++|+.|..+-. ......+...+....+ ..-+...+|+|++++.++.
T Consensus 209 ~el----~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedvA~~v~~L~s 275 (315)
T 2o2s_A 209 WEA----GQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAP---------LRRDLHSDDVGGAALFLLS 275 (315)
T ss_dssp HHH----HHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSS---------SCCCCCHHHHHHHHHHHTS
T ss_pred HHh----CcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCC---------CCCCCCHHHHHHHHHHHhC
Confidence 210 1 1589999999998864310 0001111111111111 0124678999999998875
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.. .....|+.+.+.+|.
T Consensus 276 ~~---------~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 276 PL---------ARAVSGVTLYVDNGL 292 (315)
T ss_dssp GG---------GTTCCSCEEEESTTG
T ss_pred ch---------hccCcCCEEEECCCe
Confidence 11 334578888887774
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0021 Score=58.21 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=89.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++++++++|+.|+-.+.+++... +-.++|.+||.....+ .| ....|+.||+..+.+.+..
T Consensus 98 ~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~----------~~------~~~~Y~asKaav~~ltr~l 161 (242)
T 4b79_A 98 ATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG----------SA------DRPAYSASKGAIVQLTRSL 161 (242)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC----------CS------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC----------CC------CCHHHHHHHHHHHHHHHHH
Confidence 467889999999999988887542 1258999999875221 11 1468999999999887765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
.... .+.|+++..+-|+.|--|-... .-+...+.+.+.-+.-. +-..+|++.+++.++..
T Consensus 162 A~El----a~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd----- 223 (242)
T 4b79_A 162 ACEY----AAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR---------WGEAPEVASAAAFLCGP----- 223 (242)
T ss_dssp HHHH----GGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHTSG-----
T ss_pred HHHh----hhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCc-----
Confidence 4211 2368999999999987653221 11233444444333222 45579999999887641
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 224 ----~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 224 ----GASFVTGAVLAVDGG 238 (242)
T ss_dssp ----GGTTCCSCEEEESTT
T ss_pred ----hhcCccCceEEECcc
Confidence 134567898887665
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.002 Score=59.45 Aligned_cols=137 Identities=12% Similarity=0.131 Sum_probs=90.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+++.++++|+.|+-++.+++... .-.++|.+||.....+ .| ....|+.||+..+.+.+...
T Consensus 125 e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~----------~~------~~~~Y~asKaav~~ltr~lA 188 (273)
T 4fgs_A 125 EQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG----------TP------AFSVYAASKAALRSFARNWI 188 (273)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC----------CT------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC----------CC------CchHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999765 2247999999775211 11 14689999999998888764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCC-------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERH-------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
... .+.|+++.++-|+.|--|.-... -..+.+.+...-+.-. +-..+|+|.+++.++..
T Consensus 189 ~El----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~FLaSd- 254 (273)
T 4fgs_A 189 LDL----KDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR---------VGRAEEVAAAALFLASD- 254 (273)
T ss_dssp HHT----TTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------CBCHHHHHHHHHHHHSG-
T ss_pred HHh----cccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCc-
Confidence 321 34789999999998865532211 1123333333322222 44579999999888741
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|.
T Consensus 255 --------~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 255 --------DSSFVTGAELFVDGGS 270 (273)
T ss_dssp --------GGTTCCSCEEEESTTT
T ss_pred --------hhcCccCCeEeECcCh
Confidence 1345679998887764
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0005 Score=70.96 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=84.2
Q ss_pred CcchhhhHhhhhHHHHHHHHH----HHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEAC----LEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa----~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++.+++ ++.+..|+|++||..+.++.. ....|+.||+..+.+.+.
T Consensus 124 ~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~----------------~~~~Y~asKaal~~lt~~ 187 (613)
T 3oml_A 124 QDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF----------------GQVNYTAAKMGLIGLANT 187 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT----------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----------------CChHHHHHHHHHHHHHHH
Confidence 456788999999999999999 455667999999987655421 146899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
+.... ...|+.+.++.|+.+-.. . .+.. +......+..+|++.+++.++..
T Consensus 188 la~e~----~~~gI~vn~v~Pg~~t~~-~------------~~~~------~~~~~~~~~pedvA~~v~~L~s~------ 238 (613)
T 3oml_A 188 VAIEG----ARNNVLCNVIVPTAASRM-T------------EGIL------PDILFNELKPKLIAPVVAYLCHE------ 238 (613)
T ss_dssp HHHHH----GGGTEEEEEEEEC-------------------CCCC------CHHHHTTCCGGGTHHHHHHTTST------
T ss_pred HHHHh----CccCeEEEEEECCCCChh-h------------hhcc------chhhhhcCCHHHHHHHHHHhcCC------
Confidence 64211 235899999999754110 0 0100 01123345789999999887651
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
.....|+.+++.+|
T Consensus 239 ----~~~~tG~~i~vdGG 252 (613)
T 3oml_A 239 ----SCEDNGSYIESAAG 252 (613)
T ss_dssp ----TCCCCSCEEEEETT
T ss_pred ----CcCCCceEEEECCC
Confidence 23356888887765
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00063 Score=62.42 Aligned_cols=136 Identities=9% Similarity=-0.074 Sum_probs=86.6
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++++++...- -.++|++||... ++ ... ...|+.||+..+.+.+.+..
T Consensus 115 ~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~------------~~~----~~~Y~asKaa~~~l~~~la~ 177 (269)
T 2h7i_A 115 DVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RA------------MPA----YNWMTVAKSALESVNRFVAR 177 (269)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SC------------CTT----THHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cc------------cCc----hHHHHHHHHHHHHHHHHHHH
Confidence 456778999999999999997642 248999998652 21 111 46899999999988877642
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC-----HH-------HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH-----LP-------RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~-----~~-------~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
.. ...|+++.+++|+.|..+..... -. ..........+. + +.+...+|+|++++.+
T Consensus 178 e~----~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~-----rr~~~p~dvA~~v~~L 245 (269)
T 2h7i_A 178 EA----GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI---G-----WNMKDATPVAKTVCAL 245 (269)
T ss_dssp HH----HTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT---C-----CCTTCCHHHHHHHHHH
T ss_pred Hh----cccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc---c-----cCCCCHHHHHHHHHHH
Confidence 10 12589999999998864310000 00 011111111100 0 1256789999999988
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+.. ......|+.+.+.+|.
T Consensus 246 ~s~---------~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 246 LSD---------WLPATTGDIIYADGGA 264 (269)
T ss_dssp HSS---------SCTTCCSEEEEESTTG
T ss_pred hCc---------hhccCcceEEEecCCe
Confidence 851 1345678888887764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0027 Score=64.26 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=80.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+.++++|+.|+.++.+++.... ..+||++||..+++|.. ....|+.+|+..+.+..
T Consensus 364 ~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~----------------g~~~YaaaKa~l~~lA~ 427 (525)
T 3qp9_A 364 DALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGA----------------GQGAYAAGTAFLDALAG 427 (525)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCT----------------TCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCC----------------CCHHHHHHHHHHHHHHH
Confidence 3567789999999999999999876 78999999988755421 14789999999998865
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
+.. ..|+++++|.|+.+ +.+-... ......+.... ...+..++.++++..++.
T Consensus 428 ~~~--------~~gi~v~sI~pG~~-~tgm~~~-~~~~~~~~~~g-----------~~~l~pee~a~~l~~~l~ 480 (525)
T 3qp9_A 428 QHR--------ADGPTVTSVAWSPW-EGSRVTE-GATGERLRRLG-----------LRPLAPATALTALDTALG 480 (525)
T ss_dssp SCC--------SSCCEEEEEEECCB-TTSGGGS-SHHHHHHHHTT-----------BCCBCHHHHHHHHHHHHH
T ss_pred HHH--------hCCCCEEEEECCcc-ccccccc-hhhHHHHHhcC-----------CCCCCHHHHHHHHHHHHh
Confidence 543 36899999999988 3221100 11111121111 235779999999999987
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0026 Score=58.36 Aligned_cols=138 Identities=14% Similarity=0.121 Sum_probs=87.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|.+||.....+ .| .....|+.||+..+.+.+.
T Consensus 102 e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----------~~-----~~~~~Y~asKaal~~lt~~ 166 (261)
T 4h15_A 102 DDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----------LP-----ESTTAYAAAKAALSTYSKA 166 (261)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT-----TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----------CC-----CccHHHHHHHHHHHHHHHH
Confidence 35678899999999888887753 45668999999875221 11 1146899999999988776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH--------------HHHHHHHHcCCCcceecCCCccccceeHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--------------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVL 148 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--------------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~ 148 (389)
..... ...|+++.++-|+.|--|...... ..........-+. .-+...+|+|+
T Consensus 167 lA~El----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~g~peevA~ 233 (261)
T 4h15_A 167 MSKEV----SPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL---------GRPAKPEEVAN 233 (261)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT---------SSCBCHHHHHH
T ss_pred HHHHh----hhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC---------CCCcCHHHHHH
Confidence 54211 236899999999988532111000 0111111111111 12567899999
Q ss_pred HHHHHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 149 ALILASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 149 a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+++.++.. ...-..|+.+.+.+|-
T Consensus 234 ~v~fLaS~---------~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 234 LIAFLASD---------RAASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHHHSG---------GGTTCCSCEEEESTTC
T ss_pred HHHHHhCc---------hhcCccCcEEEECCcC
Confidence 99887741 1345679998887764
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0063 Score=55.53 Aligned_cols=137 Identities=12% Similarity=0.040 Sum_probs=89.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+-++.+++.. .+-.++|.+||.....+ .| ....|+.||+....+.+.
T Consensus 107 e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~----------~~------~~~~Y~asKaal~~ltr~ 170 (254)
T 4fn4_A 107 ELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG----------GF------AGAPYTVAKHGLIGLTRS 170 (254)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS----------SS------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC----------CC------CChHHHHHHHHHHHHHHH
Confidence 45778999999999888888754 45568999999875221 11 146899999999888776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC---CHHHHHHHHHc-CCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER---HLPRIVSLAKL-GLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~---~~~~li~~~~~-g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
..... .+.|+++..+-|+.|--|-... .-....+.... ..+.- -+-..+|+|.+++.++..
T Consensus 171 lA~el----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~---------R~g~pediA~~v~fLaSd-- 235 (254)
T 4fn4_A 171 IAAHY----GDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS---------RLAEPEDIANVIVFLASD-- 235 (254)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC---------CCBCHHHHHHHHHHHHSG--
T ss_pred HHHHh----hhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC---------CCcCHHHHHHHHHHHhCc--
Confidence 64211 2368999999999986552211 11111111111 11111 134589999999888741
Q ss_pred CCCCCCCCCCCCCCceEEEeCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 236 -------~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 236 -------EASFVNGDAVVVDGGL 251 (254)
T ss_dssp -------GGTTCCSCEEEESTTG
T ss_pred -------hhcCCcCCEEEeCCCc
Confidence 1345679998887764
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0026 Score=58.09 Aligned_cols=136 Identities=16% Similarity=0.161 Sum_probs=88.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+.++++|+.|+-.+.+++.. .+-.++|.+||.....+ .| ....|+.||+..+.+.+
T Consensus 108 e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~----------~~------~~~~Y~asKaal~~ltr 171 (255)
T 4g81_D 108 ENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA----------RP------TVAPYTAAKGGIKMLTC 171 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB----------CT------TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC----------CC------CchhHHHHHHHHHHHHH
Confidence 46788999999999999888743 24468999999875211 11 14689999999998877
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... .+.|+++..+-|+.|.-|..... -+...+.+....+.-. +...+|++.+++.++..
T Consensus 172 ~lA~el----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~pediA~~v~fL~S~--- 235 (255)
T 4g81_D 172 SMAAEW----AQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR---------WGRPEELIGTAIFLSSK--- 235 (255)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS---------CBCGGGGHHHHHHHHSG---
T ss_pred HHHHHh----cccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhCc---
Confidence 664211 23689999999999865422110 0122333333322222 34568999998877641
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 236 ------~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 236 ------ASDYINGQIIYVDGG 250 (255)
T ss_dssp ------GGTTCCSCEEEESTT
T ss_pred ------hhCCCcCCEEEECCC
Confidence 144567999887666
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0043 Score=56.33 Aligned_cols=136 Identities=18% Similarity=0.134 Sum_probs=88.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.++++++++|+.|+-.+.+++.. .+ -.++|.+||.....| .| ....|+.||+....+.+
T Consensus 101 ~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g----------~~------~~~~Y~asKaav~~ltr 164 (247)
T 4hp8_A 101 LDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG----------GI------RVPSYTAAKHGVAGLTK 164 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------CS------SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC----------CC------CChHHHHHHHHHHHHHH
Confidence 46788999999999999987653 33 458999999875211 11 14689999999998877
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... .+.|+++..+-|+.|--|..... -+...+.+....+.-. +-..+|++.+++.++..
T Consensus 165 ~lA~El----a~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeiA~~v~fLaSd--- 228 (247)
T 4hp8_A 165 LLANEW----AAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR---------WGHSEDIAGAAVFLSSA--- 228 (247)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS---------CBCTHHHHHHHHHHTSG---
T ss_pred HHHHHH----hhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC---------CcCHHHHHHHHHHHhCc---
Confidence 654211 23689999999998854422110 0122223333332222 34578999999887641
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 229 ------~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 229 ------AADYVHGAILNVDGG 243 (247)
T ss_dssp ------GGTTCCSCEEEESTT
T ss_pred ------hhcCCcCCeEEECcc
Confidence 134567898887666
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0073 Score=54.94 Aligned_cols=134 Identities=11% Similarity=-0.007 Sum_probs=89.2
Q ss_pred chhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.....++|+.++..+.+++...- -.++|.+||....++ .| ....|+.||+..+.+.+.....
T Consensus 114 ~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~----------~~------~~~~Y~asKaal~~ltr~lA~E 177 (256)
T 4fs3_A 114 FLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA----------VQ------NYNVMGVAKASLEANVKYLALD 177 (256)
T ss_dssp HHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC----------CT------TTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC----------cc------cchhhHHHHHHHHHHHHHHHHH
Confidence 34567889999998888887642 248999999875221 11 1478999999998887765421
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
. .+.|+++.++-|+.|--+... ...+...+.+...-+.-. +...+|++.+++.++..
T Consensus 178 l----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R---------~g~peevA~~v~fL~Sd-------- 236 (256)
T 4fs3_A 178 L----GPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR---------NVDQVEVGKTAAYLLSD-------- 236 (256)
T ss_dssp H----GGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS---------CCCHHHHHHHHHHHHSG--------
T ss_pred h----CccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhCc--------
Confidence 1 236899999999988655332 223455555544433222 34588999999887741
Q ss_pred CCCCCCCCceEEEeCC
Q 016468 165 KGRPIASGQPYFVSDG 180 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 237 -~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 237 -LSSGVTGENIHVDSG 251 (256)
T ss_dssp -GGTTCCSCEEEESTT
T ss_pred -hhcCccCCEEEECcC
Confidence 134467999888766
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0029 Score=59.84 Aligned_cols=82 Identities=5% Similarity=-0.066 Sum_probs=59.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCC-cHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVD-SYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~-~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.|+.++.+++...-. .++|++||.....+ .| . .. .|+.||+..+.+.+..
T Consensus 137 ~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~----------~~--~----~~~~Y~asKaal~~~~~~l 200 (329)
T 3lt0_A 137 KGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKV----------VP--G----YGGGMSSAKAALESDTRVL 200 (329)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC----------CT--T----CTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCC----------CC--c----chHHHHHHHHHHHHHHHHH
Confidence 35677899999999999999976522 48999999774211 11 1 33 8999999999888765
Q ss_pred CCCCCCCCCC-CCceEEEEecCceec
Q 016468 84 NGRPFKKNNR-KCLYTCAVRPAAIYG 108 (389)
Q Consensus 84 ~~~~~~~~~~-~gl~~~ilRp~~IyG 108 (389)
.... .. .|+++.++.|+.|--
T Consensus 201 a~el----~~~~gI~vn~v~PG~v~T 222 (329)
T 3lt0_A 201 AYHL----GRNYNIRINTISAGPLKS 222 (329)
T ss_dssp HHHH----HHHHCCEEEEEEECCCCC
T ss_pred HHHh----CCccCeEEEEEecceeec
Confidence 4211 12 479999999998854
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.008 Score=54.93 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=89.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.++.++.+++... +-.++|.+||.....+. | ....|+.||+..+.+.+..
T Consensus 104 e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~----------~------~~~~Y~asKaav~~ltr~l 167 (258)
T 4gkb_A 104 DAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ----------G------NTSGYCASKGAQLALTREW 167 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC----------S------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC----------C------CchHHHHHHHHHHHHHHHH
Confidence 457788999999999998888542 22589999998753221 1 1468999999999888766
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCH------HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL------PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~------~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.... .+.|+++.++-|+.|--|-..... ......+....+. | .-+...+|+|.+++.++..
T Consensus 168 A~el----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---g-----~R~g~peeiA~~v~fLaS~- 234 (258)
T 4gkb_A 168 AVAL----REHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL---G-----RRFTTPDEIADTAVFLLSP- 234 (258)
T ss_dssp HHHH----GGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT---T-----TSCBCHHHHHHHHHHHHSG-
T ss_pred HHHh----cccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC---C-----CCCcCHHHHHHHHHHHhCc-
Confidence 4211 236899999999998655332111 1112222222111 0 1245689999998887741
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 235 --------~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 235 --------RASHTTGEWLFVDGGY 250 (258)
T ss_dssp --------GGTTCCSCEEEESTTT
T ss_pred --------hhcCccCCeEEECCCc
Confidence 1445689999887764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=94.64 E-value=0.19 Score=51.59 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=94.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++.+++.. .+-.++|.+||....++. + ....|+.||+..+.+.+.
T Consensus 417 ~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~----------~------~~~~Y~asKaal~~lt~~ 480 (604)
T 2et6_A 417 QEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN----------F------GQANYSSSKAGILGLSKT 480 (604)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC----------T------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC----------C------CChhHHHHHHHHHHHHHH
Confidence 45678999999999999888854 344689999998753321 1 146899999999887776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..... ...|+++.++-|+ + ++........ . ...+....+|++.++..++..
T Consensus 481 la~El----~~~gIrVn~v~PG-~----~T~m~~~~~~-----~---------~~~~~~~pe~vA~~v~~L~s~------ 531 (604)
T 2et6_A 481 MAIEG----AKNNIKVNIVAPH-A----ETAMTLSIMR-----E---------QDKNLYHADQVAPLLVYLGTD------ 531 (604)
T ss_dssp HHHHH----GGGTEEEEEEEEC-C----CCCC-----------------------CCSSCGGGTHHHHHHTTST------
T ss_pred HHHHh----CccCeEEEEEcCC-C----CCccccccCc-----h---------hhccCCCHHHHHHHHHHHhCC------
Confidence 54211 2368999999997 2 1211111100 0 011235688999988877641
Q ss_pred CCCCCCCCCCceEEEeCC-----------------CCCChHHHHHHHHHhCCCCC
Q 016468 163 GQKGRPIASGQPYFVSDG-----------------FPINTFEFIGPLLKTLDYDL 200 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~-----------------~~~s~~e~~~~l~~~lg~~~ 200 (389)
... ..|+.+.+.+| ...+..++.+...+......
T Consensus 532 ---~~~-itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 582 (604)
T 2et6_A 532 ---DVP-VTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFTT 582 (604)
T ss_dssp ---TCC-CCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCSS
T ss_pred ---ccC-CCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcccc
Confidence 133 67888887765 23577778777777776553
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=93.09 E-value=0.2 Score=51.41 Aligned_cols=144 Identities=17% Similarity=0.183 Sum_probs=93.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+-++.+++.. .+-.++|.+||....++. + ....|+.||+..+.+.+.
T Consensus 113 ~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~----------~------~~~~Y~asKaal~~lt~~ 176 (604)
T 2et6_A 113 KDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN----------F------GQANYASAKSALLGFAET 176 (604)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----------C------CchHHHHHHHHHHHHHHH
Confidence 45678999999999999888753 345699999998754431 1 136899999999988776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.... ....|+++.++-|+ + .+ .+... ... .........+|++.++..++..
T Consensus 177 la~E----l~~~gIrVn~v~Pg-~----~T----~m~~~---~~~-------~~~~~~~~pe~vA~~v~~L~s~------ 227 (604)
T 2et6_A 177 LAKE----GAKYNIKANAIAPL-A----RS----RMTES---IMP-------PPMLEKLGPEKVAPLVLYLSSA------ 227 (604)
T ss_dssp HHHH----HGGGTEEEEEEEEC-C----CC----HHHHT---TSC-------HHHHTTCSHHHHHHHHHHHTSS------
T ss_pred HHHH----hCccCeEEEEEccC-C----cC----ccccc---cCC-------hhhhccCCHHHHHHHHHHHhCC------
Confidence 5421 12368999999995 2 11 11110 000 0111235789999999888751
Q ss_pred CCCCCCCCCCceEEEeCC------------------CCCChHHHHHHHHHhCCCC
Q 016468 163 GQKGRPIASGQPYFVSDG------------------FPINTFEFIGPLLKTLDYD 199 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~------------------~~~s~~e~~~~l~~~lg~~ 199 (389)
.....|+.+.+.+| ...+..++.+.+.+.....
T Consensus 228 ----~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 278 (604)
T 2et6_A 228 ----ENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILDYD 278 (604)
T ss_dssp ----SCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTCCC
T ss_pred ----cccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhchh
Confidence 23346788777654 3356677877776665433
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=93.02 E-value=0.27 Score=56.16 Aligned_cols=143 Identities=17% Similarity=0.135 Sum_probs=85.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+.+.++++|+.|+.+++++++.. +-.++|++||...++|+ ...|+.||+..+.+..
T Consensus 765 ~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg------------------~~aYaASKAAL~aLt~ 826 (1878)
T 2uv9_A 765 LAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN------------------DGLYSESKLALETLFN 826 (1878)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC------------------CSSHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC------------------chHHHHHHHHHHHHHH
Confidence 45788999999999999885322 22589999998754320 3689999999998866
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
......+ . .+++++++.|+.|-|.+-... ............ .-....+|++.+++.++...
T Consensus 827 ~laAeEl---a-~~IrVNaVaPG~V~gT~m~~~-~~~~~~~~~~~p----------lr~~sPeEVA~avlfLaSd~---- 887 (1878)
T 2uv9_A 827 RWYSESW---G-NYLTICGAVIGWTRGTGLMSA-NNLVAEGVEKLG----------VRTFSQQEMAFNLLGLMAPA---- 887 (1878)
T ss_dssp HHHHSTT---T-TTEEEEEEEECCBCCTTSCSH-HHHTHHHHHTTT----------CCCBCHHHHHHHHHHHHSHH----
T ss_pred HHHHHHc---C-CCeEEEEEEecceecCccccc-chhhHHHHHhcC----------CCCCCHHHHHHHHHHHhCCc----
Confidence 4322111 1 239999999998873221111 111111111110 02347899999998877410
Q ss_pred CCCCCC-CCCCCceEEEe--CC--CCCChHHHHHHH
Q 016468 162 PGQKGR-PIASGQPYFVS--DG--FPINTFEFIGPL 192 (389)
Q Consensus 162 ~~~~~~-~~~~g~~y~i~--~~--~~~s~~e~~~~l 192 (389)
. ....|+.+.+. +| ...++.++...+
T Consensus 888 -----a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 888 -----IVNLCQSDPVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp -----HHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred -----ccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence 0 12357777763 33 224566665544
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=90.29 E-value=0.11 Score=54.97 Aligned_cols=112 Identities=15% Similarity=0.076 Sum_probs=75.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+..+++|+.|+.|+.+++.. .. +||.+||...+.|.. ....|+.+|...+.+..+..
T Consensus 633 e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~~----------------g~~~YaAaka~~~alA~~~~-- 692 (795)
T 3slk_A 633 ERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGSG----------------GQGNYAAANSFLDALAQQRQ-- 692 (795)
T ss_dssp HHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTCS----------------SCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCCC----------------CCHHHHHHHHHHHHHHHHHH--
Confidence 45678899999999999999843 34 899999988655421 14789999999988887774
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..|+++..|-|+.+-.++-..... .....+.... ...+..++..+++..++.
T Consensus 693 ------~~Gi~v~sI~pG~v~t~g~~~~~~~~~~~~~~~~g-----------~~~l~~~e~~~~~~~~l~ 745 (795)
T 3slk_A 693 ------SRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSG-----------LLPISTEEGLSQFDAACG 745 (795)
T ss_dssp ------HTTCCEEEEEECCCSCCCHHHHHHHHHHHHHHHTT-----------BCCCCHHHHHHHHHHHHT
T ss_pred ------HcCCeEEEEECCeECcchhhccccHHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHh
Confidence 268999999998875432111111 1111121111 234567788887777775
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=88.47 E-value=0.76 Score=52.68 Aligned_cols=78 Identities=19% Similarity=0.118 Sum_probs=57.5
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH-H
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL-V 80 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~-l 80 (389)
+.+.++++|+.++.+++++++... -.++|.+||....++ . ...|+.||+..+.+ .
T Consensus 790 ~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--------------g----~~aYaASKAAL~~Ltt 851 (1887)
T 2uv8_A 790 FAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--------------G----DGMYSESKLSLETLFN 851 (1887)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--------------C----BTTHHHHHHHGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--------------C----CchHHHHHHHHHHHHH
Confidence 457889999999999999985432 148999999775332 1 36899999999998 4
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceec
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYG 108 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyG 108 (389)
...... + ... ++++++.|+.|-|
T Consensus 852 r~lA~e-l---a~~-IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 852 RWHSES-W---ANQ-LTVCGAIIGWTRG 874 (1887)
T ss_dssp HHHHSS-C---TTT-EEEEEEEECCEEC
T ss_pred HHHHHH-h---CCC-eEEEEEEeccccc
Confidence 443321 1 123 9999999999985
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=85.54 E-value=0.4 Score=53.63 Aligned_cols=79 Identities=19% Similarity=0.129 Sum_probs=57.0
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+.+.++++|+.++.+++++++.. +-.++|++||..+.++ . ...|+.||+..+.+..
T Consensus 591 d~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--------------g----~saYaASKAAL~aLtt 652 (1688)
T 2pff_A 591 FAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--------------G----DGMYSESKLSLETLFN 652 (1688)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--------------C----BTTHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--------------C----chHHHHHHHHHHHHHH
Confidence 45788999999999999998432 1248999999765322 1 3689999999999854
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceec
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYG 108 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyG 108 (389)
+.....+ . ..++++++.|+.|-|
T Consensus 653 rsLAeEl---a-~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 653 RWHSESW---A-NQLTVCGAIIGWTRG 675 (1688)
T ss_dssp HTTTSSC---T-TTEECCCCCCCCCCC
T ss_pred HHHHHHc---C-CCeEEEEEEECcCcC
Confidence 4332211 1 238999999999985
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=80.13 E-value=1.9 Score=41.70 Aligned_cols=83 Identities=14% Similarity=0.032 Sum_probs=55.2
Q ss_pred cchhhhHhhhhHHH-HHHHHHHHcCC----CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTC-HVIEACLEFGI----QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~-nll~aa~~~gv----krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+.+.+.++|..++- .+++++...+. .++|.+||.....+ .|.. ....|+.||...+.+.+.
T Consensus 194 e~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~----------~p~~----~~~aY~AaKaal~~ltrs 259 (405)
T 3zu3_A 194 EIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT----------HDIY----WNGSIGAAKKDLDQKVLA 259 (405)
T ss_dssp HHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG----------TTTT----TTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc----------CCCc----cchHHHHHHHHHHHHHHH
Confidence 45667788888775 66666654322 47999999774211 1110 127899999999988877
Q ss_pred hCCCCCCCCCCC-CceEEEEecCceec
Q 016468 83 SNGRPFKKNNRK-CLYTCAVRPAAIYG 108 (389)
Q Consensus 83 ~~~~~~~~~~~~-gl~~~ilRp~~IyG 108 (389)
.+... ... |+++.++-|+.|--
T Consensus 260 LA~El----a~~~GIRVNaVaPG~i~T 282 (405)
T 3zu3_A 260 IRESL----AAHGGGDARVSVLKAVVS 282 (405)
T ss_dssp HHHHH----HTTTSCEEEEEECCCCCC
T ss_pred HHHHh----CcccCeEEEEEEeCCCcC
Confidence 64311 235 89999999988754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 389 | ||||
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-19 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-17 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 4e-16 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-16 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-10 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 2e-09 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 6e-08 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 6e-07 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 7e-07 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-05 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 6e-04 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 85.6 bits (211), Expect = 4e-19
Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 38/282 (13%)
Query: 14 EVNINGTCHVIEACLEFGIQ---RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
+V+ GT ++EA G++ R ST + ++G + + E+ P++P Y
Sbjct: 103 DVDAMGTLRLLEAIRFLGLEKKTRFYQAST-SELYGLVQEIPQKETTPFYPRS----PYA 157
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP-----GEERHLPRIVSLAKLG 125
+K A + + +Y C P R + R ++ G
Sbjct: 158 VAKLYAYWITVNYR-------ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQG 210
Query: 126 L-VPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184
L +G DW + + V + + + ++ G +
Sbjct: 211 LESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-------------EQPEDFVIATGVQYS 257
Query: 185 TFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244
+F+ L L V + V + P + PAEV
Sbjct: 258 VRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVE 317
Query: 245 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286
T KA ++L + P ++ RE ++ ++ + +K
Sbjct: 318 ----TLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK 355
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 81.0 bits (199), Expect = 1e-17
Identities = 53/273 (19%), Positives = 96/273 (35%), Gaps = 60/273 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
E N+ GT +++ ++ G+ R+V+VS N V+G + + ES P P Y SK
Sbjct: 101 ETNVQGTQTLLQCAVDAGVGRVVHVS-TNQVYGSIDSGSWTESSPLEPNS----PYAASK 155
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKLGLVPFKI 131
+ ++ + + L R YGP + E+ +P V+ G
Sbjct: 156 AGSDLVARAYH-------RTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLY 208
Query: 132 GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGP 191
G+ + +W++ D+ + L GR G+ Y + G + E G
Sbjct: 209 GDGANVREWVHTDDHCRGIALV---------LAGGRA---GEIYHIGGGLELTNRELTGI 256
Query: 192 LLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHY 251
LL +L D + +
Sbjct: 257 LLDSLGADWSSVRKVADR------------------------------KGHDLR----YS 282
Query: 252 FSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284
K + EL Y P VS +G+A T+ ++++ +
Sbjct: 283 LDGGKIERELGYRPQVSFADGLARTVRWYRENR 315
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.2 bits (187), Expect = 4e-16
Identities = 42/275 (15%), Positives = 74/275 (26%), Gaps = 60/275 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ N GT +++ G RL+ ST V + + + Y K
Sbjct: 90 KTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGK 148
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPG----EERHLPRIVSLAKLGLVPF 129
VAE + ++ + R +GP + R + + A G
Sbjct: 149 RVAETMCYAYM-------KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT 201
Query: 130 KIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFI 189
G S + YV +LV L+ P + + EF
Sbjct: 202 VYGSGSQTRAFQYVSDLVNGLVALMN-------------SNVSSPVNLGNPEEHTILEFA 248
Query: 190 GPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVT 249
+ + +L+ + K
Sbjct: 249 QLIKNLVGSGSEIQFLSEA-------------------------------QDDPQKR--- 274
Query: 250 HYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284
+ KAK L + P+V EG+ I Y++
Sbjct: 275 -KPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 308
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 76.3 bits (187), Expect = 5e-16
Identities = 48/289 (16%), Positives = 91/289 (31%), Gaps = 66/289 (22%)
Query: 14 EVNINGTCHVIEACLEFGIQ---------RLVYVSTYNVVFGGKEIVNGNESLPYFPIDE 64
E NI GT ++E ++ R ++ST + V+G + E+ P+
Sbjct: 98 ETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFT 156
Query: 65 H------VDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE--ERHLP 116
Y SK+ ++ LV ++ R + L T + YGP E+ +P
Sbjct: 157 ETTAYAPSSPYSASKASSDHLV-RAWRRTYG------LPTIVTNCSNNYGPYHFPEKLIP 209
Query: 117 RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYF 176
++ A G G+ DW+YV++ AL + +G+ G+ Y
Sbjct: 210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVV---------TEGKA---GETYN 257
Query: 177 VSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236
+ + V +L + + +
Sbjct: 258 IGGHNEKKNLD----------------------------VVFTICDLLDEIVPKATSYRE 289
Query: 237 LILPAEVYKVGVTHYF-SLLKAKDELCYVPIVSPREGMAATISYWQDRK 284
I Y K EL + P+ + G+ T+ ++
Sbjct: 290 QITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANT 338
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (142), Expect = 2e-10
Identities = 45/282 (15%), Positives = 90/282 (31%), Gaps = 48/282 (17%)
Query: 14 EVNINGTCHVIEACLEFGIQ---RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYG 70
+V+ GT +++A G+ + ST + ++G + + E+ P++P YG
Sbjct: 104 DVDGVGTLRLLDAVKTCGLINSVKFYQAST-SELYGKVQEIPQKETTPFYPR----SPYG 158
Query: 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP-----GEERHLPRIVSLAKLG 125
+K A +V+ L+ P R + R V+ LG
Sbjct: 159 AAKLYAYWIVVNF-------REAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLG 211
Query: 126 LVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184
+ G K DW + + V A+ L + IA+G+ + V + +
Sbjct: 212 QLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ-----NDEPEDFVIATGEVHSVREFVEKS 266
Query: 185 TFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244
++ + + + ++ P EV
Sbjct: 267 FLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYR------------------PTEVD 308
Query: 245 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKRK 286
+ KAK +L + P V+ E + + + R
Sbjct: 309 FL----QGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRT 346
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 56.0 bits (134), Expect = 2e-09
Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 9/105 (8%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDS-YGRS 72
N+ ++I A + + +L+++ + + ++ ES E + Y +
Sbjct: 80 YQNMMIESNIIHAAHQNDVNKLLFLGS-SCIYPKLAKQPMAESELLQGTLEPTNEPYAIA 138
Query: 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPR 117
K +L +S R + +V P +YGP + H
Sbjct: 139 KIAGIKLC-ESYNRQYG------RDYRSVMPTNLYGPHDNFHPSN 176
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 51.5 bits (122), Expect = 6e-08
Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 17/146 (11%)
Query: 16 NINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSV 75
+ G H++EA +F + Y ++ + +FG + +E+ P++ YG +K
Sbjct: 99 DGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFY----PRSPYGVAKLY 154
Query: 76 AEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGP-----GEERHLPRIVSLAKLGL-VPF 129
+ + L+ + P R + V+ KLG
Sbjct: 155 GHWITVN-------YRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQEL 207
Query: 130 KIGEPSVKTDWIYVDNLVLALILASM 155
++G K DW + + V A+ L
Sbjct: 208 RLGNVDAKRDWGFAGDYVEAMWLMLQ 233
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 48.8 bits (115), Expect = 6e-07
Identities = 45/294 (15%), Positives = 87/294 (29%), Gaps = 68/294 (23%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPID--EHVDSYGR 71
N + ++IEA GI+R Y S+ + K++ N SL E D++G
Sbjct: 105 YNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGL 164
Query: 72 SKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKI 131
K E+L N + R IYGP R + A
Sbjct: 165 EKLATEELCKHY-------NKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTS 217
Query: 132 -------GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184
G+ + ++D V ++ + +P + ++
Sbjct: 218 TDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS-------------DFREPVNIGSDEMVS 264
Query: 185 TFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244
E +L + LP + P
Sbjct: 265 MNEMAEMVLSFEEKKLPIHHIPGPE----------------------------------- 289
Query: 245 KVGVTH-YFSLLKAKDELCYVPIVSPREGMAATISYWQDR-KRKSLDGPTIYAW 296
GV K++L + P + +EG+ T + +++ +++ G + +
Sbjct: 290 --GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLY 341
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 48.4 bits (114), Expect = 7e-07
Identities = 42/275 (15%), Positives = 84/275 (30%), Gaps = 58/275 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
NI+G +++ A + +Q Y ++ + +G + E P+ Y +K
Sbjct: 116 ATNIDGFLNMLIAARDAKVQSFTYAASSS-TYGDHPGLPKVEDTIGKPL----SPYAVTK 170
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH------LPRIVSLAKLGLV 127
V E + T +R ++G ++ + +P+ S G
Sbjct: 171 YVNELYADVF-------SRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDD 223
Query: 128 PFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 187
+ G+ D+ Y++N V A +LA+ A Q Y ++ G + +
Sbjct: 224 VYINGDGETSRDFCYIENTVQANLLAA----------TAGLDARNQVYNIAVGGRTSLNQ 273
Query: 188 FIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVG 247
L L + Y + + +V
Sbjct: 274 LFFALRDGLAENGVS------------------YHREPVYRDFR--------EGDVRHS- 306
Query: 248 VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282
+ KA L Y P G+A + ++
Sbjct: 307 ---LADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 42.7 bits (99), Expect = 4e-05
Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGG---KEIVNGNESLPYFPIDEH-----V 66
N GT ++EA ++ I+ + + + V+G +E + G+ P
Sbjct: 99 TNFIGTYTLLEAARKYDIRF--HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS 156
Query: 67 DSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE--ERHLPRIVSLAKL 124
Y +K+ ++ +V K+ R F + + YGP + E+ +PR ++
Sbjct: 157 SPYSSTKAASDLIV-KAWVRSFG------VKATISNCSNNYGPYQHIEKFIPRQITNILA 209
Query: 125 GLVPFKIGEPSVKTDWIYVDNLVLALILASM 155
G+ P GE DWI+ ++ +
Sbjct: 210 GIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.4 bits (93), Expect = 2e-04
Identities = 38/277 (13%), Positives = 77/277 (27%), Gaps = 45/277 (16%)
Query: 15 VNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKS 74
NI GT ++E ++ + + V+ S+ V N P+ + YG +K
Sbjct: 100 NNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-NPYGHTKY 158
Query: 75 VAEQLVL---KSNGRPFKKNNRKCLYTCAVRPAAIYGPG----EERHLPRIVSLAKLGLV 127
E ++ S+ + +K + P+ + G LP + +A
Sbjct: 159 AIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRRE 218
Query: 128 PFKI-GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGR-PIASGQPYFVSDGFPINT 185
I G+ D + + + + LA + + + + + G
Sbjct: 219 KLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTV 278
Query: 186 FEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYK 245
FE K DLP +V
Sbjct: 279 FEVYHAFCKASGIDLPYKVTGRR-------------------------------AGDVLN 307
Query: 246 VGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282
+ +AK EL + + + + +
Sbjct: 308 L----TAKPDRAKRELKWQTELQVEDSCKDLWKWTTE 340
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 6e-04
Identities = 37/282 (13%), Positives = 70/282 (24%), Gaps = 61/282 (21%)
Query: 14 EVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSK 73
+ N+NGT +I A ++ ++ S+ V +I P YG+SK
Sbjct: 98 DNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQS----PYGKSK 153
Query: 74 SVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE------------ERHLPRIVSL 121
+ EQ++ +R G +P I +
Sbjct: 154 LMVEQILTDLQKAQPDW------SIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQV 207
Query: 122 AKLGLVPFKI-GEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180
A I G D V + + + LA + +K Y + G
Sbjct: 208 AVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADG---HVVAMEKLANKPGVHIYNLGAG 264
Query: 181 FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILP 240
+ + + K + +
Sbjct: 265 VGNSVLDVVNAFSKACGKPVNYHFAPRR-------------------------------E 293
Query: 241 AEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282
++ + KA EL + + E T +
Sbjct: 294 GDLPAY----WADASKADRELNWRVTRTLDEMAQDTWHWQSR 331
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 389 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.98 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.98 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.97 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.96 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.96 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.96 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.96 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.96 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.96 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.95 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.93 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.92 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.92 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.91 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.91 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.88 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.87 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.86 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.77 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.56 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.5 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.42 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.34 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.23 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.04 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.94 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.65 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.55 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.54 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.46 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.42 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.28 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.27 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.27 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.26 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.2 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.17 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.11 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.11 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.11 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.08 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.08 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.06 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.05 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.05 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.04 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.01 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.01 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 97.01 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 96.92 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.92 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 96.91 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 96.91 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 96.89 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.86 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 96.81 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 96.79 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 96.78 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.76 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 96.75 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.68 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.68 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 96.63 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.53 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.45 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.45 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.39 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.37 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 96.29 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 96.23 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.16 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 96.03 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 95.99 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 95.82 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 95.72 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 95.72 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 95.58 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 95.45 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 95.38 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 95.33 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 95.13 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 94.38 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 93.85 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 92.74 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 92.7 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 92.02 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 91.79 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 90.86 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 90.17 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 89.58 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 88.63 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2.4e-34 Score=273.77 Aligned_cols=221 Identities=23% Similarity=0.320 Sum_probs=189.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++...++|+.||.|++++|++.+++++||+||.. +||.....+.+|++|..| .+.||.||..+|+++..+.
T Consensus 94 ~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~-~yg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~-- 166 (322)
T d1r6da_ 94 AGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQ-VYGSIDSGSWTESSPLEP----NSPYAASKAGSDLVARAYH-- 166 (322)
T ss_dssp HCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGG-GGCCCSSSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHH--
T ss_pred cchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecce-eecCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHH--
Confidence 466778899999999999999999999999999998 799888888999999888 7899999999999999986
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
++.+++++++||++||||++. +.++.++..+..|+++.++|+|++.+||+|++|+|+++..+++.
T Consensus 167 -----~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~-------- 233 (322)
T d1r6da_ 167 -----RTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG-------- 233 (322)
T ss_dssp -----HHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH--------
T ss_pred -----HHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhC--------
Confidence 336899999999999999875 46789999999999888899999999999999999999999973
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (389)
+ ..|++||+++++++++.|+++.+.+.+|.+.+...... ..+.
T Consensus 234 ---~-~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~--------------------------~~~~------- 276 (322)
T d1r6da_ 234 ---G-RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA--------------------------DRKG------- 276 (322)
T ss_dssp ---C-CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC--------------------------CCTT-------
T ss_pred ---C-CCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecC--------------------------CCCC-------
Confidence 2 24789999999999999999999999997754321100 1110
Q ss_pred HhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 245 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 245 ~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
-.....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 277 -~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~~n~~ 316 (322)
T d1r6da_ 277 -HDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRG 316 (322)
T ss_dssp -CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred -CCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence 0122468999999999999999999999999999998543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=4.2e-32 Score=257.35 Aligned_cols=218 Identities=22% Similarity=0.255 Sum_probs=182.0
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCC-----CCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNES-----LPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~-----~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
..++...+++|+.||.||+++|++.++ |+||+||.. |||.....+.+|+ +|..| .+.|+.||..+|.++
T Consensus 82 ~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~-vy~~~~~~~~~e~~~~~~~~~~p----~~~Y~~sK~~~E~~~ 155 (312)
T d2b69a1 82 MYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSE-VYGDPEVHPQSEDYWGHVNPIGP----RACYDEGKRVAETMC 155 (312)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGG-GGBSCSSSSBCTTCCCBCCSSST----THHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChh-eecCCCCCCCCccccCCCCCCCC----ccHHHHHHHHHHHHH
Confidence 467888999999999999999999998 899999988 6987666565554 34444 789999999999999
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCC----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
..++. ..+++++++||++||||++. +.++.++..+..|+++.++|+|.+.++|+|++|++++++.+++
T Consensus 156 ~~~~~-------~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~- 227 (312)
T d2b69a1 156 YAYMK-------QEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMN- 227 (312)
T ss_dssp HHHHH-------HHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHT-
T ss_pred HHHHH-------HhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHh-
Confidence 98863 36899999999999999764 3478999999999998899999999999999999999998886
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQP 236 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 236 (389)
.. .++.||+++++++++.|+++.+.+.+|.+.+....+.. +.
T Consensus 228 ----------~~--~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------------------~~- 269 (312)
T d2b69a1 228 ----------SN--VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA-------------------------QD- 269 (312)
T ss_dssp ----------SS--CCSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC-------------------------TT-
T ss_pred ----------hc--cCCceEecCCcccchhhHHHHHHHHhCCCCceEECCCC-------------------------CC-
Confidence 22 35689999999999999999999999987664433221 00
Q ss_pred CCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHcc
Q 016468 237 LILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRK 284 (389)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~ 284 (389)
+ ......|++|++++|||+|.++++++|+++++||+++.
T Consensus 270 -----~----~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~ 308 (312)
T d2b69a1 270 -----D----PQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 308 (312)
T ss_dssp -----C----CCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred -----C----CCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Confidence 0 11236799999999999999999999999999998753
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.98 E-value=3.1e-32 Score=260.89 Aligned_cols=226 Identities=18% Similarity=0.159 Sum_probs=186.2
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..++...+++|+.||.||+++|.+.+++++||+||.. +||..+..+.+|++|..| .+.|+.||..+|+++..+.
T Consensus 108 ~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~- 181 (341)
T d1sb8a_ 108 INDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSS-TYGDHPGLPKVEDTIGKP----LSPYAVTKYVNELYADVFS- 181 (341)
T ss_dssp HHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG-GGTTCCCSSBCTTCCCCC----CSHHHHHHHHHHHHHHHHH-
T ss_pred ccCccchhheeehhHHHHHHHHHhcCCceEEEcccce-eeCCCCCCCccCCCCCCC----CCcchHHHHHHHHHHHHHH-
Confidence 4566778999999999999999999999999999999 799888888999999887 7999999999999999886
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
++.+++++++||++||||++. ..++.++..+..|+++.++|+|++.++|+|++|+|.++..++..
T Consensus 182 ------~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~--- 252 (341)
T d1sb8a_ 182 ------RCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA--- 252 (341)
T ss_dssp ------HHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC---
T ss_pred ------HHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc---
Confidence 336899999999999999764 24677888899999999999999999999999999999999873
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
.....+++||++.++++|+.|+++.+.+.++.+......... . .+.+
T Consensus 253 -------~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~-------------------~----~~~~--- 299 (341)
T d1sb8a_ 253 -------GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV-------------------Y----RDFR--- 299 (341)
T ss_dssp -------CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE-------------------E----ECCC---
T ss_pred -------cccccceeeeecccccchHHHHHHHHHHHhcccccccccccc-------------------c----cCCC---
Confidence 234568899999999999999999999998754321111000 0 0110
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+.+ ......|++|++++|||+|+++++++|++|++||++.
T Consensus 300 ~~~----~~~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~~ 339 (341)
T d1sb8a_ 300 EGD----VRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMF 339 (341)
T ss_dssp TTC----CSBCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CCC----cCeeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHh
Confidence 000 1122579999999999999999999999999999873
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.5e-31 Score=258.22 Aligned_cols=239 Identities=17% Similarity=0.192 Sum_probs=176.4
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCC---eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQ---RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvk---rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
...+++.++++|+.||.||+++|++.+++ ||||+||.. |||.....+.+|++|..| .++|+.||..+|++++
T Consensus 94 ~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~-vYG~~~~~~~~E~~~~~P----~~~Y~~sK~~~E~~~~ 168 (357)
T d1db3a_ 94 SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSE-LYGLVQEIPQKETTPFYP----RSPYAVAKLYAYWITV 168 (357)
T ss_dssp TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GGTTCCSSSBCTTSCCCC----CSHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchh-hhCCCCCCCcCCCCCCCC----CChHHHHHHHHHHHHH
Confidence 45678889999999999999999998764 799999988 799877778999998877 7899999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC-C----CHHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-R----HLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~----~~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.. +.+++++++||++||||+.. . .+...+..+..+.. ...+|++++.+||+|++|+|+++.++++
T Consensus 169 ~~~~-------~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~ 241 (357)
T d1db3a_ 169 NYRE-------SYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ 241 (357)
T ss_dssp HHHH-------HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTS
T ss_pred HHHH-------HhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHh
Confidence 9863 35899999999999999654 2 23344445555543 5566999999999999999999999886
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQ 235 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 235 (389)
. ..++.|||++|+++|++|+++.+.+.+|...+....+... ............
T Consensus 242 -----------~--~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--------------~~~~~~~~~~~~ 294 (357)
T d1db3a_ 242 -----------Q--EQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEE--------------KGIVVSVTGHDA 294 (357)
T ss_dssp -----------S--SSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGC--------------EEEEEEECSSSC
T ss_pred -----------C--CCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccc--------------cchhhhhhcccc
Confidence 2 2467999999999999999999999998553322111100 000000000000
Q ss_pred CCCCHH---------HHHHhc-cccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 236 PLILPA---------EVYKVG-VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 236 ~~~~~~---------~~~~~~-~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
+...+. ..+... ....+|++|++++|||+|+++++++|+++++++.+
T Consensus 295 ~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~ 351 (357)
T d1db3a_ 295 PGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLE 351 (357)
T ss_dssp TTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred cccccCceeEeeccccCCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 000000 000011 11256999999999999999999999999987554
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.96 E-value=7.2e-31 Score=253.85 Aligned_cols=227 Identities=21% Similarity=0.241 Sum_probs=178.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC---------CCeEEEecCCceecCCcccCCCC----------CCCCCCCCCCCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG---------IQRLVYVSTYNVVFGGKEIVNGN----------ESLPYFPIDEHVD 67 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g---------vkrlV~~SS~~vvyg~~~~~~~~----------E~~p~~p~~~~~~ 67 (389)
.++..++++|+.||.|++++|++.+ ++||||+||.. |||.....+.+ |+.+..| .+
T Consensus 91 ~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~~~~~~~~~~~e~~~~~p----~s 165 (361)
T d1kewa_ 91 TGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-VYGDLPHPDEVENSVTLPLFTETTAYAP----SS 165 (361)
T ss_dssp HCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGG-GGCCCCCGGGSCTTSCCCCBCTTSCCCC----CS
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccce-eeCCCccCCccccccCCCCcccCCCCCC----CC
Confidence 4678899999999999999999865 45999999998 79876543322 3334444 78
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 68 SYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 68 ~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
.||.||..+|+++..+.. ..+++++++||++||||++. +.++.++..+..|+++.++|+|++.++|+|++|
T Consensus 166 ~Yg~sK~~~E~~~~~~~~-------~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D 238 (361)
T d1kewa_ 166 PYSASKASSDHLVRAWRR-------TYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238 (361)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHH-------HhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHH
Confidence 999999999999999863 36899999999999999875 467899999999998888999999999999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccc-cCHHHHHHHHHHHHHHHHHh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVL 224 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~-~p~~~~~~~a~~~~~~~~~~ 224 (389)
+|+++..+++. . ..|++|||++++++++.|+++.+.+.++...+... .+..
T Consensus 239 ~a~ai~~~~~~-----------~-~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~---------------- 290 (361)
T d1kewa_ 239 HARALHMVVTE-----------G-KAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQ---------------- 290 (361)
T ss_dssp HHHHHHHHHHH-----------C-CTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGG----------------
T ss_pred HHHHHHHHHhc-----------C-CCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccc----------------
Confidence 99999999973 2 24779999999999999999999888764432111 0000
Q ss_pred hhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 225 YPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+ ......+. -......|++|++++|||+|+++++++|++|++||+++..
T Consensus 291 ---~-----~~~~~~~~----~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n~~ 339 (361)
T d1kewa_ 291 ---I-----TYVADRPG----HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQ 339 (361)
T ss_dssp ---E-----EEECCCTT----CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred ---e-----eecCCCCC----CCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhHH
Confidence 0 00000000 0123367999999999999999999999999999988643
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=8.9e-29 Score=238.54 Aligned_cols=217 Identities=17% Similarity=0.151 Sum_probs=175.3
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCC-------CCCCCCCCCCCCcHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNE-------SLPYFPIDEHVDSYGRSKSVAEQ 78 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E-------~~p~~p~~~~~~~Y~~SK~~aE~ 78 (389)
..++.....+|+.+|.|++++|++.+++|+||+||.. +|+.....+.+| +.|..| .+.|+.||..+|+
T Consensus 97 ~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~-~~~~~~~~~~~~~~~~~~e~~~~~p----~~~Yg~sK~~~E~ 171 (363)
T d2c5aa1 97 QSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSAC-IYPEFKQLETTNVSLKESDAWPAEP----QDAFGLEKLATEE 171 (363)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGG-GSCGGGSSSSSSCEECGGGGSSBCC----SSHHHHHHHHHHH
T ss_pred ccccccccccccchhhHHHHhHHhhCccccccccccc-cccccccccccccccccccCCcCCC----CCHHHHHHHHHHH
Confidence 4567778899999999999999999999999999998 688765544433 334444 7899999999999
Q ss_pred HHHHhCCCCCCCCCCCCceEEEEecCceecCCCCC-----C--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 79 LVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----H--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 79 ~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
+++.+.+ ..|++++++||++||||++.. . ................+|+|++.++|+|++|+++++.
T Consensus 172 ~~~~~~~-------~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~ 244 (363)
T d2c5aa1 172 LCKHYNK-------DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL 244 (363)
T ss_dssp HHHHHHH-------HHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred HHHHHHH-------HhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHH
Confidence 9998863 368999999999999997652 1 2233344455566777899999999999999999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
.+++ .+ .+++||+++++++++.|+++.+.+.+|.+.+....|.+
T Consensus 245 ~~~~-----------~~--~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~----------------------- 288 (363)
T d2c5aa1 245 RLTK-----------SD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP----------------------- 288 (363)
T ss_dssp HHHH-----------SS--CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC-----------------------
T ss_pred HHHh-----------CC--CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCC-----------------------
Confidence 9887 22 46799999999999999999999999988775544321
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
.. ......|++|++++|||+|.++++++|++|++||+++
T Consensus 289 ---~~----------~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~~ 327 (363)
T d2c5aa1 289 ---EG----------VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 327 (363)
T ss_dssp ---CC----------CSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred ---CC----------ccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 10 1123679999999999999999999999999999875
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=4.7e-29 Score=236.05 Aligned_cols=221 Identities=20% Similarity=0.223 Sum_probs=174.5
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCC-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvk-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..++..++++|+.||.|++++|++.+++ +++++||.. +||.....+.+|++|..| .+.|+.||..+|+++..+.
T Consensus 89 ~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p----~~~Y~~sK~~~E~~~~~~~ 163 (321)
T d1rpna_ 89 WNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSE-MFGLIQAERQDENTPFYP----RSPYGVAKLYGHWITVNYR 163 (321)
T ss_dssp TTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGG-GGCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchh-hcCcccCCCCCCCCCccc----cChhHHHHHHHHHHHHHHH
Confidence 3567788999999999999999999865 666677766 799888888899998887 7999999999999999886
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC-CC----HHHHHHHHHcCC-CcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE-RH----LPRIVSLAKLGL-VPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~----~~~li~~~~~g~-~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
. ..+++++++||+++|||... .. +..++..+..+. ....+|++++.++|+|++|+|++++++++
T Consensus 164 ~-------~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~--- 233 (321)
T d1rpna_ 164 E-------SFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQ--- 233 (321)
T ss_dssp H-------HHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHH---
T ss_pred h-------hcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHh---
Confidence 2 36799999999999999643 22 333444455554 44567999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCc-cccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPK-SWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~-~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
.+ .++.||++++++.++.++++.+.+.+|.+.+. ..++.. .
T Consensus 234 --------~~--~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~ 275 (321)
T d1rpna_ 234 --------QD--KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA----------------------------F 275 (321)
T ss_dssp --------SS--SCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG----------------------------G
T ss_pred --------cC--CcCCceecccccceehhhhHHHHHHhCCCccceeecCCC----------------------------C
Confidence 22 24679999999999999999999999976432 221110 0
Q ss_pred CCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 238 ILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 238 ~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
..+.+ ......|++|++++|||+|+++++++|++|++|+.++
T Consensus 276 ~rp~~----~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~l~~ 317 (321)
T d1rpna_ 276 FRPAE----VDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEADLRR 317 (321)
T ss_dssp CCSSC----CCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CCCCc----cCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence 00101 1123569999999999999999999999999998874
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.96 E-value=7.8e-29 Score=237.61 Aligned_cols=218 Identities=20% Similarity=0.250 Sum_probs=176.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcc------------cCCCCCCCCCCCCCCCCCcHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKE------------IVNGNESLPYFPIDEHVDSYGRSKS 74 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~------------~~~~~E~~p~~p~~~~~~~Y~~SK~ 74 (389)
.++..++++|+.||.|++++|.+.+. ++|++||.. +||..+ ....+|+++..| .+.||.||.
T Consensus 91 ~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~-vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p----~s~Y~~sK~ 164 (346)
T d1oc2a_ 91 NDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDE-VYGDLPLREDLPGHGEGPGEKFTAETNYNP----SSPYSSTKA 164 (346)
T ss_dssp HCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GGCCBCCGGGSTTTTCSTTSSBCTTSCCCC----CSHHHHHHH
T ss_pred hCcccceeeehHhHHhhhhhhccccc-cccccccce-EecccCccccccccccCcccccccCCCCCC----CCHHHHHHH
Confidence 56788899999999999999999996 799999988 687531 122345555555 789999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 75 VAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 75 ~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
.+|++++.+. +..+++++++||++||||++. ..+...+..+..|....++|++++.++|+|++|+|++++.
T Consensus 165 ~~E~~~~~~~-------~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~ 237 (346)
T d1oc2a_ 165 ASDLIVKAWV-------RSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWA 237 (346)
T ss_dssp HHHHHHHHHH-------HHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHH
Confidence 9999999876 236899999999999999764 4567778888888888899999999999999999999999
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccc-cCHHHHHHHHHHHHHHHHHhhhccccc
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSW-LAVPHALFLGKVFSFFYSVLYPWLNRW 231 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~ 231 (389)
+++. ...++.|+++++++.++.|+++.+.+.+|.+..... .+.
T Consensus 238 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------------------------ 281 (346)
T d1oc2a_ 238 ILTK------------GRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD------------------------ 281 (346)
T ss_dssp HHHH------------CCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC------------------------
T ss_pred HHhh------------cccCccccccccccccchHHHHHHHHHhCCCCcceEECCC------------------------
Confidence 8872 234679999999999999999999999997654322 110
Q ss_pred cCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCC-ChHHHHHHHHHHHHHcc
Q 016468 232 WLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIV-SPREGMAATISYWQDRK 284 (389)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~-sl~~~l~~~v~~~~~~~ 284 (389)
.+. -......|++|++++|||+|++ +++++|+++++||+++.
T Consensus 282 ---~~~--------~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n~ 324 (346)
T d1oc2a_ 282 ---RAG--------HDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQWYTDNQ 324 (346)
T ss_dssp ---CTT--------CCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHHHHHHTH
T ss_pred ---CCC--------CCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHHHHHHHH
Confidence 110 0112357999999999999987 69999999999999854
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=6.9e-29 Score=237.33 Aligned_cols=225 Identities=18% Similarity=0.179 Sum_probs=176.0
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLP-YFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p-~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
..+++.++++|+.||.|++++|++.+++++|++||.. +|++....+..|..+ ..| .+.|+.+|..+|+++.++.
T Consensus 90 ~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~-vy~~~~~~~~~e~~~~~~p----~~~Y~~sK~~~e~~~~~~~ 164 (338)
T d1udca_ 90 VQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSAT-VYGDQPKIPYVESFPTGTP----QSPYGKSKLMVEQILTDLQ 164 (338)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCSCCSSSBCTTSCCCCC----SSHHHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcce-EEccccccccccccccCCC----cchHHHHHhhhhHHHHHHH
Confidence 4577899999999999999999999999999999998 688777666555543 334 7999999999999998754
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------------CCHHHHHHHHHcC-CCcceec------CCCccccceeHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAKLG-LVPFKIG------EPSVKTDWIYVDN 145 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~~~li~~~~~g-~~~~~~g------~~~~~~~~v~vdD 145 (389)
. ...+++++++||++||||+.. ..++.++..+..+ .++.+.| ++++.+||+|++|
T Consensus 165 ~------~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D 238 (338)
T d1udca_ 165 K------AQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp H------HSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred h------hccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEee
Confidence 3 235799999999999998643 1345566655443 3444445 4788899999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLY 225 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~ 225 (389)
+++++..+.+.+. ....+++||+++++++|+.|+++.+.+.+|.+.+....|..
T Consensus 239 ~~~~~~~~~~~~~---------~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~----------------- 292 (338)
T d1udca_ 239 LADGHVVAMEKLA---------NKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR----------------- 292 (338)
T ss_dssp HHHHHHHHHHHHT---------TCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCC-----------------
T ss_pred hhhhccccccccc---------cccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCC-----------------
Confidence 9999988876432 23346799999999999999999999999977664433221
Q ss_pred hccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 226 PWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+.+. .....|++|++++|||+|.++++++|++|++||+++..
T Consensus 293 --------------~~~~----~~~~~d~~k~~~~lgwkp~~~l~egi~~ti~w~~~~~~ 334 (338)
T d1udca_ 293 --------------EGDL----PAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_dssp --------------TTCC----SBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred --------------CCCC----CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhchh
Confidence 0010 12357999999999999999999999999999998754
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=2.1e-28 Score=233.89 Aligned_cols=241 Identities=15% Similarity=0.118 Sum_probs=182.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCC---CCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPY---FPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~---~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++..++.+|+.||.|++++|.+.++ +.+++||.. +|++......+|+.+. .+...+.+.|+.||..+|+++..+
T Consensus 85 ~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~ 162 (342)
T d2blla1 85 RNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSE-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAY 162 (342)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGG-GGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccCCCcchhhhcccchhhhhhhh
Confidence 45678899999999999999999998 567888888 6887766665554332 233445788999999999999988
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILA 153 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a 153 (389)
.+ ..+++++++||+.+|||.... ..+.++..+..|+.+.++|+|++.++|+|++|+|+++..+
T Consensus 163 ~~-------~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~ 235 (342)
T d2blla1 163 GE-------KEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 235 (342)
T ss_dssp HH-------HHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred hc-------ccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeee
Confidence 63 368999999999999985432 3678888899999999999999999999999999999999
Q ss_pred HhcccCCCCCCCCCCCCCCceEEEeCCC-CCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Q 016468 154 SMGLLDDIPGQKGRPIASGQPYFVSDGF-PINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWW 232 (389)
Q Consensus 154 ~~~l~~~~~~~~~~~~~~g~~y~i~~~~-~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~ 232 (389)
++.- .....|++|||++++ ++|+.|+++.+.+.+|.......+|.......
T Consensus 236 ~~~~---------~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~------------------- 287 (342)
T d2blla1 236 IENA---------GNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRV------------------- 287 (342)
T ss_dssp HHCG---------GGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEE-------------------
T ss_pred hhhc---------cccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccce-------------------
Confidence 9831 234568999998764 58999999999999997766555443200000
Q ss_pred CCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 233 LPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
............. ......|++|++++|||+|+++++++|+++++||+++..
T Consensus 288 ~~~~~~~~~~~~~-~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~~~ 339 (342)
T d2blla1 288 VESSSYYGKGYQD-VEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (342)
T ss_dssp C-------------CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred ecccccccccccc-ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCcC
Confidence 0000000000000 112256999999999999999999999999999988654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=3.6e-28 Score=229.47 Aligned_cols=230 Identities=15% Similarity=0.138 Sum_probs=176.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCC-CCCCCcHHHHHHHHHHHHHHhCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPI-DEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~-~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
.+...++++|+.||.|++++|++.+++||||+||.+ |||+....+.+|+.+.... ..+.++|+.||..+|++++.+.
T Consensus 73 ~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~-vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~- 150 (315)
T d1e6ua_ 73 TYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSC-IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYN- 150 (315)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGG-GSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCce-EcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHH-
Confidence 456677889999999999999999999999999999 7998877778887655422 2234679999999999999986
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC-----CH-H-----HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER-----HL-P-----RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----~~-~-----~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
++.|++++++||++||||++.. ++ . ........+......|++.+.++++|++|+++++..++
T Consensus 151 ------~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~~~~ 224 (315)
T d1e6ua_ 151 ------RQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVM 224 (315)
T ss_dssp ------HHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHH
T ss_pred ------HHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHHHhh
Confidence 3368999999999999997652 11 1 22344456777788899999999999999999999998
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
+....... .........++++.+.+.++.++.+.+.+.+|.+......+.
T Consensus 225 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~--------------------------- 274 (315)
T d1e6ua_ 225 ELAHEVWL---ENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS--------------------------- 274 (315)
T ss_dssp HSCHHHHH---HTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT---------------------------
T ss_pred hhcccccc---ccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCC---------------------------
Confidence 63211000 011234567899999999999999999999998754332211
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
.| .+ ......|++|++ +|||+|+++++++|+++++||+++
T Consensus 275 ~~----~~----~~~~~~d~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N 314 (315)
T d1e6ua_ 275 KP----DG----TPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLEN 314 (315)
T ss_dssp SC----CC----CSBCCBCCHHHH-HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred CC----CC----CceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHHc
Confidence 11 00 112357999997 699999999999999999999975
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.6e-28 Score=233.35 Aligned_cols=236 Identities=16% Similarity=0.117 Sum_probs=173.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCC---CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGI---QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gv---krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.++..++++|+.||.|++++|+++++ +|+||+||.. |||.....+.+|++|+.| .++||.||..+|++++.+
T Consensus 97 ~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~-vyg~~~~~~~~E~~~~~P----~~~Yg~sK~~aE~~~~~~ 171 (347)
T d1t2aa_ 97 DLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSE-LYGKVQEIPQKETTPFYP----RSPYGAAKLYAYWIVVNF 171 (347)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGG-GTCSCSSSSBCTTSCCCC----CSHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchh-eecCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHH
Confidence 45666789999999999999999876 4899999988 799877778899999887 799999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCC-C-----HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEER-H-----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~-----~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
. +..+++++++||++||||+... . ...++.....+.....+|++++.++|+|++|+++++..+++.
T Consensus 172 ~-------~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~- 243 (347)
T d1t2aa_ 172 R-------EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN- 243 (347)
T ss_dssp H-------HHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS-
T ss_pred H-------HHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhc-
Confidence 5 2368999999999999996542 1 223444555566677889999999999999999999999972
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
. ..+.|+++.+...++.+....+...++........+... +. ...........
T Consensus 244 ----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~~~ 296 (347)
T d1t2aa_ 244 ----------D--EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENE--------------VG-RCKETGKVHVT 296 (347)
T ss_dssp ----------S--SCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGC--------------EE-EETTTCCEEEE
T ss_pred ----------C--CCccceeccccccccchhhhhhhhhhcceeeecccchhh--------------hh-hhhhcCCceee
Confidence 2 235788999999999999999999998764322111100 00 00000000000
Q ss_pred CCHHHHHHhc-cccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 238 ILPAEVYKVG-VTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 238 ~~~~~~~~~~-~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
.+........ .....|++|++++|||+|+++++++|++|++++.+
T Consensus 297 ~~~~~~rp~~~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~~~~ 342 (347)
T d1t2aa_ 297 VDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVE 342 (347)
T ss_dssp ECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred ecccCCCCCCcCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 0000000011 12246999999999999999999999999987554
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=1.8e-27 Score=228.19 Aligned_cols=228 Identities=19% Similarity=0.188 Sum_probs=170.8
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCccc----CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEI----VNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~----~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
..++..++.+|+.||.|++++|++.+++|+||+||.. |||.... .+.+|+.+..| .+.|+.||..+|++++
T Consensus 91 ~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~-vyg~~~~~~~~~~~~e~~~~~p----~~~Y~~sK~~~E~~~~ 165 (347)
T d1z45a2 91 TQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSAT-VYGDATRFPNMIPIPEECPLGP----TNPYGHTKYAIENILN 165 (347)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGG-GGCCGGGSTTCCSBCTTSCCCC----CSHHHHHHHHHHHHHH
T ss_pred ccCcccccccchhhhHHHHHHHHhcccceEEeeccee-eecCcccCCCCCccccccCCCC----CChhHhHHHHHHHHHH
Confidence 3466788999999999999999999999999999999 6886644 34567777666 7899999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC------------CCHHHHHHHHH-cCCCcceecCCC------cccccee
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAK-LGLVPFKIGEPS------VKTDWIY 142 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~~~li~~~~-~g~~~~~~g~~~------~~~~~v~ 142 (389)
++.+. ...+++++++||++|||+... ..++.++..+. .+.++.++|++. ..+|++|
T Consensus 166 ~~~~~-----~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~ 240 (347)
T d1z45a2 166 DLYNS-----DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240 (347)
T ss_dssp HHHHH-----STTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEE
T ss_pred HHHHh-----hccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeee
Confidence 87421 236899999999999997542 12444444443 244556666654 4567888
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHH
Q 016468 143 VDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYS 222 (389)
Q Consensus 143 vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~ 222 (389)
+.|.+.+++.+++.+... +.....+++||+++++++++.|+++.+.+.+|.+.+....+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-------------- 301 (347)
T d1z45a2 241 VVDLAKGHIAALQYLEAY-----NENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR-------------- 301 (347)
T ss_dssp HHHHHHHHHHHHHHHHHS-----CTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC--------------------
T ss_pred eecccccccccccccccc-----cccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC--------------
Confidence 888999998888754433 1334457899999999999999999999999987654322110
Q ss_pred HhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 223 VLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
+.+. .....|++|++++|||+|.++++++|++|++|++++
T Consensus 302 -----------------~~~~----~~~~~d~sk~~~~lGw~p~~~lee~i~~ti~w~~~n 341 (347)
T d1z45a2 302 -----------------AGDV----LNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTEN 341 (347)
T ss_dssp --------------------C----CCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred -----------------CCCC----CEeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence 1111 123579999999999999999999999999999987
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=5.1e-27 Score=224.63 Aligned_cols=225 Identities=18% Similarity=0.219 Sum_probs=171.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.++....++|+.||.|++++|++.+++++||+||.. +|+.......++..+. ..+.++|+.+|..+|+.+.++.+
T Consensus 99 ~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~-~~~~~~~~~~~~~~~~---~~~~~~Y~~~k~~~e~~~~~~~~- 173 (346)
T d1ek6a_ 99 QKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSAT-VYGNPQYLPLDEAHPT---GGCTNPYGKSKFFIEEMIRDLCQ- 173 (346)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GGCSCSSSSBCTTSCC---CCCSSHHHHHHHHHHHHHHHHHH-
T ss_pred hCHHHHHHhhhcccccccchhhhcCcccccccccce-eeeccccccccccccc---cccCChHHHHHHHHHHHHHHHHH-
Confidence 467788999999999999999999999999999999 5776554433333221 22368999999999999998643
Q ss_pred CCCCCCCCCceEEEEecCceecCCCC------------CCHHHHHHHHH-cCCCcceec------CCCccccceeHHHHH
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEE------------RHLPRIVSLAK-LGLVPFKIG------EPSVKTDWIYVDNLV 147 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~------------~~~~~li~~~~-~g~~~~~~g------~~~~~~~~v~vdDla 147 (389)
...+++.+++||+.+|||... ..++.++..+. .+....+.| ++.+.+||+|++|+|
T Consensus 174 -----~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a 248 (346)
T d1ek6a_ 174 -----ADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLA 248 (346)
T ss_dssp -----HCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHH
T ss_pred -----hccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEecc
Confidence 236899999999999998543 12444444443 344444433 577889999999999
Q ss_pred HHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhc
Q 016468 148 LALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPW 227 (389)
Q Consensus 148 ~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~ 227 (389)
.++..+++.. .....+++|||++++++++.|+++.+.+.+|.+.+....|.+
T Consensus 249 ~~~~~~~~~~---------~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~------------------- 300 (346)
T d1ek6a_ 249 KGHIAALRKL---------KEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR------------------- 300 (346)
T ss_dssp HHHHHHHHHH---------TTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-------------------
T ss_pred chhhhhcccc---------ccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCC-------------------
Confidence 9999887642 233457799999999999999999999999987665433321
Q ss_pred cccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 228 LNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+.+. .....|++|++++|||+|+++++|+|+++++||+++..
T Consensus 301 ------------~~e~----~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~~~n~~ 342 (346)
T d1ek6a_ 301 ------------EGDV----AACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS 342 (346)
T ss_dssp ------------TTCC----SEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred ------------CCCC----CEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHhCHh
Confidence 1111 12357999999999999999999999999999998765
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.93 E-value=3.7e-26 Score=221.79 Aligned_cols=228 Identities=17% Similarity=0.135 Sum_probs=171.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccC-------CCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIV-------NGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~-------~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
.++....++|+.+|.|++++|++.++++++++||.. +|+..... +..|+.+..| .+.|+.||..+|++
T Consensus 111 ~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~e~~~~~p----~~~Y~~sK~~~e~~ 185 (383)
T d1gy8a_ 111 RDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAA-IFGNPTMGSVSTNAEPIDINAKKSP----ESPYGESKLIAERM 185 (383)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG-GTBSCCC-----CCCCBCTTSCCBC----SSHHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhhccCCcccccccccc-cccccccccccccccccccccCCCC----CCHHHhhHhHHHHH
Confidence 356677899999999999999999999999999998 56654332 2345555555 79999999999999
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCCCC-----------CHHHHHHHHH----------------cCCCcceec
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-----------HLPRIVSLAK----------------LGLVPFKIG 132 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-----------~~~~li~~~~----------------~g~~~~~~g 132 (389)
+.++.. ..|++++++||+++|||++.. .++.++..+. .+....++|
T Consensus 186 ~~~~~~-------~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g 258 (383)
T d1gy8a_ 186 IRDCAE-------AYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFG 258 (383)
T ss_dssp HHHHHH-------HHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEEC
T ss_pred HHHHHH-------HhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeC
Confidence 999862 368999999999999997752 2344544432 233333443
Q ss_pred ------CCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccC
Q 016468 133 ------EPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLA 206 (389)
Q Consensus 133 ------~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p 206 (389)
+|++.+||+|++|+|+++..+++.+....+. .....+++||+++++++++.|+++.+.+.+|.+.+....+
T Consensus 259 ~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~---~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~ 335 (383)
T d1gy8a_ 259 TDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPN---DKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECG 335 (383)
T ss_dssp SCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTT---TGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEEC
T ss_pred CccccCCCCeEEeeEEHHHHHHHHHHHHhhhcccccc---ccccCccEEEeCCCCceeHHHHHHHHHHHhCCCCceEECC
Confidence 5788899999999999999998754432111 2234578999999999999999999999999876654332
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHH-HHHHHHcc
Q 016468 207 VPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAAT-ISYWQDRK 284 (389)
Q Consensus 207 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~-v~~~~~~~ 284 (389)
.. + .++ .....|++|++++|||+|+++++++|.++ +.|++.+.
T Consensus 336 ~~---------------------------~----~d~----~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~~ 379 (383)
T d1gy8a_ 336 RR---------------------------E----GDP----AYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHP 379 (383)
T ss_dssp CC---------------------------T----TCC----SEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCT
T ss_pred CC---------------------------C----CCc----CEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhCc
Confidence 10 0 000 12356999999999999999999999887 57887653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=5.8e-25 Score=209.02 Aligned_cols=219 Identities=17% Similarity=0.161 Sum_probs=165.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC-----CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG-----IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g-----vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.++......|+.|+.+++++|+..+ ..++++.||.. +|+... .+.+|+.|..| .+.|+.||..+|+++.
T Consensus 97 ~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~-~~~~~~-~~~~E~~~~~p----~~~Y~~sK~~~E~~~~ 170 (339)
T d1n7ha_ 97 EIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSE-MFGSTP-PPQSETTPFHP----RSPYAASKCAAHWYTV 170 (339)
T ss_dssp HSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGG-GGTTSC-SSBCTTSCCCC----CSHHHHHHHHHHHHHH
T ss_pred cCccccccccccccchhhhhhhhcccccccceeeeecccce-ecccCC-CCCCCCCCCCC----cchhhHHHHHHHHHHH
Confidence 4677888999999999999998643 44788888876 565543 46789998877 7999999999999999
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC-CHH----HHHHHHH-cCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER-HLP----RIVSLAK-LGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~-~~~----~li~~~~-~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.. ..+++++++||++||||.... ... ..+.... .+......|++.+.+||+|++|+++++.++++
T Consensus 171 ~~~~-------~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~ 243 (339)
T d1n7ha_ 171 NYRE-------AYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQ 243 (339)
T ss_dssp HHHH-------HHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHT
T ss_pred HHHH-------HhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHh
Confidence 8863 368999999999999997542 222 2222333 34445667999999999999999999999997
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCcc-ccCHHHHHHHHHHHHHHHHHhhhccccccCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKS-WLAVPHALFLGKVFSFFYSVLYPWLNRWWLP 234 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~-~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 234 (389)
.+. +..++++.+.+.+..|+++.+.+.+|...+.. .+..
T Consensus 244 -----------~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 283 (339)
T d1n7ha_ 244 -----------QEK--PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--------------------------- 283 (339)
T ss_dssp -----------SSS--CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG---------------------------
T ss_pred -----------cCC--CCccccccccccccchhhhhhhhhhhcccCceeeecc---------------------------
Confidence 222 34567788899999999999999999764321 1110
Q ss_pred CCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 235 QPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
....+.+ ......|++|++++|||+|+++++++|++|++||.+.
T Consensus 284 -~~~r~~~----~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~~ 327 (339)
T d1n7ha_ 284 -RYFRPAE----VDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLEL 327 (339)
T ss_dssp -GGSCSSC----CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCC----CCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHHH
Confidence 0000100 1122569999999999999999999999999999764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=6.3e-25 Score=213.62 Aligned_cols=220 Identities=18% Similarity=0.141 Sum_probs=162.8
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCe-EEEecCCceecCCcccCCCCC--------------CCCCCCCCCCCCcHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQR-LVYVSTYNVVFGGKEIVNGNE--------------SLPYFPIDEHVDSYGRS 72 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkr-lV~~SS~~vvyg~~~~~~~~E--------------~~p~~p~~~~~~~Y~~S 72 (389)
++..++++|+.||.|++++|++.++++ +++.||.. +|+..... .+| ..+..| .+.|+.|
T Consensus 112 ~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p----~~~Y~~s 185 (393)
T d1i24a_ 112 RAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTPNID-IEEGYITITHNGRTDTLPYPKQA----SSFYHLS 185 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCCSSC-BCSSEEEEEETTEEEEEECCCCC----CSHHHHH
T ss_pred ccccccccccccccHHHHHHHHhccccceeeccccc-cccccccc-ccccccccccccccccccccccc----ccHHHHH
Confidence 345678999999999999999998775 55555554 78754321 111 123333 6899999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-------------------CCHHHHHHHHHcCCCcceecC
Q 016468 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-------------------RHLPRIVSLAKLGLVPFKIGE 133 (389)
Q Consensus 73 K~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-------------------~~~~~li~~~~~g~~~~~~g~ 133 (389)
|..+|+++..+. ++.+++++++||++||||++. ..++.++..+..|++..++|+
T Consensus 186 K~~aE~~~~~~~-------~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~ 258 (393)
T d1i24a_ 186 KVHDSHNIAFTC-------KAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGK 258 (393)
T ss_dssp HHHHHHHHHHHH-------HHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETT
T ss_pred hhhhcccccccc-------cccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeee
Confidence 999999999886 346899999999999999753 135778888899999999999
Q ss_pred CCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEE-eCCCCCChHHHHHHHHHhC---CCCCCccccCHHH
Q 016468 134 PSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFV-SDGFPINTFEFIGPLLKTL---DYDLPKSWLAVPH 209 (389)
Q Consensus 134 ~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i-~~~~~~s~~e~~~~l~~~l---g~~~~~~~~p~~~ 209 (389)
+.+.+||+||+|+|+++.++++ ++...|+.+.+ ++++.+|+.|+++.+.+.. |...+....+
T Consensus 259 ~~~~rd~v~v~D~~~a~~~~~~-----------~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~~~~~~--- 324 (393)
T d1i24a_ 259 GGQTRGYLDIRDTVQCVEIAIA-----------NPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVP--- 324 (393)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHH-----------SCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCCEEEEC---
T ss_pred cccccccccccchHHHHHHHHH-----------hhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcceeecc---
Confidence 9999999999999999999998 44455554433 4567899999998887764 4333322221
Q ss_pred HHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 210 ALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 210 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
.|.... -......|++|++ +|||+|+++++++++++++|+++.+.
T Consensus 325 -------------------------~~~~~~-----~~~~~~~d~~k~~-~LGw~P~~~~~~~i~~~~~~~~~~k~ 369 (393)
T d1i24a_ 325 -------------------------NPRVEA-----EEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKD 369 (393)
T ss_dssp -------------------------CSSCSC-----SSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred -------------------------CCCCCC-----CccEecCCHHHHH-HcCCccccCHHHHHHHHHHHHHHHHH
Confidence 111100 0112246889987 59999999999999999999988654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.91 E-value=1e-24 Score=206.61 Aligned_cols=220 Identities=18% Similarity=0.178 Sum_probs=169.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCC----------------CCCCCCCCCCCCCCcHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNG----------------NESLPYFPIDEHVDSYG 70 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~----------------~E~~p~~p~~~~~~~Y~ 70 (389)
.+++.+.++|+.||.||+++|.+.+++++|+.||..++++.....+. ++..+..| .+.|+
T Consensus 90 ~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~y~ 165 (338)
T d1orra_ 90 DNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF----HSPYG 165 (338)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC----CHHHH
T ss_pred cChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc----ccccc
Confidence 46788999999999999999999999988888888866665433221 12233333 78999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHH-----cCCCcceecCCCccccc
Q 016468 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAK-----LGLVPFKIGEPSVKTDW 140 (389)
Q Consensus 71 ~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~-----~g~~~~~~g~~~~~~~~ 140 (389)
.+|..+|.++.... +..+...+++|++.+||+... ...+.++..+. .+++..++|+|.+.++|
T Consensus 166 ~~k~~~e~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~ 238 (338)
T d1orra_ 166 CSKGAADQYMLDYA-------RIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 238 (338)
T ss_dssp HHHHHHHHHHHHHH-------HHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred cccchhhhhhhhhh-------hccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEee
Confidence 99999999988775 236789999999999987553 23455555543 36677888999999999
Q ss_pred eeHHHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeC--CCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHH
Q 016468 141 IYVDNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSD--GFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFS 218 (389)
Q Consensus 141 v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~--~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~ 218 (389)
+|++|+|++++.+++. .....|++|++.. +.++++.|+++.+.+..|.+.+....|..
T Consensus 239 ~~v~D~~~~~~~~l~~----------~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~---------- 298 (338)
T d1orra_ 239 LHAEDMISLYFTALAN----------VSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVR---------- 298 (338)
T ss_dssp EEHHHHHHHHHHHHHT----------HHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCC----------
T ss_pred ecccchhhHHHHHHhc----------cccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCC----------
Confidence 9999999999999873 2334688999854 56789999999999999987665443321
Q ss_pred HHHHHhhhccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHH
Q 016468 219 FFYSVLYPWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQD 282 (389)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~ 282 (389)
+. + ......|++|++++|||+|+++++++|+++++||+.
T Consensus 299 -----------------~~----~----~~~~~~d~~k~~~~Lg~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 299 -----------------ES----D----QRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp -----------------SS----C----CSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -----------------CC----C----cCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence 10 0 011246999999999999999999999999999985
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.1e-23 Score=196.23 Aligned_cols=217 Identities=16% Similarity=0.157 Sum_probs=151.4
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
...+.+...+.|+.++.+++++|+..+++ +|+.||.. ++++......+|+.+..| .+.|+.+|..+|.++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~-~~~~~~~~~~~~~~~~~~----~~~Y~~~K~~~e~~~~~~~ 155 (307)
T d1eq2a_ 82 TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAA-TYGGRTSDFIESREYEKP----LNVYGYSKFLFDEYVRQIL 155 (307)
T ss_dssp TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGG-GGTTCCSCBCSSGGGCCC----SSHHHHHHHHHHHHHHHHG
T ss_pred ccccccccccccccccccccccccccccc-cccccccc-cccccccccccccccccc----ccccccccchhhhhccccc
Confidence 34567778899999999999999999995 67777766 455554444455555444 7999999999999999987
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcce-ecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFK-IGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~-~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.+++++++||++||||+.. .....++..+..++...+ .|++.+.++|+|++|+++++..+++.
T Consensus 156 -------~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~- 227 (307)
T d1eq2a_ 156 -------PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN- 227 (307)
T ss_dssp -------GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH-
T ss_pred -------cccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhh-
Confidence 347899999999999999764 235677788888775544 48888999999999999999998872
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPL 237 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (389)
+ ....||++++++.|++|+++.+.+..+.. ....+|.+
T Consensus 228 ----------~--~~~~~~~~~~~~~si~~i~~~i~~~~~~~-~i~~~~~~----------------------------- 265 (307)
T d1eq2a_ 228 ----------G--VSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFP----------------------------- 265 (307)
T ss_dssp ----------C--CCEEEEESCSCCBCHHHHHHHC---------------------------------------------
T ss_pred ----------c--cccccccccccchhHHHHHHHHHHhcCCC-CeeEeeCC-----------------------------
Confidence 2 34689999999999999999997765532 11111110
Q ss_pred CCHHHHHHh-ccccccchHHHHHhCCCCCCCChHHHHHHHHHHH
Q 016468 238 ILPAEVYKV-GVTHYFSLLKAKDELCYVPIVSPREGMAATISYW 280 (389)
Q Consensus 238 ~~~~~~~~~-~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~ 280 (389)
+..... ......|++|+++.+||+|.++++++|+++++|+
T Consensus 266 ---~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 266 ---DKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp ---------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred ---ccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 001010 1112459999999999999999999999999996
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.88 E-value=1.4e-22 Score=193.71 Aligned_cols=234 Identities=19% Similarity=0.184 Sum_probs=164.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCe-EEEecCCceecCCc-ccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQR-LVYVSTYNVVFGGK-EIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkr-lV~~SS~~vvyg~~-~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.++..+..+|+.|+.|++++|++.+.++ +++.||.. ++++. ...+.+|+.+..| .++|+.+|..+|..+..+.
T Consensus 97 ~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~~~~p----~~~y~~~k~~~e~~~~~~~ 171 (356)
T d1rkxa_ 97 SEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDK-CYDNKEWIWGYRENEAMGG----YDPYSNSKGCAELVTSSYR 171 (356)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGG-GBCCCCSSSCBCTTSCBCC----SSHHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccchhhhhhhhccccccccccccccc-cccccccccccccccccCC----CCccccccccchhhhhHHh
Confidence 4678899999999999999999986544 55555544 44433 3445567777666 7999999999999888654
Q ss_pred CCCCCC--CCCCCceEEEEecCceecCCCC---CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 85 GRPFKK--NNRKCLYTCAVRPAAIYGPGEE---RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 85 ~~~~~~--~~~~gl~~~ilRp~~IyGp~~~---~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... ....++.++++||+++|||++. +.++.+++.+..+. ...++++++.++++|++|+++++..+++....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~ 250 (356)
T d1rkxa_ 172 NSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQ-PVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYT 250 (356)
T ss_dssp HHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTC-CEECSCTTCEECCEETHHHHHHHHHHHHHHHH
T ss_pred hhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCC-ceEEeeccccccccccccccchhhhhhhhhcc
Confidence 211000 0124688999999999999863 34566777666555 55789999999999999999999998874221
Q ss_pred CCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLIL 239 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (389)
. +.....+..++...+..++..++++.+.+.+|...+....+. ..
T Consensus 251 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------------------------------~~ 295 (356)
T d1rkxa_ 251 D-----GAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN------------------------------AH 295 (356)
T ss_dssp T-----CGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-----------------------------------
T ss_pred c-----ccccccccccccccccccccchhhhhhHHHhCCCccEEEcCC------------------------------CC
Confidence 1 011112222333456789999999999999987654321110 00
Q ss_pred HHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHccc
Q 016468 240 PAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDRKR 285 (389)
Q Consensus 240 ~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~~~ 285 (389)
+.+ ......|++|++++|||+|+++++++|++|++||++...
T Consensus 296 ~~~----~~~~~~d~skak~~LGw~P~~~l~egi~~ti~wyk~~~~ 337 (356)
T d1rkxa_ 296 PHE----AHYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHKNWLS 337 (356)
T ss_dssp --C----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCC----cCeeeEcHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHc
Confidence 111 112257999999999999999999999999999998543
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.87 E-value=3.2e-22 Score=190.97 Aligned_cols=221 Identities=15% Similarity=0.033 Sum_probs=153.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-CCCeEEEecCCceecCCcccCC---CCCCC------------CCCCCCCCCCcHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-GIQRLVYVSTYNVVFGGKEIVN---GNESL------------PYFPIDEHVDSYG 70 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-gvkrlV~~SS~~vvyg~~~~~~---~~E~~------------p~~p~~~~~~~Y~ 70 (389)
.++..++..|+.||.|++++|.+. +++++||+||.++++++.+... .+|+. +......+.+.|+
T Consensus 98 ~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~ 177 (342)
T d1y1pa1 98 NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYA 177 (342)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHH
T ss_pred ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCccc
Confidence 456678889999999999999997 6999999999886655443321 12221 1111123367899
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 71 RSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 71 ~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
.||..+|++++.+.+. .+.+++++++||+.||||... ..+..++..+..|...... .+.+.++|+|++|
T Consensus 178 ~sK~~~E~~~~~~~~~-----~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v~D 251 (342)
T d1y1pa1 178 ASKTEAELAAWKFMDE-----NKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSAVD 251 (342)
T ss_dssp HHHHHHHHHHHHHHHH-----HCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEHHH
T ss_pred chhHhHHHHHHHhhhh-----cccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeHHH
Confidence 9999999998877531 124688999999999998532 3466777788888754433 4556689999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhh
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLY 225 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~ 225 (389)
+|++++.+++ ++...| .|+++.+++++++|+++.+.+.++...-...+|..
T Consensus 252 va~~~i~~l~-----------~~~~~g-~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~~----------------- 302 (342)
T d1y1pa1 252 IGLLHLGCLV-----------LPQIER-RRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQ----------------- 302 (342)
T ss_dssp HHHHHHHHHH-----------CTTCCS-CEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCCC-----------------
T ss_pred HHHHHHHhhc-----------Cccccc-eEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCcc-----------------
Confidence 9999999998 445555 46688889999999999999987432111111110
Q ss_pred hccccccCCCCCCCHHHHHHhccccccchHHHHHhCCCCCCCChHHHHHHHHHH
Q 016468 226 PWLNRWWLPQPLILPAEVYKVGVTHYFSLLKAKDELCYVPIVSPREGMAATISY 279 (389)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~ 279 (389)
..+. ...+ .-.+.+..+.|||+|.++++++|+++++.
T Consensus 303 --------~~~~--------~~~~-~~~s~~~~k~lg~~~~~~lee~i~d~I~s 339 (342)
T d1y1pa1 303 --------GQDL--------SKFD-TAPSLEILKSLGRPGWRSIEESIKDLVGS 339 (342)
T ss_dssp --------CCCC--------CEEC-CHHHHHHHHHTTCCSCCCHHHHHHHHHCC
T ss_pred --------Cccc--------cccc-chHHHHHHHHcCCCCCcCHHHHHHHHHHh
Confidence 0000 0011 11234444569999998999999999864
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.86 E-value=3.1e-21 Score=177.84 Aligned_cols=211 Identities=17% Similarity=0.137 Sum_probs=170.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+++.....|+..+.++.+.+...+. +++++||.. +|+.....+.+|+++..| .+.|+.+|..+|+++.+..
T Consensus 70 ~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~-v~~~~~~~~~~e~~~~~~----~~~~~~~k~~~e~~~~~~~-- 141 (281)
T d1vl0a_ 70 EQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDY-VFDGEAKEPITEFDEVNP----QSAYGKTKLEGENFVKALN-- 141 (281)
T ss_dssp HCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGG-GSCSCCSSCBCTTSCCCC----CSHHHHHHHHHHHHHHHHC--
T ss_pred ccchhhcccccccccccccccccccc-cccccccce-eeeccccccccccccccc----hhhhhhhhhHHHHHHHHhC--
Confidence 45567788999999999999988876 688888888 688888888888888777 7999999999999998874
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
.+.+++||++||||+.+ ....++..+..+......+ ++.++++|++|+++++..+++.
T Consensus 142 ---------~~~~i~R~~~vyG~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~---------- 199 (281)
T d1vl0a_ 142 ---------PKYYIVRTAWLYGDGNN-FVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDE---------- 199 (281)
T ss_dssp ---------SSEEEEEECSEESSSSC-HHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHH----------
T ss_pred ---------CCccccceeEEeCCCcc-cccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhh----------
Confidence 78999999999999764 5677888888887666665 4789999999999999999983
Q ss_pred CCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHh
Q 016468 167 RPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVYKV 246 (389)
Q Consensus 167 ~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (389)
+ ....||+++++++|+.|+++.+.+.+|.+.+..++|.. ..+++...|
T Consensus 200 -~--~~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~-----------------------~~~~~a~rp------ 247 (281)
T d1vl0a_ 200 -K--NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTE-----------------------EFPRPAKRP------ 247 (281)
T ss_dssp -T--CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECST-----------------------TSCCSSCCC------
T ss_pred -c--ccCceeEeCCCccchHHHHHHHHHHhCCCceEEeccHH-----------------------HcCCcCCCc------
Confidence 2 23489999999999999999999999988766555431 001110000
Q ss_pred ccccccchHHHHHhCCCCCCCChHHHHHHHHHHHH
Q 016468 247 GVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQ 281 (389)
Q Consensus 247 ~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~ 281 (389)
.....|++|+++++||+|+ +++++|++++++++
T Consensus 248 -~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 248 -KYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ 280 (281)
T ss_dssp -SBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred -cccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence 1124799999999999998 99999999999985
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.77 E-value=6.5e-19 Score=162.94 Aligned_cols=227 Identities=14% Similarity=0.025 Sum_probs=160.5
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+..+++...++|+.++.+++++|++.++ ++++.||.. +|++....+.+|+.+..| .+.|+.+|..+|+.+..+.
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~-~~~~~~~~~~~E~~~~~p----~~~y~~~k~~~e~~~~~~~ 143 (298)
T d1n2sa_ 70 AESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDY-VFPGTGDIPWQETDATSP----LNVYGKTKLAGEKALQDNC 143 (298)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGG-GSCCCTTCCBCTTSCCCC----SSHHHHHHHHHHHHHHHHC
T ss_pred cccCccccccccccccccchhhhhcccc-ccccccccc-cccCCCCCCCccccccCC----CchHhhhhhhhhhhHHhhh
Confidence 3567788999999999999999999887 688999988 577777778899988877 7999999999999999875
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
...+++|++..|+.........+...+..+...... +.+..+++|++|+++++..+++...
T Consensus 144 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~------ 204 (298)
T d1n2sa_ 144 -----------PKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVAL------ 204 (298)
T ss_dssp -----------SSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHH------
T ss_pred -----------cccccccccceeeccCCccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhh------
Confidence 234566666666554444455566666666554443 4567899999999999988876322
Q ss_pred CCCCCCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHH
Q 016468 165 KGRPIASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFFYSVLYPWLNRWWLPQPLILPAEVY 244 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (389)
.....+++||+++++.++..|+++.+.+..+.......++.. .+.... ..+.+ ..+
T Consensus 205 --~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------------~~i~~~-~~~~~-a~R---- 260 (298)
T d1n2sa_ 205 --NKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTEL----------------NAVPTS-AYPTP-ASR---- 260 (298)
T ss_dssp --HCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEE----------------EEECST-TSCCS-SCC----
T ss_pred --ccccccccccccCCCceecHHHHHHHHhhhhccCccccccce----------------eeeehh-hcCcc-CCC----
Confidence 123356799999999999999999887765432111111100 000000 00000 000
Q ss_pred HhccccccchHHHHHhCCCCCCCChHHHHHHHHHHHHHc
Q 016468 245 KVGVTHYFSLLKAKDELCYVPIVSPREGMAATISYWQDR 283 (389)
Q Consensus 245 ~~~~~~~~d~~ka~~~LG~~p~~sl~~~l~~~v~~~~~~ 283 (389)
-....+|++|+++++||+|+ +++++|+++++.+...
T Consensus 261 --P~~~~ld~~K~~~~~~~~~~-~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 261 --PGNSRLNTEKFQRNFDLILP-QWELGVKRMLTEMFTT 296 (298)
T ss_dssp --CSBCCBCCHHHHHHHTCCCC-BHHHHHHHHHHHHHSC
T ss_pred --ccccccCHHHHHHHHCCCCC-cHHHHHHHHHHHHHhh
Confidence 01225799999999999998 9999999999988653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.56 E-value=1.2e-15 Score=141.43 Aligned_cols=164 Identities=14% Similarity=0.023 Sum_probs=124.9
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
....|..++.+++++|.+.+..++++.||.++ ++. .+..+..| ...|..+|..+|+...+.
T Consensus 87 ~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~-~~~------~~~~~~~~----~~~~~~~~~~~~~~~~~~-------- 147 (312)
T d1qyda_ 87 VLSHHILEQLKLVEAIKEAGNIKRFLPSEFGM-DPD------IMEHALQP----GSITFIDKRKVRRAIEAA-------- 147 (312)
T ss_dssp SSSTTTTTHHHHHHHHHHSCCCSEEECSCCSS-CTT------SCCCCCSS----TTHHHHHHHHHHHHHHHT--------
T ss_pred ccccchhhhhHHHHHHHHhcCCcEEEEeeccc-cCC------Ccccccch----hhhhhHHHHHHHHhhccc--------
Confidence 34678899999999999999889999998763 322 22222222 578888888888876554
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
+++++++||+.+||+...............+....+++++++.++|+|++|+|++++.+++ .+...
T Consensus 148 ---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~-----------~~~~~ 213 (312)
T d1qyda_ 148 ---SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID-----------DPQTL 213 (312)
T ss_dssp ---TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT-----------CGGGS
T ss_pred ---ccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhc-----------Ccccc
Confidence 5899999999999986553322222333345556778999999999999999999999997 44455
Q ss_pred Cce-EEEeCCCCCChHHHHHHHHHhCCCCCCccccCHH
Q 016468 172 GQP-YFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVP 208 (389)
Q Consensus 172 g~~-y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~ 208 (389)
++. |++++++.+|++|+++.+.+.+|.+.+...+|..
T Consensus 214 ~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~ 251 (312)
T d1qyda_ 214 NKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQ 251 (312)
T ss_dssp SSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSH
T ss_pred CceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHH
Confidence 555 5566678899999999999999998887778764
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.50 E-value=3.8e-15 Score=136.96 Aligned_cols=162 Identities=15% Similarity=0.117 Sum_probs=123.1
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
....|..++.+++++++..+++++++.||... . .++.....+ ...+...+...|..+.+.
T Consensus 84 ~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~-~-------~~~~~~~~~----~~~~~~~~~~~~~~~~~~-------- 143 (307)
T d1qyca_ 84 VGSLQIESQVNIIKAIKEVGTVKRFFPSEFGN-D-------VDNVHAVEP----AKSVFEVKAKVRRAIEAE-------- 143 (307)
T ss_dssp CCGGGSGGGHHHHHHHHHHCCCSEEECSCCSS-C-------TTSCCCCTT----HHHHHHHHHHHHHHHHHH--------
T ss_pred ccccccchhhHHHHHHHHhccccceeeecccc-c-------ccccccccc----ccccccccccccchhhcc--------
Confidence 34567888999999999999999999998763 1 122222222 456777788888887765
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
+++++++||+.+||+.... +..++....++.....++++++.++|+|++|+|++++.+++ .+...
T Consensus 144 ---~~~~~i~r~~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~-----------~~~~~ 208 (307)
T d1qyca_ 144 ---GIPYTYVSSNCFAGYFLRS-LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD-----------DPRTL 208 (307)
T ss_dssp ---TCCBEEEECCEEHHHHTTT-TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS-----------CGGGT
T ss_pred ---CCCceecccceecCCCccc-hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhc-----------Chhhc
Confidence 4889999999999986643 22233334455556778999999999999999999999886 44455
Q ss_pred Cce-EEEeCCCCCChHHHHHHHHHhCCCCCCccccCHH
Q 016468 172 GQP-YFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAVP 208 (389)
Q Consensus 172 g~~-y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~~ 208 (389)
++. |++++++.+|+.|+++.+.+.+|.+.+...+|..
T Consensus 209 ~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~ 246 (307)
T d1qyca_ 209 NKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEE 246 (307)
T ss_dssp TEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHH
T ss_pred CceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHH
Confidence 555 4557789999999999999999998777777765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=7.7e-13 Score=118.26 Aligned_cols=116 Identities=15% Similarity=0.001 Sum_probs=87.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+...+.++|+.++.+++++|.+.++++|||+||..+ + +.. .+.|+++|..+|+.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~-~---------~~~--------~~~Y~~~K~~~E~~l~~~~-- 154 (232)
T d2bkaa1 95 AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA-D---------KSS--------NFLYLQVKGEVEAKVEELK-- 154 (232)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-C---------TTC--------SSHHHHHHHHHHHHHHTTC--
T ss_pred cchhhhhhhcccccceeeecccccCccccccCCcccc-c---------cCc--------cchhHHHHHHhhhcccccc--
Confidence 3456778999999999999999999999999999884 2 111 3789999999999998764
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.-.++|+||+.|||+++.... ..++....... ..+......||++|+|++++.++.
T Consensus 155 --------~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~~~~ 211 (232)
T d2bkaa1 155 --------FDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLNNVV 211 (232)
T ss_dssp --------CSEEEEEECCEEECTTGGGSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHHHHT
T ss_pred --------ccceEEecCceeecCCCcCcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHHHHh
Confidence 124899999999999776432 23333333222 223344567999999999998886
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.34 E-value=1.1e-12 Score=115.37 Aligned_cols=114 Identities=22% Similarity=0.178 Sum_probs=84.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+.+.+.++|+.++.+++++|++.+++++||+||.++ ++. ..+.|+++|..+|+.+.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~-~~~-----------------~~~~y~~~K~~~E~~l~~~~-- 137 (212)
T d2a35a1 78 GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA-DAK-----------------SSIFYNRVKGELEQALQEQG-- 137 (212)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTT-----------------CSSHHHHHHHHHHHHHTTSC--
T ss_pred ccccccccchhhhhhhccccccccccccccccccccc-ccc-----------------cccchhHHHHHHhhhccccc--
Confidence 3456789999999999999999999999999999884 321 14789999999999987653
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
--+++|+||+.|||+++...+...+ . ...... .....++||++|+|++++.+++
T Consensus 138 --------~~~~~I~Rp~~v~G~~~~~~~~~~~---~-~~~~~~---~~~~~~~i~v~DvA~ai~~~~~ 191 (212)
T d2a35a1 138 --------WPQLTIARPSLLFGPREEFRLAEIL---A-APIARI---LPGKYHGIEACDLARALWRLAL 191 (212)
T ss_dssp --------CSEEEEEECCSEESTTSCEEGGGGT---T-CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred --------cccceeeCCcceeCCcccccHHHHH---H-HHHhhc---cCCCCcEEEHHHHHHHHHHHHc
Confidence 1258999999999998763222211 1 111111 1234578999999999999986
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=2.6e-11 Score=105.98 Aligned_cols=121 Identities=14% Similarity=0.102 Sum_probs=93.5
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
...+|..+++|++++++++|++|+|++||.++ ++.. +..+. ....|...|..+|+++.+.
T Consensus 83 ~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~-~~~~------~~~~~-----~~~~~~~~~~~~e~~l~~~-------- 142 (205)
T d1hdoa_ 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSAFL-LWDP------TKVPP-----RLQAVTDDHIRMHKVLRES-------- 142 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSCT------TCSCG-----GGHHHHHHHHHHHHHHHHT--------
T ss_pred hhhhhHHHHHHHHHHHHhcCCCeEEEEeeeec-cCCC------ccccc-----cccccchHHHHHHHHHHhc--------
Confidence 34678899999999999999999999999884 4321 11111 1357899999999988754
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKGRPIAS 171 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~~~~~~ 171 (389)
+++++++||+.+++.... +. .....++.....+++++|+|++++.+++ .+...
T Consensus 143 ---~~~~tiirp~~~~~~~~~------------~~-~~~~~~~~~~~~~i~~~DvA~~~~~~l~-----------~~~~~ 195 (205)
T d1hdoa_ 143 ---GLKYVAVMPPHIGDQPLT------------GA-YTVTLDGRGPSRVISKHDLGHFMLRCLT-----------TDEYD 195 (205)
T ss_dssp ---CSEEEEECCSEEECCCCC------------SC-CEEESSSCSSCSEEEHHHHHHHHHHTTS-----------CSTTT
T ss_pred ---CCceEEEecceecCCCCc------------cc-EEEeeCCCCCCCcCCHHHHHHHHHHHhC-----------CCCCC
Confidence 599999999999875433 22 3445667788899999999999999987 55667
Q ss_pred CceEEEeC
Q 016468 172 GQPYFVSD 179 (389)
Q Consensus 172 g~~y~i~~ 179 (389)
|+.+.++.
T Consensus 196 g~~~~~s~ 203 (205)
T d1hdoa_ 196 GHSTYPSH 203 (205)
T ss_dssp TCEEEEEC
T ss_pred CEEEecCC
Confidence 88887764
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.04 E-value=1.6e-10 Score=101.72 Aligned_cols=148 Identities=14% Similarity=0.040 Sum_probs=102.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
.+......+|+.++.++++.+...+.++..+.|+..+ +.. ..+. .......|...+...+....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~---- 163 (252)
T d2q46a1 99 EDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGG-TNP--------DHPL--NKLGNGNILVWKRKAEQYLAD---- 163 (252)
T ss_dssp CTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTT-TCT--------TCGG--GGGGGCCHHHHHHHHHHHHHH----
T ss_pred ccchhhhccccccceeecccccccccccccccccccc-CCC--------Cccc--ccccccchhhhhhhhhhhhhc----
Confidence 3456678899999999999999999999999998763 211 1111 112246777777777766554
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQKG 166 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~~ 166 (389)
.+++++++||+.+||+..... ..+ .+..... .....+++|++|+|++++.+++
T Consensus 164 -------~~~~~~ilRp~~v~g~~~~~~-----~~~-~~~~~~~---~~~~~~~i~~~Dva~a~~~~l~----------- 216 (252)
T d2q46a1 164 -------SGTPYTIIRAGGLLDKEGGVR-----ELL-VGKDDEL---LQTDTKTVPRADVAEVCIQALL----------- 216 (252)
T ss_dssp -------SSSCEEEEEECEEECSCTTSS-----CEE-EESTTGG---GGSSCCEEEHHHHHHHHHHHTT-----------
T ss_pred -------ccccceeecceEEECCCcchh-----hhh-hccCccc---ccCCCCeEEHHHHHHHHHHHhC-----------
Confidence 369999999999999976521 000 0111111 1334679999999999999987
Q ss_pred CCCCCCceEEEeCC---CCCChHHHHHHHHHhC
Q 016468 167 RPIASGQPYFVSDG---FPINTFEFIGPLLKTL 196 (389)
Q Consensus 167 ~~~~~g~~y~i~~~---~~~s~~e~~~~l~~~l 196 (389)
++...|++|||+++ ...++.|+.+.+.+..
T Consensus 217 ~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 217 FEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp CGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred CccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 56678999999864 3466777777665544
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.94 E-value=2.5e-10 Score=107.55 Aligned_cols=161 Identities=12% Similarity=0.015 Sum_probs=112.4
Q ss_pred hhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC
Q 016468 12 VDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKN 91 (389)
Q Consensus 12 ~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~ 91 (389)
....|+..+.|++++|++.|++|+|+.||... . +..+..+ ...|..+|...|+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~-~---------~~~~~~~----~~~~~~~k~~~~~~~~~~-------- 139 (350)
T d1xgka_ 82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD-H---------SLYGPWP----AVPMWAPKFTVENYVRQL-------- 139 (350)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC-G---------GGTSSCC----CCTTTHHHHHHHHHHHTS--------
T ss_pred ccchhhhhhhHHHHHHHHhCCCceEEEeeccc-c---------ccCCccc----chhhhhhHHHHHHHHHhh--------
Confidence 34568889999999999999999999998663 1 1111111 467889999999988765
Q ss_pred CCCCceEEEEecCceecCCCCCCHHHHH-HHHHcCCC-cceecCCCccccceeH-HHHHHHHHHHHhcccCCCCCCCCCC
Q 016468 92 NRKCLYTCAVRPAAIYGPGEERHLPRIV-SLAKLGLV-PFKIGEPSVKTDWIYV-DNLVLALILASMGLLDDIPGQKGRP 168 (389)
Q Consensus 92 ~~~gl~~~ilRp~~IyGp~~~~~~~~li-~~~~~g~~-~~~~g~~~~~~~~v~v-dDla~a~~~a~~~l~~~~~~~~~~~ 168 (389)
+++++++||+..++.......+... .....+.. ...+.+++..++++++ +|+++++..++... ..
T Consensus 140 ---~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~---------~~ 207 (350)
T d1xgka_ 140 ---GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG---------PQ 207 (350)
T ss_dssp ---SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC---------HH
T ss_pred ---ccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC---------hh
Confidence 4889999999988753221111000 01112221 2344677888899986 79999999888621 12
Q ss_pred CCCCceEEEeCCCCCChHHHHHHHHHhCCCCCCccccCH
Q 016468 169 IASGQPYFVSDGFPINTFEFIGPLLKTLDYDLPKSWLAV 207 (389)
Q Consensus 169 ~~~g~~y~i~~~~~~s~~e~~~~l~~~lg~~~~~~~~p~ 207 (389)
...|+.|++++ +.+|+.|+++.+.+.+|.+.....+|.
T Consensus 208 ~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp~ 245 (350)
T d1xgka_ 208 KWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPK 245 (350)
T ss_dssp HHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred hcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECCH
Confidence 34688998886 569999999999999998866555653
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.65 E-value=7.7e-05 Score=66.01 Aligned_cols=136 Identities=12% Similarity=0.072 Sum_probs=93.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++. +.+-.++|.+||..+..+. | ....|+.||+..+.+.+.
T Consensus 109 ~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~----------~------~~~~Y~asKaal~~ltr~ 172 (251)
T d2c07a1 109 DEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN----------V------GQANYSSSKAGVIGFTKS 172 (251)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------T------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC----------C------CCHHHHHHHHHHHHHHHH
Confidence 4678899999999988888775 3456799999998753221 1 146899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..... .+.|+++.+|.|+.|--+..........+.+...-+.- -+...+|++.++..++..
T Consensus 173 lA~el----~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL~S~------ 233 (251)
T d2c07a1 173 LAKEL----ASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAG---------RMGTPEEVANLACFLSSD------ 233 (251)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHHHSG------
T ss_pred HHHHh----hhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCc------
Confidence 65321 23689999999999976644444455555555443221 256789999999877741
Q ss_pred CCCCCCCCCCceEEEeCC
Q 016468 163 GQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 234 ---~s~~itG~~i~vDGG 248 (251)
T d2c07a1 234 ---KSGYINGRVFVIDGG 248 (251)
T ss_dssp ---GGTTCCSCEEEESTT
T ss_pred ---hhCCCcCcEEEECCC
Confidence 134567999888766
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.55 E-value=6.2e-05 Score=66.30 Aligned_cols=137 Identities=10% Similarity=0.063 Sum_probs=92.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|++||..+..+. | ....|+.||+..+.+.+.
T Consensus 100 ~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~----------~------~~~~Y~asKaal~~lt~~ 163 (243)
T d1q7ba_ 100 EEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN----------G------GQANYAAAKAGLIGFSKS 163 (243)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T------TCHHHHHHHHHHHHHHHH
T ss_pred cccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC----------C------CCHHHHHHHHHHHHHHHH
Confidence 46778899999999999998853 455689999998753221 1 146899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
...+. .+.|+++.++.|+.|--+-.....+.....+....+. .-+...+|+|+++..++..
T Consensus 164 lA~el----a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~------ 224 (243)
T d1q7ba_ 164 LAREV----ASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPA---------GRLGGAQEIANAVAFLASD------ 224 (243)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTT---------SSCBCHHHHHHHHHHHHSG------
T ss_pred HHHHh----CccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCc------
Confidence 64211 2368999999999884331112223333333332221 1256789999999887741
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 225 ---~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 225 ---EAAYITGETLHVNGGM 240 (243)
T ss_dssp ---GGTTCCSCEEEESTTS
T ss_pred ---hhcCCcCCeEEECCCe
Confidence 1345689999888774
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.54 E-value=5.7e-05 Score=66.31 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=88.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++..+.+++. +.+-.++|++||..+..+. + ....|+.||+..+.+.+.
T Consensus 95 e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~----------~------~~~~Y~asKaal~~lt~~ 158 (237)
T d1uzma1 95 EKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------G------NQANYAASKAGVIGMARS 158 (237)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC----------c------ccHHHHHHHHHHHHHHHH
Confidence 4678899999999887777654 4566799999998753221 1 146899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
...+. .+.|+++..+.|+.|.-+-....-....+......+. .-+...+|+|+++..++..
T Consensus 159 lA~e~----~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~------ 219 (237)
T d1uzma1 159 IAREL----SKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPA---------KRVGTPAEVAGVVSFLASE------ 219 (237)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTT---------CSCBCHHHHHHHHHHHHSG------
T ss_pred HHhhh----hcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc------
Confidence 54211 2368999999999885331111111222222222111 1256789999999887741
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 220 ---~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 220 ---DASYISGAVIPVDGGM 235 (237)
T ss_dssp ---GGTTCCSCEEEESTTT
T ss_pred ---hhcCCcCCeEEECCCC
Confidence 0345679999887763
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00014 Score=63.89 Aligned_cols=132 Identities=14% Similarity=0.057 Sum_probs=84.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVA 76 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~a 76 (389)
.+.+.++++|+.++-++.+++... +-.++|++||..+..+ .| ....|+.||+..
T Consensus 107 ~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~----------~~------~~~~Y~asKaal 170 (248)
T d2o23a1 107 EDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG----------QV------GQAAYSASKGGI 170 (248)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC----------CT------TCHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC----------CC------CchHHHHHHHHH
Confidence 356688999999999999998653 2337999999875221 11 146899999999
Q ss_pred HHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 77 EQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 77 E~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
+.+.+...... .+.|+++.++-|+.|.-+..........+...+..+ +.+ -+...+|+|+++..+++
T Consensus 171 ~~lt~~la~e~----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~p--l~~------R~g~peevA~~v~fL~s- 237 (248)
T d2o23a1 171 VGMTLPIARDL----APIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVP--FPS------RLGDPAEYAHLVQAIIE- 237 (248)
T ss_dssp HHHHHHHHHHH----GGGTEEEEEEEECCBCCC----------CHHHHTCS--SSC------SCBCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHh----cccCcceeeeccCceecchhhcCCHHHHHHHHhcCC--CCC------CCcCHHHHHHHHHHHHh-
Confidence 99988775321 236899999999988654332222222222222211 111 14578999999988876
Q ss_pred ccCCCCCCCCCCCCCCceEEE
Q 016468 157 LLDDIPGQKGRPIASGQPYFV 177 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i 177 (389)
.+-..|++++|
T Consensus 238 ----------~~~itGq~I~v 248 (248)
T d2o23a1 238 ----------NPFLNGEVIRL 248 (248)
T ss_dssp ----------CTTCCSCEEEE
T ss_pred ----------CCCCCceEeEC
Confidence 44567887664
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.42 E-value=0.00014 Score=63.95 Aligned_cols=138 Identities=12% Similarity=0.091 Sum_probs=92.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.++.++.+++.. .+-.++|++||..+..+ .+ ....|+.||+..+.+.+.
T Consensus 101 ~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~----------~~------~~~~Y~asKaal~~ltk~ 164 (244)
T d1edoa_ 101 SQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----------NI------GQANYAAAKAGVIGFSKT 164 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----------CT------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC----------CC------CCHHHHHHHHHHHHChHH
Confidence 46778999999999999888754 45669999999875332 11 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..... .+.|+++.++-|+.|--+-.........+.+....+. .-+...+|+++++..++.. +
T Consensus 165 lA~el----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl---------~R~~~p~dvA~~v~fLa~S--~--- 226 (244)
T d1edoa_ 165 AAREG----ASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPL---------GRTGQPENVAGLVEFLALS--P--- 226 (244)
T ss_dssp HHHHH----HTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTT---------CSCBCHHHHHHHHHHHHHC--S---
T ss_pred HHHHH----hhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHHCC--c---
Confidence 65321 2368999999998885331112223344444433222 1256789999999876520 0
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 227 ---~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 227 ---AASYITGQAFTIDGGI 242 (244)
T ss_dssp ---GGGGCCSCEEEESTTT
T ss_pred ---hhcCCcCCeEEeCCCe
Confidence 0334689998887763
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.28 E-value=0.00059 Score=60.04 Aligned_cols=138 Identities=14% Similarity=0.152 Sum_probs=93.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++. +.+-.++|++||... +.+ .+ ....|+.||+..+.+.+.
T Consensus 94 e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~-~~~---------~~------~~~~Y~asKaal~~lt~~ 157 (252)
T d1zmta1 94 EDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP-FGP---------WK------ELSTYTSARAGACTLANA 157 (252)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT-TSC---------CT------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc-ccc---------cc------cccccccccccHHHHHHH
Confidence 3566788999999988888874 345568999999874 211 11 146899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--------HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--------LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--------~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
..... .+.|+++.+|.|+.|-.+..... .+.....+.+..+.- -+...+|+|.+++.++
T Consensus 158 lA~el----a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL~ 224 (252)
T d1zmta1 158 LSKEL----GEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------RLGTQKELGELVAFLA 224 (252)
T ss_dssp HHHHH----GGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------SCBCHHHHHHHHHHHH
T ss_pred HHHHh----cccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence 64321 23689999999999876543221 233444444333221 1456899999998887
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.. ...-..|+.+.+.+|-.
T Consensus 225 S~---------~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 225 SG---------SCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp TT---------SCGGGTTCEEEESTTCC
T ss_pred Cc---------hhcCCcCCeEEECCCce
Confidence 41 13456899998887743
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.27 E-value=0.00056 Score=60.34 Aligned_cols=136 Identities=18% Similarity=0.137 Sum_probs=91.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH------cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE------FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~------~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.+.+.++++|+.|+.++.+++.. .+-.++|.+||.....+ .| ....|+.||+..+.+.
T Consensus 101 e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~----------~~------~~~~Y~asKaal~~lt 164 (257)
T d2rhca1 101 ELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG----------VV------HAAPYSASKHGVVGFT 164 (257)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc----------cc------cchhHHHHHHHHHHHH
Confidence 46778999999999999999864 34568999999875211 11 1468999999999888
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCC-----------CCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHH
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE-----------ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLA 149 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~-----------~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a 149 (389)
+...... .+.|+++.++-|+.|--|.. ....+...+.+....+.- -+...+|++++
T Consensus 165 k~lA~el----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg---------R~~~pedia~~ 231 (257)
T d2rhca1 165 KALGLEL----ARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG---------RYVQPSEVAEM 231 (257)
T ss_dssp HHHHHHT----TTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS---------SCBCHHHHHHH
T ss_pred HHHHHHh----hhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence 8765321 34789999999998842210 011223333333322211 25678999999
Q ss_pred HHHHHhcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 150 LILASMGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 150 ~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
+..++.. ...-..|+.+.+.+|
T Consensus 232 v~fL~S~---------~s~~itG~~i~vDGG 253 (257)
T d2rhca1 232 VAYLIGP---------GAAAVTAQALNVCGG 253 (257)
T ss_dssp HHHHTSG---------GGTTCCSCEEEESTT
T ss_pred HHHHhCc---------hhcCCcCceEEECcC
Confidence 9888741 144567999888766
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.27 E-value=0.0006 Score=61.76 Aligned_cols=163 Identities=12% Similarity=0.126 Sum_probs=106.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++.+++.. .+-.++|++||..+.++. + ....|+.||+..+.+.+.
T Consensus 112 e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~----------~------~~~~Y~asKaal~~lt~~ 175 (302)
T d1gz6a_ 112 EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN----------F------GQANYSAAKLGLLGLANT 175 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------T------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC----------C------CcHHHHHHHHHHHHHHHH
Confidence 46778999999999999888754 455699999998864431 1 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
.... ..+.|+++.++-|+.+--+.+. ..+ +.....+..+|++.+++.++..
T Consensus 176 la~E----~~~~gIrVN~I~PG~~~t~~~~-~~~------------------~~~~~~~~PedvA~~v~fL~S~------ 226 (302)
T d1gz6a_ 176 LVIE----GRKNNIHCNTIAPNAGSRMTET-VMP------------------EDLVEALKPEYVAPLVLWLCHE------ 226 (302)
T ss_dssp HHHH----TGGGTEEEEEEEEECCSTTTGG-GSC------------------HHHHHHSCGGGTHHHHHHHTST------
T ss_pred HHHH----HhccCCceeeeCCCCCCcchhh-cCc------------------HhhHhcCCHHHHHHHHHHHcCC------
Confidence 6532 1347899999999765211111 000 1112234468999998887631
Q ss_pred CCCCCCCCCCceEEEeCC-------------------CCCChHHHHHHHHHhCCCCCCccccCHHHHHHHHHHHHHH
Q 016468 163 GQKGRPIASGQPYFVSDG-------------------FPINTFEFIGPLLKTLDYDLPKSWLAVPHALFLGKVFSFF 220 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~-------------------~~~s~~e~~~~l~~~lg~~~~~~~~p~~~~~~~a~~~~~~ 220 (389)
.....|+++.+.+| .+.|..++.+.+.+....... ..|.......+.+++.+
T Consensus 227 ----~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~~~~--~~p~~~~~~~~~~~~~~ 297 (302)
T d1gz6a_ 227 ----SCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA--SKPKSIQESTGGIIEVL 297 (302)
T ss_dssp ----TCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC--BCCCCHHHHHHHHHHHH
T ss_pred ----CcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCcccC--cCCCCHHHHHHHHHHHH
Confidence 22357887776544 356778888888877765543 33454455555555444
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.26 E-value=0.00092 Score=58.42 Aligned_cols=137 Identities=16% Similarity=0.058 Sum_probs=92.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++... +-.+++.+||.. ..+ .| . ...|+.||+..+.+.+.
T Consensus 99 ~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~----------~~--~----~~~Y~asKaal~~ltk~ 161 (242)
T d1ulsa_ 99 EDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLG----------NL--G----QANYAASMAGVVGLTRT 161 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGC----------CT--T----CHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccC----------CC--C----CcchHHHHHHHHHHHHH
Confidence 467889999999999999988653 445677777754 221 11 1 46899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
..... .+.|+++..+.|+.|--+-.........+......+.-. +...+|+++++..++..
T Consensus 162 lA~el----a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R---------~~~pedia~~v~fL~S~------ 222 (242)
T d1ulsa_ 162 LALEL----GRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGR---------AGKPLEVAYAALFLLSD------ 222 (242)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCS---------CBCHHHHHHHHHHHHSG------
T ss_pred HHHHH----hhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHHHhch------
Confidence 64321 236899999999999765444333444444444433222 45688999999887741
Q ss_pred CCCCCCCCCCceEEEeCCCC
Q 016468 163 GQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+.+.+.+|..
T Consensus 223 ---~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 223 ---ESSFITGQVLFVDGGRT 239 (242)
T ss_dssp ---GGTTCCSCEEEESTTTT
T ss_pred ---hhCCCCCcEEEECCCcc
Confidence 13456899998877754
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00039 Score=61.34 Aligned_cols=138 Identities=11% Similarity=0.021 Sum_probs=88.5
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHHc----C---CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLEF----G---IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQ 78 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~~----g---vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~ 78 (389)
..+.+..+++|+.++.++..++... + -.++|.+||..+..+ .| ....|+.||+..+.
T Consensus 95 ~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~ 158 (254)
T d2gdza1 95 EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP----------VA------QQPVYCASKHGIVG 158 (254)
T ss_dssp SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHH
T ss_pred cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC----------CC------CccchHHHHHHHHH
Confidence 3567889999999998888888643 1 246999999875211 11 14689999999988
Q ss_pred HHHH--hCCCCCCCCCCCCceEEEEecCceecCCCCC------------CHHHHHHHHHcCCCcceecCCCccccceeHH
Q 016468 79 LVLK--SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER------------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVD 144 (389)
Q Consensus 79 ~l~~--~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~------------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vd 144 (389)
+.+. .... + .+.|+++.++.|+.|--+--+. ....+.+.+-.+ -+...+
T Consensus 159 ltrs~ala~e-~---~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------------r~~~pe 221 (254)
T d2gdza1 159 FTRSAALAAN-L---MNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY-------------GILDPP 221 (254)
T ss_dssp HHHHHHHHHH-H---HTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH-------------CCBCHH
T ss_pred HHHHHHHHHH-h---cCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC-------------CCcCHH
Confidence 7653 1100 0 2368999999999874210000 001111111111 145679
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCCCChHH
Q 016468 145 NLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFPINTFE 187 (389)
Q Consensus 145 Dla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s~~e 187 (389)
|+|++++.++. .+...|+++.+.+|..+.++|
T Consensus 222 dvA~~v~fL~s-----------~~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 222 LIANGLITLIE-----------DDALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp HHHHHHHHHHH-----------CTTCSSCEEEEETTTEEEECC
T ss_pred HHHHHHHHHHc-----------CCCCCCCEEEECCCCeeeccc
Confidence 99999998887 345789999999988766544
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.17 E-value=0.00041 Score=61.12 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=78.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRP 87 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~ 87 (389)
+.+.++++|+.|+.++.+++...+..++|.+||..+.+|... ...|+.+|+..|.+..+...
T Consensus 112 ~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~----------------~~~YaAaka~l~~la~~~~~-- 173 (259)
T d2fr1a1 112 RIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG----------------LGGYAPGNAYLDGLAQQRRS-- 173 (259)
T ss_dssp HHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT----------------CTTTHHHHHHHHHHHHHHHH--
T ss_pred HHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc----------------cHHHHHHHHhHHHHHHHHHh--
Confidence 456678999999999999998888889999999886543211 46799999999998887742
Q ss_pred CCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 88 FKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 88 ~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.|++++.|.|+.+.+++-.. ..+.+.+. ..-...+..+++++++..++.
T Consensus 174 ------~Gi~v~~I~pg~~~~~g~~~--~~~~~~~~-----------~~G~~~~~~~~~~~~l~~~l~ 222 (259)
T d2fr1a1 174 ------DGLPATAVAWGTWAGSGMAE--GPVADRFR-----------RHGVIEMPPETACRALQNALD 222 (259)
T ss_dssp ------TTCCCEEEEECCBC--------------CT-----------TTTEECBCHHHHHHHHHHHHH
T ss_pred ------CCCCEEECCCCcccCCcccc--chHHHHHH-----------hcCCCCCCHHHHHHHHHHHHh
Confidence 68999999999887654321 01111110 111345778999999998887
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.11 E-value=0.00065 Score=60.03 Aligned_cols=138 Identities=15% Similarity=0.143 Sum_probs=91.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+-.++|.+||..+..+ .| ....|+.||+..+.+.+.
T Consensus 106 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~ 169 (258)
T d1iy8a_ 106 AEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG----------IG------NQSGYAAAKHGVVGLTRN 169 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB----------CS------SBHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC----------CC------CchHHHHHHHHHHHHHHH
Confidence 46778999999999999988743 35568999999875221 11 147899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC--------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
..... .+.|+++..+-|+.|.-|-.. .......+.+....+. .-+...+|+|+++..++
T Consensus 170 lA~el----~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~p~dvA~~v~fL~ 236 (258)
T d1iy8a_ 170 SAVEY----GRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---------KRYGEAPEIAAVVAFLL 236 (258)
T ss_dssp HHHHH----GGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHT
T ss_pred HHHHh----CccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHh
Confidence 64311 236899999999988533100 0112222222222211 12567899999998877
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
.. ...-..|+.+.+.+|..
T Consensus 237 S~---------~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 237 SD---------DASYVNATVVPIDGGQS 255 (258)
T ss_dssp SG---------GGTTCCSCEEEESTTTT
T ss_pred Cc---------hhcCCcCceEEcCcchh
Confidence 41 13456899998888764
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.11 E-value=0.00086 Score=59.22 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=91.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+...++|+.++.++.+++.. .+..++|++||..+. . ..|. ...|+.+|...+.+.+.
T Consensus 106 ~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~-~---------~~~~------~~~Y~~sK~al~~lt~~ 169 (258)
T d1ae1a_ 106 KDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF-S---------ALPS------VSLYSASKGAINQMTKS 169 (258)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGT-S---------CCTT------CHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhccccccccccccccccccccccccccccccccc-c---------cccc------chhHHHHHHHHHHHHHH
Confidence 46788999999999999887753 456799999998751 1 1111 47899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCC------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEER------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
..... .+.|+++.+|.|+.|.-+.... ......+.+...-+. .-+...+|+|.++..++..
T Consensus 170 lA~el----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------gR~~~pediA~~v~fL~S~ 236 (258)
T d1ae1a_ 170 LACEW----AKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------GRAGKPQEVSALIAFLCFP 236 (258)
T ss_dssp HHHHH----GGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------CSCBCHHHHHHHHHHHHSG
T ss_pred HHHhc----CcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCh
Confidence 65321 2368999999999997653221 122333333322211 1267899999999888741
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
+ ..-..|+.+.+.+|-
T Consensus 237 ---~------s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 237 ---A------ASYITGQIIWADGGF 252 (258)
T ss_dssp ---G------GTTCCSCEEEESTTG
T ss_pred ---h------hCCCcCcEEEeCCCe
Confidence 0 345689988887764
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00088 Score=59.02 Aligned_cols=137 Identities=19% Similarity=0.109 Sum_probs=92.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|.+||..+..+ .| ....|+.||+..+.+.+.
T Consensus 109 e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~ 172 (255)
T d1fmca_ 109 ADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK----------NI------NMTSYASSKAAASHLVRN 172 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC----------CT------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc----------cc------ccccchhHHHHHHHHHHH
Confidence 46778999999999999887754 34558999999774211 11 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..... .+.|+++.+|-|+.|--+... ..-+...+.+.+.-+.- -+...+|+|+++..++..
T Consensus 173 lA~el----~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~---------R~g~pedvA~~v~fL~S~----- 234 (255)
T d1fmca_ 173 MAFDL----GEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR---------RLGQPQDIANAALFLCSP----- 234 (255)
T ss_dssp HHHHH----HTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC---------SCBCHHHHHHHHHHHHSG-----
T ss_pred HHHHh----CccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCc-----
Confidence 65311 236899999999988544211 12244444444433221 245689999999888741
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|.
T Consensus 235 ----~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 235 ----AASWVSGQILTVSGGG 250 (255)
T ss_dssp ----GGTTCCSCEEEESTTS
T ss_pred ----hhcCCcCCEEEECcCc
Confidence 1345689999888875
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.08 E-value=0.00086 Score=59.48 Aligned_cols=141 Identities=16% Similarity=0.170 Sum_probs=92.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+-.++|.+||.....++. + ....|+.||+..+.+.+.
T Consensus 106 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~------------~---~~~~Y~asKaal~~lt~~ 170 (268)
T d2bgka1 106 EDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE------------G---VSHVYTATKHAVLGLTTS 170 (268)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT------------T---SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc------------c---cccccchhHHHHHhCHHH
Confidence 35677889999999999988864 3456899999987532210 0 124799999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC----HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~----~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
..... .+.|+++.+|-|+.|-.|-.... -...-........ ..+ -+...+|+|++++.++..
T Consensus 171 lA~el----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~~g------r~~~pedvA~~v~fL~S~-- 236 (268)
T d2bgka1 171 LCTEL----GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAAN--LKG------TLLRAEDVADAVAYLAGD-- 236 (268)
T ss_dssp HHHHH----GGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCS--SCS------CCCCHHHHHHHHHHHHSG--
T ss_pred HHHHh----ChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccc--cCC------CCcCHHHHHHHHHHHhCh--
Confidence 64321 23689999999999877643321 1222222222211 011 256789999999887741
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
...-..|+.+.+.+|-..
T Consensus 237 -------~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 237 -------ESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp -------GGTTCCSCEEEESTTGGG
T ss_pred -------hhCCccCceEEECcCccc
Confidence 144568999988887543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.08 E-value=0.00048 Score=60.58 Aligned_cols=138 Identities=17% Similarity=0.088 Sum_probs=89.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++.. .+-.++|.+||..+..+ .| ....|+.||+..+.+.+.
T Consensus 98 e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~ltk~ 161 (248)
T d2d1ya1 98 PEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFA----------EQ------ENAAYNASKGGLVNLTRS 161 (248)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSB----------CT------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccccc----------cc------ccchhHHHHHHHHHHHHH
Confidence 46778999999999999998864 34568999999875221 11 147899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
..... .+.|+++..+-|+.|--|... .......+.+.... ...-+...+|+++++..++..
T Consensus 162 lA~el----~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------pl~R~~~pedia~~v~fL~S~ 228 (248)
T d2d1ya1 162 LALDL----APLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLH---------ALRRLGKPEEVAEAVLFLASE 228 (248)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTS---------TTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHh----hhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCc
Confidence 64321 236899999999887432100 00001111111111 112356789999999887741
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+.+.+.+|-.
T Consensus 229 ---------~s~~itG~~i~vDGG~t 245 (248)
T d2d1ya1 229 ---------KASFITGAILPVDGGMT 245 (248)
T ss_dssp ---------GGTTCCSCEEEESTTGG
T ss_pred ---------hhcCCCCcEEEcCcCcc
Confidence 14456899998877743
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.06 E-value=0.00068 Score=59.64 Aligned_cols=138 Identities=17% Similarity=0.125 Sum_probs=90.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++... +-.++|.+||..+-.+ +.. ....|+.||+..+.+.+.
T Consensus 105 e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~-----------~~~----~~~~Y~asKaal~~lt~~ 169 (251)
T d1vl8a_ 105 DEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TMP----NISAYAASKGGVASLTKA 169 (251)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CSS----SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccc-----------cCc----cccchHHHHHhHHHHHHH
Confidence 467788999999999999987653 4569999999653111 110 146899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
..... .+.|+++.++-|+.|--+..... -+...+.+.+.-+.-. +...+|+|++++.++..
T Consensus 170 lA~e~----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R---------~~~pedvA~~v~fL~S~---- 232 (251)
T d1vl8a_ 170 LAKEW----GRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGR---------TGVPEDLKGVAVFLASE---- 232 (251)
T ss_dssp HHHHH----GGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHHHHSG----
T ss_pred HHHHh----cccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCC---------CCCHHHHHHHHHHHhCc----
Confidence 64311 23689999999998865432211 1233333433332221 34578999998877641
Q ss_pred CCCCCCCCCCCCceEEEeCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 233 -----~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 233 -----EAKYVTGQIIFVDGGW 248 (251)
T ss_dssp -----GGTTCCSCEEEESTTG
T ss_pred -----hhCCCcCcEEEeCcCe
Confidence 1345679998887763
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.05 E-value=0.0011 Score=58.50 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=87.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++. +.+-.++|++||.....+ .+ ....|+.||+..+.+.+.
T Consensus 101 ~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~ 164 (254)
T d1hdca_ 101 ERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG----------LA------LTSSYGASKWGVRGLSKL 164 (254)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHHH
T ss_pred cccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc----------cc------chhhHHHHHHHHHHHHHH
Confidence 4667899999999999999885 345679999999875211 11 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceec-CCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIG-EPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g-~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..... .+.|+++.++-|+.|.-+ +.............. .+-. +--...+|+|.++..++...
T Consensus 165 lA~e~----a~~gIrVN~I~PG~v~T~--------~~~~~~~~~~~~~~~~~pl~-R~g~~PedvA~~v~fL~S~~---- 227 (254)
T d1hdca_ 165 AAVEL----GTDRIRVNSVHPGMTYTP--------MTAETGIRQGEGNYPNTPMG-RVGNEPGEIAGAVVKLLSDT---- 227 (254)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCH--------HHHHHTCCCSTTSCTTSTTS-SCB-CHHHHHHHHHHHHSGG----
T ss_pred HHHHh----CCCceEEEEeeeCcccCc--------cchhcCHHHHHHHHhCCCCC-CCCCCHHHHHHHHHHHhchh----
Confidence 65321 236899999999988422 122111111000000 0001 11134799999998877410
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
..-..|+.+.+.+|-
T Consensus 228 -----a~~itG~~i~vDGG~ 242 (254)
T d1hdca_ 228 -----SSYVTGAELAVDGGW 242 (254)
T ss_dssp -----GTTCCSCEEEESTTT
T ss_pred -----hCCCCCceEEeCCCc
Confidence 334679999887774
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.05 E-value=0.00057 Score=59.98 Aligned_cols=138 Identities=13% Similarity=0.135 Sum_probs=85.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|++||..+..+ .| ....|+.||+..+.+.+.
T Consensus 102 e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~ltk~ 165 (247)
T d2ew8a1 102 EQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK----------IE------AYTHYISTKAANIGFTRA 165 (247)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC----------CS------SCHHHHHHHHHHHHHHHH
T ss_pred HHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc----------Cc------ccccchhhhccHHHHHHH
Confidence 46788999999999999888753 45568999999875211 11 146899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..... .+.|+++.+|.|+.|--+..+... ....+...... ...--+...+|+|+++..++..
T Consensus 166 lA~el----a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~--------~~l~r~~~pedvA~~v~fL~S~----- 228 (247)
T d2ew8a1 166 LASDL----GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--------QAIPRLQVPLDLTGAAAFLASD----- 228 (247)
T ss_dssp HHHHH----GGGTEEEEEEEECCC------------------CTT--------SSSCSCCCTHHHHHHHHHHTSG-----
T ss_pred HHHHh----cccCeEEEEEeeCCCCCccccccccchhHHHHHHHh--------ccCCCCCCHHHHHHHHHHHhCc-----
Confidence 64311 236899999999988654322111 11111111110 0111245679999999887641
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 229 ----~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 229 ----DASFITGQTLAVDGGM 244 (247)
T ss_dssp ----GGTTCCSCEEEESSSC
T ss_pred ----hhcCCcCCeEEECCCE
Confidence 1344689998887763
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.04 E-value=0.00055 Score=59.25 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=90.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc----------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF----------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~----------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
..+..+++|+.++.++...+... +-.++|++||..+..+. | ....|+.||+..+
T Consensus 92 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~----------~------~~~~Y~asKaal~ 155 (241)
T d1uaya_ 92 SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ----------I------GQAAYAASKGGVV 155 (241)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC----------T------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC----------C------CchhhHHHHHHHH
Confidence 45677899999999888877543 33489999998753221 1 1478999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.+...... .+.|+++.++-|+.|--+.................+. .+ -+...+|+++++..++.
T Consensus 156 ~lt~~lA~el----a~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~--~~------R~g~pedvA~~v~fL~s-- 221 (241)
T d1uaya_ 156 ALTLPAAREL----AGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF--PP------RLGRPEEYAALVLHILE-- 221 (241)
T ss_dssp HHHHHHHHHH----GGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS--SC------SCCCHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHH----hhcCCceeeecCCcccccccchhhhhHHHHHHhcCCC--CC------CCcCHHHHHHHHHHHHh--
Confidence 8888765321 2368999999999885432222222333333322211 11 14468999999988876
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
..-..|+++.+.+|-.
T Consensus 222 ---------~~~iTG~~i~VDGG~~ 237 (241)
T d1uaya_ 222 ---------NPMLNGEVVRLDGALR 237 (241)
T ss_dssp ---------CTTCCSCEEEESTTCC
T ss_pred ---------CCCCCCCEEEECCccc
Confidence 3457899998877743
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.01 E-value=0.00048 Score=60.97 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=80.3
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+-++.+++.. .+-.++|++||.....+ .+ ....|+.||+..+.+.+.
T Consensus 108 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~ 171 (259)
T d1xq1a_ 108 EDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS----------AS------VGSIYSATKGALNQLARN 171 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc----------cc------ccccccccccchhhhhHH
Confidence 46788999999999988887754 45669999999775221 11 147899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHH-HHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLP-RIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~-~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
..... ...|+++.++-|+.|--|-...... ...+.+....+. .-+...+|+|.++..++..
T Consensus 172 lA~e~----~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S~----- 233 (259)
T d1xq1a_ 172 LACEW----ASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPL---------GRFGEPEEVSSLVAFLCMP----- 233 (259)
T ss_dssp HHHHH----GGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSG-----
T ss_pred HHHHh----cccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCC---------CCCcCHHHHHHHHHHHhCc-----
Confidence 64321 2368999999999886543221111 111111111111 1245678999999877631
Q ss_pred CCCCCCCCCCCceEEEeCCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+.+.+.+|-.
T Consensus 234 ----~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 234 ----AASYITGQTICVDGGLT 250 (259)
T ss_dssp ----GGTTCCSCEEECCCCEE
T ss_pred ----hhcCCcCcEEEeCCCEE
Confidence 13456799888877743
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.01 E-value=0.00058 Score=60.37 Aligned_cols=145 Identities=12% Similarity=0.151 Sum_probs=86.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|.+||..+..+ .| ....|+.||+..+.+.+.
T Consensus 105 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~ 168 (260)
T d1x1ta1 105 EKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA----------SA------NKSAYVAAKHGVVGFTKV 168 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHHH
T ss_pred HhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec----------cC------CcchhhhhhhhHHHhHHH
Confidence 46778999999999888887753 45569999999875221 11 146899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCC---CcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGL---VPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~---~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..... .+.|+++..+.|+.|--|-.+.............. ....+.......-+...+|+++++..++..
T Consensus 169 lA~el----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~--- 241 (260)
T d1x1ta1 169 TALET----AGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD--- 241 (260)
T ss_dssp HHHHH----TTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSG---
T ss_pred HHHHh----chhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh---
Confidence 64321 34789999999998854422211111110000000 000000000111256789999999887741
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 242 ------~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 242 ------AAAQITGTTVSVDGG 256 (260)
T ss_dssp ------GGTTCCSCEEEESTT
T ss_pred ------hhCCCcCCEEEECcc
Confidence 144568999888776
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.01 E-value=0.0018 Score=56.99 Aligned_cols=129 Identities=10% Similarity=0.025 Sum_probs=83.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC------CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG------IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g------vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
+.+.++++|+.++.++.+++...= -.++|.+||..+..+ .| ....|+.||+..+.+.+
T Consensus 118 ~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~ 181 (259)
T d1oaaa_ 118 EVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP----------YK------GWGLYCAGKAARDMLYQ 181 (259)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC----------Cc------cchHHHHHHHHHHHHHH
Confidence 466789999999999999997642 247999999875211 11 14789999999999988
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
.+.. ...|+++.++.|+.|-.+... ..-+.....+....+ . -.+...+|+|++++.+++.
T Consensus 182 ~la~------e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-----~----~r~~~p~evA~~i~~ll~~ 246 (259)
T d1oaaa_ 182 VLAA------EEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS-----D----GALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp HHHH------HCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH-----T----TCSBCHHHHHHHHHHHHHH
T ss_pred HHHh------CCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCC-----C----CCCCCHHHHHHHHHHHhhh
Confidence 8754 236899999999988543110 000111121111100 0 1245689999999887752
Q ss_pred ccCCCCCCCCCCCCCCceEEE
Q 016468 157 LLDDIPGQKGRPIASGQPYFV 177 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i 177 (389)
..-..|+.+++
T Consensus 247 ----------~s~~TG~~idv 257 (259)
T d1oaaa_ 247 ----------DTFQSGAHVDF 257 (259)
T ss_dssp ----------CCSCTTEEEET
T ss_pred ----------ccCCCCCeEEe
Confidence 23456776654
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.92 E-value=0.0012 Score=57.75 Aligned_cols=132 Identities=13% Similarity=0.158 Sum_probs=88.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|++||.....+ .+ ....|+.||+..+.+.+.
T Consensus 102 ~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~ltk~ 165 (244)
T d1nffa_ 102 TEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG----------TV------ACHGYTATKFAVRGLTKS 165 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT------TBHHHHHHHHHHHHHHHH
T ss_pred HHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc----------cc------cccchhhHHHHHHHHHHH
Confidence 46778999999999999887743 34568999999875211 11 146899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIP 162 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~ 162 (389)
...+. .+.|+++..|-|+.|--|-.+.. .... ......-+...+|+|+++..++..
T Consensus 166 lA~el----~~~gIrVN~I~PG~i~T~~~~~~--------~~~~------~~~pl~R~~~p~diA~~v~fL~s~------ 221 (244)
T d1nffa_ 166 TALEL----GPSGIRVNSIHPGLVKTPMTDWV--------PEDI------FQTALGRAAEPVEVSNLVVYLASD------ 221 (244)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCSGGGTTS--------CTTC------SCCSSSSCBCHHHHHHHHHHHHSG------
T ss_pred HHHHh----cccCEEEEEEeeCCccChhHhhh--------hHHH------HhccccCCCCHHHHHHHHHHHhCh------
Confidence 65321 23689999999998864422110 0000 001112367899999999887741
Q ss_pred CCCCCCCCCCceEEEeCCC
Q 016468 163 GQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 163 ~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|.
T Consensus 222 ---~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 222 ---ESSYSTGAEFVVDGGT 237 (244)
T ss_dssp ---GGTTCCSCEEEESTTG
T ss_pred ---hhCCCcCCEEEECCCe
Confidence 1345689999887764
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.92 E-value=0.0012 Score=58.16 Aligned_cols=144 Identities=13% Similarity=0.124 Sum_probs=88.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++.. .+ -.++|.+||..... ..| ....|+.||+..+.+.+
T Consensus 100 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------~~~------~~~~Y~asKaal~~ltk 163 (255)
T d1gega_ 100 EIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------GNP------ELAVYSSSKFAVRGLTQ 163 (255)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------CCT------TBHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc----------cCc------ccccchhCHHHHHhhHH
Confidence 45678999999999999988743 33 45799999977421 111 14689999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc--CCCcc----eecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL--GLVPF----KIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~--g~~~~----~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...... .+.|+++..+-|+.|--| ....+...... +.... .+.......-+...+|+|+++..++.
T Consensus 164 ~lA~el----~~~gIrVN~I~PG~i~T~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S 235 (255)
T d1gega_ 164 TAARDL----APLGITVNGYCPGIVKTP----MWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS 235 (255)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBSSH----HHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHh----hhhCcEEEEEecCcccCh----HHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 764211 236899999999988422 11122111110 00000 00000111125678999999988774
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
. ...-..|+.+.+.+|--+
T Consensus 236 ~---------~a~~itG~~i~vDGG~~~ 254 (255)
T d1gega_ 236 P---------DSDYMTGQSLLIDGGMVF 254 (255)
T ss_dssp G---------GGTTCCSCEEEESSSSSC
T ss_pred c---------hhCCccCcEEEecCCEEe
Confidence 1 134567999988877543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=96.91 E-value=0.0021 Score=56.61 Aligned_cols=137 Identities=14% Similarity=0.116 Sum_probs=90.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.++.++.+++.. .+-.++|++||..... ..| ....|+.||+..+.+.+.
T Consensus 108 e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----------~~~------~~~~Y~asKaal~~lt~~ 171 (259)
T d2ae2a_ 108 EDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL----------AVP------YEAVYGATKGAMDQLTRC 171 (259)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----------CCT------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc----------ccc------cccchHHHHHHHHHHHHH
Confidence 46778999999999998888754 4456899999977421 111 147899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC-----CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE-----RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~-----~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
..... .+.|+++.+|-|+.|--+..+ ......++.+...-+.- -+...+|+|+++..++..
T Consensus 172 lA~el----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~pedvA~~v~fL~S~- 237 (259)
T d2ae2a_ 172 LAFEW----AKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------RMGEPKELAAMVAFLCFP- 237 (259)
T ss_dssp HHHHT----GGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHHSG-
T ss_pred HHHHh----CcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCc-
Confidence 65321 236899999999988532110 00112233333322221 245689999999887641
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|-
T Consensus 238 --------~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 238 --------AASYVTGQIIYVDGGL 253 (259)
T ss_dssp --------GGTTCCSCEEEESTTG
T ss_pred --------hhCCCcCcEEEECCCe
Confidence 1345689998887763
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.0015 Score=57.26 Aligned_cols=138 Identities=13% Similarity=0.130 Sum_probs=89.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.++.++.+++... +-.++|.+||..+..+ .| ....|+.||+..+.+.+..
T Consensus 102 ~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~l 165 (250)
T d1ydea1 102 QGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----------QA------QAVPYVATKGAVTAMTKAL 165 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----------CT------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc----------cc------CcchhHHHHhhHHHHHHHH
Confidence 456788999999999999988643 2258999999875321 11 1468999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCC------CCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPG------EERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~------~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
..+. .+.|+++..|.|+.|--|- ........++......+. .-+...+|+++++..++..
T Consensus 166 A~e~----a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~eva~~v~fL~Sd- 231 (250)
T d1ydea1 166 ALDE----SPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRMGQPAEVGAAAVFLASE- 231 (250)
T ss_dssp HHHH----GGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSCBCHHHHHHHHHHHHHH-
T ss_pred HHHh----cccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhCc-
Confidence 5321 2368999999999884220 000011222222222111 1256789999999877641
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
..-..|+.+.+.+|..+
T Consensus 232 ---------a~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 232 ---------ANFCTGIELLVTGGAEL 248 (250)
T ss_dssp ---------CTTCCSCEEEESTTTTS
T ss_pred ---------cCCCcCCeEEECCCccc
Confidence 33568999988887544
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=96.89 E-value=0.0015 Score=57.48 Aligned_cols=145 Identities=15% Similarity=0.112 Sum_probs=90.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----c-CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----F-GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~-gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++.. . +-.++|++||..+..+ .| ....|+.||+..+.+.+
T Consensus 101 ~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~ 164 (256)
T d1k2wa_ 101 ESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG----------EA------LVGVYCATKAAVISLTQ 164 (256)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc----------cc------cccchhhhhhHHHHHHH
Confidence 46778899999999999987643 2 2458999999875211 11 14789999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHc--CCCcc----eecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKL--GLVPF----KIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~--g~~~~----~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...... .+.|+++..+-|+.|-.|. ...+...... +.... .+.......-+...+|+|.++..++.
T Consensus 165 ~lA~el----~~~gIrVN~V~PG~i~T~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S 236 (256)
T d1k2wa_ 165 SAGLNL----IRHGINVNAIAPGVVDGEH----WDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT 236 (256)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBCCTT----HHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred HHHHHh----cccCeEEEEEecCCCCchh----hhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 765321 2368999999998775442 2222211110 00000 00000001125668999999988763
Q ss_pred cccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 156 GLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 156 ~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
. ...-..|+.+.+.+|..+|
T Consensus 237 ~---------~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 237 P---------EADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp G---------GGTTCCSCEEEESTTSSCC
T ss_pred c---------hhCCccCceEEECcchhhC
Confidence 1 1345689999998887654
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.86 E-value=0.0017 Score=57.41 Aligned_cols=138 Identities=13% Similarity=0.120 Sum_probs=89.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCC-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvk-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++.+++.. .+-. ++|.+||..... ..| ....|+.||+..+.+.+
T Consensus 107 ~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~----------~~~------~~~~Y~asKaal~~lt~ 170 (261)
T d1geea_ 107 SDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI----------PWP------LFVHYAASKGGMKLMTE 170 (261)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------CCT------TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc----------cCc------cccccccCCccchhhHH
Confidence 46778899999999888887753 3443 588999976411 111 14689999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH--HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL--PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~--~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... .+.|+++.+|-|+.|--|...... +.....+.+..+.- -+...+|+|+++..++..
T Consensus 171 ~lA~e~----~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~S~--- 234 (261)
T d1geea_ 171 TLALEY----APKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG---------YIGEPEEIAAVAAWLASS--- 234 (261)
T ss_dssp HHHHHH----GGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS---------SCBCHHHHHHHHHHHHSG---
T ss_pred HHHHHh----hhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC---------CCCCHHHHHHHHHHHhCc---
Confidence 764321 236899999999988643221100 12222233222211 245689999999887741
Q ss_pred CCCCCCCCCCCCCceEEEeCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+.+.+.+|..
T Consensus 235 ------~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 235 ------EASYVTGITLFADGGMT 251 (261)
T ss_dssp ------GGTTCCSCEEEESTTGG
T ss_pred ------hhcCCcCCeEEECCCee
Confidence 13456899998888754
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.81 E-value=0.0021 Score=56.52 Aligned_cols=138 Identities=17% Similarity=0.096 Sum_probs=89.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++-++++++..+ .-.+.+.++|..+...+ .| ....|+.||+..+.+.+...
T Consensus 106 ~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~---------~~------~~~~Y~asK~al~~l~r~lA 170 (259)
T d1ja9a_ 106 ELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG---------IP------NHALYAGSKAAVEGFCRAFA 170 (259)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS---------CC------SCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC---------CC------CchhHHHHHHHHHHHHHHHH
Confidence 466788999999999999999875 22467777665432211 11 14689999999998888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecC-------------CCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGP-------------GEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp-------------~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
... ...|+++.+|.|+.|--+ ........+.+.+.+..+.. -+...+|++++++
T Consensus 171 ~e~----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---------R~g~p~eVa~~v~ 237 (259)
T d1ja9a_ 171 VDC----GAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---------RIGYPADIGRAVS 237 (259)
T ss_dssp HHH----GGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---------SCBCHHHHHHHHH
T ss_pred HHH----hhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---------CCcCHHHHHHHHH
Confidence 321 236899999999988421 00111233444444443221 2567899999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.++.. ...-..|+.+.+.+|.
T Consensus 238 fL~S~---------~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 238 ALCQE---------ESEWINGQVIKLTGGG 258 (259)
T ss_dssp HHHSG---------GGTTCCSCEEEESTTC
T ss_pred HHhCc---------hhcCCcCceEEeCCCC
Confidence 88852 1334689988877664
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.79 E-value=0.0028 Score=55.23 Aligned_cols=136 Identities=16% Similarity=0.116 Sum_probs=89.6
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++.++.+++.. .+-.++|.+||.....+ .| ....|+.||+..+.+.+
T Consensus 98 ~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~ 161 (244)
T d1pr9a_ 98 EAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA----------VT------NHSVYCSTKGALDMLTK 161 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------CT------TBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc----------cc------chhhhhhhHHHHHHHHH
Confidence 46778899999999988887654 23468999999875211 11 14689999999998888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... .+.|+++..+.|+.|.-+.... .-+...+.+....+. .-+...+|+|+++..++..
T Consensus 162 ~lA~el----~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peevA~~v~fL~S~--- 225 (244)
T d1pr9a_ 162 VMALEL----GPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL---------GKFAEVEHVVNAILFLLSD--- 225 (244)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTT---------CSCBCHHHHHHHHHHHHSG---
T ss_pred HHHHHh----CCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc---
Confidence 764321 2368999999999886441111 112233333333221 1256789999999877741
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 226 ------~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 226 ------RSGMTTGSTLPVEGG 240 (244)
T ss_dssp ------GGTTCCSCEEEESTT
T ss_pred ------hhCCcCCcEEEECcc
Confidence 134568998887766
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0016 Score=56.83 Aligned_cols=138 Identities=10% Similarity=0.101 Sum_probs=92.0
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++..+.+++.. .+-.++|.+||.... ..+... ...|+.+|+..+.+++.
T Consensus 96 ~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~-----------~~~~~~----~~~Y~~sKaal~~l~r~ 160 (245)
T d2ag5a1 96 KDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS-----------VKGVVN----RCVYSTTKAAVIGLTKS 160 (245)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT-----------TBCCTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc-----------cCCccc----hhHHHHHHHHHHHHHHH
Confidence 46778899999999999888764 345689999986531 111111 47899999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
.+... ...|+++.+|.|+.|-.|... .......+.+...-+. .-+...+|+++++..++..
T Consensus 161 lA~e~----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedva~~v~fL~s~ 227 (245)
T d2ag5a1 161 VAADF----IQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAEEIAMLCVYLASD 227 (245)
T ss_dssp HHHHH----GGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHHHHHHHHHHHHSG
T ss_pred HHHHh----hhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCh
Confidence 65321 236899999999988654211 1112233333332221 1266789999999988741
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|.
T Consensus 228 ---------~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 228 ---------ESAYVTGNPVIIDGGW 243 (245)
T ss_dssp ---------GGTTCCSCEEEECTTG
T ss_pred ---------hhCCCcCceEEeCCCc
Confidence 1345689998887774
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.76 E-value=0.0015 Score=57.33 Aligned_cols=137 Identities=11% Similarity=-0.003 Sum_probs=88.1
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+...++|+.++..+.+++...- -.++|++||..+..+ .| ....|+.||+..+.+.+....
T Consensus 113 ~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~ltr~lA~ 176 (256)
T d1ulua_ 113 DWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV----------VP------KYNVMAIAKAALEASVRYLAY 176 (256)
T ss_dssp HHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB----------CT------TCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC----------CC------CchHHHHHHHHHHHHHHHHHH
Confidence 455688999999999999886541 247999999775211 11 147899999999988887653
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. .+.|+++.++.|+.|.-+.... ......+.+.+.-+.- -+...+|+|+++..++..
T Consensus 177 el----a~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pedvA~~v~fL~S~------- 236 (256)
T d1ulua_ 177 EL----GPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR---------RNITQEEVGNLGLFLLSP------- 236 (256)
T ss_dssp HH----GGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS---------SCCCHHHHHHHHHHHHSG-------
T ss_pred Hh----cccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCc-------
Confidence 21 2368999999999987654332 1234444444332221 145689999999887741
Q ss_pred CCCCCCCCCceEEEeCCCC
Q 016468 164 QKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+.+.+.+|..
T Consensus 237 --~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 237 --LASGITGEVVYVDAGYH 253 (256)
T ss_dssp --GGTTCCSCEEEESTTGG
T ss_pred --hhCCccCCeEEECcCEe
Confidence 03346899998877754
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=96.75 E-value=0.0018 Score=57.15 Aligned_cols=136 Identities=16% Similarity=0.131 Sum_probs=88.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++.. .+-.++|++||..+..+ .| ....|+.||+..+.+.+.
T Consensus 105 ~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~----------~~------~~~~Y~asKaal~~ltk~ 168 (260)
T d1zema1 105 DDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG----------PP------NMAAYGTSKGAIIALTET 168 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC----------CT------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC----------Cc------chHHHHHHHHHHHHHHHH
Confidence 46778899999999999888754 35569999999875221 11 136899999999988877
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCC---------------CCCC-HHHHHHHHHcCCCcceecCCCccccceeHHHH
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPG---------------EERH-LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNL 146 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~---------------~~~~-~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDl 146 (389)
..... .+.|+++..+-|+.|--+- .... -..+.+.+....+.- -+...+|+
T Consensus 169 lA~el----~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pedv 235 (260)
T d1zema1 169 AALDL----APYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR---------RYGDINEI 235 (260)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS---------SCBCGGGS
T ss_pred HHHHh----hhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC---------CCcCHHHH
Confidence 64321 2368999999999885331 0011 122333333332221 14567889
Q ss_pred HHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCC
Q 016468 147 VLALILASMGLLDDIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 147 a~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~ 180 (389)
+.++..++.. ...-..|+.+.+.+|
T Consensus 236 A~~v~fL~S~---------~s~~itG~~i~VDGG 260 (260)
T d1zema1 236 PGVVAFLLGD---------DSSFMTGVNLPIAGG 260 (260)
T ss_dssp HHHHHHHHSG---------GGTTCCSCEEEESCC
T ss_pred HHHHHHHhCc---------hhcCccCCeEEeCCC
Confidence 9998877741 134567888877654
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.68 E-value=0.0019 Score=56.69 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=86.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCC-eEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQ-RLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvk-rlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++.. .+-. ++|.+||.....+ .| ....|+.||+..+.+.+
T Consensus 104 ~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~ 167 (251)
T d1zk4a1 104 AEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG----------DP------SLGAYNASKGAVRIMSK 167 (251)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHH
T ss_pred cchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc----------CC------CchhHHHHHHHHhcchH
Confidence 45677999999999999998764 3433 7899999774211 11 14689999999998777
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
....+. .-.+.|+++..|-|+.|--+..+... +.-. ...... ....-+...+|+++++..++..
T Consensus 168 ~lA~e~--~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~---~~~~~~------~pl~R~~~pedvA~~v~fL~S~---- 232 (251)
T d1zk4a1 168 SAALDC--ALKDYDVRVNTVHPGYIKTPLVDDLPGAEEA---MSQRTK------TPMGHIGEPNDIAYICVYLASN---- 232 (251)
T ss_dssp HHHHHH--HHTTCSEEEEEEEECCBCCHHHHTSTTHHHH---HTSTTT------CTTSSCBCHHHHHHHHHHHHSG----
T ss_pred HHHHHH--hcCCCcEEEEEEeCCCCCChhHHhcCCHHHH---HHHHhC------CCCCCCcCHHHHHHHHHHHhCc----
Confidence 543110 00237899999999988543111110 1111 111100 0111256789999999887741
Q ss_pred CCCCCCCCCCCCceEEEeCC
Q 016468 161 IPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 233 -----~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 233 -----ESKFATGSEFVVDGG 247 (251)
T ss_dssp -----GGTTCCSCEEEESTT
T ss_pred -----hhCCCcCcEEEECcc
Confidence 134567999888776
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.68 E-value=0.0024 Score=55.28 Aligned_cols=136 Identities=10% Similarity=0.068 Sum_probs=88.5
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.++.++.+++. +.+-.++|.+||... ..+ ... ...|+.||+..+.+.+.
T Consensus 88 ~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~-~~~-----------~~~----~~~Y~asKaal~~ltk~ 151 (234)
T d1o5ia_ 88 EDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV-ISP-----------IEN----LYTSNSARMALTGFLKT 151 (234)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TSC-----------CTT----BHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhhhhhhhhhcccccccccccccccccccccc-ccc-----------ccc----cccchhHHHHHHHHHHH
Confidence 4567788999999888887774 445668999999764 111 111 46899999999987776
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH-HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL-PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~-~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
...+. .+.|+++.++.|+.+--+...... ....+.+.+..+. .-+...+|++.++..++..
T Consensus 152 lA~el----a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl---------~R~~~pediA~~v~fL~S~----- 213 (234)
T d1o5ia_ 152 LSFEV----APYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM---------RRMAKPEEIASVVAFLCSE----- 213 (234)
T ss_dssp HHHHH----GGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT---------SSCBCHHHHHHHHHHHHSG-----
T ss_pred HHHHh----cccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCh-----
Confidence 64311 236899999999988544221111 1222333332221 1256789999999887641
Q ss_pred CCCCCCCCCCCceEEEeCC
Q 016468 162 PGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+++.+.+|
T Consensus 214 ----~s~~itG~~i~vDGG 228 (234)
T d1o5ia_ 214 ----KASYLTGQTIVVDGG 228 (234)
T ss_dssp ----GGTTCCSCEEEESTT
T ss_pred ----hhcCCcCcEEEECcc
Confidence 134567999988776
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.63 E-value=0.0013 Score=57.40 Aligned_cols=136 Identities=16% Similarity=0.152 Sum_probs=88.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc-----CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF-----GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~-----gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.++..+.+++... +-.++|.+||... +. ..| ....|+.||+..+.+.+
T Consensus 96 ~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~-~~---------~~~------~~~~Y~asKaal~~lt~ 159 (242)
T d1cyda_ 96 EAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA-HV---------TFP------NLITYSSTKGAMTMLTK 159 (242)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TS---------CCT------TBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhc-cc---------cCC------ccccccchHHHHHHHHH
Confidence 457788999999999998876532 3458999999774 11 111 14689999999999888
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCC--CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEE--RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~--~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
...... .+.|+++.++-|+.|--+-.. ..-+.....+....+. .-+...+|+++++..++..
T Consensus 160 ~lA~e~----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~peeva~~v~fL~S~--- 223 (242)
T d1cyda_ 160 AMAMEL----GPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---------RKFAEVEDVVNSILFLLSD--- 223 (242)
T ss_dssp HHHHHH----GGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT---------SSCBCHHHHHHHHHHHHSG---
T ss_pred HHHHHh----CccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc---
Confidence 764321 236899999999988533110 0012333333332221 1256789999999887641
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+.+.+|
T Consensus 224 ------~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 224 ------RSASTSGGGILVDAG 238 (242)
T ss_dssp ------GGTTCCSSEEEESTT
T ss_pred ------hhcCcCCceEEeCcc
Confidence 134568999888766
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.53 E-value=0.0034 Score=55.25 Aligned_cols=140 Identities=9% Similarity=0.057 Sum_probs=84.4
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.++.++.+++... +-.++|.++|..+... ..| ....|+.||+..+.+.+..
T Consensus 111 e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~---------~~~------~~~~Y~asKaal~~lt~~l 175 (264)
T d1spxa_ 111 ESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------ATP------DFPYYSIAKAAIDQYTRNT 175 (264)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS---------CCT------TSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc---------cCC------CchhhhhhhhhHHHHHHHH
Confidence 356788999999999998888653 2246666666542111 111 1367999999999888876
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC---------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE---------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~---------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
.... .+.|+++..+.|+.|--+... .........+...-+.- -+...+|+|+++..++
T Consensus 176 A~el----~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pedvA~~v~fL~ 242 (264)
T d1spxa_ 176 AIDL----IQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG---------VMGQPQDIAEVIAFLA 242 (264)
T ss_dssp HHHH----GGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS---------SCBCHHHHHHHHHHHH
T ss_pred HHHh----cccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence 4321 236899999999988543211 11112222222222111 1456899999998776
Q ss_pred hcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 155 MGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 155 ~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
..- ...-..|+.+.+.+|..
T Consensus 243 S~~--------~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 243 DRK--------TSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp CHH--------HHTTCCSCEEEESTTGG
T ss_pred CCc--------ccCCccCceEEeCCChh
Confidence 310 02236899998877743
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.45 E-value=0.0058 Score=53.21 Aligned_cols=136 Identities=13% Similarity=0.125 Sum_probs=89.8
Q ss_pred chhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCC
Q 016468 9 FGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGR 86 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~ 86 (389)
......+|+.+...+.+++... +-+.+|++||..+.. ..| . ...|+.||+.-+.+++.....
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~----------~~~--~----~~~Y~~sKaal~~ltr~lA~e 175 (258)
T d1qsga_ 112 FKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------AIP--N----YNVMGLAKASLEANVRYMANA 175 (258)
T ss_dssp HHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------BCT--T----TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc----------CCC--C----cHHHHHHHHHHHHHHHHHHHH
Confidence 4556778888888888888764 234688889876421 111 1 468999999999888876532
Q ss_pred CCCCCCCCCceEEEEecCceecCCCCC--CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 87 PFKKNNRKCLYTCAVRPAAIYGPGEER--HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 87 ~~~~~~~~gl~~~ilRp~~IyGp~~~~--~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
. ...|+++.+|.|+.|.-+.... .-...........+.- -+...+|++.++..++...
T Consensus 176 l----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~---------R~~~peeia~~v~fL~s~~------- 235 (258)
T d1qsga_ 176 M----GPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR---------RTVTIEDVGNSAAFLCSDL------- 235 (258)
T ss_dssp H----TTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS---------SCCCHHHHHHHHHHHTSGG-------
T ss_pred h----CccCceeecccccccccccccccchhhhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhCch-------
Confidence 1 3478999999999997654332 1233333333222211 1566899999998887411
Q ss_pred CCCCCCCCceEEEeCCCC
Q 016468 165 KGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~ 182 (389)
..-..|+++.+.+|-.
T Consensus 236 --s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 236 --SAGISGEVVHVDGGFS 251 (258)
T ss_dssp --GTTCCSCEEEESTTGG
T ss_pred --hcCccCceEEECcCHH
Confidence 3457899998887754
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.45 E-value=0.0019 Score=56.72 Aligned_cols=137 Identities=14% Similarity=0.101 Sum_probs=87.6
Q ss_pred ccCcchhhhHhhhhHHHHHHHHHHHc-------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHH
Q 016468 5 EMLQFGRVDEVNINGTCHVIEACLEF-------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAE 77 (389)
Q Consensus 5 ~~~~~~~~~~vNv~gt~nll~aa~~~-------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE 77 (389)
+..+.+..+++|+.|+-++.+++... +..++|++||..+..+ .+ ....|+.||+...
T Consensus 96 ~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~----------~~------~~~~Y~asKaal~ 159 (254)
T d1sbya1 96 DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA----------IH------QVPVYSASKAAVV 159 (254)
T ss_dssp CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----------CT------TSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----------CC------CCHHHHHHHHHHH
Confidence 35677889999999999999988753 2357999999875221 11 1468999999999
Q ss_pred HHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCC-cceecCCCccccceeHHHHHHHHHHHHhc
Q 016468 78 QLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLV-PFKIGEPSVKTDWIYVDNLVLALILASMG 156 (389)
Q Consensus 78 ~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~-~~~~g~~~~~~~~v~vdDla~a~~~a~~~ 156 (389)
.+.+.+.... ...|+++..|-|+.|.-+ +.+....... ................++++++++.+++.
T Consensus 160 ~~t~~la~el----~~~gIrVn~I~PG~v~T~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~ 227 (254)
T d1sbya1 160 SFTNSLAKLA----PITGVTAYSINPGITRTP--------LVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA 227 (254)
T ss_dssp HHHHHHHHHH----HHHSEEEEEEEECSEESH--------HHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhc----cccCeEEEEEEeCCCcCc--------cccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC
Confidence 8887765311 235899999999999753 1111000000 00000000011234689999999988862
Q ss_pred ccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 157 LLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 157 l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
. ..|+++.+.+|.
T Consensus 228 -----------~-~tG~vi~vdgG~ 240 (254)
T d1sbya1 228 -----------N-KNGAIWKLDLGT 240 (254)
T ss_dssp -----------C-CTTCEEEEETTE
T ss_pred -----------C-CCCCEEEECCCE
Confidence 2 378898887774
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.39 E-value=0.0066 Score=52.61 Aligned_cols=112 Identities=15% Similarity=0.198 Sum_probs=77.5
Q ss_pred cCcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
..+.+..+++|+.|+-++.+++.. .+-.++|.+||..+..+ .| ....|+.||+..+.+.+
T Consensus 106 ~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------~~------~~~~Y~asK~al~~lt~ 169 (240)
T d2bd0a1 106 EEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA----------FR------HSSIYCMSKFGQRGLVE 169 (240)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------CT------TCHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC----------CC------CChHHHHHHHHHHHHHH
Confidence 356788999999999998888864 45568999999875211 11 14689999998888777
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
..... ..+.|+++..+.|+.|--+-.... +.+....+...+|+|++++.++.
T Consensus 170 ~la~e----l~~~gIrvn~i~PG~v~T~~~~~~------------------~~~~~~~~~~PedvA~~v~~l~s 221 (240)
T d2bd0a1 170 TMRLY----ARKCNVRITDVQPGAVYTPMWGKV------------------DDEMQALMMMPEDIAAPVVQAYL 221 (240)
T ss_dssp HHHHH----HTTTTEEEEEEEECCBCSTTTCCC------------------CSTTGGGSBCHHHHHHHHHHHHT
T ss_pred HHHHH----hCcCCeEEEEeeeCcccCchhhhc------------------CHhhHhcCCCHHHHHHHHHHHHc
Confidence 65421 134789999999998854321110 01112235567999999999885
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.37 E-value=0.0032 Score=55.35 Aligned_cols=144 Identities=15% Similarity=0.091 Sum_probs=89.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----c-CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----F-GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVL 81 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~-gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~ 81 (389)
.+.+..+++|+.|+.++.+++.. . +-.+++..||... +....... ... .....|+.||+..+.+.+
T Consensus 109 ~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~-~~~~~~~~--~~~------~~~~~Y~asKaal~~lt~ 179 (260)
T d1h5qa_ 109 EDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS-QIINQSSL--NGS------LTQVFYNSSKAACSNLVK 179 (260)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TSCCEEET--TEE------CSCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhhhhhcccccccccceEEEEeecccc-cccccccc--ccC------ccccchhhhhhhHHHHHH
Confidence 45678899999999888887643 2 3345666666542 22111000 000 114689999999998887
Q ss_pred HhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCC
Q 016468 82 KSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDI 161 (389)
Q Consensus 82 ~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~ 161 (389)
...... .+.|+++.++-|+.|--+......+...+......+.-. +...+|+|+++..++..
T Consensus 180 ~lA~el----~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R---------~g~pedvA~~v~fL~S~----- 241 (260)
T d1h5qa_ 180 GLAAEW----ASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNR---------FAQPEEMTGQAILLLSD----- 241 (260)
T ss_dssp HHHHHH----GGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSS---------CBCGGGGHHHHHHHHSG-----
T ss_pred HHHHHh----chhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHhcc-----
Confidence 764211 236899999999998644333333445555544433222 45578899988877631
Q ss_pred CCCCCCCCCCCceEEEeCCC
Q 016468 162 PGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 162 ~~~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+.+.+.+|.
T Consensus 242 ----~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 242 ----HATYMTGGEYFIDGGQ 257 (260)
T ss_dssp ----GGTTCCSCEEEECTTG
T ss_pred ----hhCCCcCceEEECCCe
Confidence 0334679999887775
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.29 E-value=0.0078 Score=52.58 Aligned_cols=139 Identities=11% Similarity=0.136 Sum_probs=85.7
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
.+.+..+++|+.++.++.+++... +-.++|++||..+..+ .+ ....|+.||+..+.+.+..
T Consensus 102 ~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~lt~~l 165 (253)
T d1hxha_ 102 EDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP----------IE------QYAGYSASKAAVSALTRAA 165 (253)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC----------CT------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC----------cc------ccccccchhHHHHHHHHHH
Confidence 457889999999999988888653 2268999999875211 11 1468999999999888765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHH-cCCCcceec--CCCc-cccceeHHHHHHHHHHHHhcccC
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAK-LGLVPFKIG--EPSV-KTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~-~g~~~~~~g--~~~~-~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
....-+ ++.++++..+-|+.|--+ +.+... .+....... .+.. .-.+...+|+|++++.++..
T Consensus 166 A~e~~~--~g~~IrVN~I~PG~i~T~--------~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~--- 232 (253)
T d1hxha_ 166 ALSCRK--QGYAIRVNSIHPDGIYTP--------MMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASD--- 232 (253)
T ss_dssp HHHHHH--HTCCEEEEEEEESEECCH--------HHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSG---
T ss_pred HHHHhh--cCCCEEEEEEeECCCcCH--------hHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhCh---
Confidence 421000 124699999999988532 111111 000000000 0000 11366789999999887741
Q ss_pred CCCCCCCCCCCCCceEEEeCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDG 180 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~ 180 (389)
...-..|+.+++.+|
T Consensus 233 ------~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 233 ------ESSVMSGSELHADNS 247 (253)
T ss_dssp ------GGTTCCSCEEEESSS
T ss_pred ------hhCCCcCcEEEECcc
Confidence 134568999888665
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=96.23 E-value=0.0047 Score=53.62 Aligned_cols=137 Identities=16% Similarity=0.040 Sum_probs=90.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++.+++...- -+.++.+||... . ..| ....|+.+|+..|.+.+..+
T Consensus 101 ~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~-~----------~~~------~~~~Y~~sK~al~~lt~~lA 163 (241)
T d2a4ka1 101 EAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG-L----------GAF------GLAHYAAGKLGVVGLARTLA 163 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT-C----------CHH------HHHHHHHCSSHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccceeecccccc-c----------ccc------CccccchhhHHHHHHHHHHH
Confidence 4567889999999999999987652 334555554331 1 111 13679999999999988775
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCC
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQ 164 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~ 164 (389)
.+. ...|+++.++-|+.|=.+......+...+...+..+.. -+...+|+++++..++...
T Consensus 164 ~el----~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~---------r~~~p~dva~~v~fL~S~~------- 223 (241)
T d2a4ka1 164 LEL----ARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLG---------RAGRPEEVAQAALFLLSEE------- 223 (241)
T ss_dssp HHH----TTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTC---------SCBCHHHHHHHHHHHHSGG-------
T ss_pred HHH----hHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhcch-------
Confidence 321 34689999999998844322223344444444433221 2567899999998887411
Q ss_pred CCCCCCCCceEEEeCCCC
Q 016468 165 KGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 165 ~~~~~~~g~~y~i~~~~~ 182 (389)
..-..|+.+.+.+|..
T Consensus 224 --s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 224 --SAYITGQALYVDGGRS 239 (241)
T ss_dssp --GTTCCSCEEEESTTTT
T ss_pred --hCCCcCceEEeCCCcc
Confidence 3456899988887754
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.16 E-value=0.0035 Score=56.32 Aligned_cols=137 Identities=13% Similarity=0.050 Sum_probs=88.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.++.++.+++.. .+-.++|.+||... . ..| ....|+.||+..+.+.+.
T Consensus 116 e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~----------~~~------~~~~Y~asKaal~~ltk~ 178 (297)
T d1yxma1 116 KGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-A----------GFP------LAVHSGAARAGVYNLTKS 178 (297)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-T----------CCT------TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-c----------ccc------ccccchhHHHHHHHHHHH
Confidence 46778999999999999988864 34457887776431 1 111 147899999999988887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCH----HHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHL----PRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~----~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
..... ...|+++.+|.|+.|.-+...... ....+......+. .-+...+|+|.+++.++..
T Consensus 179 lA~el----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl---------gR~g~pedvA~~v~fL~Sd-- 243 (297)
T d1yxma1 179 LALEW----ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA---------KRIGVPEEVSSVVCFLLSP-- 243 (297)
T ss_dssp HHHHT----GGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT---------SSCBCTHHHHHHHHHHHSG--
T ss_pred HHHHh----cccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc--
Confidence 65321 236899999999998654321111 1111111111111 1255689999999888741
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+++.+.+|..
T Consensus 244 -------~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 244 -------AASFITGQSVDVDGGRS 260 (297)
T ss_dssp -------GGTTCCSCEEEESTTGG
T ss_pred -------hhcCcCCcEEEeCcChh
Confidence 14456899998888753
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.03 E-value=0.0098 Score=51.20 Aligned_cols=126 Identities=16% Similarity=0.100 Sum_probs=86.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+.+..+++|+.++.++.+++..+ +-.++|++||..+. . ..|. ...|+.||+..+.+.+....
T Consensus 95 ~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~-~---------~~~~------~~~Y~asKaal~~lt~~la~ 158 (236)
T d1dhra_ 95 NCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL-D---------GTPG------MIGYGMAKGAVHQLCQSLAG 158 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG-S---------CCTT------BHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc-C---------CccC------CcccHHHHHHHHHHHHHHHH
Confidence 45678899999999999998764 23589999998752 1 1111 46899999999999999864
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
.. . +.+.|+++..+.|+.|.-| +.+..... ...-.++..+|+++.+..++..
T Consensus 159 El-~-~~~~gI~vn~v~PG~v~T~--------~~~~~~~~---------~~~~~~~~pe~va~~~~~l~s~--------- 210 (236)
T d1dhra_ 159 KN-S-GMPSGAAAIAVLPVTLDTP--------MNRKSMPE---------ADFSSWTPLEFLVETFHDWITG--------- 210 (236)
T ss_dssp TT-S-SCCTTCEEEEEEESCEECH--------HHHHHSTT---------SCGGGSEEHHHHHHHHHHHHTT---------
T ss_pred Hh-c-cCCCcEEEEEEEeccCcCC--------cchhhCcc---------chhhcCCCHHHHHHHHHHHhCC---------
Confidence 31 1 0136899999999988632 22221111 1123578899999999988862
Q ss_pred CCCCCCCceEEE
Q 016468 166 GRPIASGQPYFV 177 (389)
Q Consensus 166 ~~~~~~g~~y~i 177 (389)
.....+|+.+.+
T Consensus 211 ~~~~i~G~~i~v 222 (236)
T d1dhra_ 211 NKRPNSGSLIQV 222 (236)
T ss_dssp TTCCCTTCEEEE
T ss_pred CccCCCCCeEEE
Confidence 133457877765
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.99 E-value=0.022 Score=50.00 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=87.2
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.+..+++|+.++.++.+++... .-.+.+.++|..... . +.. ....|+.||+..+.+.+...
T Consensus 118 ~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~----------~-~~~----~~~~Y~asKaal~~ltk~lA 182 (272)
T d1g0oa_ 118 EEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA----------K-AVP----KHAVYSGSKGAIETFARCMA 182 (272)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC----------S-SCS----SCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhhccceeeeecccccccccccccccccccccccc----------c-ccc----chhhHHHHHHHHHHHHHHHH
Confidence 456778899999999999999875 234788887754311 1 111 14679999999998887654
Q ss_pred CCCCCCCCCCCceEEEEecCceecCC-----------CCCC-HHHHHHH-HHcCCCcceecCCCccccceeHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPG-----------EERH-LPRIVSL-AKLGLVPFKIGEPSVKTDWIYVDNLVLALI 151 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~-----------~~~~-~~~li~~-~~~g~~~~~~g~~~~~~~~v~vdDla~a~~ 151 (389)
.+. ...|+++.+|.|+.|--+- .... -...... .....+. --+...+|+|.++.
T Consensus 183 ~e~----~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl---------gR~~~peevA~~v~ 249 (272)
T d1g0oa_ 183 IDM----ADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL---------RRVGLPIDIARVVC 249 (272)
T ss_dssp HHH----GGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT---------CSCBCHHHHHHHHH
T ss_pred HHh----chhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC---------CCCcCHHHHHHHHH
Confidence 321 2368999999999884220 0011 1111111 1111111 12577899999999
Q ss_pred HHHhcccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 152 LASMGLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 152 ~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
.++... ..-..|+.+.+.+|.
T Consensus 250 fL~s~~---------s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 250 FLASND---------GGWVTGKVIGIDGGA 270 (272)
T ss_dssp HHHSGG---------GTTCCSCEEEESTTC
T ss_pred HHhCch---------hcCccCceEeECCCC
Confidence 887511 344689998888775
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.0025 Score=56.88 Aligned_cols=81 Identities=22% Similarity=0.197 Sum_probs=60.8
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+..+++|+.|+.++.+++. +.+-.++|++||..+..+ .| ....|+.||+..+.+.+.
T Consensus 105 e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~----------~~------~~~~Y~asKaal~~l~~~ 168 (285)
T d1jtva_ 105 DAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG----------LP------FNDVYCASKFALEGLCES 168 (285)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC----------CT------TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC----------CC------CchHHHHHHHHHHHHHHH
Confidence 4667889999999998888874 456679999999875221 11 146899999999988777
Q ss_pred hCCCCCCCCCCCCceEEEEecCcee
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIY 107 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~Iy 107 (389)
..... .+.|+++.++.|+.|-
T Consensus 169 la~El----~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 169 LAVLL----LPFGVHLSLIECGPVH 189 (285)
T ss_dssp HHHHH----GGGTEEEEEEEECCBC
T ss_pred HHHHh----hccCcEEEEEecCCCC
Confidence 64311 2368999999999884
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.72 E-value=0.013 Score=51.79 Aligned_cols=141 Identities=9% Similarity=-0.042 Sum_probs=86.4
Q ss_pred cchhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHh
Q 016468 8 QFGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKS 83 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~ 83 (389)
+.+..+++|+.++.++.+++.. .+-.+++.+||.... . ..+ ....|+.||+..+.+.+..
T Consensus 109 ~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~-~---------~~~------~~~~Y~asKaal~~ltk~l 172 (274)
T d1xhla_ 109 LYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP-Q---------AHS------GYPYYACAKAALDQYTRCT 172 (274)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS-S---------CCT------TSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccccccccccccccccccccccccchhhhhcc-c---------cCC------CCceehhhhhHHHHHHHHH
Confidence 5678899999999999888864 344577777775531 1 111 1468999999999888765
Q ss_pred CCCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 84 NGRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 84 ~~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.... .+.|+++..|-|+.|--|-.. ..-............. ++ ..-+...+|+|.+++.++..-
T Consensus 173 A~el----a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~-iP-----lgR~g~pediA~~v~fL~S~d 242 (274)
T d1xhla_ 173 AIDL----IQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC-IP-----VGHCGKPEEIANIIVFLADRN 242 (274)
T ss_dssp HHHH----GGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT-CT-----TSSCBCHHHHHHHHHHHHCHH
T ss_pred HHHH----hHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcC-CC-----CCCCcCHHHHHHHHHHHcCCc
Confidence 4211 236899999999998543110 0011112222211110 00 112567899999998776300
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+.+.+.+|..
T Consensus 243 --------~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 243 --------LSSYIIGQSIVADGGST 259 (274)
T ss_dssp --------HHTTCCSCEEEESTTGG
T ss_pred --------cccCccCcEEEeCcCHH
Confidence 02346899998888753
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=95.72 E-value=0.025 Score=48.35 Aligned_cols=128 Identities=9% Similarity=0.013 Sum_probs=83.9
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
..+..+++|+.++.++.+++... +-.++|++||..+..+ .| ....|+.||+..+.+.+.+..
T Consensus 95 ~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~l~~~la~ 158 (235)
T d1ooea_ 95 NADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP----------TP------SMIGYGMAKAAVHHLTSSLAA 158 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------CT------TBHHHHHHHHHHHHHHHHHHS
T ss_pred HHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCC----------cc------cccchHHHHHHHHHHHHHHHH
Confidence 45667899999999999998775 2258999999875211 11 147899999999999998754
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPGQK 165 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~~~ 165 (389)
+.- +.+.++.+..+.|+.+- + .+.+....+ .....++..+|+++.++..+....
T Consensus 159 e~~--~~~~~i~v~~i~Pg~~~----T----~~~~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~------- 212 (235)
T d1ooea_ 159 KDS--GLPDNSAVLTIMPVTLD----T----PMNRKWMPN---------ADHSSWTPLSFISEHLLKWTTETS------- 212 (235)
T ss_dssp TTS--SCCTTCEEEEEEESCBC----C----HHHHHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGG-------
T ss_pred Hhc--cCCCceEEEEEecCcCc----C----cchhhhCcC---------CccccCCCHHHHHHHHHHHhcCcc-------
Confidence 321 11357889999998773 2 222222211 123457889999998875443110
Q ss_pred CCCCCCCceEEEe
Q 016468 166 GRPIASGQPYFVS 178 (389)
Q Consensus 166 ~~~~~~g~~y~i~ 178 (389)
.....|+.+.+.
T Consensus 213 -~~~~tG~~i~v~ 224 (235)
T d1ooea_ 213 -SRPSSGALLKIT 224 (235)
T ss_dssp -GCCCTTCEEEEE
T ss_pred -ccCCCceEEEEE
Confidence 234567777763
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=95.58 E-value=0.011 Score=52.31 Aligned_cols=133 Identities=17% Similarity=0.133 Sum_probs=83.0
Q ss_pred chhhhHhhhhHHHHHHHHHHH----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 9 FGRVDEVNINGTCHVIEACLE----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 9 ~~~~~~vNv~gt~nll~aa~~----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.+.++++|+.|+.++.+++.. .+ .++|++||..+..+ .| ....|+.||+..+.+.+...
T Consensus 108 ~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~----------~~------~~~~Y~asKaal~~ltr~lA 170 (276)
T d1bdba_ 108 FDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYP----------NG------GGPLYTAAKHAIVGLVRELA 170 (276)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTST----------TS------SCHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccC----------CC------CCchHHHHHHHHHHHHHHHH
Confidence 678899999999888888743 34 57999998764221 11 14689999999998888765
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCC----------CHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHH
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEER----------HLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILAS 154 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~----------~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~ 154 (389)
... . .++++..|.|+.|--+-... .-..+.+.+....+.-. +...+|++.+++.++
T Consensus 171 ~el----a-~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR---------~g~peeva~~v~fL~ 236 (276)
T d1bdba_ 171 FEL----A-PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR---------MPEVEEYTGAYVFFA 236 (276)
T ss_dssp HHH----T-TTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSS---------CCCGGGGSHHHHHHH
T ss_pred HHh----h-cceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCC---------CcCHHHHHHHHHHHc
Confidence 321 1 34999999999885331110 01122333333322221 445788888877654
Q ss_pred h-cccCCCCCCCCCCCCCCceEEEeCCC
Q 016468 155 M-GLLDDIPGQKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 155 ~-~l~~~~~~~~~~~~~~g~~y~i~~~~ 181 (389)
. .. ..-..|+.+++.+|-
T Consensus 237 S~~~---------a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 237 TRGD---------AAPATGALLNYDGGL 255 (276)
T ss_dssp CHHH---------HTTCSSCEEEESSSG
T ss_pred CCcc---------cCCeeCcEEEECcCh
Confidence 2 10 334679999887773
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.45 E-value=0.019 Score=49.67 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=57.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---------------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---------------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRS 72 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---------------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~S 72 (389)
+.+.++++|+.|+.++.+++... +-.++|.+||.....+ ..+.. ....|+.|
T Consensus 107 ~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~---------~~~~~----~~~~Y~aS 173 (248)
T d1snya_ 107 ELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ---------GNTDG----GMYAYRTS 173 (248)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST---------TCCSC----CCHHHHHH
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC---------CCCCC----ChHHHHHH
Confidence 35678999999999998887431 3468999999653111 11111 14589999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCceEEEEecCcee
Q 016468 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIY 107 (389)
Q Consensus 73 K~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~Iy 107 (389)
|+....+.+....+. .+.|+.+..+.|+.|-
T Consensus 174 Kaal~~lt~~la~e~----~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 174 KSALNAATKSLSVDL----YPQRIMCVSLHPGWVK 204 (248)
T ss_dssp HHHHHHHHHHHHHHH----GGGTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHHh----CCCCeEEEEcCCCccc
Confidence 999988877654211 2368999999998884
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.38 E-value=0.015 Score=52.62 Aligned_cols=82 Identities=4% Similarity=-0.055 Sum_probs=58.1
Q ss_pred CcchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 7 LQFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
.++....++|+.++..+.+++... .-.++|.+||..+. -..| .+...|+.||+..|.+++...
T Consensus 137 ~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~----------~~~p-----~y~~~y~asKaal~~ltr~lA 201 (329)
T d1uh5a_ 137 KGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQ----------KVVP-----GYGGGMSSAKAALESDTRVLA 201 (329)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT----------SCCT-----TCTTTHHHHHHHHHHHHHHHH
T ss_pred hhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhc----------cccc-----ccchhhhhhhccccccchhhH
Confidence 456778899999999999988765 22478999887641 1111 114679999999998888765
Q ss_pred CCCCCCCCCCCceEEEEecCce
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAI 106 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~I 106 (389)
... +.++|+++..|.|+.|
T Consensus 202 ~El---a~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 202 YHL---GRNYNIRINTISAGPL 220 (329)
T ss_dssp HHH---HHHHCCEEEEEEECCC
T ss_pred HHH---hcccCcEEEEEecCcc
Confidence 210 0114899999999876
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=95.33 E-value=0.023 Score=49.96 Aligned_cols=143 Identities=10% Similarity=0.022 Sum_probs=83.7
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+..+++|+.++.++.+++... +-.++|.++|..+-.. ..| ....|+.||+..+.+.+...
T Consensus 112 ~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~---------~~~------~~~~Y~asKaal~~ltk~lA 176 (272)
T d1xkqa_ 112 IYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ---------AQP------DFLYYAIAKAALDQYTRSTA 176 (272)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS---------CCC------SSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc---------CCC------CcchhhhHHHHHHHHHHHHH
Confidence 36778899999999999887653 2235565555332111 111 14689999999998887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCC------CCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhccc
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEE------RHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLL 158 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~------~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~ 158 (389)
... .+.|+++..|-|+.|--+... ................ .+ ..-+...+|+|+++..++..-.
T Consensus 177 ~el----~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~P-----lgR~g~pediA~~v~fL~S~~a 246 (272)
T d1xkqa_ 177 IDL----AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC-IP-----IGAAGKPEHIANIILFLADRNL 246 (272)
T ss_dssp HHH----HTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT-CT-----TSSCBCHHHHHHHHHHHHCHHH
T ss_pred HHh----cccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcC-CC-----CCCCcCHHHHHHHHHHHhCcch
Confidence 211 236899999999988533110 0011111112111110 00 1125668999999987763100
Q ss_pred CCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 159 DDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 159 ~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
..-..|+.+.+.+|..+
T Consensus 247 --------s~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 247 --------SFYILGQSIVADGGTSL 263 (272)
T ss_dssp --------HTTCCSCEEEESTTGGG
T ss_pred --------hCCccCeEEEeCcCHHH
Confidence 12357999988887543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=95.13 E-value=0.052 Score=47.35 Aligned_cols=134 Identities=11% Similarity=0.014 Sum_probs=86.3
Q ss_pred hhhHhhhhHHHHHHHHHHHc----------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016468 11 RVDEVNINGTCHVIEACLEF----------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLV 80 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~----------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l 80 (389)
.++.+|+.++..+.+++.+. +..++|.+||.... .+... ...|+.||+..+.+.
T Consensus 138 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~------------~~~~~----~~~Y~asKaal~~lt 201 (284)
T d1e7wa_ 138 DLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN------------QPLLG----YTIYTMAKGALEGLT 201 (284)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTT------------SCCTT----CHHHHHHHHHHHHHH
T ss_pred HHHhhheeeeeeeeccccchhhhhHHHhcCCCCccccccccccc------------CCccc----eeeeccccccchhhh
Confidence 46789999999998887542 23367777776531 11111 468999999999988
Q ss_pred HHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCC
Q 016468 81 LKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDD 160 (389)
Q Consensus 81 ~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~ 160 (389)
+...... .+.|+++.+|-|+.+--. ...-+...+......+. .+ -+...+|+++++..++..
T Consensus 202 ~~lA~el----~~~gIrvN~I~PG~t~~~--~~~~~~~~~~~~~~~pl--~~------R~~~peeiA~~v~fL~S~---- 263 (284)
T d1e7wa_ 202 RSAALEL----APLQIRVNGVGPGLSVLV--DDMPPAVWEGHRSKVPL--YQ------RDSSAAEVSDVVIFLCSS---- 263 (284)
T ss_dssp HHHHHHH----GGGTEEEEEEEESSBCCG--GGSCHHHHHHHHTTCTT--TT------SCBCHHHHHHHHHHHHSG----
T ss_pred HHHHHHh----CCcccccccccccccccc--ccCCHHHHHHHHhcCCC--CC------CCCCHHHHHHHHHHHhCc----
Confidence 8765321 236899999999864222 12234455555444321 11 245689999999887741
Q ss_pred CCCCCCCCCCCCceEEEeCCCCC
Q 016468 161 IPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 161 ~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
...-..|+.+.+.+|-.+
T Consensus 264 -----~s~~itG~~i~VDGG~sl 281 (284)
T d1e7wa_ 264 -----KAKYITGTCVKVDGGYSL 281 (284)
T ss_dssp -----GGTTCCSCEEEESTTGGG
T ss_pred -----hhcCccCCeEEECcChhc
Confidence 134568999988887654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=94.38 E-value=0.048 Score=48.00 Aligned_cols=138 Identities=6% Similarity=-0.058 Sum_probs=89.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHHcCC--CeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEFGI--QRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNG 85 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~gv--krlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~ 85 (389)
+....+++|+.++.++.+++..... .+.+.+++...... ... ....|+.+|+..+.+......
T Consensus 144 ~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~----~~~~y~~aKaa~~~l~~~~a~ 208 (297)
T d1d7oa_ 144 GYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI-----------IPG----YGGGMSSAKAALESDTRVLAF 208 (297)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC-----------CTT----CTTTHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccc-----------ccc----cccceecccccccccccccch
Confidence 4667889999999999999886532 24556665542111 011 146899999988877765432
Q ss_pred CCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccCCCCC
Q 016468 86 RPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLDDIPG 163 (389)
Q Consensus 86 ~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~~~~~ 163 (389)
.. +.+.|+++..|.|+.|.-+..... ...+.+...+.-+.- -+...+|++.+++.++..
T Consensus 209 e~---~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~------- 269 (297)
T d1d7oa_ 209 EA---GRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSP------- 269 (297)
T ss_dssp HH---HHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSG-------
T ss_pred hc---cccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCc-------
Confidence 10 012479999999999977654432 345555555433221 245689999999888741
Q ss_pred CCCCCCCCCceEEEeCCC
Q 016468 164 QKGRPIASGQPYFVSDGF 181 (389)
Q Consensus 164 ~~~~~~~~g~~y~i~~~~ 181 (389)
...-..|+++.+.+|-
T Consensus 270 --~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 270 --LASAITGATIYVDNGL 285 (297)
T ss_dssp --GGTTCCSCEEEESTTG
T ss_pred --hhcCCcCceEEECcCH
Confidence 1345689998887774
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.85 E-value=0.021 Score=49.42 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=73.9
Q ss_pred CcchhhhHhhhhHHHHHHHHHH----HcCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 7 LQFGRVDEVNINGTCHVIEACL----EFGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 7 ~~~~~~~~vNv~gt~nll~aa~----~~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
.+.+.++++|+.|+.++.+++. +.+-.++|.+||..+..+ .| ....|+.||+..+.+.+.
T Consensus 106 ~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~----------~~------~~~~Y~asKaal~~~~~~ 169 (244)
T d1yb1a_ 106 PQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS----------VP------FLLAYCSSKFAAVGFHKT 169 (244)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC----------HH------HHHHHHHHHHHHHHHHHH
T ss_pred hHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC----------CC------CcHHHHHHHHHHHHHHHH
Confidence 3567889999999998888775 456678999999885221 11 146899999998888777
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
...+ +...+..|+.+.++.|+.|--+-.+. .. .........+|+++.++.++.
T Consensus 170 La~E-l~~~~~~gI~V~~i~PG~v~T~~~~~------------~~-------~~~~~~~~pe~va~~i~~~~~ 222 (244)
T d1yb1a_ 170 LTDE-LAALQITGVKTTCLCPNFVNTGFIKN------------PS-------TSLGPTLEPEEVVNRLMHGIL 222 (244)
T ss_dssp HHHH-HHHTTCTTEEEEEEEETHHHHCSTTC------------TH-------HHHCCCCCHHHHHHHHHHHHH
T ss_pred HHHH-HHhhcCCCEEEEEEEcCCCCChhhhC------------cC-------ccccCCCCHHHHHHHHHHHHh
Confidence 6421 00002257999999999773221111 00 001123457899999998876
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=92.74 E-value=0.17 Score=44.32 Aligned_cols=137 Identities=12% Similarity=0.003 Sum_probs=84.3
Q ss_pred cchhhhHhhhhHHHHHHHHHHH-----cCCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLE-----FGIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLK 82 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~-----~gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~ 82 (389)
+......+|..+...+...+.. .+-..++.+||.....+ .+ ....|+.||+..+.+.+.
T Consensus 126 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~----------~~------~~~~YsasKaal~~ltk~ 189 (294)
T d1w6ua_ 126 AWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG----------SG------FVVPSASAKAGVEAMSKS 189 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------CT------TCHHHHHHHHHHHHHHHH
T ss_pred hhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc----------cc------ccchHHHHHHHHHHHHHH
Confidence 4566778888888877666542 23446777777653111 11 136799999999998887
Q ss_pred hCCCCCCCCCCCCceEEEEecCceecCCCCCC---HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcccC
Q 016468 83 SNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH---LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGLLD 159 (389)
Q Consensus 83 ~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~---~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l~~ 159 (389)
..... ...|+++.+|-|+.|--+..... ...........-+.- -+...+|++.++..++..
T Consensus 190 lA~el----a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~---------R~~~pediA~~v~fL~sd--- 253 (294)
T d1w6ua_ 190 LAAEW----GKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG---------RLGTVEELANLAAFLCSD--- 253 (294)
T ss_dssp HHHHH----GGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS---------SCBCHHHHHHHHHHHTSG---
T ss_pred HHHHH----hHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC---------CCCCHHHHHHHHHHHhCc---
Confidence 65321 23689999999999965432211 122333333322211 255689999999988741
Q ss_pred CCCCCCCCCCCCCceEEEeCCCC
Q 016468 160 DIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 160 ~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
...-..|+++.+.+|..
T Consensus 254 ------~s~~itG~~i~vDGG~~ 270 (294)
T d1w6ua_ 254 ------YASWINGAVIKFDGGEE 270 (294)
T ss_dssp ------GGTTCCSCEEEESTTHH
T ss_pred ------hhcCCCCcEEEECCChh
Confidence 03446899998888753
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=92.70 E-value=0.15 Score=43.64 Aligned_cols=130 Identities=15% Similarity=0.117 Sum_probs=76.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---------------CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHH
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---------------GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRS 72 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---------------gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~S 72 (389)
+.+..+++|+.|+.++.+++... ...+++.+|+........ ....+..+ ...|+.|
T Consensus 105 ~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~-----~~~~~~~~----~~aY~aS 175 (250)
T d1yo6a1 105 VIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN-----TSGSAQFP----VLAYRMS 175 (250)
T ss_dssp HHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC-----CSTTSSSC----BHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC-----cccccchh----HHHHHHH
Confidence 45678999999999998887531 123677777755311110 11111222 3579999
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHH
Q 016468 73 KSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALIL 152 (389)
Q Consensus 73 K~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~ 152 (389)
|+....+.+....+. ++.|+++..+-||.|= +. +. +. ...+..++.++.++.
T Consensus 176 Kaal~~l~~~la~el----~~~gI~v~~i~PG~v~----T~----m~-----~~-----------~~~~~~e~~a~~~~~ 227 (250)
T d1yo6a1 176 KAAINMFGRTLAVDL----KDDNVLVVNFCPGWVQ----TN----LG-----GK-----------NAALTVEQSTAELIS 227 (250)
T ss_dssp HHHHHHHHHHHHHHT----GGGTCEEEEEECCCC-------------------------------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----cccCeEEEEEecCCCC----CC----CC-----CC-----------CCCCCHHHHHHHHHH
Confidence 999998888765321 3468999999998773 11 10 00 012456888888888
Q ss_pred HHhcccCCCCCCCCCCCCCCceEEEeCCCCCC
Q 016468 153 ASMGLLDDIPGQKGRPIASGQPYFVSDGFPIN 184 (389)
Q Consensus 153 a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~~s 184 (389)
.++.+ .+...|+. +..+++|..
T Consensus 228 ~~~~~---------~~~~sG~f-~~~~g~p~~ 249 (250)
T d1yo6a1 228 SFNKL---------DNSHNGRF-FMRNLKPYE 249 (250)
T ss_dssp HHTTC---------CGGGTTCE-EETTEEECC
T ss_pred HHhcC---------CCCCCeEE-ECCCCeeCC
Confidence 88632 23446764 445666654
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.02 E-value=0.47 Score=40.64 Aligned_cols=121 Identities=9% Similarity=0.095 Sum_probs=73.9
Q ss_pred cCcchhhhHhhhhHHHHHHHHHH----HcC--CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016468 6 MLQFGRVDEVNINGTCHVIEACL----EFG--IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQL 79 (389)
Q Consensus 6 ~~~~~~~~~vNv~gt~nll~aa~----~~g--vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~ 79 (389)
..+.+..+++|+.++-++.+++. +.+ -.++|.+||... + ...|... ...|+.+|+..+.+
T Consensus 110 ~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~-~---------~~~p~~~----~~~Y~~sKaal~~l 175 (257)
T d1xg5a_ 110 TSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG-H---------RVLPLSV----THFYSATKYAVTAL 175 (257)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG-T---------SCCSCGG----GHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHh-c---------CCCCCcc----cHHHHHHHHHHHhC
Confidence 35677889999999988877764 333 358999999774 1 1112111 35699999999998
Q ss_pred HHHhCCCCCCCCCCCCceEEEEecCceecCCC----CCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 80 VLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGE----ERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 80 l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~----~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
.+.+.... . ..+.++++.++-|+.+=.+.. +.......... ....+...+|+|++++.++.
T Consensus 176 tr~la~el-~-~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~-------------~~~r~~~pedvA~~v~fL~s 240 (257)
T d1xg5a_ 176 TEGLRQEL-R-EAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY-------------EQMKCLKPEDVAEAVIYVLS 240 (257)
T ss_dssp HHHHHHHH-H-HTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH-------------C---CBCHHHHHHHHHHHHH
T ss_pred HHHHHHHH-H-hCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC-------------CCCCCcCHHHHHHHHHHHhC
Confidence 87654110 0 013689999999987632210 01111111111 11235679999999988875
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=91.79 E-value=0.57 Score=39.76 Aligned_cols=94 Identities=13% Similarity=0.016 Sum_probs=62.6
Q ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHH
Q 016468 66 VDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDN 145 (389)
Q Consensus 66 ~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdD 145 (389)
...|+.||+.-+.+.+...... .+.|+++..|.|+.|.-+... -....+.+.+.-+. + +-+...+|
T Consensus 169 ~~~Y~asKaal~~lt~~lA~e~----~~~gIrVN~I~PG~i~t~~~~--~~~~~~~~~~~~pl---~-----r~~~~pee 234 (266)
T d1mxha_ 169 FCVYTMAKHALGGLTRAAALEL----APRHIRVNAVAPGLSLLPPAM--PQETQEEYRRKVPL---G-----QSEASAAQ 234 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH----GGGTEEEEEEEESSBSCCSSS--CHHHHHHHHTTCTT---T-----SCCBCHHH
T ss_pred hhhhhhhHHHHhhhHHHHHHHh----CccCcEEEEeccCcEeccccC--CHHHHHHHHhcCCC---C-----CCCCCHHH
Confidence 5789999999998888765321 236899999999988654332 23444444433221 1 12356899
Q ss_pred HHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 146 LVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 146 la~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
++++++.++... ..-..|+.+.+.+|-.
T Consensus 235 va~~v~fL~s~~---------s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 235 IADAIAFLVSKD---------AGYITGTTLKVDGGLI 262 (266)
T ss_dssp HHHHHHHHHSGG---------GTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCch---------hCCccCCeEEECccHh
Confidence 999999888521 3446899988877743
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.86 E-value=0.13 Score=44.58 Aligned_cols=113 Identities=18% Similarity=0.108 Sum_probs=73.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc---CCCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF---GIQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSN 84 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~---gvkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~ 84 (389)
+.+...++|+.++.++.+++... +-.++|.+||.....+ .| ....|+.||+..+.+.+...
T Consensus 115 ~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~----------~p------~~~~Y~asKaal~~~~~~La 178 (269)
T d1xu9a_ 115 HVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA----------YP------MVAAYSASKFALDGFFSSIR 178 (269)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC----------CT------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC----------CC------CchHHHHHHHHHHHHHHHHH
Confidence 45677899999999888887532 2358999999774221 11 14799999999998887764
Q ss_pred CCCCCCCCCCCceEEEEecCceecCCCCCCHHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHh
Q 016468 85 GRPFKKNNRKCLYTCAVRPAAIYGPGEERHLPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASM 155 (389)
Q Consensus 85 ~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~ 155 (389)
... . .++.++.+..+.||.|- + .+......+. ...+....+++++.++.+..
T Consensus 179 ~El-~-~~~~~I~V~~v~PG~v~----T----~~~~~~~~~~---------~~~~~~~~e~~a~~i~~~~~ 230 (269)
T d1xu9a_ 179 KEY-S-VSRVNVSITLCVLGLID----T----ETAMKAVSGI---------VHMQAAPKEECALEIIKGGA 230 (269)
T ss_dssp HHH-H-HHTCCCEEEEEEECCBC----C----HHHHHHSCGG---------GGGGCBCHHHHHHHHHHHHH
T ss_pred HHh-h-hcCCCEEEEEEecCcCC----C----cHHHHhccCC---------ccccCCCHHHHHHHHHHHhh
Confidence 210 0 01246888999998773 2 2222222221 12234567899998888775
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.17 E-value=0.056 Score=47.26 Aligned_cols=96 Identities=20% Similarity=0.105 Sum_probs=58.2
Q ss_pred cchhhhHhhhhHHHHHHHHHHHc--CCCeEEEecCCceecCCcccC-----------------------------CCCCC
Q 016468 8 QFGRVDEVNINGTCHVIEACLEF--GIQRLVYVSTYNVVFGGKEIV-----------------------------NGNES 56 (389)
Q Consensus 8 ~~~~~~~vNv~gt~nll~aa~~~--gvkrlV~~SS~~vvyg~~~~~-----------------------------~~~E~ 56 (389)
+.+..+++|+.|+.++.+++... .-.|+|.+||...+.+..... .....
T Consensus 104 ~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (275)
T d1wmaa1 104 QAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQ 183 (275)
T ss_dssp HHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhcccccccc
Confidence 45678999999999999999754 224899999976432211000 00011
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCcee
Q 016468 57 LPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIY 107 (389)
Q Consensus 57 ~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~Iy 107 (389)
.+.. +...|+.||+....+.+....+.-+.....++.+..+-|+.|-
T Consensus 184 ~~~~----~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~ 230 (275)
T d1wmaa1 184 KEGW----PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230 (275)
T ss_dssp TTTC----CSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred cCCC----chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence 1111 2568999999877655432110000012358999999999884
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=89.58 E-value=0.11 Score=44.71 Aligned_cols=136 Identities=8% Similarity=-0.034 Sum_probs=77.3
Q ss_pred hhhHhhhhHHHHHHHHHHHcC-CCeEEEecCCceecCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC
Q 016468 11 RVDEVNINGTCHVIEACLEFG-IQRLVYVSTYNVVFGGKEIVNGNESLPYFPIDEHVDSYGRSKSVAEQLVLKSNGRPFK 89 (389)
Q Consensus 11 ~~~~vNv~gt~nll~aa~~~g-vkrlV~~SS~~vvyg~~~~~~~~E~~p~~p~~~~~~~Y~~SK~~aE~~l~~~~~~~~~ 89 (389)
....+|.........++.... -...+.++|... .. ..| ....|+.+|+..+.+.+......
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~-~~---------~~p------~~~~y~~sK~a~~~ltr~lA~e~-- 178 (268)
T d2h7ma1 117 KGIHISAYSYASMAKALLPIMNPGGSIVGMDFDP-SR---------AMP------AYNWMTVAKSALESVNRFVAREA-- 178 (268)
T ss_dssp HHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCC-SS---------CCT------TTHHHHHHHHHHHHHHHHHHHHH--
T ss_pred hhhhhhhhHHHHHHHHHhhhcccccccccccccc-cc---------cCc------ccchhhccccchhhccccchhhh--
Confidence 345566666666666665542 223444444331 11 111 14789999999999888764211
Q ss_pred CCCCCCceEEEEecCceecC--------CCCCC----HHHHHHHHHcCCCcceecCCCccccceeHHHHHHHHHHHHhcc
Q 016468 90 KNNRKCLYTCAVRPAAIYGP--------GEERH----LPRIVSLAKLGLVPFKIGEPSVKTDWIYVDNLVLALILASMGL 157 (389)
Q Consensus 90 ~~~~~gl~~~ilRp~~IyGp--------~~~~~----~~~li~~~~~g~~~~~~g~~~~~~~~v~vdDla~a~~~a~~~l 157 (389)
.+.|+++..|.|+.|--+ ..... ...+.+...+.-+. .+.+...+|+++++..++..
T Consensus 179 --~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl--------~rr~~~p~dva~~v~fL~Sd- 247 (268)
T d2h7ma1 179 --GKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI--------GWNMKDATPVAKTVCALLSD- 247 (268)
T ss_dssp --HTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT--------CCCTTCCHHHHHHHHHHHSS-
T ss_pred --hccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCc-
Confidence 236899999999987532 11100 11122222221111 12356689999999888741
Q ss_pred cCCCCCCCCCCCCCCceEEEeCCCCC
Q 016468 158 LDDIPGQKGRPIASGQPYFVSDGFPI 183 (389)
Q Consensus 158 ~~~~~~~~~~~~~~g~~y~i~~~~~~ 183 (389)
...-..|+++.+.+|...
T Consensus 248 --------~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 248 --------WLPATTGDIIYADGGAHT 265 (268)
T ss_dssp --------SCTTCCSEEEEESTTGGG
T ss_pred --------hhcCccCCEEEECcCccc
Confidence 144568999988877644
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=88.63 E-value=0.56 Score=40.20 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=61.7
Q ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCCCCCceEEEEecCceecCCCCCC--HHHHHHHHHcCCCcceecCCCccccceeH
Q 016468 66 VDSYGRSKSVAEQLVLKSNGRPFKKNNRKCLYTCAVRPAAIYGPGEERH--LPRIVSLAKLGLVPFKIGEPSVKTDWIYV 143 (389)
Q Consensus 66 ~~~Y~~SK~~aE~~l~~~~~~~~~~~~~~gl~~~ilRp~~IyGp~~~~~--~~~li~~~~~g~~~~~~g~~~~~~~~v~v 143 (389)
...|+.+|...+.+++...... .+.|+++.++.|+.+.-+..... ............+. .-+...
T Consensus 154 ~~~y~asK~al~~ltr~lA~e~----~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~p 220 (274)
T d2pd4a1 154 YNVMGLAKAALESAVRYLAVDL----GKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSL 220 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH----HTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCH
T ss_pred chhhhHHHHHHHHHHHhhHHHh----cCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCH
Confidence 4789999999999887654211 23689999999998865433221 12333333222211 125679
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCCCCCCceEEEeCCCC
Q 016468 144 DNLVLALILASMGLLDDIPGQKGRPIASGQPYFVSDGFP 182 (389)
Q Consensus 144 dDla~a~~~a~~~l~~~~~~~~~~~~~~g~~y~i~~~~~ 182 (389)
+|++.++..++.. ...-..|+++.+.+|..
T Consensus 221 edIA~~v~fL~S~---------~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 221 EEVGNAGMYLLSS---------LSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp HHHHHHHHHHHSG---------GGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhCh---------hhCCCcCceEEECCChh
Confidence 9999999888752 13456899998887753
|