Citrus Sinensis ID: 016569

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------
MGSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLILAFGPGITFEGILARNLTV
ccccccccccccccccEEEEEEEccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccccHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccccEEHHHHcccccEEEEEcccccccccccEEEEcccEEEcccccccEEEEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccHHHHHHHHHHHcccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccEEEEEEEcHHHHHHHHHHHcccc
cccHHHHHHHccccccEEEEEEEEccccEEEcccHHHHHHHHcccccHHHHHHHHHHHHHccccEEEccccHHHHHccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccEEEEEEccccccccHHHHHHHHHccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEEEcHHHcccccccccHHHHHHHHHEccEEEEEEEEcccccccccHHHHHHHHHHccccccccccccEEEccEEEEcccccHHHHHHHHHHHHHHHHHHcccccccHHHcEEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHHcEcHHHHHHHHHHHHHHHHHHccccccccccEEEEEEcccccEEEEEEEEcccc
mgslagfankaspgKATILALGKAFPHQLVMQEFLVDgyfkntncddpelKQKLTRLCKTTTVKTRYVVMSDEILKKYpelaieglptVKQRLDICNKAVTQMAIEASQACIkswgrpitdiTHVVYVsssearlpggdlylarglglspetQRVMLYFMGCSGGVSGLRVAKdiaennpgsrvlLATSettiigfkppsaerpydlvGVALfgdgagamivgsdpvpserplfELHTAIQNflpntektidgrlteegISFKLARELPQIIEDNIEGFCGKlmgnigftnndyNKMFwavhpggpaILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLkmksqdhedtdwglilafgpgitfegILARNLTV
mgslagfankaspGKATILALGKAFPHQLVMQEFLVDGYFKNTncddpelkqkltrlcktttvktryvvMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLAtsettiigfkppsaerpyDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQnflpntektidgRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLILAFGPGITFEGILARNLTV
MGSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLILAFGPGITFEGILARNLTV
***************ATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLK*****HEDTDWGLILAFGPGITFEGILAR****
*****************ILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEY*****************WGLILAFGPGITFEGILARNLTV
MGSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLILAFGPGITFEGILARNLTV
************PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMK*QDHEDTDWGLILAFGPGITFEGILARNLT*
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MGSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLILAFGPGITFEGILARNLTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query387 2.2.26 [Sep-21-2011]
Q43188389 Chalcone synthase 2 OS=So N/A no 0.958 0.953 0.436 4e-86
P30080388 Chalcone synthase 6 OS=Gl no no 0.961 0.958 0.422 6e-86
Q9MB38393 Chalcone synthase DII OS= N/A no 0.961 0.946 0.420 9e-86
P23419389 Chalcone synthase 2 OS=So N/A no 0.958 0.953 0.433 1e-85
P48406388 Chalcone synthase 5 OS=Gl no no 0.961 0.958 0.420 1e-85
O22045388 Chalcone synthase D OS=Ip N/A no 0.945 0.943 0.423 2e-85
P19168388 Chalcone synthase 3 OS=Gl no no 0.961 0.958 0.420 2e-85
Q9MB41393 Chalcone synthase LF2 OS= N/A no 0.961 0.946 0.417 3e-85
P24826388 Chalcone synthase 1 OS=Gl no no 0.961 0.958 0.417 4e-85
Q9MB39393 Chalcone synthase LF4 OS= N/A no 0.961 0.946 0.414 5e-85
>sp|Q43188|CHS2_SOLTU Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1 Back     alignment and function desciption
 Score =  318 bits (816), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 164/376 (43%), Positives = 238/376 (63%), Gaps = 5/376 (1%)

Query: 14  GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSD 72
           G ATI+A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +  RY+ +++
Sbjct: 15  GPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTE 74

Query: 73  EILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSE 132
           EILK+ P +     P++  R DI    V ++  EA+Q  IK WG+P + ITHVV+ ++S 
Sbjct: 75  EILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSG 134

Query: 133 ARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETT 192
             +PG D  L + LGL P  +R+M+Y  GC  G + +R+AKD+AENN G+RVL+  SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEIT 194

Query: 193 IIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS-ERPLFELHTAIQNFLPNTEKTI 251
            + F  PS      +VG ALFGDGA AMI+GSDP+P  ERPLFEL +A Q  LP++E  I
Sbjct: 195 AVTFSGPSDTHLDSMVGQALFGDGAAAMIIGSDPLPEVERPLFELVSAAQTLLPDSEGAI 254

Query: 252 DGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNK 311
           DG L E G++F L +++P +I  NIE    +    +G +  D+N +FW  HPGGPAIL++
Sbjct: 255 DGHLREVGLTFHLLKDVPGLISKNIEKSLIEAFQPLGIS--DWNSIFWIAHPGGPAILDQ 312

Query: 312 LEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMK-SQDHEDTDWGLILA 370
           +E +L L P+KL A+R+ L DYGN SS  ++++L+ M + S K   S   E  DWG++  
Sbjct: 313 VELKLGLKPEKLQATRQVLSDYGNMSSACVLFILDEMRKASSKEGLSTTGEGLDWGVLFG 372

Query: 371 FGPGITFEGILARNLT 386
           FGPG+T E ++  +++
Sbjct: 373 FGPGLTVETVVLHSVS 388
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin.
Solanum tuberosum (taxid: 4113)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4
>sp|P30080|CHS6_SOYBN Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1 Back     alignment and function description
>sp|Q9MB38|CHS6_IPOBA Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1 Back     alignment and function description
>sp|P23419|CHS2_SOLLC Chalcone synthase 2 OS=Solanum lycopersicum GN=CHS2 PE=2 SV=2 Back     alignment and function description
>sp|P48406|CHS5_SOYBN Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1 Back     alignment and function description
>sp|O22045|CHSD_IPONI Chalcone synthase D OS=Ipomoea nil GN=CHSD PE=2 SV=1 Back     alignment and function description
>sp|P19168|CHS3_SOYBN Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1 Back     alignment and function description
>sp|Q9MB41|CHS2_IPOBA Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1 Back     alignment and function description
>sp|P24826|CHS1_SOYBN Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1 Back     alignment and function description
>sp|Q9MB39|CHS4_IPOBA Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
255576739387 Chalcone synthase, putative [Ricinus com 0.997 0.997 0.871 0.0
224078067391 chs-like protein [Populus trichocarpa] g 0.987 0.976 0.880 0.0
225427892392 PREDICTED: chalcone synthase A [Vitis vi 0.987 0.974 0.864 0.0
356538536387 PREDICTED: chalcone synthase-like [Glyci 0.981 0.981 0.837 0.0
71089697392 chalcone synthase family protein [Arabid 0.997 0.984 0.816 0.0
297802476392 chalcone synthase family protein [Arabid 0.997 0.984 0.816 0.0
18418528392 Chalcone and stilbene synthase family pr 0.997 0.984 0.813 0.0
116831425393 unknown [Arabidopsis thaliana] 0.997 0.982 0.813 0.0
71089659392 chalcone synthase family protein [Arabid 1.0 0.987 0.808 0.0
71089695392 chalcone synthase family protein [Arabid 0.997 0.984 0.811 0.0
>gi|255576739|ref|XP_002529257.1| Chalcone synthase, putative [Ricinus communis] gi|223531293|gb|EEF33135.1| Chalcone synthase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  704 bits (1817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/388 (87%), Positives = 368/388 (94%), Gaps = 2/388 (0%)

Query: 1   MGSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKT 60
           MGS AG +  A+PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKT
Sbjct: 1   MGSEAGLSKMANPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKT 60

Query: 61  TTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPIT 120
           TTVKTRYVVMS+EIL+KYPELA+EGLPT+KQRLDICN+AVT+MAIEASQ CIK+WGRPI+
Sbjct: 61  TTVKTRYVVMSEEILEKYPELAVEGLPTLKQRLDICNEAVTKMAIEASQKCIKNWGRPIS 120

Query: 121 DITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNP 180
           DITH+VYVSSSEARLPGGDL+LARGLGLSPETQRV LYFMGCSGGVSGLR+AKDIAENNP
Sbjct: 121 DITHLVYVSSSEARLPGGDLHLARGLGLSPETQRVTLYFMGCSGGVSGLRIAKDIAENNP 180

Query: 181 GSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVP-SERPLFELHTA 239
           GSRVLLATSETTIIGFKPPSA+RPYDLVGVALFGDGAGAMI+G+DPV  +E PLFELHTA
Sbjct: 181 GSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGTDPVSKTESPLFELHTA 240

Query: 240 IQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFW 299
           IQNFLP+TEK IDGRLTEEGISFKLARELP IIEDNIEGFC KLMG  G T+ DYNK+FW
Sbjct: 241 IQNFLPDTEKIIDGRLTEEGISFKLARELPHIIEDNIEGFCQKLMGVAGLTDKDYNKLFW 300

Query: 300 AVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQD 359
           AVHPGGPAILN++EKRL+L P+KLNASRRALMDYGNASSNTIVYVLEYM+EESLKMK ++
Sbjct: 301 AVHPGGPAILNRMEKRLDLFPEKLNASRRALMDYGNASSNTIVYVLEYMIEESLKMK-EE 359

Query: 360 HEDTDWGLILAFGPGITFEGILARNLTV 387
           + + +WGLILAFGPGITFEGILARNLTV
Sbjct: 360 NVNNEWGLILAFGPGITFEGILARNLTV 387

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224078067|ref|XP_002305482.1| chs-like protein [Populus trichocarpa] gi|222848446|gb|EEE85993.1| chs-like protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225427892|ref|XP_002276653.1| PREDICTED: chalcone synthase A [Vitis vinifera] Back     alignment and taxonomy information
>gi|356538536|ref|XP_003537759.1| PREDICTED: chalcone synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|71089697|gb|AAZ23705.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089705|gb|AAZ23709.1| chalcone synthase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297802476|ref|XP_002869122.1| chalcone synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314958|gb|EFH45381.1| chalcone synthase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18418528|ref|NP_567971.1| Chalcone and stilbene synthase family protein [Arabidopsis thaliana] gi|21554049|gb|AAM63130.1| chalcone synthase-like protein [Arabidopsis thaliana] gi|71089675|gb|AAZ23694.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089677|gb|AAZ23695.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089679|gb|AAZ23696.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089681|gb|AAZ23697.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089683|gb|AAZ23698.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089687|gb|AAZ23700.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089689|gb|AAZ23701.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089693|gb|AAZ23703.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089699|gb|AAZ23706.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089701|gb|AAZ23707.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089707|gb|AAZ23710.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089709|gb|AAZ23711.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089711|gb|AAZ23712.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089713|gb|AAZ23713.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089715|gb|AAZ23714.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089717|gb|AAZ23715.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089719|gb|AAZ23716.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089723|gb|AAZ23718.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089725|gb|AAZ23719.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089727|gb|AAZ23720.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089731|gb|AAZ23722.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089733|gb|AAZ23723.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089735|gb|AAZ23724.1| chalcone synthase family protein [Arabidopsis thaliana] gi|71089737|gb|AAZ23725.1| chalcone synthase family protein [Arabidopsis thaliana] gi|91806768|gb|ABE66111.1| chalcone and stilbene synthase family protein [Arabidopsis thaliana] gi|332661028|gb|AEE86428.1| Chalcone and stilbene synthase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116831425|gb|ABK28665.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|71089659|gb|AAZ23686.1| chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] gi|71089661|gb|AAZ23687.1| chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] Back     alignment and taxonomy information
>gi|71089695|gb|AAZ23704.1| chalcone synthase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query387
TAIR|locus:2116845392 LAP5 "LESS ADHESIVE POLLEN 5" 0.994 0.982 0.816 4.9e-172
TAIR|locus:2205588395 LAP6 "LESS ADHESIVE POLLEN 6" 0.963 0.944 0.675 8.5e-136
TAIR|locus:2126861385 AT4G00040 [Arabidopsis thalian 0.961 0.966 0.658 3.2e-129
UNIPROTKB|Q9FUB7390 Q9FUB7 "Chalcone synthase" [Hy 0.971 0.964 0.411 3.8e-78
UNIPROTKB|P30074389 CHS2 "Chalcone synthase 2" [Me 0.971 0.966 0.419 1.6e-77
UNIPROTKB|Q8RVK9389 CHS "Naringenin-chalcone synth 0.974 0.969 0.404 1.9e-76
TAIR|locus:2159098395 TT4 "TRANSPARENT TESTA 4" [Ara 0.968 0.949 0.403 3.6e-73
UNIPROTKB|D2DRC5388 BIS3 "Biphenyl synthase 3" [So 0.968 0.966 0.386 8.9e-70
UNIPROTKB|Q27Z07390 BIS "Biphenyl synthase" [Sorbu 0.979 0.971 0.371 8e-69
UNIPROTKB|Q8LIL0402 LOC_Os07g17010 "Curcuminoid sy 0.956 0.920 0.402 8e-69
TAIR|locus:2116845 LAP5 "LESS ADHESIVE POLLEN 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1672 (593.6 bits), Expect = 4.9e-172, P = 4.9e-172
 Identities = 315/386 (81%), Positives = 355/386 (91%)

Query:     3 SLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTT 62
             ++ G   K++PGKATILALGKAFPHQLVMQE+LVDGYFK T CDDPELKQKLTRLCKTTT
Sbjct:     7 AVLGSEKKSNPGKATILALGKAFPHQLVMQEYLVDGYFKTTKCDDPELKQKLTRLCKTTT 66

Query:    63 VKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDI 122
             VKTRYVVMS+EILKKYPELAIEG  TV QRLDICN AVT+MA+EAS+ACIK+WGR I+DI
Sbjct:    67 VKTRYVVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDI 126

Query:   123 THVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGS 182
             THVVYVSSSEARLPGGDLYLA+GLGLSP+T RV+LYF+GCSGGV+GLRVAKDIAENNPGS
Sbjct:   127 THVVYVSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGS 186

Query:   183 RVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVP-SERPLFELHTAIQ 241
             RVLLATSETTIIGFKPPS +RPYDLVGVALFGDGAGAMI+GSDP P  E+PLFELHTAIQ
Sbjct:   187 RVLLATSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICEKPLFELHTAIQ 246

Query:   242 NFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAV 301
             NFLP TEKTIDGRLTE+GI+FKL+RELPQIIEDN+E FC KL+G  G  + +YN+MFWAV
Sbjct:   247 NFLPETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAV 306

Query:   302 HPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHE 361
             HPGGPAILN++EKRLNL P+KL+ SRRALMDYGNASSN+IVYVLEYMLEES K+++ + E
Sbjct:   307 HPGGPAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESKKVRNMNEE 366

Query:   362 DTDWGLILAFGPGITFEGILARNLTV 387
             + +WGLILAFGPG+TFEGI+ARNL V
Sbjct:   367 ENEWGLILAFGPGVTFEGIIARNLDV 392
GO:0005737 "cytoplasm" evidence=ISM
GO:0009699 "phenylpropanoid biosynthetic process" evidence=ISS
GO:0010584 "pollen exine formation" evidence=RCA;IMP
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0030639 "polyketide biosynthetic process" evidence=IDA
GO:0080110 "sporopollenin biosynthetic process" evidence=IMP
GO:0090439 "tetraketide alpha-pyrone synthase activity" evidence=IDA
TAIR|locus:2205588 LAP6 "LESS ADHESIVE POLLEN 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126861 AT4G00040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9FUB7 Q9FUB7 "Chalcone synthase" [Hypericum androsaemum (taxid:140968)] Back     alignment and assigned GO terms
UNIPROTKB|P30074 CHS2 "Chalcone synthase 2" [Medicago sativa (taxid:3879)] Back     alignment and assigned GO terms
UNIPROTKB|Q8RVK9 CHS "Naringenin-chalcone synthase" [Cannabis sativa (taxid:3483)] Back     alignment and assigned GO terms
TAIR|locus:2159098 TT4 "TRANSPARENT TESTA 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|D2DRC5 BIS3 "Biphenyl synthase 3" [Sorbus aucuparia (taxid:36599)] Back     alignment and assigned GO terms
UNIPROTKB|Q27Z07 BIS "Biphenyl synthase" [Sorbus aucuparia (taxid:36599)] Back     alignment and assigned GO terms
UNIPROTKB|Q8LIL0 LOC_Os07g17010 "Curcuminoid synthase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CHSL6
chs-like protein (391 aa)
(Populus trichocarpa)
Predicted Functional Partners:
ACT2
actin 2; Actins are highly conserved proteins that are involved in various types of cell motili [...] (377 aa)
      • 0.506

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 0.0
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-132
pfam00195227 pfam00195, Chal_sti_synt_N, Chalcone and stilbene 1e-124
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 1e-105
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 1e-104
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 1e-102
PLN03170401 PLN03170, PLN03170, chalcone synthase; Provisional 1e-100
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 1e-99
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 5e-69
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 2e-59
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 1e-22
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 1e-14
cd00825332 cd00825, decarbox_cond_enzymes, decarboxylating co 1e-14
cd00327254 cd00327, cond_enzymes, Condensing enzymes; Family 4e-14
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 5e-12
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 9e-11
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 3e-09
pfam0854580 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr 8e-08
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 2e-07
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 1e-06
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 3e-06
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 6e-06
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 3e-05
PRK06840339 PRK06840, PRK06840, hypothetical protein; Validate 3e-05
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 3e-04
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 3e-04
PLN02326379 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei 0.001
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information 
 Score =  788 bits (2037), Expect = 0.0
 Identities = 303/388 (78%), Positives = 331/388 (85%), Gaps = 4/388 (1%)

Query: 1   MGSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKT 60
             S AG    A+PGKATILALGKAFP QLV QE+LVDGYF++T CDDP LK+KL RLCKT
Sbjct: 7   SASKAGSRRAANPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKT 66

Query: 61  TTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPIT 120
           TTVKTRYVVMS EIL KYPELA EG PT+KQRLDI N+AVTQMA+EAS ACIK WGRP++
Sbjct: 67  TTVKTRYVVMSKEILDKYPELATEGTPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVS 126

Query: 121 DITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNP 180
           DITH+VYVSSSEARLPGGDLYLA+ LGLSP+ QRVMLYF+GCSGGV+GLRVAKDIAENNP
Sbjct: 127 DITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNP 186

Query: 181 GSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVP-SERPLFELHTA 239
           GSRVLL TSETTI+GF+PPS +RPYDLVG ALFGDGA A+I+G+DP+P SE P FELHTA
Sbjct: 187 GSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTA 246

Query: 240 IQNFLPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFW 299
           IQ FLP TEKTIDGRLTEEGI+FKL RELPQ IEDNIEGFC KLM   G    DYN +FW
Sbjct: 247 IQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFW 306

Query: 300 AVHPGGPAILNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQD 359
           AVHPGGPAILN+LEK+L L P+KL  SRRALMDYGN SSNTIVYVLEYM EE  K   +D
Sbjct: 307 AVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEED 366

Query: 360 HEDTDWGLILAFGPGITFEGILARNLTV 387
            E   WGLILAFGPGITFEGILARNLT 
Sbjct: 367 EE---WGLILAFGPGITFEGILARNLTA 391

Length = 391
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|201072 pfam00195, Chal_sti_synt_N, Chalcone and stilbene synthases, N-terminal domain Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Back     alignment and domain information
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|235872 PRK06840, PRK06840, hypothetical protein; Validated Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 387
PLN03169391 chalcone synthase family protein; Provisional 100.0
PLN03170401 chalcone synthase; Provisional 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02932478 3-ketoacyl-CoA synthase 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
PRK06840339 hypothetical protein; Validated 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK04262347 hypothetical protein; Provisional 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 100.0
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 100.0
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.96
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.95
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 99.94
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.9
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.88
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.84
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.82
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.82
PRK08304337 stage V sporulation protein AD; Validated 99.81
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.74
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.7
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.7
PRK12404334 stage V sporulation protein AD; Provisional 99.7
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.68
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.68
PRK09051394 beta-ketothiolase; Provisional 99.66
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.66
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.65
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.63
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.63
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.62
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.61
PRK05790393 putative acyltransferase; Provisional 99.6
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.6
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.6
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.6
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.6
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.6
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.6
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.59
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.58
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.56
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.56
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.55
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.54
PRK06059399 lipid-transfer protein; Provisional 99.54
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.53
PLN02287452 3-ketoacyl-CoA thiolase 99.53
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.53
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.53
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.52
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.5
PRK07851406 acetyl-CoA acetyltransferase; Provisional 99.5
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.49
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 99.49
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 99.48
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.48
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.48
PRK06065392 acetyl-CoA acetyltransferase; Provisional 99.47
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.47
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.46
PRK08170 426 acetyl-CoA acetyltransferase; Provisional 99.46
PRK06158384 thiolase; Provisional 99.46
PRK08256391 lipid-transfer protein; Provisional 99.46
PLN02644394 acetyl-CoA C-acetyltransferase 99.45
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.45
PRK06289403 acetyl-CoA acetyltransferase; Provisional 99.44
PRK07516389 acetyl-CoA acetyltransferase; Provisional 99.44
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 99.42
PRK08963 428 fadI 3-ketoacyl-CoA thiolase; Reviewed 99.42
cd00832399 CLF Chain-length factor (CLF) is a factor required 99.42
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.41
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.41
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 99.39
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 99.39
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 99.39
PRK06366388 acetyl-CoA acetyltransferase; Provisional 99.39
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 99.38
PRK08131401 acetyl-CoA acetyltransferase; Provisional 99.38
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.38
PRK06504390 acetyl-CoA acetyltransferase; Provisional 99.38
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.37
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.36
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 99.34
TIGR02446 430 FadI fatty oxidation complex, beta subunit FadI. T 99.33
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 99.29
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 99.28
PRK08257498 acetyl-CoA acetyltransferase; Validated 99.27
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 99.27
PRK08142388 acetyl-CoA acetyltransferase; Provisional 99.21
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 99.2
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 99.19
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 99.09
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 99.06
PRK06066385 acetyl-CoA acetyltransferase; Provisional 99.06
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 99.04
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 99.01
PRK07855386 lipid-transfer protein; Provisional 98.94
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.87
COG3321 1061 Polyketide synthase modules and related proteins [ 98.83
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.81
PRK06365 430 acetyl-CoA acetyltransferase; Provisional 98.77
PRK07937352 lipid-transfer protein; Provisional 98.71
PRK09268 427 acetyl-CoA acetyltransferase; Provisional 98.69
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 98.24
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 98.03
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 97.6
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.54
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 96.96
KOG1392 465 consensus Acetyl-CoA acetyltransferase [Lipid tran 96.87
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 96.61
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 96.19
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 95.78
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 95.46
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 94.35
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 93.8
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.61
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 92.59
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.31
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 92.24
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 92.03
PRK09268427 acetyl-CoA acetyltransferase; Provisional 91.94
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 91.86
PF02801119 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina 91.55
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 91.54
PRK06840339 hypothetical protein; Validated 91.18
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 91.14
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 91.1
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 90.88
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 90.74
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 90.41
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 89.68
PF08392 290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 89.42
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 89.32
PRK06025417 acetyl-CoA acetyltransferase; Provisional 87.72
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 87.64
PRK04262347 hypothetical protein; Provisional 86.99
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 85.68
PRK06157398 acetyl-CoA acetyltransferase; Validated 85.13
PLN02192 511 3-ketoacyl-CoA synthase 83.36
PLN02377 502 3-ketoacyl-CoA synthase 83.28
PLN03172 393 chalcone synthase family protein; Provisional 83.05
PLN03173 391 chalcone synthase; Provisional 83.01
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 82.75
PLN02932 478 3-ketoacyl-CoA synthase 82.65
PLN03168 389 chalcone synthase; Provisional 81.56
cd00831 361 CHS_like Chalcone and stilbene synthases; plant-sp 80.76
PLN00415 466 3-ketoacyl-CoA synthase 80.06
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 80.01
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6e-61  Score=471.37  Aligned_cols=378  Identities=80%  Similarity=1.284  Sum_probs=316.2

Q ss_pred             ccccccCCCCceEEEEeeecCCCcccchhhHHHHHHhccCCCChHHHHHHHHHHhhcCccceeeecchhhhhhCcccccC
Q 016569            5 AGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIE   84 (387)
Q Consensus         5 ~~~~~~~~~~~~~I~g~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~~~~~~~~   84 (387)
                      +|-|--.-+.+++|.|+|+++|++.++|+++.+.+.+......+.++++.+++++++||++||++.+.+.+...+.+.+.
T Consensus        11 ~~~~~~~~~~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~   90 (391)
T PLN03169         11 AGSRRAANPGKATILALGKAFPSQLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATE   90 (391)
T ss_pred             ccccccCCCCCeEEEEEEeeCCCeecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCcccccc
Confidence            34444444567999999999999999999999865443222224466667889999999999999765556677888777


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEEccCCCCCCCHHHHHHHHcCCCCccccceeecccchh
Q 016569           85 GLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSG  164 (387)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~g  164 (387)
                      ..|++++|++.|.++..+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.++++++.||+|
T Consensus        91 ~~~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g  170 (391)
T PLN03169         91 GTPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSG  170 (391)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHH
Confidence            88999999999999999999999999999999999999999999998899999999999999999875347999999999


Q ss_pred             hHHHHHHHHHHHHcCCCCeEEEEeecccccCCCCCCCCCCcccchhhhccccceEEEEecCCCCC-CCCceEEEeeeeee
Q 016569          165 GVSGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS-ERPLFELHTAIQNF  243 (387)
Q Consensus       165 ~~~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~~~GDGAaA~vl~~~~~~~-~~~~~~l~~~~~~~  243 (387)
                      +++||.+|..++++++.++||||++|..+..++.+....+.|+....+|||||+|+||+.++... ..+.+++...++..
T Consensus       171 ~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~  250 (391)
T PLN03169        171 GVAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQF  250 (391)
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeE
Confidence            99999999999999999999999999988766433221123466788999999999999865421 12456777766667


Q ss_pred             ccCccccccceeecCceEEEECCchhHHHHHhHHHHHHHhhhhcCCCCCCCCceEEEEcCCCHHHHHHHHHHcCCCcccc
Q 016569          244 LPNTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNKLEKRLNLLPDKL  323 (387)
Q Consensus       244 ~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~did~~di~~i~hq~~~~~~~~~~~~lgi~~e~~  323 (387)
                      +|++.+.+.+.+.++|+.+.+++++|+.+.+.++.+++++|+++|++.-|++|++|++||+|.+|++.+.++||++++|+
T Consensus       251 ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~  330 (391)
T PLN03169        251 LPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKL  330 (391)
T ss_pred             cCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHH
Confidence            78776666677777888888899999999999999999999999998112335578999999999999999999999999


Q ss_pred             HHHHHHHhhcCCCCcchHHHHHHHHHHh-hhcccCCCCCCCCeEEEEeeccchhhhhhhhcccc
Q 016569          324 NASRRALMDYGNASSNTIVYVLEYMLEE-SLKMKSQDHEDTDWGLILAFGPGITFEGILARNLT  386 (387)
Q Consensus       324 ~~~~~~~~~~Gn~~sas~~i~L~~~~~~-~~~~G~~~~~~Gd~vll~~~G~G~~~~a~llr~~~  386 (387)
                      ..+|+++++||||+|||+|+.|++++++ +++..    .+||++++++||+|++|++++|||..
T Consensus       331 ~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~----~~gd~~ll~afG~G~s~~~~ll~~~~  390 (391)
T PLN03169        331 ECSRRALMDYGNVSSNTIVYVLEYMREELKKKGE----EDEEWGLILAFGPGITFEGILARNLT  390 (391)
T ss_pred             HHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCC----CCCcEEEEEEEcccHhHHHHHHhhhc
Confidence            9888899999999999999999999876 45410    01799999999999999999999964

>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 9e-88
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 3e-86
2p0u_A413 Crystal Structure Of Marchantia Polymorpha Stilbene 1e-85
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 2e-84
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 3e-83
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 4e-83
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 4e-83
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 4e-83
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 9e-83
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 2e-82
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 2e-82
1d6h_A387 Chalone Synthase (N336a Mutant Complexed With Coa) 3e-82
1d6i_A388 Chalcone Synthase (H303q Mutant) Length = 388 3e-82
1i88_A389 Chalcone Synthase (G256v) Length = 389 4e-82
1i8b_A389 Chalcone Synthase (g256f) Length = 389 4e-82
1i89_A389 Chalcone Synthase (G256l) Length = 389 5e-82
1jwx_A389 Chalcone Synthase--F215s Mutant Length = 389 5e-82
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 1e-78
2d51_A406 Pentaketide Chromone Synthase (M207g Mutant) Length 2e-78
3a5s_A387 Benzalacetone Synthase (I207lL208F) Length = 387 1e-77
2d3m_A406 Pentaketide Chromone Synthase Complexed With Coenzy 2e-77
3a5q_A387 Benzalacetone Synthase From Rheum Palmatum Length = 1e-76
1xes_A413 Crystal Structure Of Stilbene Synthase From Pinus S 2e-76
1u0u_A397 An Aldol Switch Discovered In Stilbene Synthases Me 3e-76
3ov2_A393 Curcumin Synthase 1 From Curcuma Longa Length = 393 6e-76
3ov3_A393 G211f Mutant Of Curcumin Synthase 1 From Curcuma Lo 8e-75
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 2e-71
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 3e-71
2h84_A374 Crystal Structure Of The C-terminal Type Iii Polyke 4e-42
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 2e-30
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 2e-30
3e1h_A465 Crystal Structure Of A Type Iii Polyketide Synthase 1e-26
3euq_A379 X-Ray Structural Of A Type Iii Pentaketide Synthase 1e-26
3euo_A379 Crystal Structure Of A Fungal Type Iii Polyketide S 2e-25
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 4e-22
2ebd_A309 Crystal Structure Of 3-oxoacyl-[acyl-carrier-protei 1e-04
1mzj_A339 Crystal Structure Of The Priming Beta-Ketosynthase 5e-04
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure 
Iteration: 1

 Score =  320 bits (820), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 166/377 (44%), Positives = 241/377 (63%), Gaps = 5/377 (1%)
Query: 14  GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSD 72
           G ATILA+G + P  +  Q    D +F  TNC+D  ELK+K  R+C  + +K R+  ++D
Sbjct: 28  GPATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLTD 87
Query: 73  EILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSE 132
           EIL+K P +      ++  R DI    V ++A EA+ + IK WG+P + ITH+V+ ++S 
Sbjct: 88  EILRKNPSICKFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG 147
Query: 133 ARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETT 192
             +PG D  LA+ LGL P  +RVMLY  G   G + LRVAKD+AENN G+RVL+A SE T
Sbjct: 148 VDMPGADFQLAKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEVT 207
Query: 193 IIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS-ERPLFELHTAIQNFLPNTEKTI 251
            + F+ PS      LVG ALFGDGA A+IVGSDPVP  E+PLFE+H A +  LP+++  I
Sbjct: 208 AVTFRAPSETHLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPDSDGAI 267
Query: 252 DGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILNK 311
           +G L E G+ F L +++P +I  NI+    + +  + F +  YN MFWAVHPGGPAIL++
Sbjct: 268 NGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPS--YNDMFWAVHPGGPAILDQ 325
Query: 312 LEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMK-SQDHEDTDWGLILA 370
           +E +L L  DK+ ASR  L  YGN SS ++++VL+ + + S ++      E  +WG ++ 
Sbjct: 326 IEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIG 385
Query: 371 FGPGITFEGILARNLTV 387
           FGPG+T E +L R++ +
Sbjct: 386 FGPGLTVETLLLRSINI 402
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 Back     alignment and structure
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 Back     alignment and structure
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 Back     alignment and structure
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 Back     alignment and structure
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 Back     alignment and structure
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 Back     alignment and structure
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 Back     alignment and structure
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 Back     alignment and structure
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa Length = 393 Back     alignment and structure
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa Length = 393 Back     alignment and structure
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pksiiinc From Neurospora Crassa Length = 465 Back     alignment and structure
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From Neurospora Crassa Length = 379 Back     alignment and structure
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide Synthase, Oras Length = 379 Back     alignment and structure
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure
>pdb|2EBD|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein] Synthase Iii From Aquifex Aeolicus Vf5 Length = 309 Back     alignment and structure
>pdb|1MZJ|A Chain A, Crystal Structure Of The Priming Beta-Ketosynthase From The R1128 Polyketide Biosynthetic Pathway Length = 339 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query387
3oit_A387 OS07G0271500 protein; type III polyketide synthase 1e-142
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 1e-140
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 1e-138
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 1e-137
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 1e-136
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 1e-135
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 1e-134
1u0m_A382 Putative polyketide synthase; type III polyketide 1e-133
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 1e-133
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 1e-132
3awk_A402 Chalcone synthase-like polyketide synthase; type I 1e-131
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 1e-130
1xes_A413 Dihydropinosylvin synthase; native structure, tran 1e-130
3v7i_A413 Putative polyketide synthase; type III polyketide 1e-122
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 1e-118
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 1e-117
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 9e-12
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 2e-09
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 9e-09
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 3e-08
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 3e-08
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 6e-08
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 2e-07
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 2e-07
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 2e-07
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 5e-07
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 1e-06
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 1e-06
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 3e-06
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 7e-06
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 1e-05
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 1e-05
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 1e-05
2p8u_A 478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 4e-04
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
 Score =  408 bits (1049), Expect = e-142
 Identities = 148/375 (39%), Positives = 221/375 (58%), Gaps = 4/375 (1%)

Query: 12  SPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVM 70
           + G A +LA+G A P   V QE + D YF+ TN D    LK K  R+C+   V+ RY+  
Sbjct: 7   ADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHH 66

Query: 71  SDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSS 130
           ++E+L  +PE      P++  RLDI   AV ++A EA++  I  WGRP  DITH+V  ++
Sbjct: 67  TEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTN 126

Query: 131 SEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSE 190
           S A +PG D  L   LGL P  +R ML+  GC  G + LR+AKD+AEN+ G+RVL+  +E
Sbjct: 127 SGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAE 186

Query: 191 TTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSERPLFELHTAIQNFLPNTEKT 250
            T++ F  P       L+   LFGDGA A+IVG+D    ERPLFE+ +A Q  +P ++  
Sbjct: 187 LTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLFEIVSAAQTIIPESDHA 246

Query: 251 IDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNN--DYNKMFWAVHPGGPAI 308
           ++ R TE  +   L R++P +I DN+E     + G +   +    +N +FWAVHPG   I
Sbjct: 247 LNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTI 306

Query: 309 LNKLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLI 368
           +++++  L L P KL ASRR L DYGN S  T+++ L+ +  +  K  +   E  + G++
Sbjct: 307 MDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQR-KEAAAAGEWPELGVM 365

Query: 369 LAFGPGITFEGILAR 383
           +AFGPG+T + +L  
Sbjct: 366 MAFGPGMTVDAMLLH 380
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.96
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.88
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.87
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.86
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.86
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.86
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.86
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.84
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.84
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.84
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.83
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.83
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.83
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.81
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.81
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.8
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.79
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.79
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.78
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.78
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.78
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.78
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.77
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.77
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.76
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.76
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.75
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.74
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.74
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.73
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.73
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.71
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.67
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.59
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 99.43
4egv_A520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.36
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 99.12
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 98.81
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 98.65
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 98.56
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 93.52
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 93.5
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 93.35
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 93.22
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 93.03
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 93.01
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 92.91
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 92.58
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 92.58
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 92.36
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 92.24
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 92.22
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 91.41
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 91.3
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 90.95
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 89.25
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 88.83
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 88.09
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 87.09
1u0m_A382 Putative polyketide synthase; type III polyketide 86.99
3v7i_A 413 Putative polyketide synthase; type III polyketide 84.5
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 84.14
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 83.58
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 83.23
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 80.57
4egv_A520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 80.16
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
Probab=100.00  E-value=3.7e-64  Score=494.86  Aligned_cols=373  Identities=38%  Similarity=0.695  Sum_probs=328.1

Q ss_pred             cccCCCCceEEEEeeecCCCcccchhhHHHHHHhccC-CCChHHHHHHHHHHhhcCccceeeecchhhhhhCcccccCCC
Q 016569            8 ANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTN-CDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGL   86 (387)
Q Consensus         8 ~~~~~~~~~~I~g~g~~lP~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~~~~~~~~~~   86 (387)
                      ++.+++++++|.|+|+|+|+++++|+|+.+.++.... ++|++++++.++|.+++||++||++.+++.+..+|++.++..
T Consensus         9 ~~~~~~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~   88 (393)
T 3ov2_A            9 REQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYKE   88 (393)
T ss_dssp             HHHSCSSCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSSS
T ss_pred             cccCCCCCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCCC
Confidence            3557889999999999999999999999998754443 345677788899999999999999999887788899999999


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEEccCCCCCCCHHHHHHHHcCCCCccccceeecccchhhH
Q 016569           87 PTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGV  166 (387)
Q Consensus        87 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~g~~  166 (387)
                      |++++|++.|.++..+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.++++++++|+|++
T Consensus        89 p~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~  168 (393)
T 3ov2_A           89 ASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGA  168 (393)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHH
Confidence            99999999999999999999999999999999999999999999998899999999999999987523799999999999


Q ss_pred             HHHHHHHHHHHcCCCCeEEEEeecccccCCCCCCCCCCcccchhhhccccceEEEEecCCCCC-CCCceEEEeeeeeecc
Q 016569          167 SGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS-ERPLFELHTAIQNFLP  245 (387)
Q Consensus       167 ~al~~A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~~~GDGAaA~vl~~~~~~~-~~~~~~l~~~~~~~~p  245 (387)
                      .||.+|.++|++|+.++||||++|.+|..+.+|.++.+.++.+..+|||||+|+||++++... ..+.+++...++..+|
T Consensus       169 ~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~~~~~~~~~~p  248 (393)
T 3ov2_A          169 AMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIAAAMQETVA  248 (393)
T ss_dssp             HHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCCTTTCCCSEEEEEEEEEECT
T ss_pred             HHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCCCcccCceeEEEecCcEEec
Confidence            999999999999999999999999998556666653212245789999999999999876532 2245788877777889


Q ss_pred             CccccccceeecCceEEEECCchhHHHHHhHHHHHHHhhhhcCCCCCCC-CceEEEEcCCCHHHHHHHHHHcCCCccccH
Q 016569          246 NTEKTIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDY-NKMFWAVHPGGPAILNKLEKRLNLLPDKLN  324 (387)
Q Consensus       246 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~did~-~di~~i~hq~~~~~~~~~~~~lgi~~e~~~  324 (387)
                      .+.+.+.|.+.++|+.|.+++++|+++.+.++++++++|+++|++   . +|++|++||+|.++++.++++||+|++|+.
T Consensus       249 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~---~~~di~~v~Hq~n~~i~~~v~~~Lgl~~ek~~  325 (393)
T 3ov2_A          249 ESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVR---EWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLS  325 (393)
T ss_dssp             TCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCC---SGGGSEEEECCCCHHHHHHHHHHHTCCTTTTH
T ss_pred             CCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCC---cccCcEEEECCCChHHHHHHHHHcCCCHHHHH
Confidence            887777788888888888899999999999999999999999998   6 667899999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCcchHHHHHHHHHHh-----hhcccCCCCCCCCeEEEEeeccchhhhhhhhccccC
Q 016569          325 ASRRALMDYGNASSNTIVYVLEYMLEE-----SLKMKSQDHEDTDWGLILAFGPGITFEGILARNLTV  387 (387)
Q Consensus       325 ~~~~~~~~~Gn~~sas~~i~L~~~~~~-----~~~~G~~~~~~Gd~vll~~~G~G~~~~a~llr~~~~  387 (387)
                      .+|+++++||||++||+|++|++++++     ++++|.    ++|+|+|++||+|++|++++|||.|.
T Consensus       326 ~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~----~~d~vll~~fG~G~t~~~~ll~~~~~  389 (393)
T 3ov2_A          326 TARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGD----GLQWGVLLGFGPGLSIETVVLRSMPL  389 (393)
T ss_dssp             HHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTT----TCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred             HHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCC----CCCeEEEEEECccceeeeeeeEEccc
Confidence            989999999999999999999999875     344420    01999999999999999999999874
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 387
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 2e-77
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 7e-60
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 4e-45
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 2e-42
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 4e-42
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 6e-41
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 2e-28
d1xpma1166 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA 5e-10
d1u6ea1184 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa 6e-09
d1mzja1181 c.95.1.2 (A:3-183) Priming beta-ketosynthase from 2e-07
d1ub7a1172 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH 7e-07
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 9e-07
d1hnja1174 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH 1e-06
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 3e-05
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 3e-04
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 0.003
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  241 bits (615), Expect = 2e-77
 Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 15/371 (4%)

Query: 13  PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSD 72
              A I  L    P ++V Q    D         DP  ++++ R+ + + + TR + +  
Sbjct: 9   TTVAVIEGLATGTPRRVVNQSDAADRVA--ELFLDPGQRERIPRVYQKSRITTRRMAV-- 64

Query: 73  EILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSE 132
           + L    ++      T++ R+ +  +    +A++ S+  +        +I  +V  +S+ 
Sbjct: 65  DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG 124

Query: 133 ARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETT 192
              PG D+ + + LGLSP   RV++ FMGC+  ++ L  A +    +P  + L+   E  
Sbjct: 125 FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELC 184

Query: 193 IIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPS--ERPLFELHTAIQNFLPNTEKT 250
            +      A+   D+V  +LFGDG  A+++G+  V    E     + ++    L NTE  
Sbjct: 185 SVNA--VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDG 242

Query: 251 IDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKMFWAVHPGGPAILN 310
           I   +   GI+ +L+  LP  I   +     +++ + G   +D +   WA+HPGGP I+ 
Sbjct: 243 IVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDID--LWAIHPGGPKIIE 300

Query: 311 KLEKRLNLLPDKLNASRRALMDYGNASSNTIVYVLEYMLEESLKMKSQDHEDTDWGLILA 370
           +  + L +  +    S   L  +GN  S ++++VLE M++++   K+        G+  A
Sbjct: 301 QSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAI-----STGVAFA 355

Query: 371 FGPGITFEGIL 381
           FGPG+T EG+L
Sbjct: 356 FGPGVTVEGML 366
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166 Back     information, alignment and structure
>d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184 Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 181 Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 172 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 174 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query387
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 100.0
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 100.0
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 100.0
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 100.0
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.97
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.96
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.96
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.95
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.94
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.91
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.91
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.9
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.9
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 99.34
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 99.28
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 99.27
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 99.2
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 99.09
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 99.05
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.96
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.83
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.74
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.73
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.72
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.51
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 98.32
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 97.32
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 97.29
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 96.57
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 96.54
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 96.21
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 95.56
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 95.17
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 95.1
d1e5ma2161 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 92.76
d1j3na2159 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 92.05
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 92.01
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 91.64
d1ox0a2158 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 90.96
d2gfva2161 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 90.75
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 90.2
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 87.43
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 87.24
d1teda_ 372 Polyketide synthase PKS18 {Mycobacterium tuberculo 86.06
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 83.46
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 80.05
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.9e-59  Score=455.64  Aligned_cols=357  Identities=24%  Similarity=0.415  Sum_probs=298.1

Q ss_pred             CCceEEEEeeecCCCcccchhhHHHHHHhccCCCChHHHHHHHHHHhhcCccceeeecchhhhhhCcccccCCCCCHHHH
Q 016569           13 PGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDPELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQR   92 (387)
Q Consensus        13 ~~~~~I~g~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~e~~~~~~~~~~~~~~~~~~~   92 (387)
                      ....+|.|+|+|+|+++++|+|+.+.+.+....  +...++..+|++++||++||++.++.  +..+++..+..|++.+|
T Consensus         9 ~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~--~~~~~~~~ri~~~tGI~~R~~~~~~~--~~~~~~~~~~~~~~~~r   84 (372)
T d1teda_           9 TTVAVIEGLATGTPRRVVNQSDAADRVAELFLD--PGQRERIPRVYQKSRITTRRMAVDPL--DAKFDVFRREPATIRDR   84 (372)
T ss_dssp             CCEEEEEEEEEECCSCEEEHHHHHHHHHTC------CCTTHHHHHHHTSCCSEEECSSCTT--STTHHHHTTCSSCHHHH
T ss_pred             CceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCC--hHHHHHHHHHHHccCCcccceecccc--ccchhhhhhcCCCHHHH
Confidence            345789999999999999999999987543221  22344577899999999999987542  23344555567899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCCCCccEEEEEccCCCCCCCHHHHHHHHcCCCCccccceee-cccchhhHHHHHH
Q 016569           93 LDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLY-FMGCSGGVSGLRV  171 (387)
Q Consensus        93 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~LGl~~~~~~~~~~-~~~C~g~~~al~~  171 (387)
                      +..+.+++.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++. .+++ +.||+|++.||++
T Consensus        85 ~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~~~~~~gC~g~~~aL~~  163 (372)
T d1teda_          85 MHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNALGT  163 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHHH
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCcee-EeeccccCccHHHHHHHH
Confidence            9999999999999999999999999999999999999988999999999999999998763 5666 4699999999999


Q ss_pred             HHHHHHcCCCCeEEEEeecccccCCCCCCCCCCcccchhhhccccceEEEEecCCCCCC--CCceEEEeeeeeeccCccc
Q 016569          172 AKDIAENNPGSRVLLATSETTIIGFKPPSAERPYDLVGVALFGDGAGAMIVGSDPVPSE--RPLFELHTAIQNFLPNTEK  249 (387)
Q Consensus       172 A~~ll~~g~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~~~GDGAaA~vl~~~~~~~~--~~~~~l~~~~~~~~p~~~~  249 (387)
                      |..+|++|+.++||||++|.++..++...+  +.+....++|||||+|+||++++....  ...+.+.+..+...|.+.+
T Consensus       164 A~~~l~sg~~~~~LVV~~E~~s~~~~~~d~--~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (372)
T d1teda_         164 ATNYVRAHPAMKALVVCIELCSVNAVFADD--INDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTED  241 (372)
T ss_dssp             HHHHHHHSTTCEEEEEEEEECGGGCCCCSS--HHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCTT
T ss_pred             HHHHHhcCCCccceeeeehhhcccccCCCc--chhhhhhhhhcccceeEEeccCCcccccCCceeEEecccccccCCCcc
Confidence            999999999999999999998865532221  123556789999999999998765421  2233444444555677666


Q ss_pred             cccceeecCceEEEECCchhHHHHHhHHHHHHHhhhhcCCCCCCCCce-EEEEcCCCHHHHHHHHHHcCCCccccHHHHH
Q 016569          250 TIDGRLTEEGISFKLARELPQIIEDNIEGFCGKLMGNIGFTNNDYNKM-FWAVHPGGPAILNKLEKRLNLLPDKLNASRR  328 (387)
Q Consensus       250 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~did~~di-~~i~hq~~~~~~~~~~~~lgi~~e~~~~~~~  328 (387)
                      ...+.+.+.++.+..++++++.+.+.+.++++++|+++|++   ++|| +|++||+|.++++.+.+.||++++|+..+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~---~~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~  318 (372)
T d1teda_         242 GIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQ---ISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWD  318 (372)
T ss_dssp             SEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCC---GGGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHH
T ss_pred             ccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCC---HHHhhhhhccCccHHHHHHHHHHcCCCHHHhhhhHH
Confidence            66666777777777789999999999999999999999999   5555 9999999999999999999999999988888


Q ss_pred             HHhhcCCCCcchHHHHHHHHHHh-hhcccCCCCCCCCeEEEEeeccchhhhhhhhccc
Q 016569          329 ALMDYGNASSNTIVYVLEYMLEE-SLKMKSQDHEDTDWGLILAFGPGITFEGILARNL  385 (387)
Q Consensus       329 ~~~~~Gn~~sas~~i~L~~~~~~-~~~~G~~~~~~Gd~vll~~~G~G~~~~a~llr~~  385 (387)
                      ++++|||++|||+|++|++++++ ++.+|      ||++++++||+|++|+++||++.
T Consensus       319 ~l~~~GN~~sasip~~L~~~l~~g~~~~g------~d~vll~~fG~G~s~~~~ll~~~  370 (372)
T d1teda_         319 VLARFGNMLSVSLIFVLETMVQQAESAKA------ISTGVAFAFGPGVTVEGMLFDII  370 (372)
T ss_dssp             HHHHHCBCTHHHHHHHHHHHHHSCSSSSS------SEEEEEEEEETTTEEEEEEEEEC
T ss_pred             HHhccCCcHHHHHHHHHHHHHHhCCCCCC------CCEEEEEEEcHHHhHHHHhheee
Confidence            99999999999999999999998 66665      69999999999999999999975
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure