Citrus Sinensis ID: 016530

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
MDLDQFLASSVKTMLKLGMLLSRIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA
ccccccccccccccccccEEEEEEEEcccEEEEEEECccCEEEEccEEEEcccEEEEEEEEcccccccccccEEEccccccccccccccHHHHHHHcccccccEEEEEECcccccccccEEEEcccccccEEEEEEEEEccEEEEEEEEEcCEEEccEEEEECcccEEEEEEcccccEEccHHHHHHHHHHHccccCEEEcEEEEEEcccccEEEEEEcccccccCEEccEEEECcccEEEEEcEEEEEEcccCCcccccccccccEEEEEccccccccccHHHHHHHHHHHHcccccccccEEECcccccccccEEEEEccEEEEEcccccEEEEccccccEEEEEEEEccccccccccEEEccccccccEEEEEccccEEEEcccc
*DLDQFLASSVKTMLKLGMLLSRIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA*
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MDLDQFLASSVKTMLKLGMLLSRIRCVLVLIVHFLNWCPFTWQCACLQIFLLQVFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKHFKGKHTYVPVTKKGYWQFELGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMAVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCDRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Aspartic proteinase oryzasin-1 probableQ42456
Aspartic proteinase A1 Involved in the breakdown of propeptides of storage proteins in protein-storage vacuoles (By similarity). Possesses aspartic protease activity in vitro.probableO65390

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.23.-Aspartic endopeptidases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1LYA, chain B
Confidence level:very confident
Coverage over the Query: 47-196,298-388
View the alignment between query and template
View the model in PyMOL
Template: 1QDM, chain A
Confidence level:very confident
Coverage over the Query: 23-234,258-388
View the alignment between query and template
View the model in PyMOL