Citrus Sinensis ID: 016733

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVDITSSPVDVFSLNANEADDSLAAII
cccccccccccccccccccccccccEEccccccccccccEEEEccccccccccEEEEccccEEEEEEEcccHHHHHHHHHHcccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEccEEEEEEcccccEEEEEEcccccccccEEEEccccccccccHHHHHHHHHHccccccEEEEEccEEEEEccEEccccccccccccccccccccccccccccccccccEEEEEEEEEEEEcccccEEEEEcccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccEEEEEEccccccccccccccccccccccccccccccccccccHHHcccc
ccHHcccccccccccccccccccEEEEccccccccccEEHHHHcccHHHHHHcEccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHcHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccEEEEEEEEccEEEEEEcccccEEEEEcccEcccccEEEEEEcccccccccHHHHHHHHHHccccccEEEEEcccEEEEEEEEEEHcHcHHHHcccHccccccHHHccccccccccEEEccccEEEEEcccccEEEEEEcccHHHHcccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccc
mlemcarplercfgrgdggggdglLWHMdlkshasgdYSIAVVQANSmledqgqvftspsatyvgvydghggpeasRFITrhlfpflhiseftteqggLSAEVIKKAFDATEEEFLHLVKRswsarpqiasvgscclvgVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVealhpddshivVFSRGVWRIKGIIQVSrsigdvylkkpefsrdhgfhhfrlpiplkravmtaEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLdhplgtsssrikdhclvditsspvdvfslnaneaddsLAAII
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGdsravlgrrvsenrknMLVVaerlsvdhnvgVEEVRKevealhpddshivvfsrgvwrikGIIQVSRSIGDVYLKKPEFSRDHGfhhfrlpiplkrAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIvsrnprsgiakRLVRAALQAAARKREMRYEDIKRiqkgarrhfhddITVVVIYLDHPLGTSSSRIKDHCLVDITSSpvdvfslnaneaddslaaii
MLEMCARPLERCFgrgdggggdgLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIakrlvraalqaaarkrEMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVDITSSPVDVFSLNANEADDSLAAII
********LERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVDITSSPVDVFSL*************
*LEMC*********************HMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISE******GLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRS*I***L**AALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIY*******************************************
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVDITSSPVDVFSLNANEADDSLAAII
MLEMCARPLER********GGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHP***************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVDITSSPVDVFSLNANEADDSLAAII
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query384 2.2.26 [Sep-21-2011]
O81760380 Probable protein phosphat yes no 0.966 0.976 0.689 1e-144
Q2QN36392 Probable protein phosphat yes no 0.968 0.948 0.682 1e-139
Q94H98380 Probable protein phosphat no no 0.963 0.973 0.579 1e-125
Q5MFV5380 Probable protein phosphat N/A no 0.963 0.973 0.579 1e-125
Q8H063392 Probable protein phosphat no no 0.932 0.913 0.597 1e-120
Q9FKX4385 Probable protein phosphat no no 0.861 0.859 0.568 1e-111
Q7XUC5388 Probable protein phosphat no no 0.846 0.837 0.598 1e-111
Q9SD12379 Probable protein phosphat no no 0.833 0.844 0.558 1e-110
Q84JD5393 Probable protein phosphat no no 0.893 0.872 0.554 1e-108
Q10S32399 Probable protein phosphat no no 0.854 0.822 0.560 1e-108
>sp|O81760|P2C63_ARATH Probable protein phosphatase 2C 63 OS=Arabidopsis thaliana GN=At4g33920 PE=1 SV=1 Back     alignment and function desciption
 Score =  512 bits (1318), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/377 (68%), Positives = 298/377 (79%), Gaps = 6/377 (1%)

Query: 1   MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPS 60
           ML   ARPLERC G      GDGLLW  +L+ HA GDYSIAVVQANS LEDQ QVFTS S
Sbjct: 1   MLRALARPLERCLG--SRASGDGLLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSS 58

Query: 61  ATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVK 120
           ATYVGVYDGHGGPEASRF+ RHLFP++H  +F  E GGLS +VIKKAF  TEEEF  +VK
Sbjct: 59  ATYVGVYDGHGGPEASRFVNRHLFPYMH--KFAREHGGLSVDVIKKAFKETEEEFCGMVK 116

Query: 121 RSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDH 180
           RS   +PQ+A+VGSCCLVG I+ D LYVANLGDSRAVLG  VS    N   VAERLS DH
Sbjct: 117 RSLPMKPQMATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDH 176

Query: 181 NVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHF 240
           NV VEEVRKEV+AL+PDDS IV+++RGVWRIKGIIQVSRSIGDVYLKKPE+ RD  F   
Sbjct: 177 NVAVEEVRKEVKALNPDDSQIVLYTRGVWRIKGIIQVSRSIGDVYLKKPEYYRDPIFQRH 236

Query: 241 RLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIAKR 300
             PIPL+R  MTAEPSI++RKLK  DLFLIFASDGLWE LSDE AVEIV ++PR+GIA+R
Sbjct: 237 GNPIPLRRPAMTAEPSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARR 296

Query: 301 LVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVD 360
           LVRAAL+ AA+KREMRY DIK+I KG RRHFHDDI+V+V+YLD    TSSS  K      
Sbjct: 297 LVRAALEEAAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQN-KTSSSNSKLVKQGG 355

Query: 361 ITSSPVDVFSLNANEAD 377
           IT+ P D++SL+++EA+
Sbjct: 356 ITAPP-DIYSLHSDEAE 371

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q2QN36|P2C78_ORYSJ Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1 Back     alignment and function description
>sp|Q94H98|P2C34_ORYSJ Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1 Back     alignment and function description
>sp|Q5MFV5|P2C34_ORYSI Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2 Back     alignment and function description
>sp|Q8H063|P2C29_ORYSJ Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1 Back     alignment and function description
>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUC5|P2C43_ORYSJ Probable protein phosphatase 2C 43 OS=Oryza sativa subsp. japonica GN=Os04g0584300 PE=2 SV=2 Back     alignment and function description
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q84JD5|P2C68_ARATH Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1 Back     alignment and function description
>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query384
296087354384 unnamed protein product [Vitis vinifera] 0.984 0.984 0.768 1e-171
147769815453 hypothetical protein VITISV_032082 [Viti 0.947 0.803 0.777 1e-166
224071253370 predicted protein [Populus trichocarpa] 0.963 1.0 0.765 1e-165
225428926381 PREDICTED: probable protein phosphatase 0.973 0.981 0.766 1e-165
296083084380 unnamed protein product [Vitis vinifera] 0.973 0.984 0.766 1e-164
224060690381 predicted protein [Populus trichocarpa] 0.989 0.997 0.760 1e-164
225438924395 PREDICTED: probable protein phosphatase 0.932 0.906 0.779 1e-163
255573107387 protein phosphatase 2c, putative [Ricinu 0.989 0.981 0.753 1e-160
147810867 688 hypothetical protein VITISV_034287 [Viti 0.955 0.533 0.732 1e-159
356575706373 PREDICTED: probable protein phosphatase 0.953 0.981 0.754 1e-158
>gi|296087354|emb|CBI33728.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/385 (76%), Positives = 332/385 (86%), Gaps = 7/385 (1%)

Query: 1   MLEMCARPLERCFGRGDGGGGDGLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPS 60
           +LE C RPLERCF     GGGD LLWH+DLK HASGDYSIAVVQANS LEDQ Q+FTSPS
Sbjct: 4   ILESCCRPLERCF---KAGGGDELLWHLDLKPHASGDYSIAVVQANSSLEDQSQIFTSPS 60

Query: 61  ATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVK 120
           ATY+GVYDGHGGPEASRFIT H+FPFLH  +F++EQGGLSAEVIKKAF+ATEEEFLHLVK
Sbjct: 61  ATYIGVYDGHGGPEASRFITNHIFPFLH--KFSSEQGGLSAEVIKKAFNATEEEFLHLVK 118

Query: 121 RSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKN--MLVVAERLSV 178
           +SW ARPQIASVGSCCLVG I+ DVLYVANLGDSRAVLGR+V+  R N   +VVAERLS 
Sbjct: 119 QSWLARPQIASVGSCCLVGAISNDVLYVANLGDSRAVLGRKVTGGRMNSSQMVVAERLST 178

Query: 179 DHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFH 238
           DHNVGVEEVRKEV ALHPDD+HIVV++RGVWRI+GIIQVSRSIGD YLKKPE SRD  F 
Sbjct: 179 DHNVGVEEVRKEVAALHPDDAHIVVYTRGVWRIRGIIQVSRSIGDFYLKKPELSRDPLFQ 238

Query: 239 HFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIA 298
            F  PIPLKR VMTAEPSI+IR LK +DLFLIFASDGLWEQLSDEAAVEIV +NPR GIA
Sbjct: 239 QFGSPIPLKRPVMTAEPSIVIRNLKPHDLFLIFASDGLWEQLSDEAAVEIVLKNPRIGIA 298

Query: 299 KRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCL 358
           KRLVRAALQ AARKREMRY+DI+RI+KG RRHFHDDITV+V+YLDH  G+ + R+KDH +
Sbjct: 299 KRLVRAALQQAARKREMRYDDIRRIEKGVRRHFHDDITVIVMYLDHAQGSPNGRLKDHGI 358

Query: 359 VDITSSPVDVFSLNANEADDSLAAI 383
           VD TS+P D+FSLN++E  +    +
Sbjct: 359 VDCTSAPADIFSLNSDETHNRFPIV 383

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147769815|emb|CAN76780.1| hypothetical protein VITISV_032082 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224071253|ref|XP_002303382.1| predicted protein [Populus trichocarpa] gi|222840814|gb|EEE78361.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225428926|ref|XP_002262649.1| PREDICTED: probable protein phosphatase 2C 63-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296083084|emb|CBI22488.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224060690|ref|XP_002300254.1| predicted protein [Populus trichocarpa] gi|222847512|gb|EEE85059.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225438924|ref|XP_002279324.1| PREDICTED: probable protein phosphatase 2C 63-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255573107|ref|XP_002527483.1| protein phosphatase 2c, putative [Ricinus communis] gi|223533123|gb|EEF34881.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147810867|emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356575706|ref|XP_003555979.1| PREDICTED: probable protein phosphatase 2C 63-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query384
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.966 0.976 0.647 2e-120
TAIR|locus:2170234393 AT5G06750 [Arabidopsis thalian 0.835 0.816 0.557 7.8e-94
TAIR|locus:2156877385 AT5G66080 [Arabidopsis thalian 0.848 0.846 0.532 1.5e-92
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.820 0.831 0.524 6.3e-92
TAIR|locus:2091265385 AT3G12620 [Arabidopsis thalian 0.843 0.841 0.523 1.4e-89
TAIR|locus:2121234400 AT4G38520 [Arabidopsis thalian 0.848 0.815 0.519 1.3e-86
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.817 0.817 0.510 6.9e-86
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.825 0.825 0.515 3.8e-85
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.833 0.864 0.491 2.5e-81
TAIR|locus:2089293493 AT3G16560 [Arabidopsis thalian 0.632 0.492 0.347 1.9e-30
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
 Identities = 244/377 (64%), Positives = 279/377 (74%)

Query:     1 MLEMCARPLERCFXXXXXXXXXXLLWHMDLKSHASGDYSIAVVQANSMLEDQGQVFTSPS 60
             ML   ARPLERC           LLW  +L+ HA GDYSIAVVQANS LEDQ QVFTS S
Sbjct:     1 MLRALARPLERCLGSRASGDG--LLWQSELRPHAGGDYSIAVVQANSRLEDQSQVFTSSS 58

Query:    61 ATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLSAEVIKKAFDATEEEFLHLVK 120
             ATYVGVYDGHGGPEASRF+ RHLFP++H  +F  E GGLS +VIKKAF  TEEEF  +VK
Sbjct:    59 ATYVGVYDGHGGPEASRFVNRHLFPYMH--KFAREHGGLSVDVIKKAFKETEEEFCGMVK 116

Query:   121 RSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDH 180
             RS   +PQ+A+VGSCCLVG I+ D LYVANLGDSRAVLG  VS    N   VAERLS DH
Sbjct:   117 RSLPMKPQMATVGSCCLVGAISNDTLYVANLGDSRAVLGSVVSGVDSNKGAVAERLSTDH 176

Query:   181 NVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHF 240
             NV VEEVRKEV+AL+PDDS IV+++RGVWRIKGIIQVSRSIGDVYLKKPE+ RD  F   
Sbjct:   177 NVAVEEVRKEVKALNPDDSQIVLYTRGVWRIKGIIQVSRSIGDVYLKKPEYYRDPIFQRH 236

Query:   241 RLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSRNPRSGIXXX 300
               PIPL+R  MTAEPSI++RKLK  DLFLIFASDGLWE LSDE AVEIV ++PR+GI   
Sbjct:   237 GNPIPLRRPAMTAEPSIIVRKLKPQDLFLIFASDGLWEHLSDETAVEIVLKHPRTGIARR 296

Query:   301 XXXXXXXXXXXXXEMRYEDIKRIQKGARRHFHDDITVVVIYLDHPLGTSSSRIKDHCLVD 360
                          EMRY DIK+I KG RRHFHDDI+V+V+YLD    TSSS  K      
Sbjct:   297 LVRAALEEAAKKREMRYGDIKKIAKGIRRHFHDDISVIVVYLDQNK-TSSSNSKLVKQGG 355

Query:   361 ITSSPVDVFSLNANEAD 377
             IT+ P D++SL+++EA+
Sbjct:   356 ITAPP-DIYSLHSDEAE 371
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0010200 "response to chitin" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089293 AT3G16560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5MFV5P2C34_ORYSI3, ., 1, ., 3, ., 1, 60.57930.96350.9736N/Ano
O81760P2C63_ARATH3, ., 1, ., 3, ., 1, 60.68960.96610.9763yesno
Q2QN36P2C78_ORYSJ3, ., 1, ., 3, ., 1, 60.68240.96870.9489yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query384
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-56
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-52
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-33
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 4e-22
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-17
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 6e-11
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  184 bits (470), Expect = 2e-56
 Identities = 93/302 (30%), Positives = 130/302 (43%), Gaps = 72/302 (23%)

Query: 50  EDQGQVFT---SPSATYVGVYDGHGGPEASRFITRHLFPFL--HISEFTTEQGGLSAEVI 104
           ED   +     +      GV+DGHGG  A  F ++ L   L   + E  T       E +
Sbjct: 16  EDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEAL 75

Query: 105 KKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSE 164
           +KAF   +EE L   +      P  A  G+  +V +I  + LYVAN+GDSRAVL R    
Sbjct: 76  RKAFLRADEEILEEAQD----EPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG-- 129

Query: 165 NRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDV 224
                   A +L+ DH    EE R+ +E      S          R+ G++ V+R++GD 
Sbjct: 130 -------EAVQLTKDHKPVNEEERERIEKAGGRVS--------NGRVPGVLAVTRALGDF 174

Query: 225 YLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEA 284
            LK                       ++AEP + + KL  +D FLI ASDGLW+ LS++ 
Sbjct: 175 DLKPG---------------------VSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQE 213

Query: 285 AVEIVSRNPRSG----IAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVVVI 340
           AV+IV            A+ LV  AL                     RR  HD+ITVVV+
Sbjct: 214 AVDIVRSELAKEDLQEAAQELVDLAL---------------------RRGSHDNITVVVV 252

Query: 341 YL 342
            L
Sbjct: 253 RL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 384
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.93
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.93
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.77
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.71
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.69
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.51
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.33
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.28
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=2.4e-51  Score=393.39  Aligned_cols=296  Identities=50%  Similarity=0.808  Sum_probs=263.8

Q ss_pred             CCCCceEeecCCCCcccCcceeeecCCc-------ccccceeee--cCCCceEEEEEcCCChhHHHHHHHHhhhhhhhc-
Q 016733           20 GGDGLLWHMDLKSHASGDYSIAVVQANS-------MLEDQGQVF--TSPSATYVGVYDGHGGPEASRFITRHLFPFLHI-   89 (384)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~-------~~ED~~~~~--~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~-   89 (384)
                      ..+++.|.++...+..|++++++.+.+.       .-||+..+.  ...++.|+||||||||..+++|++++|..++.. 
T Consensus        49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~  128 (390)
T KOG0700|consen   49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE  128 (390)
T ss_pred             CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence            4578999999999999999999888754       455665444  256678999999999999999999999998760 


Q ss_pred             --c-------ccccc--------------------c-CCCcHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCceEEEE
Q 016733           90 --S-------EFTTE--------------------Q-GGLSAEVIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVG  139 (384)
Q Consensus        90 --~-------~~~~~--------------------~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~  139 (384)
                        .       .+.++                    . .....++|.+||.++++.|+....+.+...+....+||||++.
T Consensus       129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~  208 (390)
T KOG0700|consen  129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG  208 (390)
T ss_pred             hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence              0       12222                    1 4556889999999999999999999999999999999999999


Q ss_pred             EEeCCeEEEEEccCCcEEEEeeecCCCccceeEEeecCCcCCCCCHHHHHHHHHhCCCCCceEEeeCCeeeecCcccccc
Q 016733          140 VIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSR  219 (384)
Q Consensus       140 ~i~~~~l~vanvGDSr~~l~r~~~~~g~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~ltR  219 (384)
                      ++.++.|||||+|||||+|.+..+.++   .|.++|||.||+..++.|++||...||....+++..+  ||+.|.|++||
T Consensus       209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~---~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsR  283 (390)
T KOG0700|consen  209 LIKGGDLYVANVGDSRAVLGVVENNGS---WLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSR  283 (390)
T ss_pred             EEeCCeEEEEecCcchhhhceecCCCC---eEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeee
Confidence            999999999999999999988884333   4799999999999999999999999999989888887  89999999999


Q ss_pred             ccccccccCCCCCCCCCCcccccCCCCCCceeeccccEEEEEcCCCCeEEEEeeCCCccCCCHHHHHHHHHc-----CCC
Q 016733          220 SIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSDEAAVEIVSR-----NPR  294 (384)
Q Consensus       220 alGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~~LiLaSDGl~d~l~~~ei~~iv~~-----~~~  294 (384)
                      ||||..+|++.+++.+++..|..+-..++|+|+++|+++.++|.+.|+|||||||||||+|+++|++.+|..     .+.
T Consensus       284 AfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd  363 (390)
T KOG0700|consen  284 AFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPD  363 (390)
T ss_pred             eccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999     678


Q ss_pred             chHHHHHHHHHHHHHHHhhhhhhhHH
Q 016733          295 SGIAKRLVRAALQAAARKREMRYEDI  320 (384)
Q Consensus       295 ~~~a~~L~~~Al~~~~~~~~~~~~~~  320 (384)
                      +++|+.|++.|+..++++..++|+++
T Consensus       364 ~~~A~hLIr~aL~~aakk~~~r~s~l  389 (390)
T KOG0700|consen  364 GNPATHLIRHALGRAAKKRGMRLSDL  389 (390)
T ss_pred             CCHHHHHHHHHHhhhhhhccccHhhc
Confidence            89999999999999998887777653

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query384
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-15
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-15
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 6e-15
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 9e-13
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-12
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-12
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 5e-12
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 8e-11
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-10
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 1e-10
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-10
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-10
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-10
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 4e-10
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 6e-10
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 7e-10
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-08
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 3e-08
2pom_A372 Tab1 With Manganese Ion Length = 372 6e-08
2j4o_A401 Structure Of Tab1 Length = 401 9e-08
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-06
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 118/249 (47%), Gaps = 42/249 (16%)
Query: 45  ANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQGGLS--AE 102
           + SML+  G+     +A + GVYDGHGG + + +    +   L   E   E+  LS    
Sbjct: 38  SGSMLD--GRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLAL-AEEIAKEKPMLSDGDT 94
Query: 103 VIKKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRV 162
            ++K   A    FL +     S  P+  +VGS  +V V+    ++VAN GDSRAVL R  
Sbjct: 95  WLEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK 152
Query: 163 SENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIG 222
           +         A  LSVDH    E+    +EA        V+   G  R+ G++ +SRSIG
Sbjct: 153 T---------ALPLSVDHKPDREDEAARIEAA----GGKVIQWNGA-RVFGVLAMSRSIG 198
Query: 223 DVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLSD 282
           D YL KP            +P P   AV         +++K +D  LI ASDG+W+ ++D
Sbjct: 199 DRYL-KPSI----------IPDPEVTAV---------KRVKEDDC-LILASDGVWDVMTD 237
Query: 283 EAAVEIVSR 291
           E A E+  +
Sbjct: 238 EEACEMARK 246
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query384
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 3e-74
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 8e-71
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 2e-48
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 3e-47
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 3e-47
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-46
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-46
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-45
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-45
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 3e-45
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-42
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 5e-36
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-28
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-13
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-11
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 8e-11
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 3e-10
3rnr_A211 Stage II sporulation E family protein; structural 4e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
 Score =  235 bits (600), Expect = 3e-74
 Identities = 83/376 (22%), Positives = 134/376 (35%), Gaps = 66/376 (17%)

Query: 25  LWHMDLKSHASGDYSIAVVQ---------ANSMLEDQGQVFTSPSAT-YVGVYDGHGGPE 74
            W  DL          A  +          +   ED    F S +     GV++G+ G  
Sbjct: 16  SWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNR 75

Query: 75  ASRFITRHLFPFLHISEFTTEQGGLS-AEVIKKAFDATEEEFLHLVKRSWSARPQIASV- 132
            + F+ + L   L + +   E        V+ +AFD  E  FL  +  + + +  + S  
Sbjct: 76  VTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQL 135

Query: 133 -----------------------------GSCCLVGVIAKDVLYVANLGDSRAVLGRRVS 163
                                        G+  +V V+  + LYVAN+G +RA+L +   
Sbjct: 136 PEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTV 195

Query: 164 ENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGD 223
           +  +       +L+VDH    E+    +  L  D   I      V  I G  + +R IGD
Sbjct: 196 DGLQ-----VTQLNVDHTTENEDELFRLSQLGLDAGKIK----QVGIICG-QESTRRIGD 245

Query: 224 VYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSIL-IRKLKSNDLFLIFASDGLWEQLSD 282
             +K      D       L    K   + AEP I   + L     FL+  S+GL++ L  
Sbjct: 246 YKVKYGYTDID-------LLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEA 298

Query: 283 EAAVEIVSR----NPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHF---HDDI 335
                  ++       +  AK+    A+  A   R  R         G R  F   H+D+
Sbjct: 299 AHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDM 358

Query: 336 TVVVIYLDHPLGTSSS 351
           T++V    +PLG  S 
Sbjct: 359 TLLVRNFGYPLGEMSQ 374
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query384
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.79
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.78
3f79_A255 Probable two-component response regulator; adaptor 99.61
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.59
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.11
3eq2_A394 Probable two-component response regulator; adaptor 98.23
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=2.7e-46  Score=378.92  Aligned_cols=301  Identities=27%  Similarity=0.392  Sum_probs=210.5

Q ss_pred             cceeeecCCcccccceeeec--CCCceEEEEEcCCChhHHHHHHHHhhhhhhhcc--------cc---cc----------
Q 016733           38 YSIAVVQANSMLEDQGQVFT--SPSATYVGVYDGHGGPEASRFITRHLFPFLHIS--------EF---TT----------   94 (384)
Q Consensus        38 ~~~~~~~~r~~~ED~~~~~~--~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~--------~~---~~----------   94 (384)
                      |.....+.|..|||++.+..  ..++.||||||||||+.+|++++++++.+|...        .+   ..          
T Consensus        41 ~~s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~  120 (467)
T 2pnq_A           41 FDSNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQ  120 (467)
T ss_dssp             EEEEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEE
T ss_pred             EEeeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccccccccc
Confidence            33344456999999998763  456789999999999999999999999887511        00   00          


Q ss_pred             ------------------------------c-----cCCCcHHHHHHHHHHHHHHHHHHHHhhh------cCCCCcccCC
Q 016733           95 ------------------------------E-----QGGLSAEVIKKAFDATEEEFLHLVKRSW------SARPQIASVG  133 (384)
Q Consensus        95 ------------------------------~-----~~~~~~~~l~~a~~~~~~~l~~~~~~~~------~~~~~~~~~G  133 (384)
                                                    .     ......++|+++|..++..|........      ........+|
T Consensus       121 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~G  200 (467)
T 2pnq_A          121 WHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSG  200 (467)
T ss_dssp             ECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSE
T ss_pred             ccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCc
Confidence                                          0     1114678899999999999987653210      0011235689


Q ss_pred             ceEEEEEEeCCeEEEEEccCCcEEEEeeecCCCccceeEEeecCCcCCCCCHHHHHHHHHhCCCCCceEEeeCCeeeecC
Q 016733          134 SCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKG  213 (384)
Q Consensus       134 tT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~g~~~~~~~~~LT~dH~~~~~~e~~ri~~~~p~~~~~~~~~~g~~r~~g  213 (384)
                      ||++++++.+++||||||||||+|+++.+ .+|   .|.+++||.||++.++.|++||.+.||......+...  .|+.|
T Consensus       201 tTa~v~li~~~~l~vAnvGDSRa~l~r~~-~~g---~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~--~Rv~G  274 (467)
T 2pnq_A          201 ATACVAHVDGVDLHVANTGDSRAMLGVQE-EDG---SWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ--DRLLG  274 (467)
T ss_dssp             ECEEEEEEETTEEEEEEESSCEEEEEEEC-TTS---CEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS--SSBTT
T ss_pred             ceEEEEEEECCEEEEEECCCceEEEEEec-CCC---cEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec--Ccccc
Confidence            99999999999999999999999999973 112   5679999999999999999999999864211111112  28899


Q ss_pred             ccccccccccccccCCCC----------C--CCCCCcccccCCCCCCceeeccccEEEEEcCCCCeEEEEeeCCCccCCC
Q 016733          214 IIQVSRSIGDVYLKKPEF----------S--RDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFASDGLWEQLS  281 (384)
Q Consensus       214 ~l~ltRalGd~~~k~~~~----------~--~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~~LiLaSDGl~d~l~  281 (384)
                      .+++||||||..+|....          .  ...++..+.++...++|+|+++|++..+++.++|.|||||||||||+|+
T Consensus       275 ~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls  354 (467)
T 2pnq_A          275 LLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMH  354 (467)
T ss_dssp             TBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSC
T ss_pred             ccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCC
Confidence            999999999998875310          0  0012234455666778999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcC-------CC------------------------------chHHHHHHHHHHHHH--HHhhhhhhhHHHh
Q 016733          282 DEAAVEIVSRN-------PR------------------------------SGIAKRLVRAALQAA--ARKREMRYEDIKR  322 (384)
Q Consensus       282 ~~ei~~iv~~~-------~~------------------------------~~~a~~L~~~Al~~~--~~~~~~~~~~~~~  322 (384)
                      ++|+++++...       .+                              +++|..|++.|+..+  .+-+.-+...++.
T Consensus       355 ~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~  434 (467)
T 2pnq_A          355 RQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLS  434 (467)
T ss_dssp             HHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC-----------------
T ss_pred             hHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhc
Confidence            99999999763       12                              567999999999876  2123334567899


Q ss_pred             hhcCCCCCCCCCeEEEEEEcCC
Q 016733          323 IQKGARRHFHDDITVVVIYLDH  344 (384)
Q Consensus       323 ~~~~~~rg~~DNiTvivv~l~~  344 (384)
                      ++.+.+|.+.||||||||+|++
T Consensus       435 ~~~~~~R~~~DdITViVv~~~~  456 (467)
T 2pnq_A          435 LPEELARMYRDDITIIVVQFNS  456 (467)
T ss_dssp             --------CCSCEEEEEEEECH
T ss_pred             CCccccccCCCCcEEEEEEeCc
Confidence            9999999999999999999964
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 384
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-25
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 3e-14
d1fxza2174 b.82.1.2 (A:297-470) Seed storage 7S protein {Soyb 0.003
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 2e-25
 Identities = 56/315 (17%), Positives = 100/315 (31%), Gaps = 68/315 (21%)

Query: 37  DYSIAVVQANSMLEDQGQVFTSPSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTTEQ 96
           D   AV+   S LE            +  VYDGH G + +++   HL    HI+     +
Sbjct: 37  DAHTAVIGLPSGLESWS---------FFAVYDGHAGSQVAKYCCEHLLD--HITNNQDFK 85

Query: 97  GGLSAEVIKKAFDATEEEFLHLVKRSWS---ARPQIASVGSCCLVGVIAKDVLYVANLGD 153
           G   A  ++   +     FL + +        +      GS  +  +I+    Y  N GD
Sbjct: 86  GSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGD 145

Query: 154 SRAVLGRRVSENRKNMLVVAERLSVDHNVGVEEVRKEVEALHPDDSHIVVFSRGVWRIKG 213
           SR +L                  + DH       ++ ++                 R+ G
Sbjct: 146 SRGLL---------CRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI--------QRVNG 188

Query: 214 IIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLKSNDLFLIFAS 273
            + VSR++GD   K               P               I + + +D F+I A 
Sbjct: 189 SLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHD-----------IERSEEDDQFIILAC 237

Query: 274 DGLWEQLSDEAAVEIVSRNPRSG-----IAKRLVRAALQAAARKREMRYEDIKRIQKGAR 328
           DG+W+ + +E   + V            +   +V   L                      
Sbjct: 238 DGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCL---------------------Y 276

Query: 329 RHFHDDITVVVIYLD 343
           +   D+++V++I   
Sbjct: 277 KGSRDNMSVILICFP 291
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure
>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean (Glycine max), proglycinin [TaxId: 3847]} Length = 174 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query384
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-47  Score=362.67  Aligned_cols=257  Identities=21%  Similarity=0.362  Sum_probs=205.8

Q ss_pred             cCcceeeecC-CcccccceeeecC-----CCceEEEEEcCCChhHHHHHHHHhhhhhhhcccccc-ccCC----CcHHHH
Q 016733           36 GDYSIAVVQA-NSMLEDQGQVFTS-----PSATYVGVYDGHGGPEASRFITRHLFPFLHISEFTT-EQGG----LSAEVI  104 (384)
Q Consensus        36 ~~~~~~~~~~-r~~~ED~~~~~~~-----~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~-~~~~----~~~~~l  104 (384)
                      .+|.++..|| |+.|||++.+...     ++..||||||||||+.+|++++++|+..|.+..... ....    ...++|
T Consensus        21 ~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al  100 (295)
T d1a6qa2          21 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGI  100 (295)
T ss_dssp             EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHH
T ss_pred             eEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHH
Confidence            4566667666 8899999987632     335799999999999999999999999987221111 1111    234566


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCcccCCceEEEEEEeCCeEEEEEccCCcEEEEeeecCCCccceeEEeecCCcCCCCC
Q 016733          105 KKAFDATEEEFLHLVKRSWSARPQIASVGSCCLVGVIAKDVLYVANLGDSRAVLGRRVSENRKNMLVVAERLSVDHNVGV  184 (384)
Q Consensus       105 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vanvGDSr~~l~r~~~~~g~~~~~~~~~LT~dH~~~~  184 (384)
                      +++|..+++.+....    ........+|||++++++.++++|++||||||+|+++++         .+++||.||++.+
T Consensus       101 ~~a~~~~~~~~~~~~----~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~---------~~~~lT~dH~~~~  167 (295)
T d1a6qa2         101 RTGFLEIDEHMRVMS----EKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------KVHFFTQDHKPSN  167 (295)
T ss_dssp             HHHHHHHHHHHHHHH----HHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT---------EEEEECCCCCTTS
T ss_pred             HHHHHHHHHHHhhhh----hhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc---------cceeeccccCccc
Confidence            777777776665543    233345678999999999999999999999999999988         8999999999999


Q ss_pred             HHHHHHHHHhCCCCCceEEeeCCeeeecCccccccccccccccCCCCCCCCCCcccccCCCCCCceeeccccEEEEEcC-
Q 016733          185 EEVRKEVEALHPDDSHIVVFSRGVWRIKGIIQVSRSIGDVYLKKPEFSRDHGFHHFRLPIPLKRAVMTAEPSILIRKLK-  263 (384)
Q Consensus       185 ~~e~~ri~~~~p~~~~~~~~~~g~~r~~g~l~ltRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~-  263 (384)
                      +.|++|+...+    +.+..    +|++|.|++||||||..+|....            ...+.|+|+++|++..+++. 
T Consensus       168 ~~E~~Ri~~~g----g~v~~----~r~~g~l~~tRa~Gd~~~k~~~~------------~~~~~~~v~~~Pdi~~~~~~~  227 (295)
T d1a6qa2         168 PLEKERIQNAG----GSVMI----QRVNGSLAVSRALGDFDYKCVHG------------KGPTEQLVSPEPEVHDIERSE  227 (295)
T ss_dssp             HHHHHHHHHTT----CCEET----TEETTTBSCSBCEECGGGSCCTT------------CCGGGSSSBCCCEEEEEECCT
T ss_pred             HHHHhhHhhcC----Ccccc----cccCCceeeeeccCcHHhhhccc------------cCcccccccccccceEEEeec
Confidence            99999999985    33322    38899999999999999986552            33456789999999999986 


Q ss_pred             CCCeEEEEeeCCCccCCCHHHHHHHHHc-----CCCchHHHHHHHHHHHHHHHhhhhhhhHHHhhhcCCCCCCCCCeEEE
Q 016733          264 SNDLFLIFASDGLWEQLSDEAAVEIVSR-----NPRSGIAKRLVRAALQAAARKREMRYEDIKRIQKGARRHFHDDITVV  338 (384)
Q Consensus       264 ~~D~~LiLaSDGl~d~l~~~ei~~iv~~-----~~~~~~a~~L~~~Al~~~~~~~~~~~~~~~~~~~~~~rg~~DNiTvi  338 (384)
                      ++|.|||||||||||+|+++|+++++..     .+++.+|++|++.|+.                     |++.||||||
T Consensus       228 ~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~---------------------~gs~DNiTvi  286 (295)
T d1a6qa2         228 EDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY---------------------KGSRDNMSVI  286 (295)
T ss_dssp             TTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH---------------------TTCCSCEEEE
T ss_pred             ccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh---------------------cCCCCCeEEE
Confidence            5567999999999999999999999975     2456789999999987                     4479999999


Q ss_pred             EEEcCCCC
Q 016733          339 VIYLDHPL  346 (384)
Q Consensus       339 vv~l~~~~  346 (384)
                      ||+|+..+
T Consensus       287 vv~~~~~~  294 (295)
T d1a6qa2         287 LICFPNAP  294 (295)
T ss_dssp             EEECTTSC
T ss_pred             EEeccCCC
Confidence            99998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure