Citrus Sinensis ID: 016742

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
Protein Sequence
MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPADQPVAAQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccEEEEccccccccHHHHHHHHccccEEEEEEEEEEEEEccEEEEccccEEEEccccEEEEcccEEEEEEEEEEEcccEEEcccccccccEEEccccccEEEEcccccccccccEEEEEccEEEEEEcEEEEcccccccccccccccccccEEEEEEcccccccccccccccccEEEEEccEEEccccEEEEEccccEEEEEcEEEEccccccEEEEEEcccccccccccEEEEEcccEEEEccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEccccccccccEEEEEccccEEEEEEccEEEEEcEEEEEEcccEEccccEEEEEEcccEEEEEEEEEEEEcEEEcccccccccEEEEEcccccEEEEcccccccccccEEEEEccccEEEEccccccccEEEEEEccccccccccEEEEEEEcccccccEccccEEEEEEEEEEccccccEEEEEEccccccEEccccEEEcccccccEEEEEEcccccHHcccccEcccccEEEcccEEEccccccccccccHHHHcccccccccHHHHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
mgnshghhhhhrneansyfphqtptptpppfkfgpsdhhqhqpaaqfqnnstmslpyahvdcSLRALAGqaegfgrlaigglhgplyhvttladdgpgslregcrmkepLWIVFEVSGtihlrshlsvssyktidgrgqrvkltgkglrlkeCEHVIICNlefeggkgpdvdaiqikpkskhiwidrcslrdyddgliditrestditvsrchfsshdktmligadpshvadrcirvtihhcffdgtrqrhprvrYAKVHLYnnytrnwgIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKasdkeearsgcirsegdlfitgtqaglmteagehsmfhpseyyptwtvaaptdnLKQVLQHCTgwqdiqrpadqpvaaq
Flexible Loop (DISEMBL)
MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSgtihlrshlsvssyktidgrgqrvkltgkglrlkeCEHVIICNlefeggkgpdvdaiqikpkskhiwidrcslrdYDDGLIDITrestditvsrchfSSHDKTMLIGADPSHVADRCIRVTIHhcffdgtrqrhprVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDkeearsgcirsegdlFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPADQPVAAQ
Low Complexity Region (SEG)
MGNShghhhhhRNEANSYFPHQtptptpppFKFGPSDHHQHQPAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPADQPVAAQ
Disordered region (IsUnstruct)
******************************************************LPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLT************CIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDI***********
Disordered Region (DISOPRED)
************N***SYF*********************************MSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPADQPV***
Disordered Region (DISEMBL)
*************EANSYFPHQTPTPTPPPFKFG**********AQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEK*********GCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQR*********
Disordered Region (DISPRO)
*********************QTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRP********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPADQPVAAQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	383	2.2.26 [Sep-21-2011]
Q9C8G4	368	Probable pectate lyase 4	no	no	0.689	0.717	0.384	3e-44
Q9FM66	392	Putative pectate lyase 21	no	no	0.757	0.739	0.367	1e-43
Q93Z04	501	Probable pectate lyase 13	no	no	0.673	0.514	0.395	3e-40
O65388	384	Putative pectate lyase 2	no	no	0.678	0.677	0.370	5e-40
Q9LTZ0	412	Putative pectate lyase 11	no	no	0.660	0.614	0.360	3e-38
P15721	398	Probable pectate lyase P5	N/A	no	0.704	0.678	0.379	1e-37
Q944R1	470	Probable pectate lyase 15	no	no	0.681	0.555	0.369	3e-37
Q9M9S2	459	Probable pectate lyase 3	no	no	0.681	0.568	0.362	8e-37
O65457	394	Putative pectate lyase 17	no	no	0.738	0.718	0.348	1e-36
P27760	398	Pollen allergen Amb a 1.2	N/A	no	0.715	0.688	0.344	1e-36

>sp|Q9C8G4|PLY4_ARATH Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1

 Score =  179 bits (455), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/276 (38%), Positives = 161/276 (58%), Gaps = 12/276 (4%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTI 120
           +ALA  A G+G+ AIGG +GP+Y VT  +D+     PG+LR      +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 121 HLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFEGGK----GPDVDAIQ 175
            L+S L ++SYKTIDGRG +V++  G  LR+++ +HVII  +     K    G D D I+
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 176 IKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCI 235
           +  +S H+WID C L    DGLID+   ST +T+S  +F+ HDK ML+G D S++ D+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 231

Query: 236 RVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQK 294
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S +  I+S+ N + A +K
Sbjct: 232 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 291

Query: 295 KMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAG 330
           + + K +T++     +++     +  D+F+ G   G
Sbjct: 292 RSS-KQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG 326

Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 2EC: .EC: 2EC: .EC: 2

>sp|Q9FM66|PLY21_ARATH Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=3 SV=1

 Score =  177 bits (449), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/316 (36%), Positives = 162/316 (51%), Gaps = 26/316 (8%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGT 119
           + LA  A GFGR +IGG  G  Y VT   DD P     G+LR      +PLWI+F+    
Sbjct: 66  KNLADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMV 125

Query: 120 IHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFEG------------G 166
           I L+  L V+SYKTIDGRG  V++  G  L L +  ++II NL                G
Sbjct: 126 IQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLG 185

Query: 167 KGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD 226
              D D I I  +S+ IWID C+L    DGLID    STDIT+S  +  +H++ ML+G  
Sbjct: 186 GYSDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHS 244

Query: 227 PSHVADRCIRVTIHHCFF-DGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQ 285
             +  DR +RVTI   +F +G  QR PR R+   H+ NN  R+W +YA+  S +  I+SQ
Sbjct: 245 DEYSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQ 304

Query: 286 CNIYEAGQKKMAFKYLTEKASD-KEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPS 344
            N++ A   +   +    +++D  EE +    +SEGD  + G      T +G+     PS
Sbjct: 305 GNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNG---AFFTPSGKED--SPS 359

Query: 345 EYYPTWTVAAPTDNLK 360
               +  VA P   LK
Sbjct: 360 YAKFSSMVARPASLLK 375

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|Q93Z04|PLY13_ARATH Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1

 Score =  166 bits (419), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/278 (39%), Positives = 151/278 (54%), Gaps = 20/278 (7%)

Query: 67  LAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIH 121
           LA  + GFG   +GG +G +Y VT  +D+ P     G+LR G   +EPLWIVF  +  I 
Sbjct: 99  LADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIR 158

Query: 122 LRSHLSVSSYKTIDGRGQRVKLTGKG-LRLKECEHVIICNLE---------FEGGKGPDV 171
           L+  L ++SYKT+DGRG  V +TG G L L+  +H+II NL          FE     D 
Sbjct: 159 LKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDG 218

Query: 172 DAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVA 231
           D I I   S+ IW+D CS+    DGLID    ST IT+S  +F+ HD+ ML+G D ++  
Sbjct: 219 DGISIF-GSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAP 277

Query: 232 DRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYE 290
           D  ++VTI  + F  G  QR PR R   +H+ NN    W +YA+  S +  I SQ N Y 
Sbjct: 278 DTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYS 337

Query: 291 AGQKKMAFKYLTEKASDKE--EARSGCIRSEGDLFITG 326
           A     A K +T++   K+  E  +   R+EGDL   G
Sbjct: 338 APSDPSA-KEVTKRVDSKDDGEWSNWNWRTEGDLMENG 374

Susceptibility factor required for infection by most powdery mildews, but not by unrelated pathogens. Exact function not known, but clearly affects cell wall composition.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|O65388|PLY2_ARATH Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=2

 Score =  165 bits (418), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 149/286 (52%), Gaps = 26/286 (9%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADDG----PGSLREGCRMKEPLWIVFEVSGTI 120
           RALA  A GFG+ A+GG +G +Y VT  +DD     PG+LR      +PLWI F     I
Sbjct: 54  RALADCAVGFGKSAVGGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWITFARDMVI 113

Query: 121 HLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFE--------------- 164
            LR+ L ++SYKTIDGRG +V++  G  + ++   HVII  +                  
Sbjct: 114 VLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRSSPT 173

Query: 165 ---GGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTM 221
                KG D DAI I   S HIWID C      DGLID+   ST +T+S  +F+ HDK M
Sbjct: 174 HVGSRKGSDGDAIAIF-DSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVM 232

Query: 222 LIGADPSHVADRCIRVTIHHCFFD-GTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDS 280
           L+G + ++V D+ +RVTI    F  G  +R PRVR    H+ NN    W +YA+  S D 
Sbjct: 233 LLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADP 292

Query: 281 QIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITG 326
            I+S+ N + A     + K +T++     + +    R+  D+F  G
Sbjct: 293 TIFSEGNYFVASDDP-SKKQVTKRIDSGYDWKRWKWRTSKDVFKNG 337

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|Q9LTZ0|PLY11_ARATH Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2

 Score =  159 bits (403), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 148/291 (50%), Gaps = 38/291 (13%)

Query: 67  LAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIH 121
           LA  A GFG+ AIGG  G +Y VT  A+D P     G+LR     +EPLWI+F+    I 
Sbjct: 83  LADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIR 142

Query: 122 LRSHLSVSSYKTIDGRGQRVKLT-------------------------GKGLRLKECEHV 156
           L+  L ++S+KTIDGRG  V +T                         G G  +K+  H 
Sbjct: 143 LKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHH 202

Query: 157 IICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS 216
               ++ +G      DA+ I    KH+WID CSL + DDGLID    ST IT+S  H + 
Sbjct: 203 TGWWMQSDG------DAVAIF-GGKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTH 255

Query: 217 HDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVC 275
           HDK ML+G   S+  D+ ++VTI  + F +G  QR PR R+   H+ NN   +W +YA+ 
Sbjct: 256 HDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 315

Query: 276 ASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITG 326
            S    IYSQ N + A   +   +    + + + + R    RSEGD+ + G
Sbjct: 316 GSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNG 366

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|P15721|PLY56_SOLLC Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2

 Score =  157 bits (397), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 152/303 (50%), Gaps = 33/303 (10%)

Query: 67  LAGQAEGFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGTIH 121
           +A  A GFG  A+GG +GP Y VT  +DD      PG+LR G   K PLWI F  S  I 
Sbjct: 66  MADCALGFGINAMGGKYGPYYIVTDNSDDDVVDPKPGTLRFGVIQKGPLWITFARSMRIR 125

Query: 122 LRSHLSVSSYKTIDGRGQRVKL-TGKGLRLKECEHVIICNLEFE---------------- 164
           L   L VSS KTIDGRG+ V +  G G++++   +VII NL                   
Sbjct: 126 LTRELIVSSNKTIDGRGKYVHIANGAGIKIQSASNVIISNLRIHNIVPTAGGLLRESDDH 185

Query: 165 -GGKGPDV-DAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTML 222
            G +G D  DAI I   S  IWID  S+    DGLID    ST+IT+S CHF+ H+K ML
Sbjct: 186 LGLRGADEGDAISIF-NSHDIWIDHISMSRATDGLIDAVAGSTNITISNCHFTDHEKVML 244

Query: 223 IGADPSHVADRCIRVTIHHCFFDGTR--QRHPRVRYAKVHLYNNYTRNWGIYAVCASVDS 280
            GA+     DR +++T+ +  F G R  QR PR R+   HL NN   +W  YA+  S  +
Sbjct: 245 FGANDHAEEDRGMKITLAYNHF-GKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSSGA 303

Query: 281 QIYSQCNIYEAGQKKMA--FKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEH 338
            I SQ N + A  K +     Y  +  S  EE       ++GD F  G      T +G+ 
Sbjct: 304 TIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWITDGDDFENGAT---FTPSGDQ 360

Query: 339 SMF 341
           ++ 
Sbjct: 361 NLL 363

Might be needed during pollen development and tube growth.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|Q944R1|PLY15_ARATH Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1

 Score =  156 bits (394), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 143/287 (49%), Gaps = 26/287 (9%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGT 119
           + LA    GFGR AIGG  G  Y VT   D+      PG+LR     +EPLWIVF+    
Sbjct: 139 KRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMV 198

Query: 120 IHLRSHLSVSSYKTIDGRGQRVKL-TGKGLRLKECEHVIICNLEFEGGK----------- 167
           I L+  L ++S+KTID RG  V +  G  + ++   +VII  L     K           
Sbjct: 199 IELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSP 258

Query: 168 -------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKT 220
                    D DA+ I   S HIWID  SL    DGL+D    ST ITVS  HF+ H++ 
Sbjct: 259 SHFGWRTMADGDAVSIF-GSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEV 317

Query: 221 MLIGADPSHVADRCIRVTIHHCFF-DGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVD 279
           ML+G   S+  D+ ++VTI +  F +G  QR PR R+   H+ NN   +W +YA+  S +
Sbjct: 318 MLLGHSDSYTKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAE 377

Query: 280 SQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITG 326
             I SQ N Y A   + A +      +D  E +    RSEGDL + G
Sbjct: 378 PTINSQGNRYAAPMDRFAKEVTKRVETDASEWKKWNWRSEGDLLLNG 424

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|Q9M9S2|PLY3_ARATH Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1

 Score =  154 bits (390), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 149/287 (51%), Gaps = 26/287 (9%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGT 119
           + LA    GFGR   GG  GP+Y V   +D+      PG+LR       PLWI+F  S  
Sbjct: 122 KKLADCVLGFGRRTTGGKDGPIYVVKDASDNDLINPKPGTLRHAVTRDGPLWIIFARSMI 181

Query: 120 IHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFE------GGKGPDVD 172
           I L+  L ++S KTIDGRG RV +  G GL L+   +VII N+  +      GG   D +
Sbjct: 182 IKLQQELMITSDKTIDGRGARVYIMEGAGLTLQFVNNVIIHNIYVKHIVPGNGGLIRDSE 241

Query: 173 A-IQIKPKS----------KHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTM 221
           A I ++ KS           +IWID  S+    DG+ID    ST +T+S  HF+ H + M
Sbjct: 242 AHIGLRTKSDGDGISLFGATNIWIDHVSMTRCADGMIDAIDGSTAVTISNSHFTDHQEVM 301

Query: 222 LIGADPSHVADRCIRVTIHHCFFDGTR--QRHPRVRYAKVHLYNNYTRNWGIYAVCASVD 279
           L GA   HV D+ +++T+    F G R  QR PR RY  +H+ NN   +W +YA+  +++
Sbjct: 302 LFGARDEHVIDKKMQITVAFNHF-GKRLEQRMPRCRYGTIHVVNNDYTHWEMYAIGGNMN 360

Query: 280 SQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITG 326
             I SQ N + A   + A +    + +   E +S   +SEGD F+ G
Sbjct: 361 PTIISQGNRFIAPPNEEAKQITKREYTPYGEWKSWNWQSEGDYFLNG 407

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|O65457|PLY17_ARATH Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 154/321 (47%), Gaps = 38/321 (11%)

Query: 61  DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDG----PGSLREGCRMKEPLWIVFEV 116
           D +   LA  A GFG   +GG  G +Y VT   D+     PGSLR G    +PLWI F  
Sbjct: 60  DVNREDLADCAVGFGSSTLGGKKGNIYVVTNPYDNAQNPHPGSLRYGVIQAKPLWITFAK 119

Query: 117 SGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVII-------CNLEFEGG-- 166
              I L + L V+SYKTIDGRG +V++  G  + +++  +VI+       C     G   
Sbjct: 120 DMVITLANELMVNSYKTIDGRGAKVEIAYGPCITIQDVTNVIVHGISIHDCKPGKSGKVR 179

Query: 167 ---------KGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSH 217
                    KG D DAI I   S ++WID C L    DGLID+   ST IT+S  +F+ H
Sbjct: 180 SSPTHVGHRKGSDGDAITIF-GSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQH 238

Query: 218 DKTMLIGADPSHVADRCIRVTIHHCFFD-GTRQRHPRVRYAKVHLYNNYTRNWGIYAVCA 276
           DK ML+G + + V D  ++VT+    F  G  +R PRVR    H+ NN    W +YA+  
Sbjct: 239 DKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGG 298

Query: 277 SVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGC----IRSEGDLFITGTQAGLM 332
           S D  I+S+ N + A  K  +      K   K E + G      R+  D+F  G      
Sbjct: 299 SADPTIFSEGNYFIASDKSYS------KEVTKREVKGGWNNWRWRTSNDVFKNG---AFF 349

Query: 333 TEAGEHSMFHPSEYYPTWTVA 353
             +G  S+  P      +TVA
Sbjct: 350 VPSGYGSIPLPYSSAQRFTVA 370

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 2

EC: .

EC: 2

EC: .

EC: 2

>sp|P27760|MPA12_AMBAR Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 147/311 (47%), Gaps = 37/311 (11%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADDG-----PGSLREGCRMKEPLWIVFEVSGT 119
           +ALA  A+GF +   GG HG +Y VT+  DD       G+LR       PLWI+F+ +  
Sbjct: 67  QALADCAQGFAKGTYGGKHGDVYTVTSDKDDDVANPKEGTLRFAAAQNRPLWIIFKRNMV 126

Query: 120 IHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVI----------IC-NLEFEGGKG 168
           IHL   L V+S KTIDGRG +V +   GL L   +++I          +C     +   G
Sbjct: 127 IHLNQELVVNSDKTIDGRGVKVNIVNAGLTLMNVKNIIIHNINIHDIKVCPGGMIKSNDG 186

Query: 169 P-------DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTM 221
           P       D DAI +   S  IWID CSL    DGL+DIT  S+ +TVS C F+ H   +
Sbjct: 187 PPILRQQSDGDAINVA-GSSQIWIDHCSLSKASDGLLDITLGSSHVTVSNCKFTQHQFVL 245

Query: 222 LIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDS 280
           L+GAD +H  D+ +  T+  + F D   QR PR R+    + NN    WG YA+  S   
Sbjct: 246 LLGADDTHYQDKGMLATVAFNMFTDHVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGSSAP 305

Query: 281 QIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSM 340
            I SQ N + A    +    L    +   E+ S   R++ DL   G            ++
Sbjct: 306 TILSQGNRFFAPDDIIKKNVLARTGTGNAESMSWNWRTDRDLLENG------------AI 353

Query: 341 FHPSEYYPTWT 351
           F PS   P  T
Sbjct: 354 FLPSGSDPVLT 364

Ambrosia artemisiifolia (taxid: 4212)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
118483499	386	unknown [Populus trichocarpa]	0.989	0.981	0.784	1e-177
118488640	389	unknown [Populus trichocarpa]	0.994	0.979	0.764	1e-174
224140117	333	predicted protein [Populus trichocarpa]	0.861	0.990	0.872	1e-173
225439836	373	PREDICTED: probable pectate lyase 4-like	0.973	1.0	0.774	1e-172
224092007	333	predicted protein [Populus trichocarpa]	0.861	0.990	0.863	1e-171
297741529	329	unnamed protein product [Vitis vinifera]	0.851	0.990	0.865	1e-169
255587404	389	Pollen allergen Amb a 1.1 precursor, put	0.997	0.982	0.773	1e-165
147866065	422	hypothetical protein VITISV_005608 [Viti	0.973	0.883	0.686	1e-164
356548168	366	PREDICTED: probable pectate lyase 4-like	0.955	1.0	0.728	1e-164
157674317	393	pectate lyase 1 [Hevea brasiliensis]	0.900	0.877	0.776	1e-162

>gi|118483499|gb|ABK93648.1| unknown [Populus trichocarpa]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 306/390 (78%), Positives = 334/390 (85%), Gaps = 11/390 (2%)

Query: 1   MGNSH--GHHHHHRNEANSYFPHQT---PTPTPP--PFKFGPSDHHQHQPAAQFQNNSTM 53
           MGNSH  GH    R+  N  FP +T   P+ + P  PF + P    Q   ++        
Sbjct: 1   MGNSHDHGHRRKFRDNGNVPFPDKTAAVPSASQPVPPFIYQP----QIPTSSTRTPKMAT 56

Query: 54  SLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIV 113
           +LPY HVD SLRALA QAEGFGR A GGLHGP+Y+VTTLADDGPGSLR+GCR KEPLWIV
Sbjct: 57  ALPYPHVDSSLRALAAQAEGFGRSANGGLHGPIYYVTTLADDGPGSLRDGCRKKEPLWIV 116

Query: 114 FEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDA 173
           FEVSGTI LRS+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD 
Sbjct: 117 FEVSGTIQLRSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDG 176

Query: 174 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADR 233
           IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDIT+SRC+F  HDKTMLIGADP+HV DR
Sbjct: 177 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITISRCYFGQHDKTMLIGADPTHVGDR 236

Query: 234 CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ 293
           CIRVTIHHCFFDGTRQRHPRVR+ KVHLYNNYTRNWGIYAVCASV+SQIYSQ NIYEAGQ
Sbjct: 237 CIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQSNIYEAGQ 296

Query: 294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA 353
           KK+AFKYL+EKA+DKE+ARSG IRSEGDLF+TGTQAGLMTE GE  MFHPSEYYPTWTV 
Sbjct: 297 KKIAFKYLSEKAADKEKARSGSIRSEGDLFVTGTQAGLMTEDGECCMFHPSEYYPTWTVE 356

Query: 354 APTDNLKQVLQHCTGWQDIQRPADQPVAAQ 383
            PTD+LKQVLQHCTGWQ + RPADQP+AAQ
Sbjct: 357 PPTDSLKQVLQHCTGWQCVPRPADQPLAAQ 386

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488640|gb|ABK96132.1| unknown [Populus trichocarpa]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/391 (76%), Positives = 326/391 (83%), Gaps = 10/391 (2%)

Query: 1   MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQ-HQPAAQFQNNSTM------ 53
           MGNSH H HH +   N   P  +P  T              +QP      NS++      
Sbjct: 1   MGNSHAHGHHRKFRNNGNVP--SPDKTASAPSPSQPVPPSIYQPEHPLIPNSSIHASSMA 58

Query: 54  -SLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWI 112
            SLPY+HVD +LRALA QAEGFGR AIGGLHGP+Y+VTTL DDGPGSLR+GCR KEPLWI
Sbjct: 59  TSLPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWI 118

Query: 113 VFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVD 172
           VFEVSGTI L S+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD
Sbjct: 119 VFEVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVD 178

Query: 173 AIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVAD 232
            IQIKPKSKHIWIDRCSLRDYDDGLIDI RESTDITVSRCHF+ HDKT+LIGADP+HV D
Sbjct: 179 GIQIKPKSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGADPTHVGD 238

Query: 233 RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAG 292
           RCIRVTIHHCFFDGTRQRHPRVR+ KVHLYNNY RNWGIYAVCASV+SQIYSQCNIYEAG
Sbjct: 239 RCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAG 298

Query: 293 QKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTV 352
           QKK+AFKYL+EKA+DKEEA SGCIRSEGDLF+ G QAGLM E GE  MFHPSEYYPTWT+
Sbjct: 299 QKKIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMAEDGEFCMFHPSEYYPTWTI 358

Query: 353 AAPTDNLKQVLQHCTGWQDIQRPADQPVAAQ 383
             PTD+LKQVLQHCTGWQ + RPAD P+AAQ
Sbjct: 359 EPPTDSLKQVLQHCTGWQCVPRPADHPLAAQ 389

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140117|ref|XP_002323433.1| predicted protein [Populus trichocarpa] gi|222868063|gb|EEF05194.1| predicted protein [Populus trichocarpa]

 Score =  613 bits (1580), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 288/330 (87%), Positives = 309/330 (93%)

Query: 54  SLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIV 113
           +LPY HVD SLRALA QAEGFGR A GGLHGP+Y+VTTLADDGPGSLR+GCR KEPLWIV
Sbjct: 4   ALPYPHVDSSLRALAAQAEGFGRSANGGLHGPIYYVTTLADDGPGSLRDGCRKKEPLWIV 63

Query: 114 FEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDA 173
           FEVSGTI LRS+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD 
Sbjct: 64  FEVSGTIQLRSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDG 123

Query: 174 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADR 233
           IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDIT+SRC+F  HDKTMLIGADP+HV DR
Sbjct: 124 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITISRCYFGQHDKTMLIGADPTHVGDR 183

Query: 234 CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ 293
           CIRVTIHHCFFDGTRQRHPRVR+ KVHLYNNYTRNWGIYAVCASV+SQIYSQ NIYEAGQ
Sbjct: 184 CIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQIYSQSNIYEAGQ 243

Query: 294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA 353
           KK+AFKYL+EKA+DKE+ARSG IRSEGDLF+TGTQAGLMTE GE  MFHPSEYYPTWTV 
Sbjct: 244 KKIAFKYLSEKAADKEKARSGSIRSEGDLFVTGTQAGLMTEDGECCMFHPSEYYPTWTVE 303

Query: 354 APTDNLKQVLQHCTGWQDIQRPADQPVAAQ 383
            PTD+LKQVLQHCTGWQ + RPADQP+AAQ
Sbjct: 304 PPTDSLKQVLQHCTGWQCVPRPADQPLAAQ 333

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439836|ref|XP_002277576.1| PREDICTED: probable pectate lyase 4-like [Vitis vinifera]

 Score =  610 bits (1573), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 296/382 (77%), Positives = 321/382 (84%), Gaps = 9/382 (2%)

Query: 1   MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHV 60
           MG +HG        + ++  H TP  T  P    P+      P+   + N +  LPYAHV
Sbjct: 1   MGGAHG------RCSGTHRKHPTPAYTTFPDTTAPASAFGRDPSNTVRTNMS-CLPYAHV 53

Query: 61  DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTI 120
           D +LRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLR+GCR KEPLWIVFEVSG I
Sbjct: 54  DSNLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLWIVFEVSGII 113

Query: 121 HLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKS 180
           HL S+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD IQIKP S
Sbjct: 114 HLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNS 173

Query: 181 KHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIH 240
           KHIWIDRCSLRD+DDGLIDITR STDIT+SRCHFS HDKTMLIGADPSH  DRCIRVTIH
Sbjct: 174 KHIWIDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIH 233

Query: 241 HCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKY 300
           HCFFDGTRQRHPRVRY KVHLYNNYTRNWGIYAVCASV+SQIYSQCNIYEAG KK+AFKY
Sbjct: 234 HCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGHKKVAFKY 293

Query: 301 LTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLK 360
           LTEKA+DKEE R+GC+RSEGDLFI GTQAGLMT A E  MFHP E+YPTWTV AP+D LK
Sbjct: 294 LTEKAADKEEERTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWTVEAPSDALK 351

Query: 361 QVLQHCTGWQDIQRPADQPVAA 382
           QVL HCTGWQ + RPAD+   A
Sbjct: 352 QVLHHCTGWQCVPRPADEAAIA 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092007|ref|XP_002309435.1| predicted protein [Populus trichocarpa] gi|222855411|gb|EEE92958.1| predicted protein [Populus trichocarpa]

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/330 (86%), Positives = 306/330 (92%)

Query: 54  SLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIV 113
           SLPY+HVD +LRALA QAEGFGR AIGGLHGP+Y+VTTL DDGPGSLR+GCR KEPLWIV
Sbjct: 4   SLPYSHVDSALRALAAQAEGFGRCAIGGLHGPIYYVTTLLDDGPGSLRDGCRKKEPLWIV 63

Query: 114 FEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDA 173
           FEVSGTI L S+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD 
Sbjct: 64  FEVSGTIQLGSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDG 123

Query: 174 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADR 233
           IQIKPKSKHIWIDRCSLRDYDDGLIDI RESTDITVSRCHF+ HDKT+LIGADP+HV DR
Sbjct: 124 IQIKPKSKHIWIDRCSLRDYDDGLIDINRESTDITVSRCHFAQHDKTILIGADPTHVGDR 183

Query: 234 CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ 293
           CIRVTIHHCFFDGTRQRHPRVR+ KVHLYNNY RNWGIYAVCASV+SQIYSQCNIYEAGQ
Sbjct: 184 CIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYIRNWGIYAVCASVESQIYSQCNIYEAGQ 243

Query: 294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA 353
           KK+AFKYL+EKA+DKEEA SGCIRSEGDLF+ G QAGLMTE GE  MFHPSEYYPTWTV 
Sbjct: 244 KKIAFKYLSEKAADKEEASSGCIRSEGDLFVIGAQAGLMTEDGEVCMFHPSEYYPTWTVE 303

Query: 354 APTDNLKQVLQHCTGWQDIQRPADQPVAAQ 383
            PTD+LKQVLQHCTGWQ + RPAD P+AAQ
Sbjct: 304 PPTDSLKQVLQHCTGWQCVPRPADHPLAAQ 333

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741529|emb|CBI32661.3| unnamed protein product [Vitis vinifera]

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/328 (86%), Positives = 301/328 (91%), Gaps = 2/328 (0%)

Query: 55  LPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVF 114
           LPYAHVD +LRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLR+GCR KEPLWIVF
Sbjct: 4   LPYAHVDSNLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLWIVF 63

Query: 115 EVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAI 174
           EVSG IHL S+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD I
Sbjct: 64  EVSGIIHLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGI 123

Query: 175 QIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRC 234
           QIKP SKHIWIDRCSLRD+DDGLIDITR STDIT+SRCHFS HDKTMLIGADPSH  DRC
Sbjct: 124 QIKPNSKHIWIDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTGDRC 183

Query: 235 IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQK 294
           IRVTIHHCFFDGTRQRHPRVRY KVHLYNNYTRNWGIYAVCASV+SQIYSQCNIYEAG K
Sbjct: 184 IRVTIHHCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGHK 243

Query: 295 KMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAA 354
           K+AFKYLTEKA+DKEE R+GC+RSEGDLFI GTQAGLMT A E  MFHP E+YPTWTV A
Sbjct: 244 KVAFKYLTEKAADKEEERTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWTVEA 301

Query: 355 PTDNLKQVLQHCTGWQDIQRPADQPVAA 382
           P+D LKQVL HCTGWQ + RPAD+   A
Sbjct: 302 PSDALKQVLHHCTGWQCVPRPADEAAIA 329

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587404|ref|XP_002534262.1| Pollen allergen Amb a 1.1 precursor, putative [Ricinus communis] gi|223525624|gb|EEF28121.1| Pollen allergen Amb a 1.1 precursor, putative [Ricinus communis]

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 301/389 (77%), Positives = 322/389 (82%), Gaps = 7/389 (1%)

Query: 1   MGNSHGHHHHHRNEA--NSYFPHQTPTPTPPPF-KFGPSDHHQHQPAAQFQNNSTMSLPY 57
           MGNSHGH HHHR     N   P     P PP   K G    +Q+Q     QN    SLPY
Sbjct: 1   MGNSHGHGHHHRKNPIHNGANPKTEAAPPPPAVNKHGLQPLNQNQNQDLKQNTMVTSLPY 60

Query: 58  AHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVS 117
           AHVD SLRALAGQAEGFGR AIGG HG LYHVTTL+DDGPGSLR+GCR KEPLWIVFEVS
Sbjct: 61  AHVDSSLRALAGQAEGFGRFAIGGFHGQLYHVTTLSDDGPGSLRDGCRKKEPLWIVFEVS 120

Query: 118 GTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGP----DVDA 173
           GTIHL S+LSVSSYKTIDGRGQ++KLTGKGLRLKECEHVI+CNLEFEGG+G     DVDA
Sbjct: 121 GTIHLHSYLSVSSYKTIDGRGQQIKLTGKGLRLKECEHVIVCNLEFEGGRGXXRGHDVDA 180

Query: 174 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADR 233
           IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDIT+SRCHFS HDKTMLIGADPSH+ DR
Sbjct: 181 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITISRCHFSQHDKTMLIGADPSHIGDR 240

Query: 234 CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ 293
           CIRVTIHHCFFDGT QRHPRVR+ KVHLYNNYTRNWGIYAVCASV++QIYSQ NIYEA Q
Sbjct: 241 CIRVTIHHCFFDGTHQRHPRVRFGKVHLYNNYTRNWGIYAVCASVEAQIYSQYNIYEAAQ 300

Query: 294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA 353
           KK+AFKYLTEKA+DKEEA SG IRSEGD F++GTQAGLM+E  EH  F+P EYYPTWTV 
Sbjct: 301 KKVAFKYLTEKAADKEEAVSGFIRSEGDFFVSGTQAGLMSETVEHCTFNPREYYPTWTVE 360

Query: 354 APTDNLKQVLQHCTGWQDIQRPADQPVAA 382
           APTD LK VLQH TGWQ + RP DQ   A
Sbjct: 361 APTDALKNVLQHYTGWQCVPRPTDQISTA 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147866065|emb|CAN80964.1| hypothetical protein VITISV_005608 [Vitis vinifera]

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/431 (68%), Positives = 321/431 (74%), Gaps = 58/431 (13%)

Query: 1   MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHV 60
           MG +HG        + ++  H TP  T  P    P+      P+   + N +  LPYAHV
Sbjct: 1   MGGAHG------RCSGTHRKHPTPAYTTFPDTTAPASAFGRDPSNTVRTNMS-CLPYAHV 53

Query: 61  DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTI 120
           D +LRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLR+GCR KEPLWIVFEVSG I
Sbjct: 54  DSNLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRDGCRKKEPLWIVFEVSGII 113

Query: 121 HLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKS 180
           HL S+L+VSSYKTIDGRGQR+KLTGKGLRLKECEHVIICNLEFEGG+GPDVD IQIKP S
Sbjct: 114 HLSSYLNVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPNS 173

Query: 181 KHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIH 240
           KHIWIDRCSLRD+DDGLIDITR STDIT+SRCHFS HDKTMLIGADPSH  DRCIRVTIH
Sbjct: 174 KHIWIDRCSLRDFDDGLIDITRASTDITISRCHFSQHDKTMLIGADPSHTGDRCIRVTIH 233

Query: 241 HCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKY 300
           HCFFDGTRQRHPRVRY KVHLYNNYTRNWGIYAVCASV+SQIYSQCNIYEAG KK+AFKY
Sbjct: 234 HCFFDGTRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGHKKVAFKY 293

Query: 301 LTE-------------------------------------------------KASDKEEA 311
           LTE                                                 KA+DKEE 
Sbjct: 294 LTEKLLCYSVADYLDMNAYLPPYSWVSXMPVEHGCRPMVDVEGIPPIIYHLVKAADKEEE 353

Query: 312 RSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQD 371
           R+GC+RSEGDLFI GTQAGLMT A E  MFHP E+YPTWTV AP+D LKQVL HCTGWQ 
Sbjct: 354 RTGCLRSEGDLFINGTQAGLMTVASE--MFHPREFYPTWTVEAPSDALKQVLHHCTGWQC 411

Query: 372 IQRPADQPVAA 382
           + RPAD+   A
Sbjct: 412 VPRPADEAAIA 422

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356548168|ref|XP_003542475.1| PREDICTED: probable pectate lyase 4-like [Glycine max]

 Score =  583 bits (1503), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 277/380 (72%), Positives = 316/380 (83%), Gaps = 14/380 (3%)

Query: 1   MGNSHGHHHHHRNEANSYFPHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHV 60
           MGNSHGH H  R   NS  P+  P P            H++ P     N++ +SLPY HV
Sbjct: 1   MGNSHGHRH--RKHGNSVPPNTVPPP------------HKYNPHPTTSNSTMLSLPYTHV 46

Query: 61  DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTI 120
           D +LR+LA QAEGFGR AIGGLHGPL+ VT+LADDGPGSLR+ CR KEPLWIVFEVSGTI
Sbjct: 47  DTTLRSLAAQAEGFGRFAIGGLHGPLHPVTSLADDGPGSLRDACRRKEPLWIVFEVSGTI 106

Query: 121 HLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKS 180
            L S+L+VSS+KTIDGRGQR+KL+GKGLRLKECEHVIICNLEFEGG+G DVDAIQIKP S
Sbjct: 107 QLSSYLNVSSHKTIDGRGQRIKLSGKGLRLKECEHVIICNLEFEGGRGHDVDAIQIKPNS 166

Query: 181 KHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIH 240
           KHIWIDRC+L D+DDGLIDITRESTDIT+SRCHFS HDK MLIGADP+HV DRC+RVTIH
Sbjct: 167 KHIWIDRCTLSDFDDGLIDITRESTDITISRCHFSQHDKAMLIGADPTHVGDRCMRVTIH 226

Query: 241 HCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKY 300
           HCFF+GTRQR PRVR+AKVHLYNNY RNWGIYAVCASV+SQI+SQ NIYEAGQKK+AFKY
Sbjct: 227 HCFFNGTRQRQPRVRFAKVHLYNNYIRNWGIYAVCASVESQIFSQHNIYEAGQKKVAFKY 286

Query: 301 LTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLK 360
           LTEKA+DKE   +G IRSEGD+F+ G Q GLMTE    +MFHPSE+YP+WTV APTD+LK
Sbjct: 287 LTEKAADKEVGATGTIRSEGDIFLNGAQKGLMTEDVGCNMFHPSEHYPSWTVEAPTDDLK 346

Query: 361 QVLQHCTGWQDIQRPADQPV 380
           Q+L HCTGWQ + +PADQ +
Sbjct: 347 QILHHCTGWQSLAKPADQTL 366

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157674317|gb|ABV60263.1| pectate lyase 1 [Hevea brasiliensis]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/358 (77%), Positives = 301/358 (84%), Gaps = 13/358 (3%)

Query: 20  PHQTPTPTPPPFKFGPSDHHQHQPAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAI 79
           P Q P+   PP    PS                ++LPYAHVDC+LRALAGQAEGFGR AI
Sbjct: 47  PPQVPSSAQPPHNQTPS-------------TMVITLPYAHVDCNLRALAGQAEGFGRHAI 93

Query: 80  GGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQ 139
           GG+ GPLYHVT+L DDGPGSLR+GCR KEPLWIVFEVSGTIHLRS LSVSSYKTIDGRGQ
Sbjct: 94  GGVRGPLYHVTSLLDDGPGSLRDGCRRKEPLWIVFEVSGTIHLRSFLSVSSYKTIDGRGQ 153

Query: 140 RVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLID 199
            VKLTGKGLRLKECEHVIICNLE EGG+G DVD IQIKPKSKHIWIDR SLRDYDDGLID
Sbjct: 154 TVKLTGKGLRLKECEHVIICNLELEGGRGDDVDGIQIKPKSKHIWIDRRSLRDYDDGLID 213

Query: 200 ITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKV 259
           ITRESTDIT+SRC FS HDKT+LIG  P   +DR IRVTIHHCFFDGTRQRHPRVR+AKV
Sbjct: 214 ITRESTDITISRCRFSQHDKTILIGGHPPQSSDRYIRVTIHHCFFDGTRQRHPRVRFAKV 273

Query: 260 HLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSE 319
           HLYNNYTRNWGIYAVCASV+SQIYSQCNIY AG+KK+AFKYLTEKA DKE+A +G ++SE
Sbjct: 274 HLYNNYTRNWGIYAVCASVESQIYSQCNIYGAGEKKVAFKYLTEKAPDKEKAGTGYVKSE 333

Query: 320 GDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPAD 377
           GDLF TGTQAGLM+E+GEH  FHPSEYYP WTV APT  LK+ LQHCTGWQ + RPAD
Sbjct: 334 GDLFTTGTQAGLMSESGEHCKFHPSEYYPEWTVEAPTAKLKKTLQHCTGWQCVPRPAD 391

Source: Hevea brasiliensis

Species: Hevea brasiliensis

Genus: Hevea

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
TAIR|locus:2100651	331	AT3G55140 [Arabidopsis thalian	0.853	0.987	0.782	2.8e-146
TAIR|locus:2074999	378	AT3G09540 [Arabidopsis thalian	0.874	0.886	0.697	7.1e-132
TAIR|locus:2204232	368	AT1G30350 [Arabidopsis thalian	0.689	0.717	0.384	2.2e-43
TAIR|locus:2086656	412	AT3G27400 [Arabidopsis thalian	0.475	0.441	0.364	8.2e-42
TAIR|locus:2179949	518	AT5G04310 [Arabidopsis thalian	0.415	0.306	0.403	1.9e-40
TAIR|locus:2082667	501	PMR6 "powdery mildew resistant	0.671	0.512	0.394	8.7e-40
TAIR|locus:2093761	452	AT3G24230 [Arabidopsis thalian	0.485	0.411	0.363	1e-37
TAIR|locus:2005487	470	AT4G13710 [Arabidopsis thalian	0.404	0.329	0.408	6.2e-37
TAIR|locus:2162182	392	AT5G55720 [Arabidopsis thalian	0.671	0.655	0.367	1.5e-35
TAIR|locus:2154384	417	AT5G48900 [Arabidopsis thalian	0.501	0.460	0.345	3.4e-34

TAIR|locus:2100651 AT3G55140 [Arabidopsis thaliana (taxid:3702)]

 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 256/327 (78%), Positives = 290/327 (88%)

Query:    54 SLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIV 113
             SLPYA  DCSLRALAG+AEGFGR A+GGLHG LY VT+LADDGPG+LREG R KEPLWIV
Sbjct:     3 SLPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGTLREGGRRKEPLWIV 62

Query:   114 FEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDA 173
             F VSGTI+L S+LSVSSYKTIDGRGQR+KLTGKG+RLKECEH+IICNLEFEGG+G DVD 
Sbjct:    63 FAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDVDG 122

Query:   174 IQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADR 233
             IQIKPKS+HIWIDRCSLRDYDDGLIDITR+STDITVSRC+F+ HDKTMLIGADPSHV DR
Sbjct:   123 IQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHVEDR 182

Query:   234 CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ 293
             CIRVTIHHCFFDGTRQR PR+R+ KVHLYNNYTRNWGIYAVCASV++Q++SQCNIYEAG 
Sbjct:   183 CIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEAGV 242

Query:   294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA 353
             KK  F+Y +EKA+DKEEAR+G +RSE DLF+ G Q  LMT A E  +FHPSE+YPTWTV 
Sbjct:   243 KKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSLMTGASEECVFHPSEHYPTWTVE 302

Query:   354 APTDNLKQVLQHCTGWQDIQRPADQPV 380
              P++ LKQ++Q CTGWQ + RP+D  V
Sbjct:   303 PPSETLKQIMQICTGWQSLSRPSDHGV 329

GO:0005886 "plasma membrane" evidence=ISM

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2074999 AT3G09540 [Arabidopsis thaliana (taxid:3702)]

 Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
 Identities = 235/337 (69%), Positives = 286/337 (84%)

Query:    43 PAAQFQNNSTMSLPYAHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLRE 102
             P++   ++ T+  PY HVD SLR+LAG+AEGFGR A+GGL+GP+ HVT+LAD+GPGSLRE
Sbjct:    40 PSSPSDHHMTVG-PYCHVDSSLRSLAGKAEGFGRAAVGGLNGPICHVTSLADEGPGSLRE 98

Query:   103 GCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLE 162
              C+  EPLWIVF+VSGTI+L S ++VSS+ T+DGRGQ+VK+TGKGLRLKECE+VIICNLE
Sbjct:    99 ACKRPEPLWIVFDVSGTINLSSFVNVSSHTTVDGRGQKVKITGKGLRLKECENVIICNLE 158

Query:   163 FEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTML 222
             FEGG GPD DAIQIKPKS +IWIDRCSL++Y DGLIDITRESTDITVSRCHF +H+KTML
Sbjct:   159 FEGGVGPDADAIQIKPKSHNIWIDRCSLKNYYDGLIDITRESTDITVSRCHFMNHNKTML 218

Query:   223 IGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQI 282
             IGAD SHV DRCIRVTIHHCFFDGTRQRHPRVR+AKVHL+NNYTR+W IYAV A V+SQI
Sbjct:   219 IGADTSHVTDRCIRVTIHHCFFDGTRQRHPRVRFAKVHLFNNYTRHWAIYAVGAGVESQI 278

Query:   283 YSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFH 342
             +SQCNIYEAG+KK  FKY+TEKA+DKE+  +G +RSEGDL + G ++ L ++ GE  +F 
Sbjct:   279 HSQCNIYEAGEKKTVFKYITEKAADKEKPGAGFVRSEGDLLLNGAKSCL-SQGGERYVFS 337

Query:   343 PSEYYPTWTVAAPTDNLKQVLQHCTGWQDIQRPADQP 379
             P ++Y  WTV +PTD LK  L+H TGWQ++  P D+P
Sbjct:   338 PIQHYSEWTVESPTDILKNYLKHSTGWQNLPLPLDRP 374

GO:0005886 "plasma membrane" evidence=ISM

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2204232 AT1G30350 [Arabidopsis thaliana (taxid:3702)]

 Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
 Identities = 106/276 (38%), Positives = 161/276 (58%)

Query:    65 RALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTI 120
             +ALA  A G+G+ AIGG +GP+Y VT  +D+     PG+LR      +PLWI F     I
Sbjct:    53 QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query:   121 HLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEHVIICNLEFEGGK----GPDVDAIQ 175
              L+S L ++SYKTIDGRG +V++  G  LR+++ +HVII  +     K    G D D I+
Sbjct:   113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query:   176 IKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCI 235
             +  +S H+WID C L    DGLID+   ST +T+S  +F+ HDK ML+G D S++ D+ +
Sbjct:   173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 231

Query:   236 RVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQK 294
             RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S +  I+S+ N + A +K
Sbjct:   232 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 291

Query:   295 KMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAG 330
             + + K +T++     +++     +  D+F+ G   G
Sbjct:   292 RSS-KQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG 326

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2086656 AT3G27400 [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 8.2e-42, Sum P(2) = 8.2e-42
 Identities = 70/192 (36%), Positives = 102/192 (53%)

Query:   170 DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH 229
             D DA+ I    KH+WID CSL + DDGLID    ST IT+S  H + HDK ML+G   S+
Sbjct:   210 DGDAVAIFG-GKHVWIDHCSLSNCDDGLIDAIHGSTAITISNNHMTHHDKVMLLGHSDSY 268

Query:   230 VADRCIRVTI--HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCN 287
               D+ ++VTI  +H F +G  QR PR R+   H+ NN   +W +YA+  S    IYSQ N
Sbjct:   269 TQDKNMQVTIAFNH-FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN 327

Query:   288 IYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYY 347
              + A   +   +    + + + + R    RSEGD+ + G       E+G  +   PS Y 
Sbjct:   328 RFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAY---FRESGAEA---PSTYA 381

Query:   348 PTWTVAAPTDNL 359
                +++A   +L
Sbjct:   382 RASSLSARPSSL 393

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2179949 AT5G04310 [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.9e-40, Sum P(2) = 1.9e-40
 Identities = 67/166 (40%), Positives = 94/166 (56%)

Query:   165 GGKG-PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLI 223
             G +G  D D I +   S HIW+D CSL    DGLID+   ST +T+S  +FS HD+ ML+
Sbjct:   235 GFRGVSDGDGISVSA-SHHIWVDHCSLGYCADGLIDVILASTAVTISNNYFSHHDEVMLL 293

Query:   224 GADPSHVADRCIRVTI--HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQ 281
             G D  + AD+ ++VTI  +H F +G  QR PR R+  +H+ NN    W +YA+  S    
Sbjct:   294 GHDDRYTADKGMQVTIAFNH-FGEGLVQRMPRCRHGYIHVVNNDFTAWEMYAIGGSASPT 352

Query:   282 IYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCI-RSEGDLFITG 326
             I SQ N Y A     A K +T++    E+  SG   R+EGD+ + G
Sbjct:   353 INSQGNRYTAPIDPNA-KEVTKRVDSNEKHWSGWNWRTEGDVMVNG 397

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0030570 "pectate lyase activity" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

TAIR|locus:2082667 PMR6 "powdery mildew resistant 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 110/279 (39%), Positives = 151/279 (54%)

Query:    67 LAGQAEGFGRLAIGGLHGPLYHVTTLADDGP-----GSLREGCRMKEPLWIVFEVSGTIH 121
             LA  + GFG   +GG +G +Y VT  +D+ P     G+LR G   +EPLWIVF  +  I 
Sbjct:    99 LADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIR 158

Query:   122 LRSHLSVSSYKTIDGRGQRVKLTGKG-LRLKECEHVIICNLE---------FEGGKGPDV 171
             L+  L ++SYKT+DGRG  V +TG G L L+  +H+II NL          FE     D 
Sbjct:   159 LKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFEKRGRSDG 218

Query:   172 DAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVA 231
             D I I    K IW+D CS+    DGLID    ST IT+S  +F+ HD+ ML+G D ++  
Sbjct:   219 DGISIFGSQK-IWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAP 277

Query:   232 DRCIRVTI--HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIY 289
             D  ++VTI  +H F  G  QR PR R   +H+ NN    W +YA+  S +  I SQ N Y
Sbjct:   278 DTGMQVTIAFNH-FGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRY 336

Query:   290 EAGQKKMAFKYLTEKASDKEEAR--SGCIRSEGDLFITG 326
              A     A K +T++   K++    +   R+EGDL   G
Sbjct:   337 SAPSDPSA-KEVTKRVDSKDDGEWSNWNWRTEGDLMENG 374

GO:0005886 "plasma membrane" evidence=ISM

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009814 "defense response, incompatible interaction" evidence=IMP

GO:0042547 "cell wall modification involved in multidimensional cell growth" evidence=IMP

GO:0046658 "anchored to plasma membrane" evidence=ISS

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2093761 AT3G24230 [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
 Identities = 72/198 (36%), Positives = 109/198 (55%)

Query:   147 GLRLKECE---HVIICNLEFEGG-KGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDIT 201
             GL + +C+   +V + +   + G +G  D DAI I   S HIWID  SL +  DGL+D+ 
Sbjct:   222 GLHIHDCKRTGNVTVRSSPSQAGFRGTADGDAINIFGSS-HIWIDHNSLSNCTDGLVDVV 280

Query:   202 RESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVH 260
               ST IT+S  HF+ HD+ ML+G + S+  D+ ++VT+ ++ F +G  QR PR R+   H
Sbjct:   281 NGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFH 340

Query:   261 LYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDK-EEARSGCIRSE 319
             + NN   +W +YA+  S +  I SQ N + A  K  + K +T++   K  E      RSE
Sbjct:   341 VVNNDYTHWKMYAIGGSANPTINSQGNRF-AAPKNHSAKEVTKRLDTKGNEWMEWNWRSE 399

Query:   320 GDLFITGTQAGLMTEAGE 337
              DL + G      T +GE
Sbjct:   400 KDLLVNGA---FFTPSGE 414

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2005487 AT4G13710 [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 6.2e-37, Sum P(2) = 6.2e-37
 Identities = 65/159 (40%), Positives = 91/159 (57%)

Query:   170 DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH 229
             D DA+ I   S HIWID  SL    DGL+D    ST ITVS  HF+ H++ ML+G   S+
Sbjct:   268 DGDAVSIFGSS-HIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSY 326

Query:   230 VADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNI 288
               D+ ++VTI ++ F +G  QR PR R+   H+ NN   +W +YA+  S +  I SQ N 
Sbjct:   327 TKDKLMQVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNR 386

Query:   289 YEAGQKKMAFKYLTEKA-SDKEEARSGCIRSEGDLFITG 326
             Y A   + A K +T++  +D  E +    RSEGDL + G
Sbjct:   387 YAAPMDRFA-KEVTKRVETDASEWKKWNWRSEGDLLLNG 424

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2162182 AT5G55720 [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 103/280 (36%), Positives = 144/280 (51%)

Query:    97 PGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLT-GKGLRLKECEH 155
             PG+LR      +PLWI+F+    I L+  L V+SYKTIDGRG  V++  G  L L +  +
Sbjct:   103 PGTLRYAATQDQPLWIIFDRDMVIQLKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSN 162

Query:   156 VIICNLEFEG------------GKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRE 203
             +II NL                G   D D I I  +S+ IWID C+L    DGLID    
Sbjct:   163 IIINNLYIHDCVPVKRNALSSLGGYSDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNG 221

Query:   204 STDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFF-DGTRQRHPRVRYAKVHLY 262
             STDIT+S  +  +H++ ML+G    +  DR +RVTI   +F +G  QR PR R+   H+ 
Sbjct:   222 STDITISNSYMLNHNEVMLLGHSDEYSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIV 281

Query:   263 NNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLT--EKASDKEEARSGCIRSEG 320
             NN  R+W +YA+  S +  I+SQ N++ A   +   K +T  E A   EE +    +SEG
Sbjct:   282 NNIYRDWKMYAIGGSANPTIFSQGNVFIASNNQFT-KEVTKRESADGDEEWKEWNWKSEG 340

Query:   321 DLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLK 360
             D  + G      T +G+     PS    +  VA P   LK
Sbjct:   341 DEMVNGA---FFTPSGKEDS--PSYAKFSSMVARPASLLK 375

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

TAIR|locus:2154384 AT5G48900 [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
 Identities = 69/200 (34%), Positives = 104/200 (52%)

Query:   170 DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH 229
             D D I I   S HIWID  SL +  DGLID    ST IT+S  +F+ H++ ML+G   ++
Sbjct:   215 DGDGISIFGSS-HIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDTY 273

Query:   230 VADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNI 288
               D+ ++VTI ++ F +G  QR PR R+   H+ NN   +W +YA+  S    I SQ N 
Sbjct:   274 TRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNR 333

Query:   289 YEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYP 348
             Y A + + A +      + + + R    RSEGDLF+ G      T +G       + Y  
Sbjct:   334 YLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFLNGA---FFTRSGSGL---GASYAR 387

Query:   349 TWTVAAPTDNLKQVLQHCTG 368
               ++AA + +L  V+ +  G
Sbjct:   388 ASSLAAKSSSLVGVITYNAG 407

GO:0005576 "extracellular region" evidence=ISM

GO:0016829 "lyase activity" evidence=ISS

GO:0030570 "pectate lyase activity" evidence=ISS

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pg.C_LG_XVI000684	SubName- Full=Putative uncharacterized protein; (333 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00011207	hypothetical protein (558 aa)			•			•			0.929
	eugene3.00280097	RecName- Full=Pectinesterase; EC=3.1.1.11; (520 aa)			•			•			0.928
	eugene3.00140126	hypothetical protein (514 aa)			•			•			0.928
	eugene3.00030462	hypothetical protein (580 aa)			•			•			0.927
	gw1.XIII.724.1	pectinesterase family protein (EC-3.1.1.11) (512 aa)			•			•			0.927
	fgenesh4_pm.C_LG_II000883	hypothetical protein (450 aa)			•			•			0.927
	estExt_fgenesh4_pm.C_LG_VII0457	pectinesterase family protein (EC-3.1.1.11) (340 aa)			•			•			0.926
	gw1.X.3259.1	pectinesterase family protein (EC-3.1.1.11) (555 aa)			•			•			0.926
	eugene3.00021342	hypothetical protein (514 aa)			•			•			0.925
	estExt_fgenesh4_pg.C_1450045	pectinesterase family protein (EC-3.1.1.11) (381 aa)			•			•			0.925

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	383
smart00656	190	smart00656, Amb_all, Amb_all domain	3e-68
COG3866	345	COG3866, PelB, Pectate lyase [Carbohydrate transpo	3e-45
pfam00544	200	pfam00544, Pec_lyase_C, Pectate lyase	2e-38

>gnl|CDD|214765 smart00656, Amb_all, Amb_all domain

 Score =  213 bits (544), Expect = 3e-68
 Identities = 75/179 (41%), Positives = 99/179 (55%), Gaps = 13/179 (7%)

Query: 126 LSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEG---GKGPDVDAIQIKPKSKH 182
           + ++S KTIDGRG +V++ G GL +K   +VII NL         G D DAI I   S +
Sbjct: 12  IIINSNKTIDGRGSKVEIKGGGLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDG-SSN 70

Query: 183 IWIDRCSLRD---------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADR 233
           +WID  SL             DGLIDI   ST +T+S  +F +H K ML+G   S   D 
Sbjct: 71  VWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFHNHWKVMLLGHSDSDTDDG 130

Query: 234 CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAG 292
            +RVTI H +F   RQR PRVR+  VH+YNNY   W  YA+   + + I S+ N +EA 
Sbjct: 131 KMRVTIAHNYFGNLRQRAPRVRFGYVHVYNNYYTGWTSYAIGGRMGATILSEGNYFEAP 189

Length = 190

>gnl|CDD|226384 COG3866, PelB, Pectate lyase [Carbohydrate transport and metabolism]

 Score =  158 bits (401), Expect = 3e-45
 Identities = 91/297 (30%), Positives = 139/297 (46%), Gaps = 35/297 (11%)

Query: 80  GGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHL------RSHLSVSSYKT 133
           GG  G +  V T  D     L           ++  V GTI        +  + + S KT
Sbjct: 50  GGSGGDIVTVRTAND-----LETYLSASGKYTVIIVVKGTITASTPSDKKITIKIGSNKT 104

Query: 134 IDGRGQRVKLTGKGLRLKECEHVIICNLEFEG-GKG-PDVDAIQIKPKSKHIWIDRCSLR 191
           I G G    L G GL++++  +VII NL FEG  +G P+ DAI I     +IWID  +  
Sbjct: 105 IVGSGADATLVGGGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFS 164

Query: 192 DYD--------DGLIDITRESTDITVSRCHFSSHDKTMLIG-ADPSHVADRCIRVTIHHC 242
                      DGL+DI +++  IT+S   F  HDK+ L+G +D S+  D   +VTIHH 
Sbjct: 165 GGSYNASGSHGDGLVDIKKDANYITISYNKFHDHDKSSLLGSSDSSNYDDGKYKVTIHHN 224

Query: 243 FFDGTRQRHPRVRYAKVHLYNNYTRNWGIY--AVCASVDSQIYSQCNIYEAGQKKMAFKY 300
           +F    QR PR+R+  VH+YNNY      +  A+     ++IY + N +E G + + F  
Sbjct: 225 YFKNLYQRGPRIRFGMVHVYNNYYEGNPKFGVAITIGTSAKIYVENNYFENGSEGLGFL- 283

Query: 301 LTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTD 357
                    +  SG    +   ++  +++  M+       ++PS YY  +TV  P D
Sbjct: 284 -------DTKGTSGYANQDSGSYLNSSKS--MSVRAGGVTWNPSSYYS-YTVDPPED 330

Length = 345

>gnl|CDD|215986 pfam00544, Pec_lyase_C, Pectate lyase

 Score =  136 bits (343), Expect = 2e-38
 Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 23/201 (11%)

Query: 107 KEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKE-CEHVIICNLEFEG 165
           K+PL  V   + TI   + ++V + KTI GRG  V L   G+R+ +   +VII NL    
Sbjct: 1   KQPL--VITSNKTIDSLTKVNVGANKTIIGRGANVSLANIGIRITKNSSNVIIQNLRIHH 58

Query: 166 -----------GKGPDVDAIQIKPKSKHIWIDRCSLRDYD--------DGLIDITRESTD 206
                      G   D DAIQI   S +IWID CSL  ++        DGL+DI   ST 
Sbjct: 59  NIRVNPHHEGPGGAKDGDAIQID-NSGNIWIDHCSLSGHNFSDDDGSFDGLVDIKEGSTY 117

Query: 207 ITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYT 266
           +T+S C F++H K ML G   S+  D+ +RVT+ H +F+   QR PR RY   H+YNN  
Sbjct: 118 VTISNCLFTNHKKVMLFGHSDSNSQDKGMRVTLAHNYFNNVNQRMPRCRYGYFHVYNNLY 177

Query: 267 RNWGIYAVCASVDSQIYSQCN 287
            NW  YA   S +  I S+ N
Sbjct: 178 VNWFQYAFGGSQNGTILSEGN 198

This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. Length = 200

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	383
COG3866	345	PelB Pectate lyase [Carbohydrate transport and met	100.0
PF00544	200	Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pe	100.0
smart00656	190	Amb_all Amb_all domain.	100.0
TIGR03805	314	beta_helix_1 parallel beta-helix repeat-containing	99.14
PF14592	425	Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OF	98.92
PLN02218	431	polygalacturonase ADPG	98.28
PF13229	158	Beta_helix: Right handed beta helix region; PDB: 2	98.25
PLN03003	456	Probable polygalacturonase At3g15720	98.24
TIGR03808	455	RR_plus_rpt_1 twin-arg-translocated uncharacterize	98.22
PLN02793	443	Probable polygalacturonase	98.2
TIGR03805	314	beta_helix_1 parallel beta-helix repeat-containing	98.17
PLN02218	431	polygalacturonase ADPG	98.15
PLN02155	394	polygalacturonase	98.13
PLN02188	404	polygalacturonase/glycoside hydrolase family prote	98.13
PF12708	225	Pectate_lyase_3: Pectate lyase superfamily protein	98.11
PF00295	326	Glyco_hydro_28: Glycosyl hydrolases family 28; Int	97.89
PLN03010	409	polygalacturonase	97.86
PLN03010	409	polygalacturonase	97.85
PLN02480	343	Probable pectinesterase	97.81
PF07602	246	DUF1565: Protein of unknown function (DUF1565); In	97.73
PF01696	386	Adeno_E1B_55K: Adenovirus EB1 55K protein / large	97.72
PLN02793	443	Probable polygalacturonase	97.71
PF13229	158	Beta_helix: Right handed beta helix region; PDB: 2	97.71
PLN03003	456	Probable polygalacturonase At3g15720	97.7
PLN02197	588	pectinesterase	97.64
PF05048	236	NosD: Periplasmic copper-binding protein (NosD); I	97.61
PF05048	236	NosD: Periplasmic copper-binding protein (NosD); I	97.57
PLN02188	404	polygalacturonase/glycoside hydrolase family prote	97.34
PLN02155	394	polygalacturonase	97.32
PF00295	326	Glyco_hydro_28: Glycosyl hydrolases family 28; Int	97.31
PLN02176	340	putative pectinesterase	97.24
PLN02432	293	putative pectinesterase	97.18
PLN02416	541	probable pectinesterase/pectinesterase inhibitor	97.17
TIGR03808	455	RR_plus_rpt_1 twin-arg-translocated uncharacterize	97.16
PLN02170	529	probable pectinesterase/pectinesterase inhibitor	97.1
PLN02217	670	probable pectinesterase/pectinesterase inhibitor	97.04
PLN02773	317	pectinesterase	96.93
PLN02682	369	pectinesterase family protein	96.9
PLN02933	530	Probable pectinesterase/pectinesterase inhibitor	96.89
PLN02301	548	pectinesterase/pectinesterase inhibitor	96.88
PLN02990	572	Probable pectinesterase/pectinesterase inhibitor	96.81
COG5434	542	PGU1 Endopygalactorunase [Cell envelope biogenesis	96.78
smart00656	190	Amb_all Amb_all domain.	96.76
PLN02713	566	Probable pectinesterase/pectinesterase inhibitor	96.76
COG3420	408	NosD Nitrous oxidase accessory protein [Inorganic	96.72
PLN02488	509	probable pectinesterase/pectinesterase inhibitor	96.72
PLN02506	537	putative pectinesterase/pectinesterase inhibitor	96.68
PLN02665	366	pectinesterase family protein	96.68
PLN02745	596	Putative pectinesterase/pectinesterase inhibitor	96.67
PLN03043	538	Probable pectinesterase/pectinesterase inhibitor;	96.64
PLN02201	520	probable pectinesterase/pectinesterase inhibitor	96.62
PF01095	298	Pectinesterase: Pectinesterase; InterPro: IPR00007	96.6
PLN02313	587	Pectinesterase/pectinesterase inhibitor	96.59
PLN02304	379	probable pectinesterase	96.56
PLN02995	539	Probable pectinesterase/pectinesterase inhibitor	96.52
PLN02468	565	putative pectinesterase/pectinesterase inhibitor	96.51
PLN02497	331	probable pectinesterase	96.42
PLN02484	587	probable pectinesterase/pectinesterase inhibitor	96.36
COG3420	408	NosD Nitrous oxidase accessory protein [Inorganic	96.35
PLN02708	553	Probable pectinesterase/pectinesterase inhibitor	96.34
PLN02314	586	pectinesterase	96.31
PLN02916	502	pectinesterase family protein	96.31
PLN02634	359	probable pectinesterase	96.02
PF12708	225	Pectate_lyase_3: Pectate lyase superfamily protein	95.95
PF00544	200	Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pe	95.67
PRK10531	422	acyl-CoA thioesterase; Provisional	95.51
COG3866	345	PelB Pectate lyase [Carbohydrate transport and met	95.36
PLN02671	359	pectinesterase	95.13
COG5434	542	PGU1 Endopygalactorunase [Cell envelope biogenesis	93.16
PF14592	425	Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OF	89.1
PF08480	198	Disaggr_assoc: Disaggregatase related; InterPro: I	87.53
COG4677	405	PemB Pectin methylesterase [Carbohydrate transport	81.62
PF12541	277	DUF3737: Protein of unknown function (DUF3737) ; I	81.49
PF12541	277	DUF3737: Protein of unknown function (DUF3737) ; I	81.11

>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-61  Score=462.68  Aligned_cols=285  Identities=33%  Similarity=0.560  Sum_probs=240.2

Q ss_pred             CcccccC-------CCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec------ceeEeccCcceee
Q 016742           70 QAEGFGR-------LAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR------SHLSVSSYKTIDG  136 (383)
Q Consensus        70 ~aeGfg~-------~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~------~~l~V~snkTI~G  136 (383)
                      +.+|||+       +||||.+|++++|+|.+|     |..++++.+|.++|+.|.|+|+++      ..|+|.+||||+|
T Consensus        33 ~~~GfA~~~~~~~~GTtGG~~g~~v~v~ta~~-----l~~~~sa~~~~t~ii~v~Gti~~s~ps~~k~~iki~sNkTivG  107 (345)
T COG3866          33 SFAGFASNPAGSKTGTTGGSGGDIVTVRTAND-----LETYLSASGKYTVIIVVKGTITASTPSDKKITIKIGSNKTIVG  107 (345)
T ss_pred             cccccccccCCCCCCcccCCCCcEEEEeeHHH-----HHHHhhccCceEEEEEEcceEeccCCCCceEEEeeccccEEEe
Confidence            3678876       589999999999999999     999999999997777899999997      3577789999999


Q ss_pred             eccceEEeCCcEEEeeeccEEEeeeEEecCCCCC--CCceEecCCCceEEEEceeeec--------CCCCceEeecCCce
Q 016742          137 RGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPD--VDAIQIKPKSKHIWIDRCSLRD--------YDDGLIDITRESTD  206 (383)
Q Consensus       137 ~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~~~d--~DaI~i~~~s~nVwIDHcs~s~--------~~Dglidi~~~s~~  206 (383)
                      .|...+|.|++|.|+.+.|||||||+|++--..|  .|+|+|+..++|||||||+|..        ..||++|+++++++
T Consensus       108 ~g~~a~~~g~gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h~DGl~Dik~~Any  187 (345)
T COG3866         108 SGADATLVGGGLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSHGDGLVDIKKDANY  187 (345)
T ss_pred             eccccEEEeceEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccCCCccEEeccCCcE
Confidence            9999999999999999999999999999765434  4999996689999999999998        68999999999999


Q ss_pred             EEEeCceecCCCceeEecCCCCC-CCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEccccceeeecCC--ceEE
Q 016742          207 ITVSRCHFSSHDKTMLIGADPSH-VADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVD--SQIY  283 (383)
Q Consensus       207 VTIS~n~f~~H~k~~LiG~~d~~-~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~a~~~~~~--a~i~  283 (383)
                      ||||||+|++|+|.+|+|.+|+. ..|+..+||||||||+|+.+|+||+|||.+||+||||.....+++..+++  |+++
T Consensus       188 ITiS~n~fhdh~Kssl~G~sD~~~~~~~~~kvT~hhNyFkn~~qR~PriRfG~vHvyNNYy~~~~~~g~a~~iG~~Akiy  267 (345)
T COG3866         188 ITISYNKFHDHDKSSLLGSSDSSNYDDGKYKVTIHHNYFKNLYQRGPRIRFGMVHVYNNYYEGNPKFGVAITIGTSAKIY  267 (345)
T ss_pred             EEEEeeeeecCCeeeeeccCCcccccCCceeEEEeccccccccccCCceEeeEEEEeccccccCcccceEEeeccceEEE
Confidence            99999999999999999999864 45677999999999999999999999999999999999765555555555  9999


Q ss_pred             EEceEEecCCccceeeeeccccCCccccCcceEEecCCEEEccccccccccCCcccccCCCCCCCccccCChHHHHHHHH
Q 016742          284 SQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVL  363 (383)
Q Consensus       284 ~e~Nyf~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~~~~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl  363 (383)
                      +|+|||+....+..|  +.    ++  ..+||+..+-+.|++.+......  .+...|+|+++| +|++++++ .+|++|
T Consensus       268 vE~NyF~~~~~~~~f--~d----t~--~~~GY~~~d~gsy~~~s~~~~~~--~~G~~w~ps~~Y-~Ytvd~~~-dVks~V  335 (345)
T COG3866         268 VENNYFENGSEGLGF--LD----TK--GTSGYANQDSGSYLNSSKSMSVR--AGGVTWNPSSYY-SYTVDPPE-DVKSFV  335 (345)
T ss_pred             EecceeccCCCCcee--ee----cC--CccceEEeccCceecccCCcccc--cCCccCCCCCCc-ccccCChH-Hhhhhh
Confidence            999999998766544  21    11  12499885555555543321111  223689999999 59999985 689999


Q ss_pred             HhccCCCC
Q 016742          364 QHCTGWQD  371 (383)
Q Consensus       364 ~~~AG~q~  371 (383)
                      .++||+.+
T Consensus       336 t~yAGaGk  343 (345)
T COG3866         336 TNYAGAGK  343 (345)
T ss_pred             hcccccee
Confidence            99999875

>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4

Probab=100.00  E-value=1.5e-51  Score=382.39  Aligned_cols=177  Identities=46%  Similarity=0.750  Sum_probs=158.4

Q ss_pred             EEEEeceEEEecceeEeccCcceeeeccceEEeCCcEEEe-eeccEEEeeeEEecC----------C--CCCCCceEecC
Q 016742          112 IVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFEGG----------K--GPDVDAIQIKP  178 (383)
Q Consensus       112 IVf~vsG~I~l~~~l~V~snkTI~G~G~gi~I~G~gl~i~-~a~NVIIRnL~ir~g----------~--~~d~DaI~i~~  178 (383)
                      +||+++|+|+++.+|.|.|||||+|+|.+++|.+.|+++. +++|||||||+|+..          .  ..+.|+|+|+ 
T Consensus         3 ~ii~~~g~i~~~~~i~v~snkTi~G~g~~~~i~~~G~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~-   81 (200)
T PF00544_consen    3 LIIKVSGTIDLKSPISVGSNKTIIGIGAGATIIGGGLRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSDGDAISID-   81 (200)
T ss_dssp             EEEEEHHCCHHHCEEEEESSEEEEEETTTTEEESSEEEEEESCEEEEEES-EEECEEEECSTEEETTEEECS--SEEEE-
T ss_pred             EEEEEEeEEccCCeEEECCCcEEEEccCCeEEECceEEEecCCCeEEEECCEEEeccccCCcccCCCccccCCCeEEEE-
Confidence            4788999999999999999999999999999999999997 899999999999981          1  2568999998 


Q ss_pred             CCceEEEEceeeecC--------CCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCc
Q 016742          179 KSKHIWIDRCSLRDY--------DDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQR  250 (383)
Q Consensus       179 ~s~nVwIDHcs~s~~--------~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R  250 (383)
                      ++++||||||+|+|.        .||++|++.++++||||||+|.+|+|++|+|+++....|.+++||||||||+++.+|
T Consensus        82 ~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~~~~k~~l~G~~d~~~~~~~~~vT~hhN~f~~~~~R  161 (200)
T PF00544_consen   82 NSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFDNHNKTMLIGSSDSNSTDRGLRVTFHHNYFANTNSR  161 (200)
T ss_dssp             STEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEEEEEETCEESSCTTCGGGTTEEEEEES-EEEEEEE-
T ss_pred             ecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhccccccccccCCCCCccccCCceEEEEeEEECchhhC
Confidence            789999999999999        999999999999999999999999999999998776777779999999999999999


Q ss_pred             CCccccCeeEEEcceEEccccceeeecCCceEEEEceEE
Q 016742          251 HPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIY  289 (383)
Q Consensus       251 ~Pr~r~G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf  289 (383)
                      +||+|+|++|+|||||+++..|++++++++++++|+|||
T Consensus       162 ~P~~r~G~~Hv~NN~~~~~~~y~i~~~~~a~v~~E~N~F  200 (200)
T PF00544_consen  162 NPRVRFGYVHVYNNYYYNWSGYAIGARSGAQVLVENNYF  200 (200)
T ss_dssp             TTEECSCEEEEES-EEEEECSESEEEETTEEEEEES-EE
T ss_pred             CCcccccEEEEEEeeeECCCCEEEEccCCeEEEEECcCC
Confidence            999999999999999999999999999999999999999

2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....

>smart00656 Amb_all Amb_all domain

Probab=100.00  E-value=1.4e-47  Score=353.16  Aligned_cols=168  Identities=45%  Similarity=0.699  Sum_probs=157.3

Q ss_pred             ceeEeccCcceeeeccceEEeCCcEEEeeeccEEEeeeEEecCCC---CCCCceEecCCCceEEEEceeeecC-------
Q 016742          124 SHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKG---PDVDAIQIKPKSKHIWIDRCSLRDY-------  193 (383)
Q Consensus       124 ~~l~V~snkTI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~~---~d~DaI~i~~~s~nVwIDHcs~s~~-------  193 (383)
                      .+|.|+|||||+|+|++++|.|.+|++.+++|||||||+|+++..   .+.|+|+++ ++++||||||+|+|.       
T Consensus        10 ~~i~v~snkTI~G~~~~~~i~g~gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~-~~~~VwIDHct~s~~~~~~~~~   88 (190)
T smart00656       10 GTIIINSNKTIDGRGSKVEIKGGGLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISID-GSSNVWIDHVSLSGCTVTGFGD   88 (190)
T ss_pred             ceEEeCCCCEEEecCCCcEEEeeEEEEEecceEEEeCCEEECCccCCCCCCCEEEEe-CCCeEEEEccEeEcceeccCCC
Confidence            468899999999999999999999999889999999999998764   568999997 799999999999998       


Q ss_pred             --CCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEcccc
Q 016742          194 --DDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGI  271 (383)
Q Consensus       194 --~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~  271 (383)
                        .|+++|++.++++||||||+|.+|+|++|||+++....+..++||||||||+++.+|+||+|+|++|++||||++|..
T Consensus        89 ~~~D~~~di~~~s~~vTvs~~~f~~h~~~~liG~~d~~~~~~~~~vT~h~N~~~~~~~R~P~~r~g~~hv~NN~~~n~~~  168 (190)
T smart00656       89 DTYDGLIDIKNGSTYVTISNNYFHNHWKVMLLGHSDSDTDDGKMRVTIAHNYFGNLRQRAPRVRFGYVHVYNNYYTGWTS  168 (190)
T ss_pred             CCCCccEEECcccccEEEECceEecCCEEEEEccCCCccccccceEEEECcEEcCcccCCCcccCCEEEEEeeEEeCccc
Confidence              899999999999999999999999999999998766555578999999999999999999999999999999999998


Q ss_pred             ceeeecCCceEEEEceEEecC
Q 016742          272 YAVCASVDSQIYSQCNIYEAG  292 (383)
Q Consensus       272 ~a~~~~~~a~i~~e~Nyf~~g  292 (383)
                      |+++++.++++++|+|||+..
T Consensus       169 ~~~~~~~~~~v~~E~N~F~~~  189 (190)
T smart00656      169 YAIGGRMGATILSEGNYFEAP  189 (190)
T ss_pred             EeEecCCCcEEEEECeEEECC
Confidence            999999999999999999864

>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein

Probab=99.14  E-value=4.4e-09  Score=104.38  Aligned_cols=119  Identities=26%  Similarity=0.322  Sum_probs=78.6

Q ss_pred             HHHhhhcCCCeEEEEEeceEEEecceeEec-cCcceeeeccc-eEEe-------CCcEEEeeeccEEEeeeEEecCCCCC
Q 016742          100 LREGCRMKEPLWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQR-VKLT-------GKGLRLKECEHVIICNLEFEGGKGPD  170 (383)
Q Consensus       100 Lr~ai~~~~Pr~IVf~vsG~I~l~~~l~V~-snkTI~G~G~g-i~I~-------G~gl~i~~a~NVIIRnL~ir~g~~~d  170 (383)
                      |++|+.+..|..+|+--.|+..++..|.|. +++||.|.|.. ..|.       +.+|.+. ++||.|++|+++...   
T Consensus         1 iQ~Ai~~A~~GDtI~l~~G~Y~~~~~l~I~~~~Iti~G~g~~~tvid~~~~~~~~~~i~v~-a~~VtI~~ltI~~~~---   76 (314)
T TIGR03805         1 LQEALIAAQPGDTIVLPEGVFQFDRTLSLDADGVTIRGAGMDETILDFSGQVGGAEGLLVT-SDDVTLSDLAVENTK---   76 (314)
T ss_pred             CHhHHhhCCCCCEEEECCCEEEcceeEEEeCCCeEEEecCCCccEEecccCCCCCceEEEE-eCCeEEEeeEEEcCC---
Confidence            678898888876665578999888888887 89999998753 4443       2346554 788888888887642   


Q ss_pred             CCceEecCCCceEEEEceeeecC--------CCCceEeecCCceEEEeCceecC-CCceeEecC
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRDY--------DDGLIDITRESTDITVSRCHFSS-HDKTMLIGA  225 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~~--------~Dglidi~~~s~~VTIS~n~f~~-H~k~~LiG~  225 (383)
                      .+||.+. +++++.|++|.+.|.        .+| |.+ ..+.+++|.+|.++. .+.++.++.
T Consensus        77 ~~GI~v~-~s~~i~I~n~~i~~~~~~~~~~~~~G-I~~-~~s~~v~I~~n~i~g~~d~GIyv~~  137 (314)
T TIGR03805        77 GDGVKVK-GSDGIIIRRLRVEWTGGPKSSNGAYG-IYP-VESTNVLVEDSYVRGASDAGIYVGQ  137 (314)
T ss_pred             CCeEEEe-CCCCEEEEeeEEEeccCccccCCcce-EEE-eccCCEEEECCEEECCCcccEEECC
Confidence            3566665 566777777776643        334 333 246666777776654 233444443

Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.

>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A

Probab=98.92  E-value=1.2e-08  Score=104.25  Aligned_cols=193  Identities=17%  Similarity=0.230  Sum_probs=96.6

Q ss_pred             ecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEecceeEec------cCcceeee-ccceEEeCC-cEEEeeeccEEEee
Q 016742           89 VTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVS------SYKTIDGR-GQRVKLTGK-GLRLKECEHVIICN  160 (383)
Q Consensus        89 VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~~~l~V~------snkTI~G~-G~gi~I~G~-gl~i~~a~NVIIRn  160 (383)
                      |+|+++     |++||++..|...|+-.+|+.+ ...|.+.      ..+||..+ ..++.|.|. .|+|. ++.++|.+
T Consensus         1 Vss~~~-----lq~Ai~~a~pGD~I~L~~Gty~-~~~i~~~~~GT~~~PItl~Ae~~G~vvi~G~s~l~i~-G~yl~v~G   73 (425)
T PF14592_consen    1 VSSVAE-----LQSAIDNAKPGDTIVLADGTYK-DVEIVFKGSGTAAKPITLRAENPGKVVITGESNLRIS-GSYLVVSG   73 (425)
T ss_dssp             E-SHHH-----HHHHHHH--TT-EEEE-SEEEE-T-EEEE-S--BTTB-EEEEESSTTSEEEEES-EEEE--SSSEEEES
T ss_pred             CCCHHH-----HHHHHHhCCCCCEEEECCceee-cceEEEEecccCCCCEEEEecCCCeEEEecceeEEEE-eeeEEEeC
Confidence            566666     9999998887766666889997 3355552      45788887 457788876 47886 79999999


Q ss_pred             eEEecCCCCC---------CC-------------------------ceEe---cCCCceEEEEceeeecC--CCCceEee
Q 016742          161 LEFEGGKGPD---------VD-------------------------AIQI---KPKSKHIWIDRCSLRDY--DDGLIDIT  201 (383)
Q Consensus       161 L~ir~g~~~d---------~D-------------------------aI~i---~~~s~nVwIDHcs~s~~--~Dglidi~  201 (383)
                      |.|+.+....         .+                         ...+   .-.+++--||||.|..-  ..-+|-+.
T Consensus        74 L~F~ng~~~~~~vi~fr~~~~~~~a~~~RlT~~vi~~fn~~~~~~~~~wv~~~~l~G~~NrvDhn~F~gK~~~G~~l~V~  153 (425)
T PF14592_consen   74 LKFKNGYTPTGAVISFRNGGDASYANHCRLTNCVIDDFNNPDREESDNWVTIYSLYGKHNRVDHNYFQGKTNRGPTLAVR  153 (425)
T ss_dssp             -EEEEE---TTT--TTS--SEEE-SSS-EEES-EEES--SS-S-SEEE---TT-----S-EEES-EEE---SSS-SEEE-
T ss_pred             eEEecCCCCCCceEEeecCCCcceecceEEEeEEeeccCCcccccCceEEEEEEeeccCceEEccEeeccccCCcEEEEE
Confidence            9998642100         00                         1111   00134445699999752  23333332


Q ss_pred             -------cCCceEEEeCceecC-------CCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCcc--ccCeeEEEcce
Q 016742          202 -------RESTDITVSRCHFSS-------HDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRV--RYAKVHLYNNY  265 (383)
Q Consensus       202 -------~~s~~VTIS~n~f~~-------H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~--r~G~~hv~NN~  265 (383)
                             ....+-+|.+|+|..       ...++-||.+...-.+  -+.++.+|||.+|.+-.=-+  +.+..-++||.
T Consensus       154 ~~~~~~~~~~~~h~IdhNyF~~rp~~g~NggEtIRiG~S~~S~~~--s~t~Ve~NlFe~cdGE~EIISvKS~~N~ir~Nt  231 (425)
T PF14592_consen  154 VILNGSQSIANYHRIDHNYFGPRPPKGGNGGETIRIGTSHSSMSD--SNTTVENNLFERCDGEVEIISVKSSDNTIRNNT  231 (425)
T ss_dssp             -S--SS-------EEES-EEE-E---SSS---SEEE-SSTT-B-------EEES-EEEEE-SSSEEEEEESBT-EEES-E
T ss_pred             ecccCccccccCceEEeccccccCCCCCCCceeEEEecccccccc--cceeeecchhhhcCCceeEEEeecCCceEeccE
Confidence                   124577899999983       4557888876432222  37899999999998875444  34566777887


Q ss_pred             EEccccceeeecCCceEEEEceEEec
Q 016742          266 TRNWGIYAVCASVDSQIYSQCNIYEA  291 (383)
Q Consensus       266 ~~n~~~~a~~~~~~a~i~~e~Nyf~~  291 (383)
                      |++... ++..+-+-.-.+++|||..
T Consensus       232 f~es~G-~ltlRHGn~n~V~gN~FiG  256 (425)
T PF14592_consen  232 FRESQG-SLTLRHGNRNTVEGNVFIG  256 (425)
T ss_dssp             EES-SS-EEEEEE-SS-EEES-EEEE
T ss_pred             EEeccc-eEEEecCCCceEeccEEec
Confidence            777542 3333433344445666654

>PLN02218 polygalacturonase ADPG

Probab=98.28  E-value=1.5e-05  Score=82.66  Aligned_cols=103  Identities=19%  Similarity=0.337  Sum_probs=75.2

Q ss_pred             EEeeeccEEEeeeEEecC-CCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCC
Q 016742          149 RLKECEHVIICNLEFEGG-KGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADP  227 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g-~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d  227 (383)
                      .+..++||+|++|+|... .....|||.+. .++||+|.+|.+.-+.| +|.++.++++|+|++|.+. +..++-||+..
T Consensus       219 ~~~~~~nV~i~~v~I~a~~~spNTDGIdi~-ss~nV~I~n~~I~tGDD-cIaIksgs~nI~I~n~~c~-~GHGisIGS~g  295 (431)
T PLN02218        219 SIEKCSNVQVSNVVVTAPADSPNTDGIHIT-NTQNIRVSNSIIGTGDD-CISIESGSQNVQINDITCG-PGHGISIGSLG  295 (431)
T ss_pred             EEEceeeEEEEEEEEeCCCCCCCCCcEeec-ccceEEEEccEEecCCc-eEEecCCCceEEEEeEEEE-CCCCEEECcCC
Confidence            334567777777777653 23457999997 79999999999998866 5899999999999999995 34467788754


Q ss_pred             CCC-CCcceeEEEeceeecCCCCcCCccc
Q 016742          228 SHV-ADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       228 ~~~-~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                      ... .+.-.+|++.++.|.++. +.=|++
T Consensus       296 ~~~~~~~V~nV~v~n~~~~~t~-nGvRIK  323 (431)
T PLN02218        296 DDNSKAFVSGVTVDGAKLSGTD-NGVRIK  323 (431)
T ss_pred             CCCCCceEEEEEEEccEEecCC-cceEEe
Confidence            221 223358999999887753 444554

>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A

Probab=98.25  E-value=2.3e-05  Score=67.33  Aligned_cols=133  Identities=18%  Similarity=0.267  Sum_probs=88.6

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCC
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD  226 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~  226 (383)
                      ||.+.+..++.|++.+|+..   ..+||.+. .+..+.|+.|+|.+...+ |.+. ...+++|++|.|.+...+..+-..
T Consensus         2 Gi~i~~~~~~~i~~~~i~~~---~~~gi~~~-~~~~~~i~n~~i~~~~~g-i~~~-~~~~~~i~~~~~~~~~~~i~~~~~   75 (158)
T PF13229_consen    2 GISINNGSNVTIRNCTISNN---GGDGIHVS-GSSNITIENCTISNGGYG-IYVS-GGSNVTISNNTISDNGSGIYVSGS   75 (158)
T ss_dssp             CEEETTCEC-EEESEEEESS---SSECEEE--SSCESEEES-EEESSTTS-EEEE-CCES-EEES-EEES-SEEEECCS-
T ss_pred             EEEEECCcCeEEeeeEEEeC---CCeEEEEE-cCCCeEEECeEEECCCcE-EEEe-cCCCeEEECeEEEEccceEEEEec
Confidence            57787788899999999975   46899997 677789999999995555 6664 458999999999987744444322


Q ss_pred             CCCCCCcceeEEEeceeecCCCCcCCccc--cCeeEEEcceEEccccceeeecCCc--eEEEEceEEecCC
Q 016742          227 PSHVADRCIRVTIHHCFFDGTRQRHPRVR--YAKVHLYNNYTRNWGIYAVCASVDS--QIYSQCNIYEAGQ  293 (383)
Q Consensus       227 d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r--~G~~hv~NN~~~n~~~~a~~~~~~a--~i~~e~Nyf~~g~  293 (383)
                              .++++.+|.|.++..-.=.+.  ...+.+.||.+.+-...++......  .+.+++|.|....
T Consensus        76 --------~~~~i~~~~i~~~~~~gi~~~~~~~~~~i~~n~~~~~~~~gi~~~~~~~~~~~i~~n~i~~~~  138 (158)
T PF13229_consen   76 --------SNITIENNRIENNGDYGIYISNSSSNVTIENNTIHNNGGSGIYLEGGSSPNVTIENNTISNNG  138 (158)
T ss_dssp             --------CS-EEES-EEECSSS-SCE-TCEECS-EEES-EEECCTTSSCEEEECC--S-EEECEEEECES
T ss_pred             --------CCceecCcEEEcCCCccEEEeccCCCEEEEeEEEEeCcceeEEEECCCCCeEEEEEEEEEeCc
Confidence                    267888888887755433332  2357899999988776676666555  8888999988654

>PLN03003 Probable polygalacturonase At3g15720

Probab=98.24  E-value=3.7e-05  Score=80.07  Aligned_cols=102  Identities=25%  Similarity=0.452  Sum_probs=74.6

Q ss_pred             EeeeccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCCC
Q 016742          150 LKECEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPS  228 (383)
Q Consensus       150 i~~a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~  228 (383)
                      +..++||.|++|+|.... ....|||.+. .++||+|.+|.+..+.|. |.++.++++|+|++|.+.. ..++-||+...
T Consensus       166 i~~c~nV~i~~l~I~ap~~spNTDGIDi~-~S~nV~I~n~~I~tGDDC-Iaiksgs~NI~I~n~~c~~-GHGISIGSlg~  242 (456)
T PLN03003        166 ISECNYVTISSLRINAPESSPNTDGIDVG-ASSNVVIQDCIIATGDDC-IAINSGTSNIHISGIDCGP-GHGISIGSLGK  242 (456)
T ss_pred             EeccccEEEEEEEEeCCCCCCCCCcEeec-CcceEEEEecEEecCCCe-EEeCCCCccEEEEeeEEEC-CCCeEEeeccC
Confidence            334666666666666542 3457999997 799999999999988776 8999899999999999853 34677887543


Q ss_pred             CC-CCcceeEEEeceeecCCCCcCCccc
Q 016742          229 HV-ADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       229 ~~-~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                      .. .+.-.+|++.++.|.++. +.=|++
T Consensus       243 ~g~~~~V~NV~v~n~~~~~T~-nGvRIK  269 (456)
T PLN03003        243 DGETATVENVCVQNCNFRGTM-NGARIK  269 (456)
T ss_pred             CCCcceEEEEEEEeeEEECCC-cEEEEE
Confidence            21 223468999999998863 334554

>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein

Probab=98.22  E-value=7.4e-05  Score=77.25  Aligned_cols=111  Identities=15%  Similarity=0.179  Sum_probs=74.6

Q ss_pred             chHHHhhhcCC-CeEEEEEeceEEEecceeEeccCcceeeeccceE---EeCCc-EE-EeeeccEEEeeeEEecCCC---
Q 016742           98 GSLREGCRMKE-PLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVK---LTGKG-LR-LKECEHVIICNLEFEGGKG---  168 (383)
Q Consensus        98 GSLr~ai~~~~-Pr~IVf~vsG~I~l~~~l~V~snkTI~G~G~gi~---I~G~g-l~-i~~a~NVIIRnL~ir~g~~---  168 (383)
                      ..|++||++.. +...|.--.|+. +..+|.+.+++||.|+. +++   |.|.+ +. -..++||.|++|+|++...   
T Consensus        55 ~ALQaAIdaAa~gG~tV~Lp~G~Y-~~G~L~L~spltL~G~~-gAt~~vIdG~~~lIiai~A~nVTIsGLtIdGsG~dl~  132 (455)
T TIGR03808        55 RALQRAIDEAARAQTPLALPPGVY-RTGPLRLPSGAQLIGVR-GATRLVFTGGPSLLSSEGADGIGLSGLTLDGGGIPLP  132 (455)
T ss_pred             HHHHHHHHHhhcCCCEEEECCCce-ecccEEECCCcEEEecC-CcEEEEEcCCceEEEEecCCCeEEEeeEEEeCCCccc
Confidence            34999987633 222222256776 34779999999999984 443   66554 32 2359999999999997532   


Q ss_pred             CCCCceEecCCCceEEEEceeeecCC-CCceEeecCCceEEEeCcee
Q 016742          169 PDVDAIQIKPKSKHIWIDRCSLRDYD-DGLIDITRESTDITVSRCHF  214 (383)
Q Consensus       169 ~d~DaI~i~~~s~nVwIDHcs~s~~~-Dglidi~~~s~~VTIS~n~f  214 (383)
                      ...-+|.+. +++++-|.+|.|.... .| |++. +++ ..|++|.|
T Consensus       133 ~rdAgI~v~-~a~~v~Iedn~L~gsg~FG-I~L~-~~~-~~I~~N~I  175 (455)
T TIGR03808       133 QRRGLIHCQ-GGRDVRITDCEITGSGGNG-IWLE-TVS-GDISGNTI  175 (455)
T ss_pred             CCCCEEEEc-cCCceEEEeeEEEcCCcce-EEEE-cCc-ceEecceE
Confidence            234577885 8999999999999984 77 5663 355 44444433

Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.

>PLN02793 Probable polygalacturonase

Probab=98.20  E-value=2.7e-05  Score=80.99  Aligned_cols=104  Identities=22%  Similarity=0.358  Sum_probs=75.8

Q ss_pred             EEEeeeccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCC
Q 016742          148 LRLKECEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD  226 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~  226 (383)
                      |.+..++||.|++|+|.... ....|||.+. .++||+|.+|.+..+.|. |.++.++++|+|++|.+. +..++-||+.
T Consensus       203 i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~-~s~nV~I~n~~I~~gDDc-Iaik~~s~nI~I~n~~c~-~GhGisIGSl  279 (443)
T PLN02793        203 IAFTNCRRVTISGLKVIAPATSPNTDGIHIS-ASRGVVIKDSIVRTGDDC-ISIVGNSSRIKIRNIACG-PGHGISIGSL  279 (443)
T ss_pred             EEEEccCcEEEEEEEEECCCCCCCCCcEeee-ccceEEEEeCEEeCCCCe-EEecCCcCCEEEEEeEEe-CCccEEEecc
Confidence            44456777888888877543 3467999997 899999999999877665 889888999999999985 3345778875


Q ss_pred             CC-CCCCcceeEEEeceeecCCCCcCCccc
Q 016742          227 PS-HVADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       227 d~-~~~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                      .. .....-.+|++.++.|.++. +.=|++
T Consensus       280 g~~~~~~~V~nV~v~n~~~~~t~-~GirIK  308 (443)
T PLN02793        280 GKSNSWSEVRDITVDGAFLSNTD-NGVRIK  308 (443)
T ss_pred             cCcCCCCcEEEEEEEccEEeCCC-ceEEEE
Confidence            32 12222358999999988764 444553

>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein

Probab=98.17  E-value=0.00014  Score=72.34  Aligned_cols=152  Identities=15%  Similarity=0.179  Sum_probs=98.0

Q ss_pred             cCcceeeeccceEEe---CCcEEEeeeccEEEeeeEEecCCC----CCCCceEecCCCceEEEEceeeecCCCCceEeec
Q 016742          130 SYKTIDGRGQRVKLT---GKGLRLKECEHVIICNLEFEGGKG----PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR  202 (383)
Q Consensus       130 snkTI~G~G~gi~I~---G~gl~i~~a~NVIIRnL~ir~g~~----~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~  202 (383)
                      +++||.+.    +|.   +.+|.+.+++|++||++++.....    ...+||.+. .++++.|.+|.++...|--|.+ .
T Consensus        63 ~~VtI~~l----tI~~~~~~GI~v~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~-~s~~v~I~~n~i~g~~d~GIyv-~  136 (314)
T TIGR03805        63 DDVTLSDL----AVENTKGDGVKVKGSDGIIIRRLRVEWTGGPKSSNGAYGIYPV-ESTNVLVEDSYVRGASDAGIYV-G  136 (314)
T ss_pred             CCeEEEee----EEEcCCCCeEEEeCCCCEEEEeeEEEeccCccccCCcceEEEe-ccCCEEEECCEEECCCcccEEE-C
Confidence            56677665    222   347888889999999999974421    236889987 7999999999999887744666 4


Q ss_pred             CCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcC--------CccccCeeEEEcceEEcccc---
Q 016742          203 ESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRH--------PRVRYAKVHLYNNYTRNWGI---  271 (383)
Q Consensus       203 ~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~--------Pr~r~G~~hv~NN~~~n~~~---  271 (383)
                      .+++++|++|.+.+..+++.+-.+.        ++.+.+|.+.++..--        |.+....+.++||.+.+...   
T Consensus       137 ~s~~~~v~nN~~~~n~~GI~i~~S~--------~~~v~~N~~~~N~~Gi~v~~~p~~~~~~s~~~~v~~N~i~~n~~~n~  208 (314)
T TIGR03805       137 QSQNIVVRNNVAEENVAGIEIENSQ--------NADVYNNIATNNTGGILVFDLPGLPQPGGSNVRVFDNIIFDNNTPNF  208 (314)
T ss_pred             CCCCeEEECCEEccCcceEEEEecC--------CcEEECCEEeccceeEEEeecCCCCcCCccceEEECCEEECCCCCCC
Confidence            6889999999998766776655432        3556666665543211        11112346677776653211   


Q ss_pred             -------------ceeeecCCceEEEEceEEecCCcc
Q 016742          272 -------------YAVCASVDSQIYSQCNIYEAGQKK  295 (383)
Q Consensus       272 -------------~a~~~~~~a~i~~e~Nyf~~g~~~  295 (383)
                                   .++.......+.+++|.|......
T Consensus       209 ~~~gn~v~~~~~g~Gi~i~~~~~v~I~~N~i~~n~~~  245 (314)
T TIGR03805       209 APAGSIVASVPAGTGVVVMANRDVEIFGNVISNNDTA  245 (314)
T ss_pred             cccCCceecCCCCcEEEEEcccceEEECCEEeCCcce
Confidence                         122222235677888988876544

Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.

>PLN02218 polygalacturonase ADPG

Probab=98.15  E-value=0.00018  Score=74.58  Aligned_cols=136  Identities=18%  Similarity=0.192  Sum_probs=92.7

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |++.+++||.|++|+|+....   =.|.+. .+++|+|++.++..     ..|| ||+ ..+++|+|++|.|..-+-+.-
T Consensus       195 i~f~~~~nv~I~gitl~nSp~---w~i~~~-~~~nV~i~~v~I~a~~~spNTDG-Idi-~ss~nV~I~n~~I~tGDDcIa  268 (431)
T PLN02218        195 LTFYNSKSLIVKNLRVRNAQQ---IQISIE-KCSNVQVSNVVVTAPADSPNTDG-IHI-TNTQNIRVSNSIIGTGDDCIS  268 (431)
T ss_pred             EEEEccccEEEeCeEEEcCCC---EEEEEE-ceeeEEEEEEEEeCCCCCCCCCc-Eee-cccceEEEEccEEecCCceEE
Confidence            566789999999999998654   357776 79999999999864     6899 899 468999999999998887777


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCCCCcCCccc----------cCeeEEEcceEEccccceee-----e--cCCceEEEE
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR----------YAKVHLYNNYTRNWGIYAVC-----A--SVDSQIYSQ  285 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r----------~G~~hv~NN~~~n~~~~a~~-----~--~~~a~i~~e  285 (383)
                      |.+..       .+|++.++++.....  =.+.          .-.++|.|+.+.+.. +++.     +  +.-..|.++
T Consensus       269 Iksgs-------~nI~I~n~~c~~GHG--isIGS~g~~~~~~~V~nV~v~n~~~~~t~-nGvRIKT~~Gg~G~v~nI~f~  338 (431)
T PLN02218        269 IESGS-------QNVQINDITCGPGHG--ISIGSLGDDNSKAFVSGVTVDGAKLSGTD-NGVRIKTYQGGSGTASNIIFQ  338 (431)
T ss_pred             ecCCC-------ceEEEEeEEEECCCC--EEECcCCCCCCCceEEEEEEEccEEecCC-cceEEeecCCCCeEEEEEEEE
Confidence            76531       378888887743222  0111          013567777766643 2331     1  122356677


Q ss_pred             ceEEecCCccceee
Q 016742          286 CNIYEAGQKKMAFK  299 (383)
Q Consensus       286 ~Nyf~~g~~~~~~~  299 (383)
                      +..+++...+..++
T Consensus       339 ni~m~~V~~pI~Id  352 (431)
T PLN02218        339 NIQMENVKNPIIID  352 (431)
T ss_pred             eEEEEcccccEEEE
Confidence            77777766555443

>PLN02155 polygalacturonase

Probab=98.13  E-value=3.4e-05  Score=79.13  Aligned_cols=102  Identities=18%  Similarity=0.346  Sum_probs=75.4

Q ss_pred             EEeeeccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCC
Q 016742          149 RLKECEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADP  227 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d  227 (383)
                      .+..++||.|++|+|.... ....|||.+. .+++|+|.+|.+..+.|. |.++.++++|+|++|.+.. ..++-||+..
T Consensus       172 ~~~~~~nv~i~~v~I~~p~~~~NtDGidi~-~s~nV~I~~~~I~~gDDc-Iaik~gs~nI~I~n~~c~~-GhGisIGS~g  248 (394)
T PLN02155        172 TLNGCTNVVVRNVKLVAPGNSPNTDGFHVQ-FSTGVTFTGSTVQTGDDC-VAIGPGTRNFLITKLACGP-GHGVSIGSLA  248 (394)
T ss_pred             EEECeeeEEEEEEEEECCCCCCCCCccccc-cceeEEEEeeEEecCCce-EEcCCCCceEEEEEEEEEC-CceEEecccc
Confidence            3345677777777776532 3557999997 799999999999988885 8998889999999998863 4467789853


Q ss_pred             CC-CCCcceeEEEeceeecCCCCcCCcc
Q 016742          228 SH-VADRCIRVTIHHCFFDGTRQRHPRV  254 (383)
Q Consensus       228 ~~-~~d~~~~VT~hhN~f~~~~~R~Pr~  254 (383)
                      .. ....-.+|++.+|.|.++. |.=|+
T Consensus       249 ~~~~~~~V~nV~v~n~~~~~t~-~GirI  275 (394)
T PLN02155        249 KELNEDGVENVTVSSSVFTGSQ-NGVRI  275 (394)
T ss_pred             ccCCCCcEEEEEEEeeEEeCCC-cEEEE
Confidence            22 1233458999999998763 34444

>PLN02188 polygalacturonase/glycoside hydrolase family protein

Probab=98.13  E-value=4.2e-05  Score=78.67  Aligned_cols=95  Identities=21%  Similarity=0.409  Sum_probs=70.7

Q ss_pred             eeeccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCCC-
Q 016742          151 KECEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPS-  228 (383)
Q Consensus       151 ~~a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~-  228 (383)
                      ..++||.|++|+|.... ....|||.+. .+++|+|.+|.+..+.| +|.++.++++|+|++|... +..++-||+-.. 
T Consensus       184 ~~~~~v~i~~v~I~~~~~spNtDGidi~-~s~nV~I~n~~I~~GDD-cIaiksg~~nI~I~n~~c~-~ghGisiGSlG~~  260 (404)
T PLN02188        184 VECRNFKGSGLKISAPSDSPNTDGIHIE-RSSGVYISDSRIGTGDD-CISIGQGNSQVTITRIRCG-PGHGISVGSLGRY  260 (404)
T ss_pred             EccccEEEEEEEEeCCCCCCCCCcEeee-CcccEEEEeeEEeCCCc-EEEEccCCccEEEEEEEEc-CCCcEEeCCCCCC
Confidence            34667777777776432 3457999997 79999999999998888 5899888999999999885 445677887432 


Q ss_pred             CCCCcceeEEEeceeecCCC
Q 016742          229 HVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       229 ~~~d~~~~VT~hhN~f~~~~  248 (383)
                      .....-.+|++.++.|.++.
T Consensus       261 ~~~~~V~nV~v~n~~~~~t~  280 (404)
T PLN02188        261 PNEGDVTGLVVRDCTFTGTT  280 (404)
T ss_pred             CcCCcEEEEEEEeeEEECCC
Confidence            11122358999999998763

>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A

Probab=98.11  E-value=0.0001  Score=67.54  Aligned_cols=102  Identities=19%  Similarity=0.274  Sum_probs=66.1

Q ss_pred             hHHHhh--hcCCCeEEEEEeceEEEecceeEeccCcceeeeccce-EEe--CCc--E-------EEeee-cc--EEEeee
Q 016742           99 SLREGC--RMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRV-KLT--GKG--L-------RLKEC-EH--VIICNL  161 (383)
Q Consensus        99 SLr~ai--~~~~Pr~IVf~vsG~I~l~~~l~V~snkTI~G~G~gi-~I~--G~g--l-------~i~~a-~N--VIIRnL  161 (383)
                      .|++||  .+....-+|+-..|+..++..|.+.++++|.|.|... .+.  +..  +       .+... .+  +-|+||
T Consensus        20 Aiq~Ai~~~~~~~g~~v~~P~G~Y~i~~~l~~~s~v~l~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~nl   99 (225)
T PF12708_consen   20 AIQAAIDAAAAAGGGVVYFPPGTYRISGTLIIPSNVTLRGAGGNSTILFLSGSGDSFSVVPGIGVFDSGNSNIGIQIRNL   99 (225)
T ss_dssp             HHHHHHHHHCSTTSEEEEE-SEEEEESS-EEE-TTEEEEESSTTTEEEEECTTTSTSCCEEEEEECCSCSCCEEEEEEEE
T ss_pred             HHHHhhhhcccCCCeEEEEcCcEEEEeCCeEcCCCeEEEccCCCeeEEEecCcccccccccceeeeecCCCCceEEEEee
Confidence            489999  3333344556589999999999999999999997633 333  111  1       11111 12  449999


Q ss_pred             EEecCCCC---CCCceEecCCCceEEEEceeeecCCCCceEee
Q 016742          162 EFEGGKGP---DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDIT  201 (383)
Q Consensus       162 ~ir~g~~~---d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~  201 (383)
                      +|......   ..++|.+. .++++||++|++.......+.+.
T Consensus       100 ~i~~~~~~~~~~~~~i~~~-~~~~~~i~nv~~~~~~~~~i~~~  141 (225)
T PF12708_consen  100 TIDGNGIDPNNNNNGIRFN-SSQNVSISNVRIENSGGDGIYFN  141 (225)
T ss_dssp             EEEETCGCE-SCEEEEEET-TEEEEEEEEEEEES-SS-SEEEE
T ss_pred             EEEcccccCCCCceEEEEE-eCCeEEEEeEEEEccCccEEEEE
Confidence            99976532   24778886 78999999999998654445654

...

>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3

Probab=97.89  E-value=5.3e-05  Score=75.58  Aligned_cols=105  Identities=28%  Similarity=0.488  Sum_probs=76.7

Q ss_pred             cEEEeeeccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecC
Q 016742          147 GLRLKECEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGA  225 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~  225 (383)
                      .+.+..++||.|++|+|+... ....|||.+. ++++|.|++|.+....|. |.++.++.+|+|++|.|. +..++-||+
T Consensus       117 ~~~~~~~~nv~i~~i~I~~~~~~~NtDGid~~-~s~nv~I~n~~i~~gDD~-Iaiks~~~ni~v~n~~~~-~ghGisiGS  193 (326)
T PF00295_consen  117 HIHINDCDNVTISNITINNPANSPNTDGIDID-SSKNVTIENCFIDNGDDC-IAIKSGSGNILVENCTCS-GGHGISIGS  193 (326)
T ss_dssp             SEEEESEEEEEEESEEEEEGGGCTS--SEEEE-SEEEEEEESEEEESSSES-EEESSEECEEEEESEEEE-SSSEEEEEE
T ss_pred             EEEEEccCCeEEcceEEEecCCCCCcceEEEE-eeeEEEEEEeecccccCc-ccccccccceEEEeEEEe-ccccceeee
Confidence            366667999999999998653 2457999997 789999999999887665 889877789999999996 345577786


Q ss_pred             CCCCC-CCcceeEEEeceeecCCCCcCCccc
Q 016742          226 DPSHV-ADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       226 ~d~~~-~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                      ..... ...-.+|+|.++.|.++. |.-|++
T Consensus       194 ~~~~~~~~~i~nV~~~n~~i~~t~-~gi~iK  223 (326)
T PF00295_consen  194 EGSGGSQNDIRNVTFENCTIINTD-NGIRIK  223 (326)
T ss_dssp             ESSSSE--EEEEEEEEEEEEESES-EEEEEE
T ss_pred             ccCCccccEEEeEEEEEEEeeccc-eEEEEE
Confidence            43221 111248999999888763 555553

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....

>PLN03010 polygalacturonase

Probab=97.86  E-value=0.0027  Score=65.55  Aligned_cols=99  Identities=23%  Similarity=0.422  Sum_probs=63.3

Q ss_pred             eccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCCCC-C
Q 016742          153 CEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH-V  230 (383)
Q Consensus       153 a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~-~  230 (383)
                      ++||.|++|+|.... ....|||.+. .+++|+|.+|.+..+.|. |.++.++++++|.++... ...++-||+.... .
T Consensus       188 ~~nv~i~~i~I~a~~~s~NTDGiDi~-~s~nV~I~n~~I~~gDDc-Iaiksgs~ni~I~~~~C~-~gHGisIGS~g~~~~  264 (409)
T PLN03010        188 CNYVAISKINILAPETSPNTDGIDIS-YSTNINIFDSTIQTGDDC-IAINSGSSNINITQINCG-PGHGISVGSLGADGA  264 (409)
T ss_pred             cccEEEEEEEEeCCCCCCCCCceeee-ccceEEEEeeEEecCCCe-EEecCCCCcEEEEEEEeE-CcCCEEEccCCCCCC
Confidence            344444444444321 2457999997 799999999999888655 899888777777655553 2335667875322 1


Q ss_pred             CCcceeEEEeceeecCCCCcCCccc
Q 016742          231 ADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       231 ~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                      .+.-.+|++.++.|.++. +.=|++
T Consensus       265 ~~~V~nV~v~n~~i~~t~-~GirIK  288 (409)
T PLN03010        265 NAKVSDVHVTHCTFNQTT-NGARIK  288 (409)
T ss_pred             CCeeEEEEEEeeEEeCCC-cceEEE
Confidence            222358999999887753 334443

>PLN03010 polygalacturonase

Probab=97.85  E-value=0.00071  Score=69.83  Aligned_cols=172  Identities=22%  Similarity=0.281  Sum_probs=108.1

Q ss_pred             EEEEeceEEEecce------------eEec--cCcceeeeccceEEeCCc------EEEeeeccEEEeeeEEecCCCCCC
Q 016742          112 IVFEVSGTIHLRSH------------LSVS--SYKTIDGRGQRVKLTGKG------LRLKECEHVIICNLEFEGGKGPDV  171 (383)
Q Consensus       112 IVf~vsG~I~l~~~------------l~V~--snkTI~G~G~gi~I~G~g------l~i~~a~NVIIRnL~ir~g~~~d~  171 (383)
                      |.|.+.|+|.....            +...  .|++|.|.|   +|.|.|      |++.+++||.|++|+++....   
T Consensus       107 v~l~l~G~l~~~~d~~~w~~~~~~~wi~f~~v~nv~I~G~G---~IDG~G~~ww~~l~~~~~~nv~v~gitl~nsp~---  180 (409)
T PLN03010        107 IKVQLDGIIVAPSNIVAWSNPKSQMWISFSTVSGLMIDGSG---TIDGRGSSFWEALHISKCDNLTINGITSIDSPK---  180 (409)
T ss_pred             EEEEEccEEEccCChhhccCCCCcceEEEecccccEEeece---EEeCCCccccceEEEEeecCeEEeeeEEEcCCc---
Confidence            55666787765431            2222  678888853   577755      778899999999999997653   


Q ss_pred             CceEecCCCceEEEEceeee-----cCCCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecC
Q 016742          172 DAIQIKPKSKHIWIDRCSLR-----DYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDG  246 (383)
Q Consensus       172 DaI~i~~~s~nVwIDHcs~s-----~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~  246 (383)
                      =.|.+. .+++|.|++..+.     ...|| ||+ ..+++|+|++|.|..-+-+.-|.....     ..+|+.-.|...|
T Consensus       181 ~~i~i~-~~~nv~i~~i~I~a~~~s~NTDG-iDi-~~s~nV~I~n~~I~~gDDcIaiksgs~-----ni~I~~~~C~~gH  252 (409)
T PLN03010        181 NHISIK-TCNYVAISKINILAPETSPNTDG-IDI-SYSTNINIFDSTIQTGDDCIAINSGSS-----NINITQINCGPGH  252 (409)
T ss_pred             eEEEEe-ccccEEEEEEEEeCCCCCCCCCc-eee-eccceEEEEeeEEecCCCeEEecCCCC-----cEEEEEEEeECcC
Confidence            346676 7899999999985     46899 898 468999999999998888888775421     1344444443221


Q ss_pred             C-----CCcCCc-cccCeeEEEcceEEccccceee-----ecC--CceEEEEceEEecCCcccee
Q 016742          247 T-----RQRHPR-VRYAKVHLYNNYTRNWGIYAVC-----ASV--DSQIYSQCNIYEAGQKKMAF  298 (383)
Q Consensus       247 ~-----~~R~Pr-~r~G~~hv~NN~~~n~~~~a~~-----~~~--~a~i~~e~Nyf~~g~~~~~~  298 (383)
                      -     ..+... -..-.++|.|+.+.+.. +++.     ++.  =..|.+++-.++....+..+
T Consensus       253 GisIGS~g~~~~~~~V~nV~v~n~~i~~t~-~GirIKt~~G~~G~v~nItf~nI~m~~v~~pI~I  316 (409)
T PLN03010        253 GISVGSLGADGANAKVSDVHVTHCTFNQTT-NGARIKTWQGGQGYARNISFENITLINTKNPIII  316 (409)
T ss_pred             CEEEccCCCCCCCCeeEEEEEEeeEEeCCC-cceEEEEecCCCEEEEEeEEEeEEEecCCccEEE
Confidence            1     000000 00114678888777643 2321     111  12456666666665555443

>PLN02480 Probable pectinesterase

Probab=97.81  E-value=0.0022  Score=64.82  Aligned_cols=117  Identities=11%  Similarity=0.232  Sum_probs=76.9

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEe---ccCcceeeeccc-eEEeCC----------cEEEe
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQR-VKLTGK----------GLRLK  151 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~g-i~I~G~----------gl~i~  151 (383)
                      +.+|.|   ||++||++-    ..+++||-..|+.+  ++|.|   ++|+||.|.|.. ..|.+.          .|.|.
T Consensus        53 a~~G~g~f~TIQ~AIdaap~~~~~~~~I~Ik~GvY~--E~V~I~~~kp~ItL~G~g~~~TvI~~~~~~~~~~~saTvtV~  130 (343)
T PLN02480         53 DINGKGDFTSVQSAIDAVPVGNSEWIIVHLRKGVYR--EKVHIPENKPFIFMRGNGKGRTSIVWSQSSSDNAASATFTVE  130 (343)
T ss_pred             CCCCCCCcccHHHHHhhCccCCCceEEEEEcCcEEE--EEEEECCCCceEEEEecCCCCeEEEccccccCCCCceEEEEE
Confidence            334544   799999763    23556666679884  67778   367999998733 334321          25554


Q ss_pred             eeccEEEeeeEEecCCC------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          152 ECEHVIICNLEFEGGKG------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~~------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                       +++++++||+|+...+      ...-|+-+.-.+.++.|.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       131 -a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~QDTLy~~---~gR~yf~~C~Ie  196 (343)
T PLN02480        131 -APHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTHNTLFDY---KGRHYYHSCYIQ  196 (343)
T ss_pred             -CCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEecccceeEeC---CCCEEEEeCEEE
Confidence             8999999999997632      12345555435789999999998887777643   123444555554

>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans

Probab=97.73  E-value=0.0021  Score=62.08  Aligned_cols=118  Identities=15%  Similarity=0.160  Sum_probs=78.3

Q ss_pred             hHHHhhhcCCCeEEEEEeceEEEecc----eeEeccCcceeee----cc----------ceEEeCCc-------EEEeee
Q 016742           99 SLREGCRMKEPLWIVFEVSGTIHLRS----HLSVSSYKTIDGR----GQ----------RVKLTGKG-------LRLKEC  153 (383)
Q Consensus        99 SLr~ai~~~~Pr~IVf~vsG~I~l~~----~l~V~snkTI~G~----G~----------gi~I~G~g-------l~i~~a  153 (383)
                      +|.+|++...|..+|.--.|++.-..    +|.+.+.++|.|.    |.          ++.|.|.+       +.|..+
T Consensus        17 Ti~~A~~~a~~g~~i~l~~GtY~~~~ge~fPi~i~~gVtl~G~~~~kG~~~il~~g~~~~~~I~g~~~~~~~qn~tI~~~   96 (246)
T PF07602_consen   17 TITKALQAAQPGDTIQLAPGTYSEATGETFPIIIKPGVTLIGNESNKGQIDILITGGGTGPTISGGGPDLSGQNVTIILA   96 (246)
T ss_pred             HHHHHHHhCCCCCEEEECCceeccccCCcccEEecCCeEEeecccCCCcceEEecCCceEEeEeccCccccceeEEEEec
Confidence            58899988877776666779987543    5888889999985    33          22334433       444457


Q ss_pred             ccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecC-CCCceEeec-----CCceEEEeCceecCCCc
Q 016742          154 EHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDY-DDGLIDITR-----ESTDITVSRCHFSSHDK  219 (383)
Q Consensus       154 ~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~-~Dglidi~~-----~s~~VTIS~n~f~~H~k  219 (383)
                      ++..|+.++|+......+-||.|+ .+ +.-|..|+|..+ .+| |.+..     ...+++|+.|.+.....
T Consensus        97 ~~~~i~GvtItN~n~~~g~Gi~Ie-ss-~~tI~Nntf~~~~~~G-I~v~g~~~~~~i~~~vI~GN~~~~~~~  165 (246)
T PF07602_consen   97 NNATISGVTITNPNIARGTGIWIE-SS-SPTIANNTFTNNGREG-IFVTGTSANPGINGNVISGNSIYFNKT  165 (246)
T ss_pred             CCCEEEEEEEEcCCCCcceEEEEe-cC-CcEEEeeEEECCcccc-EEEEeeecCCcccceEeecceEEecCc
Confidence            788889999987643346688886 33 778899999985 555 43322     23456677776654333

Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).

>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen

Probab=97.72  E-value=0.0021  Score=65.56  Aligned_cols=183  Identities=17%  Similarity=0.272  Sum_probs=134.5

Q ss_pred             CeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEecceeEeccCcceeeeccceEEeCC---cEEEe---------e
Q 016742           85 PLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGK---GLRLK---------E  152 (383)
Q Consensus        85 ~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~~~l~V~snkTI~G~G~gi~I~G~---gl~i~---------~  152 (383)
                      ++|.+-=.+|     |.+||.+-..  |..+.+-+..+.++|.|.+..+|+|+|+.+.|.+.   +|.+.         +
T Consensus        47 kt~~~~P~eD-----le~~I~~haK--VaL~Pg~~Y~i~~~V~I~~~cYIiGnGA~V~v~~~~~~~f~v~~~~~~P~V~g  119 (386)
T PF01696_consen   47 KTYWMEPGED-----LEEAIRQHAK--VALRPGAVYVIRKPVNIRSCCYIIGNGATVRVNGPDRVAFRVCMQSMGPGVVG  119 (386)
T ss_pred             EEEEcCCCcC-----HHHHHHhcCE--EEeCCCCEEEEeeeEEecceEEEECCCEEEEEeCCCCceEEEEcCCCCCeEee
Confidence            3456666666     9999998762  45677788888899999999999999999888643   25442         3


Q ss_pred             eccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCC
Q 016742          153 CEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVAD  232 (383)
Q Consensus       153 a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d  232 (383)
                      -.+|.+.|++|....  ..-|+-+. ...++.|--|.|....--.|+..   ....|..|.|..-+|++...+       
T Consensus       120 M~~VtF~ni~F~~~~--~~~g~~f~-~~t~~~~hgC~F~gf~g~cl~~~---~~~~VrGC~F~~C~~gi~~~~-------  186 (386)
T PF01696_consen  120 MEGVTFVNIRFEGRD--TFSGVVFH-ANTNTLFHGCSFFGFHGTCLESW---AGGEVRGCTFYGCWKGIVSRG-------  186 (386)
T ss_pred             eeeeEEEEEEEecCC--ccceeEEE-ecceEEEEeeEEecCcceeEEEc---CCcEEeeeEEEEEEEEeecCC-------
Confidence            579999999999754  24567676 67899999999999888888775   468899999988888775322       


Q ss_pred             cceeEEEeceeecCCCCcCCccccCeeEEEcceEEccccceeeecCCceEEEEceEEecCC
Q 016742          233 RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       233 ~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~  293 (383)
                       ..++++.+|.|..+.-=-  +..|...+.+|...+-.= .+-..  ..-.+.+|.|....
T Consensus       187 -~~~lsVk~C~FekC~igi--~s~G~~~i~hn~~~ec~C-f~l~~--g~g~i~~N~v~~~~  241 (386)
T PF01696_consen  187 -KSKLSVKKCVFEKCVIGI--VSEGPARIRHNCASECGC-FVLMK--GTGSIKHNMVCGPN  241 (386)
T ss_pred             -cceEEeeheeeeheEEEE--EecCCeEEecceecccce-EEEEc--ccEEEeccEEeCCC
Confidence             236888999998875432  345888999998887642 22222  23344688887543

E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.

>PLN02793 Probable polygalacturonase

Probab=97.71  E-value=0.0035  Score=65.43  Aligned_cols=137  Identities=15%  Similarity=0.196  Sum_probs=89.4

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |++.+++||.|++|+++....+   .|.+. .+++|.|++.++..     ..|| ||+ ..+++|+|++|.|..-+-+..
T Consensus       180 i~f~~~~nv~v~gitl~nSp~~---~i~~~-~~~nv~i~~l~I~~p~~spNTDG-Idi-~~s~nV~I~n~~I~~gDDcIa  253 (443)
T PLN02793        180 ITFHKCKDLRVENLNVIDSQQM---HIAFT-NCRRVTISGLKVIAPATSPNTDG-IHI-SASRGVVIKDSIVRTGDDCIS  253 (443)
T ss_pred             EEEEeeccEEEECeEEEcCCCe---EEEEE-ccCcEEEEEEEEECCCCCCCCCc-Eee-eccceEEEEeCEEeCCCCeEE
Confidence            6777899999999999976532   46666 78999999999963     6899 898 468999999999998888887


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCCCC-------cCCc-cccCeeEEEcceEEccccceee-----ec--CCceEEEEce
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGTRQ-------RHPR-VRYAKVHLYNNYTRNWGIYAVC-----AS--VDSQIYSQCN  287 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~~~-------R~Pr-~r~G~~hv~NN~~~n~~~~a~~-----~~--~~a~i~~e~N  287 (383)
                      +....       .+|++.++.+.....       +... -..-.+.+.|+.+.+.. +++.     ++  .-..|.+++-
T Consensus       254 ik~~s-------~nI~I~n~~c~~GhGisIGSlg~~~~~~~V~nV~v~n~~~~~t~-~GirIKt~~g~~G~v~nItf~ni  325 (443)
T PLN02793        254 IVGNS-------SRIKIRNIACGPGHGISIGSLGKSNSWSEVRDITVDGAFLSNTD-NGVRIKTWQGGSGNASKITFQNI  325 (443)
T ss_pred             ecCCc-------CCEEEEEeEEeCCccEEEecccCcCCCCcEEEEEEEccEEeCCC-ceEEEEEeCCCCEEEEEEEEEeE
Confidence            76431       267887776633211       1000 00113677777777643 2321     11  1124555665


Q ss_pred             EEecCCcccee
Q 016742          288 IYEAGQKKMAF  298 (383)
Q Consensus       288 yf~~g~~~~~~  298 (383)
                      ..++...+...
T Consensus       326 ~m~nv~~pI~I  336 (443)
T PLN02793        326 FMENVSNPIII  336 (443)
T ss_pred             EEecCCceEEE
Confidence            56555544443

>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A

Probab=97.71  E-value=0.00047  Score=59.09  Aligned_cols=129  Identities=17%  Similarity=0.209  Sum_probs=71.8

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCc-eeEecC
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDK-TMLIGA  225 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k-~~LiG~  225 (383)
                      +|.+...+++.|++-+|+.    ...+|.+. ...++.|+.|.|++...+ +.+. .+..++|++|.|.+... ++.+..
T Consensus        25 gi~~~~~~~~~i~n~~i~~----~~~gi~~~-~~~~~~i~~~~~~~~~~~-i~~~-~~~~~~i~~~~i~~~~~~gi~~~~   97 (158)
T PF13229_consen   25 GIHVSGSSNITIENCTISN----GGYGIYVS-GGSNVTISNNTISDNGSG-IYVS-GSSNITIENNRIENNGDYGIYISN   97 (158)
T ss_dssp             CEEE-SSCESEEES-EEES----STTSEEEE-CCES-EEES-EEES-SEE-EECC-S-CS-EEES-EEECSSS-SCE-TC
T ss_pred             EEEEEcCCCeEEECeEEEC----CCcEEEEe-cCCCeEEECeEEEEccce-EEEE-ecCCceecCcEEEcCCCccEEEec
Confidence            5666666667788888876    35777776 567788888888877733 4553 56788888888876544 444432


Q ss_pred             CCCCCCCcceeEEEeceeecCCCCcCCcccc-C--eeEEEcceEEccccceeeecCCce-EEEEceEE
Q 016742          226 DPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-A--KVHLYNNYTRNWGIYAVCASVDSQ-IYSQCNIY  289 (383)
Q Consensus       226 ~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G--~~hv~NN~~~n~~~~a~~~~~~a~-i~~e~Nyf  289 (383)
                             ....+++.+|.|.++....=.+.. .  .+-+.+|.+++-..+++....... +.+.+|.|
T Consensus        98 -------~~~~~~i~~n~~~~~~~~gi~~~~~~~~~~~i~~n~i~~~~~~gi~~~~~~~~~~v~~n~~  158 (158)
T PF13229_consen   98 -------SSSNVTIENNTIHNNGGSGIYLEGGSSPNVTIENNTISNNGGNGIYLISGSSNCTVTNNTF  158 (158)
T ss_dssp             -------EECS-EEES-EEECCTTSSCEEEECC--S-EEECEEEECESSEEEE-TT-SS--EEES-E-
T ss_pred             -------cCCCEEEEeEEEEeCcceeEEEECCCCCeEEEEEEEEEeCcceeEEEECCCCeEEEECCCC
Confidence                   012577888888777643333322 2  566788888777667775554444 66677765

>PLN03003 Probable polygalacturonase At3g15720

Probab=97.70  E-value=0.0025  Score=66.59  Aligned_cols=109  Identities=17%  Similarity=0.284  Sum_probs=77.3

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |++.+++||.|++|+++....   =.|.+. .+++|.|++.++..     ..|| ||+ ..+++|+|.+|.|..-+-+.-
T Consensus       141 l~f~~~~nv~I~gitl~NSp~---w~i~i~-~c~nV~i~~l~I~ap~~spNTDG-IDi-~~S~nV~I~n~~I~tGDDCIa  214 (456)
T PLN03003        141 LKFRSCNNLRLSGLTHLDSPM---AHIHIS-ECNYVTISSLRINAPESSPNTDG-IDV-GASSNVVIQDCIIATGDDCIA  214 (456)
T ss_pred             EEEEecCCcEEeCeEEecCCc---EEEEEe-ccccEEEEEEEEeCCCCCCCCCc-Eee-cCcceEEEEecEEecCCCeEE
Confidence            677789999999999997643   356676 78999999999864     5899 899 468999999999998888887


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCCCC-------cCCcc-ccCeeEEEcceEEcc
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGTRQ-------RHPRV-RYAKVHLYNNYTRNW  269 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~~~-------R~Pr~-r~G~~hv~NN~~~n~  269 (383)
                      |.+..       .+|++-++.+.....       +.... ..-.+++.|+.+.+.
T Consensus       215 iksgs-------~NI~I~n~~c~~GHGISIGSlg~~g~~~~V~NV~v~n~~~~~T  262 (456)
T PLN03003        215 INSGT-------SNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGT  262 (456)
T ss_pred             eCCCC-------ccEEEEeeEEECCCCeEEeeccCCCCcceEEEEEEEeeEEECC
Confidence            77542       256676665532211       10000 011367888877764

>PLN02197 pectinesterase

Probab=97.64  E-value=0.011  Score=63.57  Aligned_cols=132  Identities=22%  Similarity=0.359  Sum_probs=83.2

Q ss_pred             ccccccCCCcccccCCCCCCCCCCeEEecCCCCCCCc---hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cC
Q 016742           62 CSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPG---SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SY  131 (383)
Q Consensus        62 ~~~~a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~g~G---SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---sn  131 (383)
                      ..++.|.  +.+.|+.+-||.++.+-..-..+.+|.|   |+++||++    ...|+||+-..|+.+  +.+.|.   +|
T Consensus       251 ~~r~ll~--~~~~~~~~~~~~~~~~~~~~vVa~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~--E~V~I~~~k~n  326 (588)
T PLN02197        251 ADRKLMA--KAGRGANAGGGGGGKIKATHVVAKDGSGQFKTISQAVMACPDKNPGRCIIHIKAGIYN--EQVTIPKKKNN  326 (588)
T ss_pred             cchhhhc--cCcccccccccccccccccEEEcCCCCCCcCCHHHHHHhccccCCceEEEEEeCceEE--EEEEccCCCce
Confidence            3455554  3444556666665654322224556766   68899965    224666666779984  567774   68


Q ss_pred             cceeeeccceEEe-C-------Cc--------EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCC
Q 016742          132 KTIDGRGQRVKLT-G-------KG--------LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYD  194 (383)
Q Consensus       132 kTI~G~G~gi~I~-G-------~g--------l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~  194 (383)
                      +||.|.|.+-+|. +       .|        |.+ .+++++.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..
T Consensus       327 i~l~G~g~~~TiIt~~~~~~~~~g~~T~~SaT~~v-~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQ  405 (588)
T PLN02197        327 IFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQV-ESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQ  405 (588)
T ss_pred             EEEEEcCCCCeEEEeccccccCCCCcccceeEEEE-ECCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecC
Confidence            9999997644443 1       11        333 489999999999986432 2234444335788999999998766


Q ss_pred             CCce
Q 016742          195 DGLI  198 (383)
Q Consensus       195 Dgli  198 (383)
                      |=|+
T Consensus       406 DTLy  409 (588)
T PLN02197        406 DTLY  409 (588)
T ss_pred             cceE
Confidence            6554

>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O

Probab=97.61  E-value=0.0024  Score=60.11  Aligned_cols=105  Identities=17%  Similarity=0.157  Sum_probs=51.4

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCC
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD  226 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~  226 (383)
                      ||.+..+++++|++-.|+...    .||.+. .+.+..|..|.|+....| |.+. ++.+.+|+.|.|.+...++.+-.+
T Consensus        59 GI~~~~s~~~~i~~n~i~~n~----~Gi~l~-~s~~~~I~~N~i~~n~~G-I~l~-~s~~~~I~~N~i~~~~~GI~l~~s  131 (236)
T PF05048_consen   59 GIHLMGSSNNTIENNTISNNG----YGIYLM-GSSNNTISNNTISNNGYG-IYLY-GSSNNTISNNTISNNGYGIYLSSS  131 (236)
T ss_pred             EEEEEccCCCEEEeEEEEccC----CCEEEE-cCCCcEEECCEecCCCce-EEEe-eCCceEEECcEEeCCCEEEEEEeC
Confidence            345555555555555555431    555554 344446666666655554 3332 345556666666555555544332


Q ss_pred             CCCCCCcceeEEEeceeecCCCCcCCc-cc-cCeeEEEcceE
Q 016742          227 PSHVADRCIRVTIHHCFFDGTRQRHPR-VR-YAKVHLYNNYT  266 (383)
Q Consensus       227 d~~~~d~~~~VT~hhN~f~~~~~R~Pr-~r-~G~~hv~NN~~  266 (383)
                      .        +.++.+|.|.++..---. +. .....+++|.|
T Consensus       132 ~--------~n~I~~N~i~~n~~~Gi~~~~~s~~n~I~~N~f  165 (236)
T PF05048_consen  132 S--------NNTITGNTISNNTDYGIYFLSGSSGNTIYNNNF  165 (236)
T ss_pred             C--------CCEEECeEEeCCCccceEEeccCCCCEEECCCc
Confidence            1        345556666555322222 11 12345555555

To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].

>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O

Probab=97.57  E-value=0.0015  Score=61.50  Aligned_cols=131  Identities=15%  Similarity=0.121  Sum_probs=96.6

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEec
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIG  224 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG  224 (383)
                      ..++.+..++++.|++.+|+..    ..||.+. .+.++-|..|.++....| |.+.. +.+.+|++|.|.+...++++.
T Consensus        35 ~~gi~~~~s~~~~I~~n~i~~~----~~GI~~~-~s~~~~i~~n~i~~n~~G-i~l~~-s~~~~I~~N~i~~n~~GI~l~  107 (236)
T PF05048_consen   35 RDGIYVENSDNNTISNNTISNN----RYGIHLM-GSSNNTIENNTISNNGYG-IYLMG-SSNNTISNNTISNNGYGIYLY  107 (236)
T ss_pred             CCEEEEEEcCCeEEEeeEEECC----CeEEEEE-ccCCCEEEeEEEEccCCC-EEEEc-CCCcEEECCEecCCCceEEEe
Confidence            3456677799999999999975    5789887 688899999999999988 55644 455599999999877777665


Q ss_pred             CCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEccccceee-ecCCceEEEEceEEec
Q 016742          225 ADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNWGIYAVC-ASVDSQIYSQCNIYEA  291 (383)
Q Consensus       225 ~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~~~~a~~-~~~~a~i~~e~Nyf~~  291 (383)
                      .+.        ..++.+|.|. ....-=.+.. ....+.+|.+.+-..+++. ........+.+|+|.+
T Consensus       108 ~s~--------~~~I~~N~i~-~~~~GI~l~~s~~n~I~~N~i~~n~~~Gi~~~~~s~~n~I~~N~f~N  167 (236)
T PF05048_consen  108 GSS--------NNTISNNTIS-NNGYGIYLSSSSNNTITGNTISNNTDYGIYFLSGSSGNTIYNNNFNN  167 (236)
T ss_pred             eCC--------ceEEECcEEe-CCCEEEEEEeCCCCEEECeEEeCCCccceEEeccCCCCEEECCCccC
Confidence            443        3688888887 3333333332 4678999998887567777 4445556778999943

To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].

>PLN02188 polygalacturonase/glycoside hydrolase family protein

Probab=97.34  E-value=0.0084  Score=61.93  Aligned_cols=137  Identities=12%  Similarity=0.130  Sum_probs=91.5

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |.+..++||.|++|+|+....   =.|.+. .+++|.|++.++..     ..|| ||+ ..+++|+|.+|.|..-+-+.-
T Consensus       158 i~f~~~~nv~i~gitl~nSp~---w~i~~~-~~~~v~i~~v~I~~~~~spNtDG-idi-~~s~nV~I~n~~I~~GDDcIa  231 (404)
T PLN02188        158 VKFVNMNNTVVRGITSVNSKF---FHIALV-ECRNFKGSGLKISAPSDSPNTDG-IHI-ERSSGVYISDSRIGTGDDCIS  231 (404)
T ss_pred             EEEEeeeeEEEeCeEEEcCCC---eEEEEE-ccccEEEEEEEEeCCCCCCCCCc-Eee-eCcccEEEEeeEEeCCCcEEE
Confidence            466789999999999998653   356676 78999999999864     6799 898 468999999999998888888


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCCCC-------cCCc-cccCeeEEEcceEEccccceeee---------cCCceEEEE
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGTRQ-------RHPR-VRYAKVHLYNNYTRNWGIYAVCA---------SVDSQIYSQ  285 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~~~-------R~Pr-~r~G~~hv~NN~~~n~~~~a~~~---------~~~a~i~~e  285 (383)
                      +....       .+|++-++.+.....       +..- -....+.+.|+.+.+.. +++..         +.-..|.++
T Consensus       232 iksg~-------~nI~I~n~~c~~ghGisiGSlG~~~~~~~V~nV~v~n~~~~~t~-~GiriKt~~g~~~~G~v~nI~f~  303 (404)
T PLN02188        232 IGQGN-------SQVTITRIRCGPGHGISVGSLGRYPNEGDVTGLVVRDCTFTGTT-NGIRIKTWANSPGKSAATNMTFE  303 (404)
T ss_pred             EccCC-------ccEEEEEEEEcCCCcEEeCCCCCCCcCCcEEEEEEEeeEEECCC-cEEEEEEecCCCCceEEEEEEEE
Confidence            86432       157776666543211       0000 00124678888887753 33322         111356677


Q ss_pred             ceEEecCCcccee
Q 016742          286 CNIYEAGQKKMAF  298 (383)
Q Consensus       286 ~Nyf~~g~~~~~~  298 (383)
                      +-.++....+..+
T Consensus       304 ni~m~~v~~pI~i  316 (404)
T PLN02188        304 NIVMNNVTNPIII  316 (404)
T ss_pred             eEEecCccceEEE
Confidence            7777776655544

>PLN02155 polygalacturonase

Probab=97.32  E-value=0.0072  Score=62.19  Aligned_cols=137  Identities=12%  Similarity=0.152  Sum_probs=89.9

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeee-----cCCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLR-----DYDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s-----~~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |++.+++||.|++|+++....   =.|.+. .+++|.|++.++.     ...|| ||+ ..+++|+|++|.|..-+-+..
T Consensus       148 i~~~~~~nv~i~gitl~nSp~---w~i~~~-~~~nv~i~~v~I~~p~~~~NtDG-idi-~~s~nV~I~~~~I~~gDDcIa  221 (394)
T PLN02155        148 ISFNSAKDVIISGVKSMNSQV---SHMTLN-GCTNVVVRNVKLVAPGNSPNTDG-FHV-QFSTGVTFTGSTVQTGDDCVA  221 (394)
T ss_pred             eeEEEeeeEEEECeEEEcCCC---eEEEEE-CeeeEEEEEEEEECCCCCCCCCc-ccc-ccceeEEEEeeEEecCCceEE
Confidence            677789999999999997643   346665 7899999999995     35798 788 468999999999998887887


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCCC-------CcCCc-cccCeeEEEcceEEccccceeee----c-CC---ceEEEEc
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGTR-------QRHPR-VRYAKVHLYNNYTRNWGIYAVCA----S-VD---SQIYSQC  286 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~~-------~R~Pr-~r~G~~hv~NN~~~n~~~~a~~~----~-~~---a~i~~e~  286 (383)
                      |+...       .+|++.++.+....       .+.+. -..-.+.+.|+.+.+.. +++..    + .+   ..|.+++
T Consensus       222 ik~gs-------~nI~I~n~~c~~GhGisIGS~g~~~~~~~V~nV~v~n~~~~~t~-~GirIKT~~~~~gG~v~nI~f~n  293 (394)
T PLN02155        222 IGPGT-------RNFLITKLACGPGHGVSIGSLAKELNEDGVENVTVSSSVFTGSQ-NGVRIKSWARPSTGFVRNVFFQD  293 (394)
T ss_pred             cCCCC-------ceEEEEEEEEECCceEEeccccccCCCCcEEEEEEEeeEEeCCC-cEEEEEEecCCCCEEEEEEEEEe
Confidence            76542       26777776654311       12221 11124678888887643 34322    1 11   2445555


Q ss_pred             eEEecCCcccee
Q 016742          287 NIYEAGQKKMAF  298 (383)
Q Consensus       287 Nyf~~g~~~~~~  298 (383)
                      -.++....+..+
T Consensus       294 i~m~~v~~pI~i  305 (394)
T PLN02155        294 LVMKNVENPIII  305 (394)
T ss_pred             EEEcCccccEEE
Confidence            555555544443

>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3

Probab=97.31  E-value=0.0022  Score=64.12  Aligned_cols=89  Identities=21%  Similarity=0.453  Sum_probs=68.8

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |++.+++|+.|++|+++....+   .+.+. .+++|+|++.++..     ..|| ||+. .+++|+|.+|.|...+-+.-
T Consensus        95 i~~~~~~~~~i~~i~~~nsp~w---~~~~~-~~~nv~i~~i~I~~~~~~~NtDG-id~~-~s~nv~I~n~~i~~gDD~Ia  168 (326)
T PF00295_consen   95 IRFNNCKNVTIEGITIRNSPFW---HIHIN-DCDNVTISNITINNPANSPNTDG-IDID-SSKNVTIENCFIDNGDDCIA  168 (326)
T ss_dssp             EEEEEEEEEEEESEEEES-SSE---SEEEE-SEEEEEEESEEEEEGGGCTS--S-EEEE-SEEEEEEESEEEESSSESEE
T ss_pred             eeeeeecceEEEeeEecCCCee---EEEEE-ccCCeEEcceEEEecCCCCCcce-EEEE-eeeEEEEEEeecccccCccc
Confidence            7888899999999999986543   57776 79999999999963     4799 7984 68999999999998877776


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCCCC
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGTRQ  249 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~~~  249 (383)
                      +.+..       .+|++.+++|.+...
T Consensus       169 iks~~-------~ni~v~n~~~~~ghG  188 (326)
T PF00295_consen  169 IKSGS-------GNILVENCTCSGGHG  188 (326)
T ss_dssp             ESSEE-------CEEEEESEEEESSSE
T ss_pred             ccccc-------cceEEEeEEEecccc
Confidence            66532       178898998865433

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....

>PLN02176 putative pectinesterase

Probab=97.24  E-value=0.0045  Score=62.46  Aligned_cols=117  Identities=15%  Similarity=0.270  Sum_probs=76.9

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe--CC--------cEEEee
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT--GK--------GLRLKE  152 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~--G~--------gl~i~~  152 (383)
                      +.+|.|   |+++||++-    ..+++|+-..|+.+  +.|.|.   +|+||.|.|..-+|.  +.        .+.+ .
T Consensus        44 a~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~GvY~--EkV~Ip~~k~~vtl~G~g~~~TiIt~~~~~~t~~saT~~v-~  120 (340)
T PLN02176         44 NPNDARYFKTVQSAIDSIPLQNQNWIRILIQNGIYR--EKVTIPKEKGYIYMQGKGIEKTIIAYGDHQATDTSATFTS-Y  120 (340)
T ss_pred             CCCCCCCccCHHHHHhhchhcCCceEEEEECCcEEE--EEEEECCCCccEEEEEcCCCceEEEEeCCcccccceEEEE-E
Confidence            445665   788999652    23555665679984  667773   689999997654443  11        2455 4


Q ss_pred             eccEEEeeeEEecCCC-------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          153 CEHVIICNLEFEGGKG-------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       153 a~NVIIRnL~ir~g~~-------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      +++++.+||+|+....       ...-|+-+.-.+.++.+.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       121 a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C~f~G~QDTLy~~---~gRqyf~~CyIe  187 (340)
T PLN02176        121 ASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDSSFDGFQDTLFDG---KGRHYYKRCVIS  187 (340)
T ss_pred             CCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEccEEecccceeEeC---CcCEEEEecEEE
Confidence            8999999999997532       11233433334788999999999888877653   234455666665

>PLN02432 putative pectinesterase

Probab=97.18  E-value=0.022  Score=56.43  Aligned_cols=111  Identities=15%  Similarity=0.270  Sum_probs=73.3

Q ss_pred             hHHHhhhcC----CCeEEEEEeceEEEecceeEe---ccCcceeeeccceEEe----C------CcEEEeeeccEEEeee
Q 016742           99 SLREGCRMK----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQRVKLT----G------KGLRLKECEHVIICNL  161 (383)
Q Consensus        99 SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~gi~I~----G------~gl~i~~a~NVIIRnL  161 (383)
                      |+++||++-    ..+++||-..|+.  .+.|.|   .+|+||.|.+..-++.    +      ..+.+ .++|++++||
T Consensus        25 TIq~Aida~p~~~~~~~~I~I~~G~Y--~E~V~ip~~k~~itl~G~~~~~TvI~~~~~~~~~~saT~~v-~a~~f~a~nl  101 (293)
T PLN02432         25 KIQDAIDAVPSNNSQLVFIWVKPGIY--REKVVVPADKPFITLSGTQASNTIITWNDGGDIFESPTLSV-LASDFVGRFL  101 (293)
T ss_pred             CHHHHHhhccccCCceEEEEEeCcee--EEEEEEeccCceEEEEEcCCCCeEEEecCCcccccceEEEE-ECCCeEEEee
Confidence            678888652    2245555567887  466777   3799999997544443    1      11444 4899999999


Q ss_pred             EEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          162 EFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       162 ~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      +|+...+...-|+-+.-.+.++.+.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       102 t~~Nt~g~~~QAvAl~v~gDr~~f~~c~~~G~QDTLy~~---~gr~yf~~c~I~  152 (293)
T PLN02432        102 TIQNTFGSSGKAVALRVAGDRAAFYGCRILSYQDTLLDD---TGRHYYRNCYIE  152 (293)
T ss_pred             EEEeCCCCCCceEEEEEcCCcEEEEcceEecccceeEEC---CCCEEEEeCEEE
Confidence            999764433344444334788999999999888877642   234455666665

>PLN02416 probable pectinesterase/pectinesterase inhibitor

Probab=97.17  E-value=0.026  Score=60.42  Aligned_cols=118  Identities=22%  Similarity=0.485  Sum_probs=77.4

Q ss_pred             CCCCCc---hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-eCC-----c--------E
Q 016742           93 ADDGPG---SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-TGK-----G--------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~G~-----g--------l  148 (383)
                      +.+|.|   ++++||++    ...|+||+-..|+.+  +.+.|.   +|+||+|.|.+-+| .+.     +        |
T Consensus       235 a~dGsG~f~TIq~Ai~a~p~~~~~r~vI~Ik~GvY~--E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~saT~  312 (541)
T PLN02416        235 AADGTGNFSTITDAINFAPNNSNDRIIIYVREGVYE--ENVEIPIYKTNIVLIGDGSDVTFITGNRSVVDGWTTFRSATL  312 (541)
T ss_pred             CCCCCCCccCHHHHHHhhhhcCCceEEEEEeCceeE--EEEecCCCCccEEEEecCCCceEEeCCCccCCCCCccceEEE
Confidence            445666   67888865    335677776789884  567773   78999999865444 331     1        4


Q ss_pred             EEeeeccEEEeeeEEecCCCC---CCCceEecCCCceEEEEceeeecCCCCc-----------------eEeecCCceEE
Q 016742          149 RLKECEHVIICNLEFEGGKGP---DVDAIQIKPKSKHIWIDRCSLRDYDDGL-----------------IDITRESTDIT  208 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~---d~DaI~i~~~s~nVwIDHcs~s~~~Dgl-----------------idi~~~s~~VT  208 (383)
                      .+. +++++.|||+|+...+.   ..-|+.+  .+.++.+-+|.|.-..|=|                 +|+.-+.-.+-
T Consensus       313 ~v~-~~~F~a~nitf~Ntag~~~~QAVAl~v--~~D~~~fy~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~av  389 (541)
T PLN02416        313 AVS-GEGFLARDITIENTAGPEKHQAVALRV--NADLVALYRCTINGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAVV  389 (541)
T ss_pred             EEE-CCCeEEEeeEEEECCCCCCCceEEEEE--cCccEEEEcceEecccchhccCCCceEEEeeEEeeccceeeccceEE
Confidence            444 89999999999976432   2345555  4788999999997655444                 44434444555


Q ss_pred             EeCceec
Q 016742          209 VSRCHFS  215 (383)
Q Consensus       209 IS~n~f~  215 (383)
                      +++|.|.
T Consensus       390 fq~c~i~  396 (541)
T PLN02416        390 FQACNIV  396 (541)
T ss_pred             EeccEEE
Confidence            6666664

>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein

Probab=97.16  E-value=0.0051  Score=63.87  Aligned_cols=68  Identities=24%  Similarity=0.262  Sum_probs=43.4

Q ss_pred             ceeeeccceEEeCCcEEEeeeccEEEeeeEEecCCC-------------------CCCCceEecCCCceEEEEceeeecC
Q 016742          133 TIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKG-------------------PDVDAIQIKPKSKHIWIDRCSLRDY  193 (383)
Q Consensus       133 TI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~~-------------------~d~DaI~i~~~s~nVwIDHcs~s~~  193 (383)
                      ||.|.|....-...+|.++.|+++.|++.+|++...                   ....+|.+. .++++.|.+++++..
T Consensus       123 tIdGsG~dl~~rdAgI~v~~a~~v~Iedn~L~gsg~FGI~L~~~~~~I~~N~I~g~~~~~I~lw-~S~g~~V~~N~I~g~  201 (455)
T TIGR03808       123 TLDGGGIPLPQRRGLIHCQGGRDVRITDCEITGSGGNGIWLETVSGDISGNTITQIAVTAIVSF-DALGLIVARNTIIGA  201 (455)
T ss_pred             EEEeCCCcccCCCCEEEEccCCceEEEeeEEEcCCcceEEEEcCcceEecceEeccccceEEEe-ccCCCEEECCEEEcc
Confidence            444444333333446788889999999999987520                   012345554 566888888888887


Q ss_pred             CCCceEee
Q 016742          194 DDGLIDIT  201 (383)
Q Consensus       194 ~Dglidi~  201 (383)
                      .|+.|.+.
T Consensus       202 RD~gi~i~  209 (455)
T TIGR03808       202 NDNGIEIL  209 (455)
T ss_pred             CCCCeEEE
Confidence            77555443

Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.

>PLN02170 probable pectinesterase/pectinesterase inhibitor

Probab=97.10  E-value=0.038  Score=58.82  Aligned_cols=103  Identities=24%  Similarity=0.440  Sum_probs=68.2

Q ss_pred             CCCCCc---hHHHhhhcC-----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-C-----Cc--------
Q 016742           93 ADDGPG---SLREGCRMK-----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-G-----KG--------  147 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~-----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G-----~g--------  147 (383)
                      +.+|.|   ++++||++.     ..|++|+-..|+.+  +.|.|.   +|+||+|.|.+-+|. +     .+        
T Consensus       230 a~dGsG~f~TIq~AI~a~~~~~~~~r~vI~Ik~GvY~--E~V~I~~~k~nItl~G~g~~~TiIt~~~~~~~g~~T~~SaT  307 (529)
T PLN02170        230 AADGSGTHKTIGEALLSTSLESGGGRTVIYLKAGTYH--ENLNIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYQTAT  307 (529)
T ss_pred             cCCCCCchhhHHHHHHhcccccCCceEEEEEeCCeeE--EEEecCCCCceEEEEEcCCCCeEEEeCCcCCCCCccccceE
Confidence            445655   678899631     23666776789984  667773   799999998654442 2     11        


Q ss_pred             EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCce
Q 016742          148 LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                      +.+ .+++++.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..|=|+
T Consensus       308 v~v-~~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~GyQDTLy  358 (529)
T PLN02170        308 VAA-MGDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGYQDSLY  358 (529)
T ss_pred             EEE-EcCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEeccCCcce
Confidence            333 489999999999976432 12344333347889999999976655544

>PLN02217 probable pectinesterase/pectinesterase inhibitor

Probab=97.04  E-value=0.037  Score=60.48  Aligned_cols=197  Identities=19%  Similarity=0.358  Sum_probs=112.2

Q ss_pred             CCCCCc---hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-----c--------E
Q 016742           93 ADDGPG---SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-----G--------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-----g--------l  148 (383)
                      +.+|.|   ++++||++    ...|+||+-..|++  .+.|.|.   .|+||+|.|.+-+|. +.     |        |
T Consensus       255 a~dGsG~f~TIq~Av~a~P~~~~~r~vI~Ik~GvY--~E~V~I~~~k~~i~l~Gdg~~~TiIt~~~~~~dg~~T~~SAT~  332 (670)
T PLN02217        255 AQDGSGQYKTINEALNFVPKKKNTTFVVHIKAGIY--KEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATV  332 (670)
T ss_pred             CCCCCCCccCHHHHHHhccccCCceEEEEEeCCce--EEEEEEcCCCCcEEEEecCCCCeEEEcCCccCCCCCccceEEE
Confidence            445666   68889865    22366666667987  4567774   578999998655443 21     1        3


Q ss_pred             EEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCC-----------------CCceEeecCCceEEEe
Q 016742          149 RLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVS  210 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~-----------------Dglidi~~~s~~VTIS  210 (383)
                      .+ .+++++.|||+|+...+. ..-|+-++-.+....+.+|.|.-..                 .|.+|+.-+....-++
T Consensus       333 ~v-~g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~avfq  411 (670)
T PLN02217        333 AI-VGDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQ  411 (670)
T ss_pred             EE-ECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeeccchhccCCCcEEEEeCEEEEeccEEecCceEEEE
Confidence            34 489999999999976432 2244444435788999999996543                 4455555555667788


Q ss_pred             CceecCCC-----ceeEecCCCCCCCCcceeEEEeceeecCCCCcC------------CccccCeeEEEcceEEc-----
Q 016742          211 RCHFSSHD-----KTMLIGADPSHVADRCIRVTIHHCFFDGTRQRH------------PRVRYAKVHLYNNYTRN-----  268 (383)
Q Consensus       211 ~n~f~~H~-----k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~------------Pr~r~G~~hv~NN~~~n-----  268 (383)
                      +|.|....     ++.+--.+.. ..+...-+.||+|.+.....-.            |.-.+..+-+.|.++.+     
T Consensus       412 ~C~I~~r~~~~~~~~~ITAqgr~-~~~~~tGfvf~~C~i~~~~~~~~~~~~~~~yLGRPW~~ysrvVf~~t~l~~~I~P~  490 (670)
T PLN02217        412 NCTLLVRKPLLNQACPITAHGRK-DPRESTGFVLQGCTIVGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVPPE  490 (670)
T ss_pred             ccEEEEccCCCCCceeEecCCCC-CCCCCceEEEEeeEEecCccccccccccceeeccCCCCCceEEEEecccCCeEcCc
Confidence            88885321     1222111100 0111235789999886643211            11113456677766543     


Q ss_pred             -cccceeeecCCceEEEEceEEecCC
Q 016742          269 -WGIYAVCASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       269 -~~~~a~~~~~~a~i~~e~Nyf~~g~  293 (383)
                       |..+.-......-.+.|.+-+.+|.
T Consensus       491 GW~~W~~~~~~~t~~yaEY~n~GpGa  516 (670)
T PLN02217        491 GWQPWLGDFGLNTLFYSEVQNTGPGA  516 (670)
T ss_pred             ccCccCCCCCCCceEEEEeccccCCC
Confidence             3221111122333456766666664

>PLN02773 pectinesterase

Probab=96.93  E-value=0.068  Score=53.60  Aligned_cols=111  Identities=16%  Similarity=0.227  Sum_probs=69.2

Q ss_pred             hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-e-----------------CC------c
Q 016742           99 SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-T-----------------GK------G  147 (383)
Q Consensus        99 SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~-----------------G~------g  147 (383)
                      |+++||++-    ..+++||-..|+.+  +.|.|.   +++||.|++..-+| .                 |.      .
T Consensus        19 TIq~Aida~P~~~~~~~~I~Ik~G~Y~--E~V~I~~~k~~itl~G~~~~~TiI~~~~~a~~~~~~~~~~~~g~gT~~SaT   96 (317)
T PLN02773         19 TVQDAIDAVPLCNRCRTVIRVAPGVYR--QPVYVPKTKNLITLAGLSPEATVLTWNNTATKIDHHQASRVIGTGTFGCGT   96 (317)
T ss_pred             CHHHHHhhchhcCCceEEEEEeCceEE--EEEEECcCCccEEEEeCCCCceEEEccCccccccccccccccCcCccCceE
Confidence            688888652    23555665679874  667773   57999998753333 2                 10      1


Q ss_pred             EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          148 LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      +.+ .++|++.+||+|+..... ..-|+-+.-.+..+.+.+|.|.-..|=|++-.   ..--+.+|.|.
T Consensus        97 v~v-~a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~QDTL~~~~---gr~yf~~c~Ie  161 (317)
T PLN02773         97 VIV-EGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHY---GKQYLRDCYIE  161 (317)
T ss_pred             EEE-ECCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeecccceeEeCC---CCEEEEeeEEe
Confidence            334 489999999999976421 22333333347889999999987776665421   23344455554

>PLN02682 pectinesterase family protein

Probab=96.90  E-value=0.078  Score=54.21  Aligned_cols=111  Identities=14%  Similarity=0.239  Sum_probs=71.0

Q ss_pred             hHHHhhhcC----CCeEEEEEeceEEEecceeEe---ccCcceeeeccceEEe------------CC--------cEEEe
Q 016742           99 SLREGCRMK----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQRVKLT------------GK--------GLRLK  151 (383)
Q Consensus        99 SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~gi~I~------------G~--------gl~i~  151 (383)
                      |+++||++-    ..+++|+-..|+.+  +.|.|   .+++||.|.|..-++.            |.        .+.+ 
T Consensus        84 TIQ~AIdavP~~~~~r~vI~Ik~G~Y~--EkV~Ip~~k~~Itl~G~g~~~TiIt~~~~a~~~~~~g~~~gT~~SAT~~v-  160 (369)
T PLN02682         84 TIQAAIDSLPVINLVRVVIKVNAGTYR--EKVNIPPLKAYITLEGAGADKTIIQWGDTADTPGPGGRPLGTYGSATFAV-  160 (369)
T ss_pred             CHHHHHhhccccCCceEEEEEeCceee--EEEEEeccCceEEEEecCCCccEEEeccccCccCCCCCccccccceEEEE-
Confidence            688888652    23455555679884  66777   4789999997543332            10        1344 


Q ss_pred             eeccEEEeeeEEecCCC------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          152 ECEHVIICNLEFEGGKG------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~~------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      .+++++.+||+|+....      ...-|+-+.-.+.++.+.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       161 ~a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~f~G~QDTLy~~---~gRqyf~~C~Ie  227 (369)
T PLN02682        161 NSPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCKFLGAQDTLYDH---LGRHYFKDCYIE  227 (369)
T ss_pred             ECCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcceEeccccceEEC---CCCEEEEeeEEc
Confidence            48999999999997532      11123333324788999999998877776653   223445566554

>PLN02933 Probable pectinesterase/pectinesterase inhibitor

Probab=96.89  E-value=0.084  Score=56.35  Aligned_cols=104  Identities=22%  Similarity=0.403  Sum_probs=68.2

Q ss_pred             CCCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe--------CC------c
Q 016742           92 LADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT--------GK------G  147 (383)
Q Consensus        92 l~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~--------G~------g  147 (383)
                      .+.+|.|   |+++||++-    ..|+||+-..|+.+  +.|.|.   +|+||.|.|.+-+|.        |.      .
T Consensus       222 Va~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~--E~V~I~~~k~~itl~G~g~~~TiIt~~~~~~dg~~T~~SaT  299 (530)
T PLN02933        222 VAIDGTGNFTTINEAVSAAPNSSETRFIIYIKGGEYF--ENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTAT  299 (530)
T ss_pred             ECCCCCCCccCHHHHHHhchhcCCCcEEEEEcCceEE--EEEEecCCCceEEEEEcCCCCcEEEeCCccCCCCccccceE
Confidence            3445665   688898652    23566666679985  667773   688999997544332        11      1


Q ss_pred             EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCce
Q 016742          148 LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                      +.+ .+++++.|||+|+...+. ..-|+-++-.+..+-+.+|.|.-..|=|+
T Consensus       300 ~~v-~a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~QDTLy  350 (530)
T PLN02933        300 VGV-KGKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGYQDTLY  350 (530)
T ss_pred             EEE-ECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEecccccc
Confidence            344 389999999999976432 22344443347889999999976655544

>PLN02301 pectinesterase/pectinesterase inhibitor

Probab=96.88  E-value=0.066  Score=57.39  Aligned_cols=120  Identities=18%  Similarity=0.434  Sum_probs=78.1

Q ss_pred             CCCCCc---hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-------c------E
Q 016742           93 ADDGPG---SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-------G------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-------g------l  148 (383)
                      +.+|.|   |+++||++    ...|.|||-..|+.+  +.|.|.   +|+||+|.|.+-+|. +.       +      +
T Consensus       241 a~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~--E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~dg~~T~~SaT~  318 (548)
T PLN02301        241 AKDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGTYK--ENVEIGKKKKNLMLVGDGMDSTIITGSLNVIDGSTTFRSATV  318 (548)
T ss_pred             CCCCCCCcccHHHHHHhhhhcCCceEEEEEeCceee--EEEEecCCCceEEEEecCCCCcEEEeCCccCCCCCceeeEEE
Confidence            345666   68888865    224667776789984  667774   689999998654442 21       1      2


Q ss_pred             EEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCC-----------------ceEeecCCceEEEe
Q 016742          149 RLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDG-----------------LIDITRESTDITVS  210 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dg-----------------lidi~~~s~~VTIS  210 (383)
                      .+ .+++++.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..|-                 .+|+.-+....-++
T Consensus       319 ~v-~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~avfq  397 (548)
T PLN02301        319 AA-VGDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAYQDTLYAHSLRQFYRDSYITGTVDFIFGNAAVVFQ  397 (548)
T ss_pred             EE-ECCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeeccccceecCCcEEEEeeEEEeccceecccceeEEe
Confidence            33 489999999999976432 123443433478899999999765444                 44444445556667


Q ss_pred             Cceec
Q 016742          211 RCHFS  215 (383)
Q Consensus       211 ~n~f~  215 (383)
                      +|.|.
T Consensus       398 ~c~i~  402 (548)
T PLN02301        398 NCKIV  402 (548)
T ss_pred             ccEEE
Confidence            77664

>PLN02990 Probable pectinesterase/pectinesterase inhibitor

Probab=96.81  E-value=0.1  Score=56.29  Aligned_cols=120  Identities=21%  Similarity=0.448  Sum_probs=77.3

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-eC------C--c------
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-TG------K--G------  147 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~G------~--g------  147 (383)
                      +.+|.|   |+++||++-    ..|+||+-..|+.+  +.+.|.   +|+||.|.|.+-+| .+      +  +      
T Consensus       264 a~dGsG~f~TIq~Av~a~p~~~~~r~vI~Ik~GvY~--E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~~T~~saT  341 (572)
T PLN02990        264 AQDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYN--EKVDVTKKMTHVTFIGDGPTKTKITGSLNFYIGKVKTYLTAT  341 (572)
T ss_pred             CCCCCCCCcCHHHHHhhCcccCCceEEEEEeCceeE--EEEEecCCCCcEEEEecCCCceEEEeccccCCCCccceeeeE
Confidence            445665   688899652    23566666679884  567774   68999999754433 21      1  1      


Q ss_pred             EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCC-----------------CceEeecCCceEEE
Q 016742          148 LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDD-----------------GLIDITRESTDITV  209 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~D-----------------glidi~~~s~~VTI  209 (383)
                      +.+ .+++++.|||+|+...+. ..-|+-++-.+....+.+|.|.-..|                 |.+|+.-+....-+
T Consensus       342 ~~v-~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~avf  420 (572)
T PLN02990        342 VAI-NGDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDAKVVL  420 (572)
T ss_pred             EEE-EcCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEecccchhccCCCcEEEEeeEEecccceEccCceEEE
Confidence            233 489999999999976432 23344443347889999999975544                 44444444455666


Q ss_pred             eCceec
Q 016742          210 SRCHFS  215 (383)
Q Consensus       210 S~n~f~  215 (383)
                      ++|.|.
T Consensus       421 ~~C~i~  426 (572)
T PLN02990        421 QNCNIV  426 (572)
T ss_pred             EccEEE
Confidence            777774

>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]

Probab=96.78  E-value=0.021  Score=60.91  Aligned_cols=102  Identities=22%  Similarity=0.468  Sum_probs=71.7

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeec-----------CCceEEEeCceec
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR-----------ESTDITVSRCHFS  215 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~-----------~s~~VTIS~n~f~  215 (383)
                      ++.+..++|+.++||+|..-.....|||.++ .++||.|+-|.|+-+.|- |-++-           .+.+|+|++|+|.
T Consensus       263 ~~h~~~~~nl~~~nl~I~~~~~~NtDG~d~~-sc~NvlI~~~~fdtgDD~-I~iksg~~~~~~~~~~~~~~i~i~~c~~~  340 (542)
T COG5434         263 TVHPVDCDNLTFRNLTIDANRFDNTDGFDPG-SCSNVLIEGCRFDTGDDC-IAIKSGAGLDGKKGYGPSRNIVIRNCYFS  340 (542)
T ss_pred             EEeeecccCceecceEEECCCCCCCCccccc-cceeEEEeccEEecCCce-EEeecccCCcccccccccccEEEecceec
Confidence            3555679999999999986544467999997 899999999999985443 44532           2467999999998


Q ss_pred             CCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCcc
Q 016742          216 SHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRV  254 (383)
Q Consensus       216 ~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~  254 (383)
                      .-.-+..+|+.-   ..+-.+|++-.|.|.+ ..|-=|+
T Consensus       341 ~ghG~~v~Gse~---~ggv~ni~ved~~~~~-~d~GLRi  375 (542)
T COG5434         341 SGHGGLVLGSEM---GGGVQNITVEDCVMDN-TDRGLRI  375 (542)
T ss_pred             ccccceEeeeec---CCceeEEEEEeeeecc-Ccceeee
Confidence            433334445432   1112478888888877 4555555

>smart00656 Amb_all Amb_all domain

Probab=96.76  E-value=0.032  Score=51.73  Aligned_cols=131  Identities=17%  Similarity=0.150  Sum_probs=81.7

Q ss_pred             cCcceeeeccceEEeCCcEEEeeeccEEEeeeEEecCC----C-CCCCc-eEecCCCceEEEEceeeecCCCCceEeecC
Q 016742          130 SYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGK----G-PDVDA-IQIKPKSKHIWIDRCSLRDYDDGLIDITRE  203 (383)
Q Consensus       130 snkTI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~----~-~d~Da-I~i~~~s~nVwIDHcs~s~~~Dglidi~~~  203 (383)
                      .|++|.+........+.+|.+.+++||+|.+.+|..+.    . ...|+ +.+..++.+|=|-.|.|....-++|--..+
T Consensus        45 rnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~~h~~~~liG~~d  124 (190)
T smart00656       45 RNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFHNHWKVMLLGHSD  124 (190)
T ss_pred             eCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECceEecCCEEEEEccCC
Confidence            47777765332122345788888999999999999762    1 11344 455545778888888886544443322221


Q ss_pred             C------ceEEEeCceecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEcc
Q 016742          204 S------TDITVSRCHFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNW  269 (383)
Q Consensus       204 s------~~VTIS~n~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~  269 (383)
                      .      -.||+.+|+|.+..- .-++.         .-.+=+-+|+|.+.....--++. +.+.+.||||.+.
T Consensus       125 ~~~~~~~~~vT~h~N~~~~~~~R~P~~r---------~g~~hv~NN~~~n~~~~~~~~~~~~~v~~E~N~F~~~  189 (190)
T smart00656      125 SDTDDGKMRVTIAHNYFGNLRQRAPRVR---------FGYVHVYNNYYTGWTSYAIGGRMGATILSEGNYFEAP  189 (190)
T ss_pred             CccccccceEEEECcEEcCcccCCCccc---------CCEEEEEeeEEeCcccEeEecCCCcEEEEECeEEECC
Confidence            2      269999999975321 11111         11567788999887644333332 5789999999863

>PLN02713 Probable pectinesterase/pectinesterase inhibitor

Probab=96.76  E-value=0.085  Score=56.80  Aligned_cols=120  Identities=16%  Similarity=0.408  Sum_probs=77.0

Q ss_pred             CCCCCc---hHHHhhhcC-------CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-C-------C-----
Q 016742           93 ADDGPG---SLREGCRMK-------EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-G-------K-----  146 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~-------~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G-------~-----  146 (383)
                      +.+|.|   |+++||++-       ..|+||+-..|+.+  +.|.|.   +|+||+|.|.+-+|. +       .     
T Consensus       255 a~dGsG~f~TIq~Av~a~p~~~~~~~~~~vI~Ik~G~Y~--E~V~i~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~S  332 (566)
T PLN02713        255 NQNGTGNFTTINDAVAAAPNNTDGSNGYFVIYVTAGVYE--EYVSIPKNKKYLMMIGDGINQTVITGNRSVVDGWTTFNS  332 (566)
T ss_pred             CCCCCCCCCCHHHHHHhhhcccCCCCceEEEEEcCcEEE--EEEEecCCCceEEEEecCCCCcEEEcCCcccCCCccccc
Confidence            445665   678888652       12556665679984  667773   688999997544432 2       1     


Q ss_pred             -cEEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCC-----------------ceEeecCCceE
Q 016742          147 -GLRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDG-----------------LIDITRESTDI  207 (383)
Q Consensus       147 -gl~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dg-----------------lidi~~~s~~V  207 (383)
                       .+.+ .+++++.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..|=                 .+|+.-+.-.+
T Consensus       333 aT~~v-~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~a  411 (566)
T PLN02713        333 ATFAV-VGQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAV  411 (566)
T ss_pred             eeEEE-ECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccCCcceEECCCCEEEEeeEEecccceecccceE
Confidence             1344 489999999999986432 223444433578899999999765444                 44444445556


Q ss_pred             EEeCceec
Q 016742          208 TVSRCHFS  215 (383)
Q Consensus       208 TIS~n~f~  215 (383)
                      -+++|.|.
T Consensus       412 vfq~C~i~  419 (566)
T PLN02713        412 VFQNCNLY  419 (566)
T ss_pred             EEeccEEE
Confidence            67777774

>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]

Probab=96.72  E-value=0.041  Score=55.39  Aligned_cols=94  Identities=18%  Similarity=0.293  Sum_probs=68.6

Q ss_pred             eceEEEecceeEeccCcceeeeccceEEeCCc----EEEeeeccEEEeeeEEecCCC--CC-CCceEecCCCceEEEEce
Q 016742          116 VSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG----LRLKECEHVIICNLEFEGGKG--PD-VDAIQIKPKSKHIWIDRC  188 (383)
Q Consensus       116 vsG~I~l~~~l~V~snkTI~G~G~gi~I~G~g----l~i~~a~NVIIRnL~ir~g~~--~d-~DaI~i~~~s~nVwIDHc  188 (383)
                      .+|..  ...+.|+.-+|+.|. .++++.|.+    +++. +.++|||.|++|+...  .+ .-+|-+..+.+.-.|.||
T Consensus        39 i~g~~--~g~~vInr~l~l~ge-~ga~l~g~g~G~~vtv~-aP~~~v~Gl~vr~sg~~lp~m~agI~v~~~at~A~Vr~N  114 (408)
T COG3420          39 ISGRY--AGNFVINRALTLRGE-NGAVLDGGGKGSYVTVA-APDVIVEGLTVRGSGRSLPAMDAGIFVGRTATGAVVRHN  114 (408)
T ss_pred             Eeeee--cccEEEccceeeccc-cccEEecCCcccEEEEe-CCCceeeeEEEecCCCCcccccceEEeccCcccceEEcc
Confidence            34665  467888888999997 566777654    6775 9999999999996532  12 456666557788889999


Q ss_pred             eeecCCCCceEeecCCceEEEeCceec
Q 016742          189 SLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       189 s~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      .+..+.-|. .+ .++.++-|--|.+.
T Consensus       115 ~l~~n~~Gi-~l-~~s~d~~i~~n~i~  139 (408)
T COG3420         115 DLIGNSFGI-YL-HGSADVRIEGNTIQ  139 (408)
T ss_pred             cccccceEE-EE-eccCceEEEeeEEe
Confidence            998888884 44 45777777777765

>PLN02488 probable pectinesterase/pectinesterase inhibitor

Probab=96.72  E-value=0.091  Score=55.67  Aligned_cols=120  Identities=19%  Similarity=0.390  Sum_probs=78.5

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-----c--------E
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-----G--------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-----g--------l  148 (383)
                      +.+|.|   |+++||++-    ..|+||+-..|+.+  +.|.|.   +|+||+|.|.+-+|. +.     +        +
T Consensus       202 a~dGsG~f~TIq~AI~a~P~~~~~r~vI~Ik~GvY~--E~V~I~~~k~nItliGdg~~~TiIt~n~~~~~g~~T~~SATv  279 (509)
T PLN02488        202 AKDGSGKYNTVNAAIAAAPEHSRKRFVIYIKTGVYD--EIVRIGSTKPNLTLIGDGQDSTIITGNLSASNGKRTFYTATV  279 (509)
T ss_pred             CCCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeE--EEEEecCCCccEEEEecCCCceEEEEcccccCCCCceeeEEE
Confidence            335655   678888652    23566666679884  667773   689999998654443 21     1        2


Q ss_pred             EEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCC-----------------ceEeecCCceEEEe
Q 016742          149 RLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDG-----------------LIDITRESTDITVS  210 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dg-----------------lidi~~~s~~VTIS  210 (383)
                      .+ .++++|.|||+|+...+. ..-|+-++-.+....+.+|.|.-..|=                 .+|+.-+...+-++
T Consensus       280 ~v-~g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~GyQDTLy~~~~RqyyrdC~I~GtVDFIFG~a~avFq  358 (509)
T PLN02488        280 AS-NGDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGYQDALYPHRDRQFYRECFITGTVDFICGNAAAVFQ  358 (509)
T ss_pred             EE-EcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccCcceeeCCCCEEEEeeEEeeccceEecceEEEEE
Confidence            33 488999999999976432 234555544578899999999765444                 44444444556777


Q ss_pred             Cceec
Q 016742          211 RCHFS  215 (383)
Q Consensus       211 ~n~f~  215 (383)
                      +|.|.
T Consensus       359 ~C~I~  363 (509)
T PLN02488        359 FCQIV  363 (509)
T ss_pred             ccEEE
Confidence            77775

>PLN02506 putative pectinesterase/pectinesterase inhibitor

Probab=96.68  E-value=0.07  Score=57.06  Aligned_cols=97  Identities=21%  Similarity=0.429  Sum_probs=64.0

Q ss_pred             hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-eCC-----c--------EEEeeeccEE
Q 016742           99 SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-TGK-----G--------LRLKECEHVI  157 (383)
Q Consensus        99 SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~G~-----g--------l~i~~a~NVI  157 (383)
                      |+++||++    ...|.|||-..|+.+  +.|.|.   +|+||+|.|.+-+| .+.     +        +.+ .+++++
T Consensus       246 TIq~Av~a~p~~~~~r~vI~Vk~GvY~--E~V~I~~~k~~i~l~G~g~~~tiIt~~~~~~~g~~T~~saT~~v-~~~~F~  322 (537)
T PLN02506        246 TITEAINEAPNHSNRRYIIYVKKGVYK--ENIDMKKKKTNIMLVGDGIGQTVVTGNRNFMQGWTTFRTATVAV-SGRGFI  322 (537)
T ss_pred             CHHHHHHhchhcCCCcEEEEEeCCeee--EEEeccCCCceEEEEEcCCCCeEEEeCccccCCCCcccceEEEE-EcCCeE
Confidence            57888865    234667776789884  556663   78999999754443 321     1        233 489999


Q ss_pred             EeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCce
Q 016742          158 ICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       158 IRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                      .|||+|+...+. ..-++-++-.+.++.+.+|.|.-..|=|+
T Consensus       323 a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~QDTLy  364 (537)
T PLN02506        323 ARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQDTLY  364 (537)
T ss_pred             EEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeecccccce
Confidence            999999976432 12333333347889999999976555443

>PLN02665 pectinesterase family protein

Probab=96.68  E-value=0.12  Score=52.75  Aligned_cols=109  Identities=15%  Similarity=0.224  Sum_probs=71.3

Q ss_pred             hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceE-EeCC------------cEEEeeeccEEE
Q 016742           99 SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVK-LTGK------------GLRLKECEHVII  158 (383)
Q Consensus        99 SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~-I~G~------------gl~i~~a~NVII  158 (383)
                      |+++||++-    ..|+||+-..|+.+  +.|.|.   +++||.|.+...+ |...            .+.+ .+++++.
T Consensus        82 TIq~AIdaiP~~~~~r~vI~Ik~GvY~--EkV~Ip~~kp~Itl~G~~~~~tiIt~~~~a~~~gT~~SaTv~v-~a~~F~a  158 (366)
T PLN02665         82 TITDAIKSIPAGNTQRVIIDIGPGEYN--EKITIDRSKPFVTLYGSPGAMPTLTFDGTAAKYGTVYSATLIV-ESDYFMA  158 (366)
T ss_pred             CHHHHHhhCcccCCceEEEEEeCcEEE--EEEEecCCCCEEEEEecCCCCCEEEECCccCCCCCcceEEEEE-ECCCeEE
Confidence            788999752    23566666679884  667773   6889999965333 3211            1344 4899999


Q ss_pred             eeeEEecCCC--------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          159 CNLEFEGGKG--------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       159 RnL~ir~g~~--------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      +||+|+....        ...-|+.+  .+..+.+.+|.|.-..|=|++-.   ..--+.+|.|.
T Consensus       159 ~nitf~Nta~~~~~~~~g~QAVAl~v--~gDka~f~~C~f~G~QDTL~~~~---gr~yf~~CyIe  218 (366)
T PLN02665        159 ANIIIKNSAPRPDGKRKGAQAVAMRI--SGDKAAFYNCRFIGFQDTLCDDK---GRHFFKDCYIE  218 (366)
T ss_pred             EeeEEEeCCCCcCCCCCCcceEEEEE--cCCcEEEEcceeccccceeEeCC---CCEEEEeeEEe
Confidence            9999997532        11234445  46889999999988877776542   23344555554

>PLN02745 Putative pectinesterase/pectinesterase inhibitor

Probab=96.67  E-value=0.1  Score=56.55  Aligned_cols=120  Identities=23%  Similarity=0.415  Sum_probs=76.2

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-eCC-----c--------E
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-TGK-----G--------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~G~-----g--------l  148 (383)
                      +.+|.|   |+++||++-    ..|+||+-..|+.+  +.|.|.   +|+||+|.|.+-+| .+.     +        |
T Consensus       290 a~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~--E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~saT~  367 (596)
T PLN02745        290 AKDGSGNFTTISDALAAMPAKYEGRYVIYVKQGIYD--ETVTVDKKMVNVTMYGDGSQKTIVTGNKNFADGVRTFRTATF  367 (596)
T ss_pred             CCCCCCCcccHHHHHHhccccCCceEEEEEeCCeeE--EEEEEcCCCceEEEEecCCCceEEEECCcccCCCcceeeEEE
Confidence            334555   688898652    23566665679884  567774   58999999865443 321     1        3


Q ss_pred             EEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCc-----------------eEeecCCceEEEe
Q 016742          149 RLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGL-----------------IDITRESTDITVS  210 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dgl-----------------idi~~~s~~VTIS  210 (383)
                      .+ .+++++.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..|=|                 +|+.-+.-..-++
T Consensus       368 ~v-~~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~avf~  446 (596)
T PLN02745        368 VA-LGEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQDTLYAQTHRQFYRSCVITGTIDFIFGDAAAIFQ  446 (596)
T ss_pred             EE-EcCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecccccccCCCcEEEEeeEEEeeccEEecceeEEEE
Confidence            33 489999999999975432 1233433334788999999997655544                 4444444455566


Q ss_pred             Cceec
Q 016742          211 RCHFS  215 (383)
Q Consensus       211 ~n~f~  215 (383)
                      +|.|.
T Consensus       447 ~C~i~  451 (596)
T PLN02745        447 NCLIF  451 (596)
T ss_pred             ecEEE
Confidence            66664

>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional

Probab=96.64  E-value=0.095  Score=56.12  Aligned_cols=118  Identities=16%  Similarity=0.376  Sum_probs=77.4

Q ss_pred             CCCc---hHHHhhhcC---C----CeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-------------c
Q 016742           95 DGPG---SLREGCRMK---E----PLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-------------G  147 (383)
Q Consensus        95 ~g~G---SLr~ai~~~---~----Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-------------g  147 (383)
                      +|.|   |+++||++-   .    -|+||+-..|+.+  +.|.|.   .|+||+|.|.+-+|. +.             .
T Consensus       230 dGsG~f~TI~~Av~a~p~~~~~~~~r~vI~vk~G~Y~--E~V~i~~~k~~i~l~G~g~~~tiIt~~~~~~dg~~T~~saT  307 (538)
T PLN03043        230 YGTDNFTTITDAIAAAPNNSKPEDGYFVIYAREGYYE--EYVVVPKNKKNIMLIGDGINKTIITGNHSVVDGWTTFNSST  307 (538)
T ss_pred             CCCCCCcCHHHHHHhccccCCCCcceEEEEEcCeeeE--EEEEeCCCCCcEEEEecCCCCeEEEeCCccCCCCccccceE
Confidence            4555   678888642   1    2566666789984  667773   799999998554433 21             1


Q ss_pred             EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCC-----------------CceEeecCCceEEE
Q 016742          148 LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDD-----------------GLIDITRESTDITV  209 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~D-----------------glidi~~~s~~VTI  209 (383)
                      +.+ .++++|.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..|                 |.+|+.-+.-.+-+
T Consensus       308 ~~v-~~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gyQDTLy~~~~rq~y~~c~I~GtVDFIFG~a~avf  386 (538)
T PLN03043        308 FAV-SGERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIF  386 (538)
T ss_pred             EEE-ECCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeccCcccccCCCcEEEEeeEEeeccceEeecceeee
Confidence            334 489999999999976432 23444444357889999999975544                 44454445556777


Q ss_pred             eCceec
Q 016742          210 SRCHFS  215 (383)
Q Consensus       210 S~n~f~  215 (383)
                      ++|.|.
T Consensus       387 q~c~i~  392 (538)
T PLN03043        387 QNCNLY  392 (538)
T ss_pred             eccEEE
Confidence            888775

>PLN02201 probable pectinesterase/pectinesterase inhibitor

Probab=96.62  E-value=0.11  Score=55.50  Aligned_cols=103  Identities=19%  Similarity=0.396  Sum_probs=67.1

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe--------CC------cE
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT--------GK------GL  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~--------G~------gl  148 (383)
                      +.+|.|   |+++||++-    ..|++|+-..|+.+  +.|.|.   +|+||+|.|.+-+|.        |.      .+
T Consensus       211 a~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~--E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~SAT~  288 (520)
T PLN02201        211 AADGTGNFTTIMDAVLAAPDYSTKRYVIYIKKGVYL--ENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATF  288 (520)
T ss_pred             cCCCCCCccCHHHHHHhchhcCCCcEEEEEeCceeE--EEEEecCCCceEEEEecCCCCcEEEeCCccCCCCcccceEEE
Confidence            335555   688888652    23566666679884  667774   689999997544332        11      13


Q ss_pred             EEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCce
Q 016742          149 RLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                      .+ .+++++.+||+|+...+. ..-|+-++-.+....+.+|.|.-..|=|+
T Consensus       289 ~v-~~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~QDTLy  338 (520)
T PLN02201        289 AV-SGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQDTLY  338 (520)
T ss_pred             EE-ECCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeeccCCeeE
Confidence            33 389999999999976432 22344443347889999999976655544

>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3

Probab=96.60  E-value=0.051  Score=53.98  Aligned_cols=109  Identities=17%  Similarity=0.341  Sum_probs=65.9

Q ss_pred             hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceE-EeCC-------------cEEEeeeccEE
Q 016742           99 SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVK-LTGK-------------GLRLKECEHVI  157 (383)
Q Consensus        99 SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~-I~G~-------------gl~i~~a~NVI  157 (383)
                      ++++||+.    ...+++||-..|+.+  +.|.|.   +++||+|.|..-+ |.+.             .|.+. +++++
T Consensus        14 TIq~Aida~p~~~~~~~~I~I~~G~Y~--E~V~i~~~k~~v~l~G~~~~~tiI~~~~~~~~~~~t~~saT~~v~-a~~f~   90 (298)
T PF01095_consen   14 TIQAAIDAAPDNNTSRYTIFIKPGTYR--EKVTIPRSKPNVTLIGEGRDKTIITGNDNAADGGGTFRSATFSVN-ADDFT   90 (298)
T ss_dssp             SHHHHHHHS-SSSSS-EEEEE-SEEEE----EEE-STSTTEEEEES-TTTEEEEE---TTTB-HCGGC-SEEE--STT-E
T ss_pred             CHHHHHHhchhcCCceEEEEEeCeeEc--cccEeccccceEEEEecCCCceEEEEecccccccccccccccccc-cccee
Confidence            57888875    223566666789985  667775   5899999975433 4331             14554 89999


Q ss_pred             EeeeEEecCCC---CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          158 ICNLEFEGGKG---PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       158 IRnL~ir~g~~---~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      ++||+|+...+   ...-||.+.  +.++.+.+|.|.-..|-|+.-   ....-+.+|.|.
T Consensus        91 ~~nit~~Nt~g~~~~qAvAl~~~--~d~~~f~~c~~~g~QDTL~~~---~~r~y~~~c~Ie  146 (298)
T PF01095_consen   91 AENITFENTAGPSGGQAVALRVS--GDRAAFYNCRFLGYQDTLYAN---GGRQYFKNCYIE  146 (298)
T ss_dssp             EEEEEEEEHCSGSG----SEEET---TSEEEEEEEEE-STT-EEE----SSEEEEES-EEE
T ss_pred             eeeeEEecCCCCcccceeeeeec--CCcEEEEEeEEccccceeeec---cceeEEEeeEEE
Confidence            99999996432   123566664  678999999999888876643   245666788776

1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....

>PLN02313 Pectinesterase/pectinesterase inhibitor

Probab=96.59  E-value=0.15  Score=55.25  Aligned_cols=119  Identities=16%  Similarity=0.360  Sum_probs=78.3

Q ss_pred             CCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-------------cEE
Q 016742           94 DDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-------------GLR  149 (383)
Q Consensus        94 d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-------------gl~  149 (383)
                      .+|.|   |+++||++-    ..|.||+-..|+.+  +.+.|.   .|++|+|.|.+-+|. +.             .+.
T Consensus       281 ~dGsG~f~TI~~Av~a~p~~~~~r~vI~ik~GvY~--E~V~i~~~k~ni~l~Gdg~~~TiIt~~~~~~~g~~t~~sat~~  358 (587)
T PLN02313        281 ADGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYR--ENVEVTKKKKNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVA  358 (587)
T ss_pred             CCCCCCCccHHHHHHhccccCCceEEEEEeCceeE--EEEEeCCCCCeEEEEecCCCccEEEeCCcccCCCCceeeEEEE
Confidence            34555   678888652    23666666779874  567774   689999998654443 21             123


Q ss_pred             EeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCC-----------------CCceEeecCCceEEEeC
Q 016742          150 LKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVSR  211 (383)
Q Consensus       150 i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~-----------------Dglidi~~~s~~VTIS~  211 (383)
                      + .+++++.|||+|+...+. ..-|+-++-.+....+.+|.|.-..                 .|.+|+.-+...+-+++
T Consensus       359 v-~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~QDTLy~~~~rq~y~~c~I~GtvDFIFG~a~avfq~  437 (587)
T PLN02313        359 A-VGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQD  437 (587)
T ss_pred             E-ECCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEecccchhccCCCcEEEEeeEEeeccceeccceeEEEEc
Confidence            3 479999999999976432 2234433334788999999997543                 45555555566677888


Q ss_pred             ceec
Q 016742          212 CHFS  215 (383)
Q Consensus       212 n~f~  215 (383)
                      |.|.
T Consensus       438 c~i~  441 (587)
T PLN02313        438 CDIN  441 (587)
T ss_pred             cEEE
Confidence            8886

>PLN02304 probable pectinesterase

Probab=96.56  E-value=0.032  Score=57.16  Aligned_cols=115  Identities=15%  Similarity=0.171  Sum_probs=77.0

Q ss_pred             CCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEe---ccCcceeeeccceEE-eC-------------CcEEE
Q 016742           95 DGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQRVKL-TG-------------KGLRL  150 (383)
Q Consensus        95 ~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~gi~I-~G-------------~gl~i  150 (383)
                      +|.|   |+++||++-    ..|++|+-..|+.+  +.|.|   ++|+||.|+|..-++ ..             ..+.+
T Consensus        82 dGsGdf~TIQ~AIdavP~~~~~r~vI~Ik~GvY~--EkV~Ip~~K~~Itl~G~g~~~TiIt~~~~a~~~~gT~~SaTv~v  159 (379)
T PLN02304         82 NGCCNFTTVQSAVDAVGNFSQKRNVIWINSGIYY--EKVTVPKTKPNITFQGQGFDSTAIAWNDTAKSANGTFYSASVQV  159 (379)
T ss_pred             CCCCCccCHHHHHhhCcccCCCcEEEEEeCeEeE--EEEEECCCCCcEEEEecCCCCcEEEccCcccCCCCccceEEEEE
Confidence            4554   788999752    23566666789874  66777   379999999754443 21             11334


Q ss_pred             eeeccEEEeeeEEecCCCC------CCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          151 KECEHVIICNLEFEGGKGP------DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       151 ~~a~NVIIRnL~ir~g~~~------d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                       .+++++.+||+|+.....      ..-|+-+.-.+..+.+.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       160 -~a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~gDra~fy~C~f~G~QDTLy~~---~gR~Yf~~CyIe  226 (379)
T PLN02304        160 -FASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIAGDQAAFWGCGFFGAQDTLHDD---RGRHYFKDCYIQ  226 (379)
T ss_pred             -ECCCeEEEeeEEEecCCCCCCCCCCccEEEEEecCCcEEEEeceEecccceeEeC---CCCEEEEeeEEc
Confidence             389999999999975311      1224433334788999999999999988753   234556777776

>PLN02995 Probable pectinesterase/pectinesterase inhibitor

Probab=96.52  E-value=0.033  Score=59.60  Aligned_cols=117  Identities=21%  Similarity=0.417  Sum_probs=76.8

Q ss_pred             CCCCCc---hHHHhhhcC------CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-----c-------
Q 016742           93 ADDGPG---SLREGCRMK------EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-----G-------  147 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~------~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-----g-------  147 (383)
                      +.+|.|   |+++||++-      ..|+||+-..|+.+  +.|.|.   +|+|++|.|.+-+|. +.     +       
T Consensus       228 a~dGsG~f~TIq~Ai~a~p~~~~~~~r~vI~Ik~G~Y~--E~V~i~~~k~~i~l~G~g~~~TvIt~~~~~~~~~~T~~Sa  305 (539)
T PLN02995        228 AKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQ--ENINVRLNNDDIMLVGDGMRSTIITGGRSVKGGYTTYNSA  305 (539)
T ss_pred             CCCCCCCccCHHHHHHhcccccCCCceEEEEEeCCEeE--EEEEecCCCCcEEEEEcCCCCeEEEeCCccCCCCcccceE
Confidence            445666   788999752      23566665679984  567773   699999998654443 21     1       


Q ss_pred             -EEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          148 -LRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       148 -l~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                       +.+ .+++++.|||+|+...+. ..-|+-++-.+....+.+|.|.-..|-|++-.   ..--..+|.|.
T Consensus       306 T~~v-~~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~QDTLy~~~---~Rqyy~~C~I~  371 (539)
T PLN02995        306 TAGI-EGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHS---QRQFYRECYIY  371 (539)
T ss_pred             EEEE-ECCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEecccchhccCC---CceEEEeeEEe
Confidence             334 489999999999976432 23444444357889999999998877766432   23344555554

>PLN02468 putative pectinesterase/pectinesterase inhibitor

Probab=96.51  E-value=0.13  Score=55.47  Aligned_cols=118  Identities=18%  Similarity=0.384  Sum_probs=75.6

Q ss_pred             CCCc---hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-e-------CC------cEEE
Q 016742           95 DGPG---SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-T-------GK------GLRL  150 (383)
Q Consensus        95 ~g~G---SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~-------G~------gl~i  150 (383)
                      +|.|   |.++||++    ...|.||+-..|+.+  +.+.|.   .|+||+|.|.+-+| .       |.      .+.+
T Consensus       265 dGsg~f~tI~~Av~a~p~~~~~~~vI~ik~GvY~--E~V~i~~~k~~i~~~G~g~~~tiIt~~~~~~dg~~t~~saT~~v  342 (565)
T PLN02468        265 DGSGKYKTISEALKDVPEKSEKRTIIYVKKGVYF--ENVRVEKKKWNVVMVGDGMSKTIVSGSLNFVDGTPTFSTATFAV  342 (565)
T ss_pred             CCCCCccCHHHHHHhchhcCCCcEEEEEeCCceE--EEEEecCCCCeEEEEecCCCCCEEEeCCccCCCCCccceeeeeE
Confidence            4555   67788865    233566666789884  567774   58899999764444 2       11      1333


Q ss_pred             eeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCC-----------------CceEeecCCceEEEeCc
Q 016742          151 KECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDD-----------------GLIDITRESTDITVSRC  212 (383)
Q Consensus       151 ~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~D-----------------glidi~~~s~~VTIS~n  212 (383)
                       .+++++.|||+|+...+. ..-|+-++-.+..+.+.+|.|.-..|                 |.+|+.-+.-.+-+++|
T Consensus       343 -~~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~QDTLy~~~~rq~y~~C~I~GtvDFIFG~a~avfq~c  421 (565)
T PLN02468        343 -FGKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQDTLYAHAQRQFYRECNIYGTVDFIFGNSAVVFQNC  421 (565)
T ss_pred             -ECCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEeccchhccCCCceEEEeeEEecccceeeccceEEEecc
Confidence             379999999999976432 12344443357889999999975544                 44444445555666777


Q ss_pred             eec
Q 016742          213 HFS  215 (383)
Q Consensus       213 ~f~  215 (383)
                      .|.
T Consensus       422 ~i~  424 (565)
T PLN02468        422 NIL  424 (565)
T ss_pred             EEE
Confidence            664

>PLN02497 probable pectinesterase

Probab=96.42  E-value=0.26  Score=49.73  Aligned_cols=111  Identities=13%  Similarity=0.235  Sum_probs=71.9

Q ss_pred             hHHHhhhc----CCCeEEEEEeceEEEecceeEe---ccCcceeeeccceE-EeC---------CcEEEeeeccEEEeee
Q 016742           99 SLREGCRM----KEPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQRVK-LTG---------KGLRLKECEHVIICNL  161 (383)
Q Consensus        99 SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~gi~-I~G---------~gl~i~~a~NVIIRnL  161 (383)
                      |+++||++    ...+++|+-..|+.  .+.|.|   ++++||.|+|..-+ |..         ..+.+ .+++++.+||
T Consensus        46 TIq~AIdavP~~~~~~~~I~Ik~G~Y--~EkV~Ip~~k~~itl~G~g~~~tiIt~~~~~~t~~SaT~~v-~a~~f~a~nl  122 (331)
T PLN02497         46 TIQSAIDSVPSNNKHWFCINVKAGLY--REKVKIPYDKPFIVLVGAGKRRTRIEWDDHDSTAQSPTFST-LADNTVVKSI  122 (331)
T ss_pred             CHHHHHhhccccCCceEEEEEeCcEE--EEEEEecCCCCcEEEEecCCCCceEEEeccccccCceEEEE-ecCCeEEEcc
Confidence            68888865    22355555567988  466777   37899999975333 321         12444 4899999999


Q ss_pred             EEecCCCC--------CCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          162 EFEGGKGP--------DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       162 ~ir~g~~~--------d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      +|+...+.        ..-|+-+.-.+.++-+.+|.|.-..|=|++-   ...--..+|.|.
T Consensus       123 T~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~QDTLy~~---~gRqyf~~C~Ie  181 (331)
T PLN02497        123 TFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQDTLWDS---DGRHYFKRCTIQ  181 (331)
T ss_pred             EEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccccceeeC---CCcEEEEeCEEE
Confidence            99975321        1124444334788999999999888877643   234445566554

>PLN02484 probable pectinesterase/pectinesterase inhibitor

Probab=96.36  E-value=0.24  Score=53.58  Aligned_cols=121  Identities=20%  Similarity=0.390  Sum_probs=77.1

Q ss_pred             CCCCCc---hHHHhhhcC----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-CC-----c--------E
Q 016742           93 ADDGPG---SLREGCRMK----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-GK-----G--------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G~-----g--------l  148 (383)
                      +.+|.|   |+++||++-    ..|+||+-..|+.+-+ .|.|.   +|+||+|.|.+-+|. +.     +        +
T Consensus       277 a~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~-~v~i~~~k~ni~l~G~g~~~TiIt~~~~~~~~~~t~~saT~  355 (587)
T PLN02484        277 SKDGNGTFKTISEAIKKAPEHSSRRTIIYVKAGRYEEN-NLKVGRKKTNLMFIGDGKGKTVITGGKSIFDNLTTFHTASF  355 (587)
T ss_pred             CCCCCCCcccHHHHHHhccccCCCcEEEEEeCCEEEEE-EEEECCCCceEEEEecCCCCeEEecCCcccCCCcccceEEE
Confidence            445555   578898652    2366676678998531 47774   689999998654443 21     1        2


Q ss_pred             EEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCC-----------------ceEeecCCceEEEe
Q 016742          149 RLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDG-----------------LIDITRESTDITVS  210 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dg-----------------lidi~~~s~~VTIS  210 (383)
                      .+ .+++++.|||+|+...+. ..-|+-++-.+....+.+|.|.-..|=                 .+|+.-+.-..-++
T Consensus       356 ~v-~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~QDTLy~~~~Rqyy~~C~I~GtVDFIFG~a~avfq  434 (587)
T PLN02484        356 AA-TGAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQ  434 (587)
T ss_pred             EE-EcCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEeccCcccccCCCcEEEEecEEEeccceecccceeEEe
Confidence            33 489999999999976432 123444433478899999999765444                 44444444556667


Q ss_pred             Cceec
Q 016742          211 RCHFS  215 (383)
Q Consensus       211 ~n~f~  215 (383)
                      +|.|.
T Consensus       435 ~C~i~  439 (587)
T PLN02484        435 NCSIY  439 (587)
T ss_pred             ccEEE
Confidence            77764

>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]

Probab=96.35  E-value=0.086  Score=53.13  Aligned_cols=92  Identities=15%  Similarity=0.089  Sum_probs=69.5

Q ss_pred             eeEeccCcceeeeccceEEeCC--cEEEeeeccEEEeeeEEecCCC----CCCCceEecCCCceEEEEceeeecCCCCce
Q 016742          125 HLSVSSYKTIDGRGQRVKLTGK--GLRLKECEHVIICNLEFEGGKG----PDVDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       125 ~l~V~snkTI~G~G~gi~I~G~--gl~i~~a~NVIIRnL~ir~g~~----~d~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                      .|.|....|-++. ....|.|.  ||.+.++.++.|+.-+|.+-..    ..++||.+. ++..+-|--+.++...|++.
T Consensus        99 gI~v~~~at~A~V-r~N~l~~n~~Gi~l~~s~d~~i~~n~i~G~~~~r~~~rGnGI~vy-Na~~a~V~~ndisy~rDgIy  176 (408)
T COG3420          99 GIFVGRTATGAVV-RHNDLIGNSFGIYLHGSADVRIEGNTIQGLADLRVAERGNGIYVY-NAPGALVVGNDISYGRDGIY  176 (408)
T ss_pred             eEEeccCcccceE-EcccccccceEEEEeccCceEEEeeEEeeccccchhhccCceEEE-cCCCcEEEcCccccccceEE
Confidence            4666666666665 22235544  5778889999999999987542    348999998 89999999999999999954


Q ss_pred             EeecCCceEEEeCceecCCCce
Q 016742          199 DITRESTDITVSRCHFSSHDKT  220 (383)
Q Consensus       199 di~~~s~~VTIS~n~f~~H~k~  220 (383)
                       + .-|..-+++.|.|++-.++
T Consensus       177 -~-~~S~~~~~~gnr~~~~Ryg  196 (408)
T COG3420         177 -S-DTSQHNVFKGNRFRDLRYG  196 (408)
T ss_pred             -E-cccccceecccchhheeee
Confidence             3 3477888999999865554

>PLN02708 Probable pectinesterase/pectinesterase inhibitor

Probab=96.34  E-value=0.027  Score=60.42  Aligned_cols=103  Identities=18%  Similarity=0.337  Sum_probs=68.9

Q ss_pred             CCCCCc---hHHHhhhcC-----CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-C------Cc-------
Q 016742           93 ADDGPG---SLREGCRMK-----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-G------KG-------  147 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~-----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G------~g-------  147 (383)
                      +.+|.|   |+++||++-     ..|.||+-..|+.+  +.|.|.   .|+||+|.|.+-+|. +      .|       
T Consensus       246 a~dGsg~f~TIq~Av~a~p~~~~~~r~vI~vk~GvY~--E~V~i~~~k~~v~l~G~g~~~TiIt~~~~~~~~g~~T~~sa  323 (553)
T PLN02708        246 CKDGNCCYKTVQEAVNAAPDNNGDRKFVIRIKEGVYE--ETVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGISTYNTA  323 (553)
T ss_pred             CCCCCCCccCHHHHHHhhhhccCCccEEEEEeCceEE--eeeeecCCCccEEEEecCCCceEEEecCccCCCCcCccceE
Confidence            445555   678888652     23667776789885  566663   689999998654443 1      12       


Q ss_pred             -EEEeeeccEEEeeeEEecCCCCC-CCceEecCCCceEEEEceeeecCCCCce
Q 016742          148 -LRLKECEHVIICNLEFEGGKGPD-VDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       148 -l~i~~a~NVIIRnL~ir~g~~~d-~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                       +.+ .+++++.|||+|+...+.+ .-|+-++-.+..+.+.+|.|.-..|=|+
T Consensus       324 T~~v-~~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~QDTLy  375 (553)
T PLN02708        324 TVGV-LGDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLY  375 (553)
T ss_pred             EEEE-EcCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeeccccce
Confidence             334 4899999999999865422 3455444457899999999976555543

>PLN02314 pectinesterase

Probab=96.31  E-value=0.033  Score=60.17  Aligned_cols=104  Identities=20%  Similarity=0.377  Sum_probs=69.3

Q ss_pred             CCCCCc---hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-eCC-----c--------E
Q 016742           93 ADDGPG---SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-TGK-----G--------L  148 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~G~-----g--------l  148 (383)
                      +.+|.|   |+++||++    ...|+||+-..|+.+  +.+.|.   .|+||.|.|.+-+| .+.     |        |
T Consensus       283 a~dGsg~f~TI~~Av~a~p~~~~~r~vI~ik~G~Y~--E~V~i~~~k~~i~l~G~g~~~tiIt~~~~~~~g~~t~~saT~  360 (586)
T PLN02314        283 AKDGSGDVKTINEAVASIPKKSKSRFVIYVKEGTYV--ENVLLDKSKWNVMIYGDGKDKTIISGSLNFVDGTPTFSTATF  360 (586)
T ss_pred             CCCCCCCccCHHHHHhhccccCCceEEEEEcCceEE--EEEEecCCCceEEEEecCCCCcEEEecCCcCCCCCccceEEE
Confidence            334555   68888865    234667776789984  567673   68999999754443 321     1        3


Q ss_pred             EEeeeccEEEeeeEEecCCCCC-CCceEecCCCceEEEEceeeecCCCCceE
Q 016742          149 RLKECEHVIICNLEFEGGKGPD-VDAIQIKPKSKHIWIDRCSLRDYDDGLID  199 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~d-~DaI~i~~~s~nVwIDHcs~s~~~Dglid  199 (383)
                      .+ .+++++.|||+|+...+.. .-|+-++-.+....+.+|.|.-..|=|++
T Consensus       361 ~v-~~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~QDTLy~  411 (586)
T PLN02314        361 AA-AGKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYA  411 (586)
T ss_pred             EE-EcCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEeccchhee
Confidence            33 4899999999999764322 23444443578899999999877666543

>PLN02916 pectinesterase family protein

Probab=96.31  E-value=0.23  Score=52.76  Aligned_cols=103  Identities=19%  Similarity=0.375  Sum_probs=66.6

Q ss_pred             CCCCCc---hHHHhhhcC-------CCeEEEEEeceEEEecceeEec---cCcceeeeccceEEe-C-------C-----
Q 016742           93 ADDGPG---SLREGCRMK-------EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKLT-G-------K-----  146 (383)
Q Consensus        93 ~d~g~G---SLr~ai~~~-------~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I~-G-------~-----  146 (383)
                      +.+|.|   |+++||++-       ..|+||+-..|+.+  +.+.|.   +|+||+|.|.+-+|. +       .     
T Consensus       192 a~dGsG~f~TIq~AI~a~P~~~~~~~~r~vI~Ik~GvY~--E~V~I~~~k~~i~l~G~g~~~TiIt~~~~~~~g~~T~~S  269 (502)
T PLN02916        192 ARDGSGTHRTINQALAALSRMGKSRTNRVIIYVKAGVYN--EKVEIDRHMKNVMFVGDGMDKTIITNNRNVPDGSTTYSS  269 (502)
T ss_pred             CCCCCCCccCHHHHHHhcccccCCCCceEEEEEeCceee--EEEEecCCCceEEEEecCCCCcEEEeCCccCCCCcceee
Confidence            334544   678888542       23666666779884  667774   689999997544433 1       1     


Q ss_pred             -cEEEeeeccEEEeeeEEecCCCC-CCCceEecCCCceEEEEceeeecCCCCce
Q 016742          147 -GLRLKECEHVIICNLEFEGGKGP-DVDAIQIKPKSKHIWIDRCSLRDYDDGLI  198 (383)
Q Consensus       147 -gl~i~~a~NVIIRnL~ir~g~~~-d~DaI~i~~~s~nVwIDHcs~s~~~Dgli  198 (383)
                       .+.+ .+++++.|||+|+...+. ..-|+-++-.+....+.+|.|.-..|=|+
T Consensus       270 AT~~v-~~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~QDTLy  322 (502)
T PLN02916        270 ATFGV-SGDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGYQDTLF  322 (502)
T ss_pred             EEEEE-ECCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccCceeE
Confidence             1333 389999999999976432 12333333247889999999976655544

>PLN02634 probable pectinesterase

Probab=96.02  E-value=0.11  Score=52.94  Aligned_cols=111  Identities=15%  Similarity=0.229  Sum_probs=71.6

Q ss_pred             hHHHhhhcC----CCeEEEEEeceEEEecceeEe---ccCcceeeeccceEEe------------CC--------cEEEe
Q 016742           99 SLREGCRMK----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQRVKLT------------GK--------GLRLK  151 (383)
Q Consensus        99 SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~gi~I~------------G~--------gl~i~  151 (383)
                      |+++||++-    ..+++|+-..|+.+  +.|.|   ++++||.|.|...+|.            |.        .+.+ 
T Consensus        70 TIQaAIda~P~~~~~r~vI~Ik~GvY~--EkV~Ip~~k~~ItL~G~g~~~TiIt~~~~a~~~~~~g~~~~T~~SaTv~V-  146 (359)
T PLN02634         70 SVQDAVDSVPKNNTMSVTIKINAGFYR--EKVVVPATKPYITFQGAGRDVTAIEWHDRASDRGANGQQLRTYQTASVTV-  146 (359)
T ss_pred             CHHHHHhhCcccCCccEEEEEeCceEE--EEEEEcCCCCeEEEEecCCCceEEEecccccccCCCCcccccccceEEEE-
Confidence            477888652    23455555679874  56777   3789999997655543            10        1334 


Q ss_pred             eeccEEEeeeEEecCCC------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          152 ECEHVIICNLEFEGGKG------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~~------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      .+++++.+||+|+....      ...-|+-+.-.+.++-+.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       147 ~a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~QDTL~~~---~gR~yf~~CyIe  213 (359)
T PLN02634        147 YANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGAQDTLCDD---AGRHYFKECYIE  213 (359)
T ss_pred             ECCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEecccceeeeC---CCCEEEEeeEEc
Confidence            38899999999997532      11233333324678999999999888887643   234555666665

>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A

Probab=95.95  E-value=0.027  Score=51.42  Aligned_cols=102  Identities=24%  Similarity=0.399  Sum_probs=55.9

Q ss_pred             CcceeeeccceEEe--CCcEEEeeeccEEEeeeEEecCCCCCCCceEe-------------------cCCCceEEEEcee
Q 016742          131 YKTIDGRGQRVKLT--GKGLRLKECEHVIICNLEFEGGKGPDVDAIQI-------------------KPKSKHIWIDRCS  189 (383)
Q Consensus       131 nkTI~G~G~gi~I~--G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i-------------------~~~s~nVwIDHcs  189 (383)
                      +++|.|.+..  ..  ..++.+..+.|+.|+|++++...   .++|.+                   +.+..+++++.|.
T Consensus        98 nl~i~~~~~~--~~~~~~~i~~~~~~~~~i~nv~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (225)
T PF12708_consen   98 NLTIDGNGID--PNNNNNGIRFNSSQNVSISNVRIENSG---GDGIYFNTGTDYRIIGSTHVSGIFIDNGSNNVIVNNCI  172 (225)
T ss_dssp             EEEEEETCGC--E-SCEEEEEETTEEEEEEEEEEEES-S---S-SEEEECCEECEEECCEEEEEEEEESCEEEEEEECEE
T ss_pred             eeEEEccccc--CCCCceEEEEEeCCeEEEEeEEEEccC---ccEEEEEccccCcEeecccceeeeeccceeEEEECCcc
Confidence            5777775322  22  34677777899999999999752   233322                   2111223334444


Q ss_pred             eecCCCCceEeecCCceEEEeCceecC-CCceeEecCCCCCCCCcceeEEEeceeecCCC
Q 016742          190 LRDYDDGLIDITRESTDITVSRCHFSS-HDKTMLIGADPSHVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       190 ~s~~~Dglidi~~~s~~VTIS~n~f~~-H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~  248 (383)
                      +..+.+| +  ..+.+++++++|.|.. ...++.+-...        .+++.+|.|.+|.
T Consensus       173 ~~~~~~g-~--~~~~~~~~i~n~~~~~~~~~gi~i~~~~--------~~~i~n~~i~~~~  221 (225)
T PF12708_consen  173 FNGGDNG-I--ILGNNNITISNNTFEGNCGNGINIEGGS--------NIIISNNTIENCD  221 (225)
T ss_dssp             EESSSCS-E--ECEEEEEEEECEEEESSSSESEEEEECS--------EEEEEEEEEESSS
T ss_pred             ccCCCce-e--EeecceEEEEeEEECCccceeEEEECCe--------EEEEEeEEEECCc
Confidence            5555666 2  2223677788887765 44444433221        3666666666654

...

>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4

Probab=95.67  E-value=0.16  Score=47.45  Aligned_cols=128  Identities=17%  Similarity=0.178  Sum_probs=76.3

Q ss_pred             cCcceeee---------ccceEEeCCcEEEeeeccEEEeeeEEecCCC----CCCCc-eEecCCCceEEEEceeeecCCC
Q 016742          130 SYKTIDGR---------GQRVKLTGKGLRLKECEHVIICNLEFEGGKG----PDVDA-IQIKPKSKHIWIDRCSLRDYDD  195 (383)
Q Consensus       130 snkTI~G~---------G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~~----~d~Da-I~i~~~s~nVwIDHcs~s~~~D  195 (383)
                      .|++|-+.         +....-.+..|.|.+++||+|.+.+|..+..    ...|+ |.+...+++|=|-+|-|.....
T Consensus        51 rNl~~~~~~~~~~~~~~~~~~~~~~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~~~~k  130 (200)
T PF00544_consen   51 RNLRFRNVPVDPGPDWSGDGDSSDGDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFDNHNK  130 (200)
T ss_dssp             ES-EEECEEEECSTEEETTEEECS--SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEEEEEE
T ss_pred             ECCEEEeccccCCcccCCCccccCCCeEEEEecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhcccccc
Confidence            36777773         2333334567999999999999999998721    11344 5665568899999998875422


Q ss_pred             CceE------eecCCceEEEeCceecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceE
Q 016742          196 GLID------ITRESTDITVSRCHFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYT  266 (383)
Q Consensus       196 glid------i~~~s~~VTIS~n~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~  266 (383)
                      .++.      .......||+-+|+|.+... .-++..         -.+-+-+|+|.+.....=.++. +++-+.||||
T Consensus       131 ~~l~G~~d~~~~~~~~~vT~hhN~f~~~~~R~P~~r~---------G~~Hv~NN~~~~~~~y~i~~~~~a~v~~E~N~F  200 (200)
T PF00544_consen  131 TMLIGSSDSNSTDRGLRVTFHHNYFANTNSRNPRVRF---------GYVHVYNNYYYNWSGYAIGARSGAQVLVENNYF  200 (200)
T ss_dssp             TCEESSCTTCGGGTTEEEEEES-EEEEEEE-TTEECS---------CEEEEES-EEEEECSESEEEETTEEEEEES-EE
T ss_pred             ccccCCCCCccccCCceEEEEeEEECchhhCCCcccc---------cEEEEEEeeeECCCCEEEEccCCeEEEEECcCC
Confidence            2221      11123689999999974321 112211         1578889999877776655554 4689999987

2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....

>PRK10531 acyl-CoA thioesterase; Provisional

Probab=95.51  E-value=0.35  Score=50.34  Aligned_cols=111  Identities=17%  Similarity=0.246  Sum_probs=70.6

Q ss_pred             CeEEecCCCCCCC---chHHHhhhcC-----CCeEEEEEeceEEEecceeEe---ccCcceeeecc---ceEEeCC----
Q 016742           85 PLYHVTTLADDGP---GSLREGCRMK-----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQ---RVKLTGK----  146 (383)
Q Consensus        85 ~v~~VTnl~d~g~---GSLr~ai~~~-----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~---gi~I~G~----  146 (383)
                      ..++|-. +.+|.   -|+++||++.     ..|++|+-..|+.+  +.|.|   .+++||.|.|.   +..|...    
T Consensus        80 ~~~vV~~-a~dGsGdf~TIQaAIdAa~~~~~~~r~~I~Ik~GvY~--EkV~Ip~~kp~ItL~G~G~~~~~TvIt~~~~~~  156 (422)
T PRK10531         80 PDFVVGP-AGTQGVTHTTVQAAVDAAIAKRTNKRQYIAVMPGTYQ--GTVYVPAAAPPITLYGTGEKPIDVKIGLALDGE  156 (422)
T ss_pred             CcEEEec-CCCCCCCccCHHHHHhhccccCCCceEEEEEeCceeE--EEEEeCCCCceEEEEecCCCCCceEEEecCccc
Confidence            4555542 22333   3688899742     23556665679884  66777   37899999763   3344321    


Q ss_pred             -------------------------------------c------EEEeeeccEEEeeeEEecCCCC-----CCCceEecC
Q 016742          147 -------------------------------------G------LRLKECEHVIICNLEFEGGKGP-----DVDAIQIKP  178 (383)
Q Consensus       147 -------------------------------------g------l~i~~a~NVIIRnL~ir~g~~~-----d~DaI~i~~  178 (383)
                                                           +      +.+ .+++++.+||+|+...+.     ..-|+-++-
T Consensus       157 ~~~~~~~~~~~~~g~~~~~~p~~y~~d~~~~~~~~~~gT~~SATv~v-~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv  235 (422)
T PRK10531        157 MSPADWRANVNPRGKYMPGKPAWYMYDSCQSKRAATIGTLCSAVFWS-QNNGLQLQNLTIENTLGDSVDAGNHPAVALRT  235 (422)
T ss_pred             cccccccccccccccccccccccccccccccccCCCcCceeeEEEEE-ECCCEEEEeeEEEeCCCCCCCCCcceeEEEEE
Confidence                                                 0      223 479999999999976421     122333332


Q ss_pred             CCceEEEEceeeecCCCCceE
Q 016742          179 KSKHIWIDRCSLRDYDDGLID  199 (383)
Q Consensus       179 ~s~nVwIDHcs~s~~~Dglid  199 (383)
                      .+..+.+.+|.|.-..|=|+.
T Consensus       236 ~GDra~fy~C~flG~QDTLy~  256 (422)
T PRK10531        236 DGDKVQIENVNILGRQDTFFV  256 (422)
T ss_pred             cCCcEEEEeeEEecccceeee
Confidence            468899999999988888775

>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]

Probab=95.36  E-value=0.41  Score=47.74  Aligned_cols=142  Identities=14%  Similarity=0.113  Sum_probs=86.3

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCC-----CCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYD-----DGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~-----Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      +.|+.++|+-|-.+--..  .--+-++.|+ .+.||+|...+|....     +..|.+..++.+|=|-+|.|..|....-
T Consensus        95 ~~iki~sNkTivG~g~~a--~~~g~gl~i~-~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~  171 (345)
T COG3866          95 ITIKIGSNKTIVGSGADA--TLVGGGLKIR-DAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNAS  171 (345)
T ss_pred             EEEeeccccEEEeecccc--EEEeceEEEE-eCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEecccccccc
Confidence            666656665554332100  0114678887 5899999999998655     3348887788999999999987655321


Q ss_pred             ecCCCCC--CCCcceeEEEeceeecCCCC---------cCCccccCeeEEEcceEEccccceeeecCCceEEEEceEEec
Q 016742          223 IGADPSH--VADRCIRVTIHHCFFDGTRQ---------RHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA  291 (383)
Q Consensus       223 iG~~d~~--~~d~~~~VT~hhN~f~~~~~---------R~Pr~r~G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~  291 (383)
                      --+.|..  .....-.|||-.|.|+++.-         -++--..-++.+-+|||.|.-..+=..|- .++.+-+|||+.
T Consensus       172 ~~h~DGl~Dik~~AnyITiS~n~fhdh~Kssl~G~sD~~~~~~~~~kvT~hhNyFkn~~qR~PriRf-G~vHvyNNYy~~  250 (345)
T COG3866         172 GSHGDGLVDIKKDANYITISYNKFHDHDKSSLLGSSDSSNYDDGKYKVTIHHNYFKNLYQRGPRIRF-GMVHVYNNYYEG  250 (345)
T ss_pred             ccCCCccEEeccCCcEEEEEeeeeecCCeeeeeccCCcccccCCceeEEEeccccccccccCCceEe-eEEEEecccccc
Confidence            1111111  11112479999999976532         22221112478889999987554332332 356677999994


Q ss_pred             CC
Q 016742          292 GQ  293 (383)
Q Consensus       292 g~  293 (383)
                      -+
T Consensus       251 ~~  252 (345)
T COG3866         251 NP  252 (345)
T ss_pred             Cc
Confidence            44

>PLN02671 pectinesterase

Probab=95.13  E-value=0.32  Score=49.62  Aligned_cols=109  Identities=13%  Similarity=0.209  Sum_probs=72.1

Q ss_pred             hHHHhhhcC----CCeEEEEEeceEEEecceeEe---ccCcceeeecc---ceEEeC-----------C--------cEE
Q 016742           99 SLREGCRMK----EPLWIVFEVSGTIHLRSHLSV---SSYKTIDGRGQ---RVKLTG-----------K--------GLR  149 (383)
Q Consensus        99 SLr~ai~~~----~Pr~IVf~vsG~I~l~~~l~V---~snkTI~G~G~---gi~I~G-----------~--------gl~  149 (383)
                      |+++||++-    ..+++|+-..|+.+  +.|.|   .+++||+|.|.   ...|..           .        .+.
T Consensus        73 TIQ~AIdavP~~~~~~~~I~Ik~GvY~--EkV~I~~~k~~Itl~G~g~~~~~TvIt~~~~a~~~~~~g~~~gT~~SaTv~  150 (359)
T PLN02671         73 TVQGAVDMVPDYNSQRVKIYILPGIYR--EKVLVPKSKPYISFIGNESRAGDTVISWNDKASDLDSNGFELGTYRTASVT  150 (359)
T ss_pred             CHHHHHHhchhcCCccEEEEEeCceEE--EEEEECCCCCeEEEEecCCCCCCEEEEcCCcccccccCCccccceeeEEEE
Confidence            688888652    22455555678874  66777   37899999863   334441           0        133


Q ss_pred             EeeeccEEEeeeEEecCCC-------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          150 LKECEHVIICNLEFEGGKG-------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       150 i~~a~NVIIRnL~ir~g~~-------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      + .+++++.+||+|+....       ...-|+.+  .+.++.+.+|.|.-..|=|++-   ...--+.+|.|.
T Consensus       151 v-~a~~F~a~nitfeNt~~~~~g~~~~QAVALrv--~gDra~f~~c~f~G~QDTLy~~---~gR~yf~~CyIe  217 (359)
T PLN02671        151 I-ESDYFCATGITFENTVVAEPGGQGMQAVALRI--SGDKAFFYKVRVLGAQDTLLDE---TGSHYFYQCYIQ  217 (359)
T ss_pred             E-ECCceEEEeeEEEcCCCCCCCCCCccEEEEEE--cCccEEEEcceEeccccccEeC---CCcEEEEecEEE
Confidence            3 47999999999997521       11344555  4688999999999988888754   234455677765

>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]

Probab=93.16  E-value=0.38  Score=51.54  Aligned_cols=135  Identities=20%  Similarity=0.317  Sum_probs=85.6

Q ss_pred             CCCeEEEEEeceEEEecc------e---e-Eec-cCcceeeeccceEEeC----CcEEEeeeccEEEeeeEEecCCCCCC
Q 016742          107 KEPLWIVFEVSGTIHLRS------H---L-SVS-SYKTIDGRGQRVKLTG----KGLRLKECEHVIICNLEFEGGKGPDV  171 (383)
Q Consensus       107 ~~Pr~IVf~vsG~I~l~~------~---l-~V~-snkTI~G~G~gi~I~G----~gl~i~~a~NVIIRnL~ir~g~~~d~  171 (383)
                      ..|+.|.|.--..+.+..      +   + .+. +|+||.+.  .|...+    .||.+..|+||.|.+.+|..+    .
T Consensus       236 ~rp~~~~l~~c~NV~~~g~~i~ns~~~~~h~~~~~nl~~~nl--~I~~~~~~NtDG~d~~sc~NvlI~~~~fdtg----D  309 (542)
T COG5434         236 VRPRTVVLKGCRNVLLEGLNIKNSPLWTVHPVDCDNLTFRNL--TIDANRFDNTDGFDPGSCSNVLIEGCRFDTG----D  309 (542)
T ss_pred             cCCceEEEeccceEEEeeeEecCCCcEEEeeecccCceecce--EEECCCCCCCCccccccceeEEEeccEEecC----C
Confidence            467777765444444321      1   1 122 56777664  111222    378998999999999999975    3


Q ss_pred             CceEec-----------CCCceEEEEceeeecCCCCceEee---cCCceEEEeCceecCCCceeEecCCCCCCCCcceeE
Q 016742          172 DAIQIK-----------PKSKHIWIDRCSLRDYDDGLIDIT---RESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRV  237 (383)
Q Consensus       172 DaI~i~-----------~~s~nVwIDHcs~s~~~Dglidi~---~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~V  237 (383)
                      |+|.+.           .-+++|||-||-|+.+.-+++.-.   .+-.+|++.+|.|.+-+.+.-|....... .+..+|
T Consensus       310 D~I~iksg~~~~~~~~~~~~~~i~i~~c~~~~ghG~~v~Gse~~ggv~ni~ved~~~~~~d~GLRikt~~~~g-G~v~nI  388 (542)
T COG5434         310 DCIAIKSGAGLDGKKGYGPSRNIVIRNCYFSSGHGGLVLGSEMGGGVQNITVEDCVMDNTDRGLRIKTNDGRG-GGVRNI  388 (542)
T ss_pred             ceEEeecccCCcccccccccccEEEecceecccccceEeeeecCCceeEEEEEeeeeccCcceeeeeeecccc-eeEEEE
Confidence            555443           125789999999998776655422   23579999999999876666555443211 112377


Q ss_pred             EEeceeecCCC
Q 016742          238 TIHHCFFDGTR  248 (383)
Q Consensus       238 T~hhN~f~~~~  248 (383)
                      +|+.+...+..
T Consensus       389 ~~~~~~~~nv~  399 (542)
T COG5434         389 VFEDNKMRNVK  399 (542)
T ss_pred             EEecccccCcc
Confidence            77777666554

>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A

Probab=89.10  E-value=0.92  Score=47.27  Aligned_cols=35  Identities=26%  Similarity=0.392  Sum_probs=17.2

Q ss_pred             eEEEeceeecCCCCc--CCcccc-Cee-EEEcceEEccc
Q 016742          236 RVTIHHCFFDGTRQR--HPRVRY-AKV-HLYNNYTRNWG  270 (383)
Q Consensus       236 ~VT~hhN~f~~~~~R--~Pr~r~-G~~-hv~NN~~~n~~  270 (383)
                      +-++..|+|-.+..+  ..-+|. +.- .|+|||+++..
T Consensus       246 ~n~V~gN~FiGng~~~~tGGIRIi~~~H~I~nNY~~gl~  284 (425)
T PF14592_consen  246 RNTVEGNVFIGNGVKEGTGGIRIIGEGHTIYNNYFEGLT  284 (425)
T ss_dssp             S-EEES-EEEE-SSSS-B--EEE-SBS-EEES-EEEESS
T ss_pred             CceEeccEEecCCCcCCCCceEEecCCcEEEcceeeccc
Confidence            346677777665543  355553 443 47788887653

>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina

Probab=87.53  E-value=3.8  Score=38.26  Aligned_cols=88  Identities=22%  Similarity=0.181  Sum_probs=54.6

Q ss_pred             ceEEEeCceecCCC-ce-eEecCCCCCCCCcceeEEEeceeecCCCCcCCccc--cC-------eeEEEcceEEccccce
Q 016742          205 TDITVSRCHFSSHD-KT-MLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR--YA-------KVHLYNNYTRNWGIYA  273 (383)
Q Consensus       205 ~~VTIS~n~f~~H~-k~-~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r--~G-------~~hv~NN~~~n~~~~a  273 (383)
                      ++|.|=+|.|.+-. .+ -|+|.......+...+|-+|||.|-.+.. +|.+.  .|       ..-+.||+|......|
T Consensus         2 ~dIEIYnN~I~~T~g~GIWl~gy~~~ysk~~a~nVhIhhN~fY~tGt-n~~~~wvGGIv~sGF~ntlIENNVfDG~y~aa   80 (198)
T PF08480_consen    2 DDIEIYNNTIYNTYGPGIWLFGYDGSYSKDSAKNVHIHHNIFYDTGT-NPNIDWVGGIVTSGFYNTLIENNVFDGVYHAA   80 (198)
T ss_pred             CceEEecceeecccCceEEEEecCCCCCccccccEEEECcEeecCCc-CCCCceeeeEEeccccccEEEeeeecccccce
Confidence            57888888887643 33 36787655555555699999999977643 45443  22       2478999998654433


Q ss_pred             ee----------ecCCceEEEEceEEecCC
Q 016742          274 VC----------ASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       274 ~~----------~~~~a~i~~e~Nyf~~g~  293 (383)
                      +.          .+.+=...+.+|.+.+..
T Consensus        81 i~~~y~~~~~sp~gsgyttivRNNII~NT~  110 (198)
T PF08480_consen   81 IAQMYPDYDLSPKGSGYTTIVRNNIIVNTR  110 (198)
T ss_pred             EEEEecccccCCCCCceEEEEEcceEeeee
Confidence            31          112223455677776643

Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.

>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]

Probab=81.62  E-value=19  Score=36.61  Aligned_cols=146  Identities=11%  Similarity=0.145  Sum_probs=87.8

Q ss_pred             chHHHhhhc-----CCCeEEEEEeceEEEecceeEec-cC--cceeeeccc--eEEe-----C---C--cEEE-------
Q 016742           98 GSLREGCRM-----KEPLWIVFEVSGTIHLRSHLSVS-SY--KTIDGRGQR--VKLT-----G---K--GLRL-------  150 (383)
Q Consensus        98 GSLr~ai~~-----~~Pr~IVf~vsG~I~l~~~l~V~-sn--kTI~G~G~g--i~I~-----G---~--gl~i-------  150 (383)
                      -|.++||++     ...|.+|+-..|+.  ++.|.|. ++  +|+.|.+..  -+..     +   .  +...       
T Consensus        95 ~TIQaAvdaA~~~~~~kr~yI~vk~GvY--~e~v~Vp~~~~~ITLyGed~~~~~tvIg~n~aagp~np~~~m~n~c~ss~  172 (405)
T COG4677          95 TTIQAAVDAAIIKRTNKRQYIAVKAGVY--QETVYVPAAPGGITLYGEDEKPIDTVIGLNLAAGPGNPAGYMYNSCQSSR  172 (405)
T ss_pred             HHHHHHHhhhcccCCCceEEEEEcccee--ceeEEecCCCCceeEEecCCCCcceEEEEecCCCCCCccceeecccccch
Confidence            467777765     22466666677887  4667775 55  899998643  1211     1   1  1111       


Q ss_pred             -------------eeeccEEEeeeEEecCCC--CCC---CceEecCCCceEEEEceeeecCCCCceEeecCCc-------
Q 016742          151 -------------KECEHVIICNLEFEGGKG--PDV---DAIQIKPKSKHIWIDRCSLRDYDDGLIDITREST-------  205 (383)
Q Consensus       151 -------------~~a~NVIIRnL~ir~g~~--~d~---DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~-------  205 (383)
                                   ...++.+++||+|+...+  ...   -++-+...+..++|..|.+--..|-++.-..+..       
T Consensus       173 ~~tigt~~Sat~~v~~ndf~~~nlT~en~~gd~~lagn~~AVaL~~dgDka~frnv~llg~QdTlFv~~~~~~~~~~tn~  252 (405)
T COG4677         173 SATIGTLCSATFWVQNNDFQLQNLTIENTLGDGVLAGNHPAVALATDGDKAIFRNVNLLGNQDTLFVGNSGVQNRLETNR  252 (405)
T ss_pred             hhhhhhhhhhhheeecCCcccccceeecccCCccccCCceeEEEEecCCceeeeeeeEeeccceEEecCCCCccccccCc
Confidence                         125789999999996432  112   2444444578899999999988888765433111       


Q ss_pred             --eEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccc
Q 016742          206 --DITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       206 --~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                        .--+-+|.|+.| --+++|+.         .+-||+|-|.-+..|.+-..
T Consensus       253 ~~R~yftNsyI~Gd-vDfIfGsg---------taVFd~c~i~~~d~r~~~~g  294 (405)
T COG4677         253 QPRTYFTNSYIEGD-VDFIFGSG---------TAVFDNCEIQVVDSRTQQEG  294 (405)
T ss_pred             chhhheecceeccc-ceEEeccc---------eEEeccceEEEeccCCCcce
Confidence              123446666533 23555653         35678887877788875543

>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes

Probab=81.49  E-value=19  Score=35.53  Aligned_cols=99  Identities=21%  Similarity=0.304  Sum_probs=51.7

Q ss_pred             EEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec--CCCCc---------eEee---cCCceEEEeCcee
Q 016742          149 RLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD--YDDGL---------IDIT---RESTDITVSRCHF  214 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~--~~Dgl---------idi~---~~s~~VTIS~n~f  214 (383)
                      .+..+++|-|+|+.+.+      |-+.|  .+.||-|||..+..  +.|+.         |+.+   ..+.||||.++.+
T Consensus       113 t~W~c~~i~l~nv~~~g------dYf~m--~s~ni~id~l~~~GnY~Fq~~kNvei~ns~l~sKDAFWn~eNVtVyDS~i  184 (277)
T PF12541_consen  113 TLWNCRGIKLKNVQANG------DYFFM--NSENIYIDNLVLDGNYSFQYCKNVEIHNSKLDSKDAFWNCENVTVYDSVI  184 (277)
T ss_pred             cCEEeCCeEEEeEEEec------eEeee--eccceEEeceEEeCCEEeeceeeEEEEccEEecccccccCCceEEEcceE
Confidence            33456666666666632      33333  25566666665532  11211         1110   2356677777666


Q ss_pred             cCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEcc
Q 016742          215 SSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNW  269 (383)
Q Consensus       215 ~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~  269 (383)
                      ..-+    +|+.       ..++||-+|.+...   .|.+-.-.+.+.|.-+.+.
T Consensus       185 ~GEY----LgW~-------SkNltliNC~I~g~---QpLCY~~~L~l~nC~~~~t  225 (277)
T PF12541_consen  185 NGEY----LGWN-------SKNLTLINCTIEGT---QPLCYCDNLVLENCTMIDT  225 (277)
T ss_pred             eeeE----EEEE-------cCCeEEEEeEEecc---CccEeecceEEeCcEeecc
Confidence            5322    2322       13788888877654   4566544567777766644

Proteins in this family are typically between 281 and 297 amino acids in length.

>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes

Probab=81.11  E-value=4.7  Score=39.63  Aligned_cols=64  Identities=17%  Similarity=0.354  Sum_probs=47.5

Q ss_pred             eeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCCC
Q 016742          152 ECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADP  227 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d  227 (383)
                      +++|..|.|.+|..|..    +  +. .++||-+++|.|.|-+=    +++ ++++.|.+|.|..-..+.+|.+.+
T Consensus        17 ~~~d~~l~~~~f~dGES----~--LK-es~nI~~~~~~F~~KYP----~Wh-~~~~~i~~~~f~~~aRa~iWYs~~   80 (277)
T PF12541_consen   17 GSHDLRLENCTFADGES----P--LK-ESRNIELKNCIFKWKYP----LWH-SDNIKIENCYFTEMARAAIWYSNN   80 (277)
T ss_pred             ccCCCEEEeeEEeCCCc----c--cc-cccceEEECCEEeeECc----eEE-ECCeEEEeeEEeecceeeeeEeCC
Confidence            47899999999997643    3  33 58899999999987432    222 467888888888887888887653

Proteins in this family are typically between 281 and 297 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	383
1pxz_A	346	1.7 Angstrom Crystal Structure Of Jun A 1, The Majo		5e-36
1vbl_A	416	Structure Of The Thermostable Pectate Lyase Pl 47 L		2e-24
3zsc_A	340	Catalytic Function And Substrate Recognition Of The		7e-24
3vmv_A	326	Crystal Structure Of Pectate Lyase Bsp165pela From		1e-20
1bn8_A	420	Bacillus Subtilis Pectate Lyase Length = 420		1e-16
1pcl_A	355	Unusual Structural Features In The Parallel Beta-He		2e-16
2bsp_A	420	Bacillus Subtilis Pectate Lyase R279k Mutant Length		3e-16
3krg_A	399	Structural Insights Into Substrate Specificity And		8e-16
2nzm_A	399	Hexasaccharide I Bound To Bacillus Subtilis Pectate		1e-15
1jrg_A	361	Crystal Structure Of The R3 Form Of Pectate Lyase A		2e-13
1ooc_A	361	Mutations In The T1.5 Loop Of Pectate Lyase A Lengt		2e-13
2qxz_A	330	Pectate Lyase R236f From Xanthomonas Campestris Len		1e-07
2qy1_A	330	Pectate Lyase A31g/r236f From Xanthomonas Campestri		1e-07
2qx3_A	330	Structure Of Pectate Lyase Ii From Xanthomonas Camp		6e-07
1plu_A	353	Pectate Lyase C From Erwinia Chrysanthemi With 1 Lu		3e-05
2ewe_A	353	Crystal Structure Of Pectate Lyase C R218k Mutant I		6e-05

>pdb|1PXZ|A Chain A, 1.7 Angstrom Crystal Structure Of Jun A 1, The Major Allergen From Cedar Pollen Length = 346

Iteration: 1
 Score =  148 bits (374), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 156/311 (50%), Gaps = 34/311 (10%)
Query: 67  LAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTIHL 122
           LA  A GFG   +GG  G  Y VT+  D+     PG+LR G   ++ LWI+F  +  I L
Sbjct: 21  LADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQNMNIKL 80
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVII-------CNLEFEG-------- 165
           +  L V+ +KTIDGRG  V L   G  L +++  HVI+       CN    G        
Sbjct: 81  KMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI 140
Query: 166 GKGP----DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTM 221
           G  P    D DAI ++    + WID  SL D  DGLID+T  ST IT+S  HF +H K M
Sbjct: 141 GVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVM 199
Query: 222 LIGADPSHVADRCIRVTI-HHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDS 280
           L+G D ++  D+ ++VT+  + F     QR PR RY  VH+ NN    W IYA+  S + 
Sbjct: 200 LLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNP 259
Query: 281 QIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCI----RSEGDLFITGTQAGLMTEAG 336
            I S+ N + A  +    K +T++     E+ S C     RS  D FI G       +  
Sbjct: 260 TILSEGNSFTAPSESYK-KEVTKRIG--CESPSACANWVWRSTRDAFINGAYFVSSGKTE 316
Query: 337 EHSMFHPSEYY 347
           E ++++ +E +
Sbjct: 317 ETNIYNSNEAF 327

>pdb|1VBL|A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 Length = 416

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 101/207 (48%), Gaps = 41/207 (19%)
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GG 166
           R  + V S  +I G G+  K+ G G  +K  ++VII N+EFE                G 
Sbjct: 125 RIMVYVGSNTSIIGVGKDAKIKGGGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGE 184
Query: 167 KGPDVDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITV 209
              + D+I I+  S HIWID  +  D D                 DG +DI   S  IT+
Sbjct: 185 WNSEYDSISIE-GSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITI 243
Query: 210 SRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRN 268
           S   F++HDK  LIGA  S +AD   +RVT+HH ++    QR PRVR+ +VH+YNNY   
Sbjct: 244 SYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVRFGQVHIYNNYYEF 303
Query: 269 WGI------YAVCASVDSQIYSQCNIY 289
             +      YA    V SQIY+Q N +
Sbjct: 304 SNLADYDFQYAWGVGVFSQIYAQNNYF 330

>pdb|3ZSC|A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima Length = 340

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 34/243 (13%)
Query: 79  IGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHL--RSHLSVSSYKTIDG 136
           +GGL G +  V T  +    +  EG         V  V GTI    +  + V S KTI G
Sbjct: 22  VGGLGGEIVFVRTAEELEKYTTAEGKY-------VIVVDGTIVFEPKREIKVLSDKTIVG 74
Query: 137 RGQRVKLTGKGLRLKECEHVIICNLEFEG--------GKGPDVDAIQIKPKSKHIWIDRC 188
                K+ G GL +K+ ++VII N+ FEG        GK  D D I ++  S HIWID  
Sbjct: 75  I-NDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE-NSHHIWIDHI 132
Query: 189 SLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGA----DPSHVADRCIRVTIHHCFF 244
           +  + +DG +DI + S  ITVS   F  HDK  L+G+    DP   A +  +VT HH +F
Sbjct: 133 TFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQ-AGQAYKVTYHHNYF 191
Query: 245 DGTRQRHPRVRYAKVHLYNNY----------TRNWGIYAVCASVDSQIYSQCNIYEAGQK 294
               QR PR+R+   H++NN+             + IY V +++ ++++ + N +     
Sbjct: 192 KNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGA 251
Query: 295 KMA 297
            MA
Sbjct: 252 VMA 254

>pdb|3VMV|A Chain A, Crystal Structure Of Pectate Lyase Bsp165pela From Bacillus Sp. N165 Length = 326

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 12/168 (7%)
Query: 133 TIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSL-- 190
           +I G G   +  G G+RL    ++II N+     +  +  AI++   SK++WID      
Sbjct: 82  SIIGVGTNGEFDGIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYS 141
Query: 191 -------RDYDDGLIDITRESTDITVSRCHFSSHDKTMLIG-ADPSHVADRCIRVTIHHC 242
                   DY DGL+D+ R +  ITVS   F +H KTML+G  D + +A    ++T HH 
Sbjct: 142 EFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASLAPD--KITYHHN 199
Query: 243 FFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYE 290
           +F+    R P +RYA VH++NNY ++    A+ + V ++++ + N ++
Sbjct: 200 YFNNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVGARVFVENNYFD 247

>pdb|1BN8|A Chain A, Bacillus Subtilis Pectate Lyase Length = 420

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 53/214 (24%)
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GG 166
           R  + + +  TI G G   K+ G   ++K  ++VII N+EF+                G 
Sbjct: 141 RVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTDGSSGN 199
Query: 167 KGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITV 209
                D I I   + HIWID C+  D                 + DG  D +  +  IT+
Sbjct: 200 WNSQYDNITINGGT-HIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITM 258
Query: 210 SRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY--- 265
           S  ++  HDK+ + G+  S  +D   +++T+HH  +    QR PRVR+ +VH+YNNY   
Sbjct: 259 SYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEG 318
Query: 266 ---------TRNWGIYAVCASVDSQIYSQCNIYE 290
                    +  WGI        S+IY+Q N+ +
Sbjct: 319 STSSSSYPFSYAWGI-----GKSSKIYAQNNVID 347

>pdb|1PCL|A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases Length = 355

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 32/173 (18%)
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNL----------EFEGGKG--PD 170
           RS +S+ S  TI G G   K T   L +K  ++VI+ NL           +E G G   +
Sbjct: 73  RSQISIPSNTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAE 132
Query: 171 VDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVSRCH 213
            DA  I   S ++W+D  ++ D                   DG +DI + S  +T+S   
Sbjct: 133 WDAAVID-NSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSR 191
Query: 214 FSSHDKTMLIGADPSHVADRC--IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 264
           F  HDKT+LIG   S+ +     +RVT H+  FD   +R PRVR+  +H YNN
Sbjct: 192 FELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRFGSIHAYNN 244

>pdb|2BSP|A Chain A, Bacillus Subtilis Pectate Lyase R279k Mutant Length = 420

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 53/214 (24%)
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GG 166
           R  + + +  TI G G   K+ G   ++K  ++VII N+EF+                G 
Sbjct: 141 RVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTDGSSGN 199
Query: 167 KGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITV 209
                D I I   + HIWID C+  D                 + DG  D +  +  IT+
Sbjct: 200 WNSQYDNITINGGT-HIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITM 258
Query: 210 SRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY--- 265
           S  ++  HDK+ + G+  S  +D   +++T+HH  +    Q+ PRVR+ +VH+YNNY   
Sbjct: 259 SYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQKAPRVRFGQVHVYNNYYEG 318
Query: 266 ---------TRNWGIYAVCASVDSQIYSQCNIYE 290
                    +  WGI        S+IY+Q N+ +
Sbjct: 319 STSSSSYPFSYAWGI-----GKSSKIYAQNNVID 347

>pdb|3KRG|A Chain A, Structural Insights Into Substrate Specificity And The Anti Beta-Elimination Mechanism Of Pectate Lyase Length = 399

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 53/214 (24%)
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GG 166
           R  + + +  TI G G   K+ G   ++K  ++VII N+EF+                G 
Sbjct: 120 RVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTAGSSGN 178
Query: 167 KGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITV 209
                D I I   + HIWID C+  D                 + DG  D +  +  IT+
Sbjct: 179 WASQYDNITINGGT-HIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITM 237
Query: 210 SRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY--- 265
           S  ++  HD + + G+  S  +D   +++T+HH  +    QR PRVR+ +VH+YNNY   
Sbjct: 238 SYNYYHDHDASSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEG 297
Query: 266 ---------TRNWGIYAVCASVDSQIYSQCNIYE 290
                    +  WGI        S+IY+Q N+ +
Sbjct: 298 STSSSSYPFSYAWGI-----GKSSKIYAQNNVID 326

>pdb|2NZM|A Chain A, Hexasaccharide I Bound To Bacillus Subtilis Pectate Lyase Length = 399

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 53/214 (24%)
Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GG 166
           R  + + +  TI G G   K+ G   ++K  ++VII N+EF+                G 
Sbjct: 120 RVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTDGSSGN 178
Query: 167 KGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDITV 209
                D I I   + HIWID C+  D                 + DG  D +  +  IT+
Sbjct: 179 WNSQYDNITINGGT-HIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITM 237
Query: 210 SRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNY--- 265
           S  ++  HDK+ + G+  S  +D   +++T+HH  +    Q  PRVR+ +VH+YNNY   
Sbjct: 238 SYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVRFGQVHVYNNYYEG 297
Query: 266 ---------TRNWGIYAVCASVDSQIYSQCNIYE 290
                    +  WGI        S+IY+Q N+ +
Sbjct: 298 STSSSSYPFSYAWGI-----GKSSKIYAQNNVID 326

>pdb|1JRG|A Chain A, Crystal Structure Of The R3 Form Of Pectate Lyase A, Erwinia Chrysanthemi Length = 361

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 54/227 (23%)
Query: 86  LYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHL--------------RSHLSVSSY 131
           +Y VT +++    +L  G   K     + ++ GTI +              RS +++ + 
Sbjct: 35  IYIVTNISE-FTSALSAGAEAK-----IIQIKGTIDISGGTPYTDFADQKARSQINIPAN 88
Query: 132 KTIDGRGQRVKLTGKGLRLKECE---HVIICNL----------EFEGGKG--PDVDAIQI 176
            T+ G G   K     L +   +   +VII N+           +E G G   + DA+ I
Sbjct: 89  TTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNI 148
Query: 177 KPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVSRCHFSSHDK 219
              + H+WID  ++ D +                 DG +DI R S  +T+S      HDK
Sbjct: 149 TNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDK 208
Query: 220 TMLIG-ADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 264
           TMLIG  D +   D+  + VT+ +  F+   +R PRVRY  +H +NN
Sbjct: 209 TMLIGHNDTNSAQDKGKLHVTLFNNVFNRVTERAPRVRYGSIHSFNN 255

>pdb|1OOC|A Chain A, Mutations In The T1.5 Loop Of Pectate Lyase A Length = 361

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 54/227 (23%)
Query: 86  LYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHL--------------RSHLSVSSY 131
           +Y VT +++    +L  G   K     + ++ GTI +              RS +++ + 
Sbjct: 35  IYIVTNISE-FTSALSAGAEAK-----IIQIKGTIDISGGTPYTDFADQKARSQINIPAN 88
Query: 132 KTIDGRGQRVKLTGKGLRLKECE---HVIICNL----------EFEGGKG--PDVDAIQI 176
            T+ G G   K     L +   +   +VII N+           +E G G   + DA+ I
Sbjct: 89  TTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNI 148
Query: 177 KPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVSRCHFSSHDK 219
              + H+WID  ++ D +                 DG +DI R S  +T+S      HDK
Sbjct: 149 TNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDK 208
Query: 220 TMLIG-ADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNN 264
           TMLIG +D +   D+  + VT+ +  F+   +R PRVRY  +H +NN
Sbjct: 209 TMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVRYGSIHSFNN 255

>pdb|2QXZ|A Chain A, Pectate Lyase R236f From Xanthomonas Campestris Length = 330

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 147 GLRLKECEH-VIICNLE---FEGGKGPDVDAIQIKPKSK----HIWID---------RCS 189
           G+R+    H VII N+     +GG+  D D+I ++  S      IW+D         +CS
Sbjct: 87  GIRVVGNAHNVIIQNMTIGLLQGGE--DADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144
Query: 190 -LRDYD-DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGT 247
              D   DG ID+ +    +TVS  +  ++ K  L G   S   +   R T HH  F+  
Sbjct: 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENV 204
Query: 248 RQRHPRVRYAKVHLYNNYTRN 268
             R P  R+   H+YNNY  N
Sbjct: 205 ESRVPLQRFGLSHIYNNYFNN 225

>pdb|2QY1|A Chain A, Pectate Lyase A31g/r236f From Xanthomonas Campestris Length = 330

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 21/141 (14%)
Query: 147 GLRLKECEH-VIICNLE---FEGGKGPDVDAIQIKPKSK----HIWID---------RCS 189
           G+R+    H VII N+     +GG+  D D+I ++  S      IW+D         +CS
Sbjct: 87  GIRVVGNAHNVIIQNMTIGLLQGGE--DADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144
Query: 190 -LRDYD-DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGT 247
              D   DG ID+ +    +TVS  +  ++ K  L G   S   +   R T HH  F+  
Sbjct: 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENV 204
Query: 248 RQRHPRVRYAKVHLYNNYTRN 268
             R P  R+   H+YNNY  N
Sbjct: 205 ESRVPLQRFGLSHIYNNYFNN 225

>pdb|2QX3|A Chain A, Structure Of Pectate Lyase Ii From Xanthomonas Campestris Pv. Campestris Str. Atcc 33913 Length = 330

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 147 GLRLKECEH-VIICNLE---FEGGKGPDVDAIQIKPKSK----HIWID---------RCS 189
           G+R+    H VII N+     +GG+  D D+I ++  S      IW+D         +CS
Sbjct: 87  GIRVVGNAHNVIIQNMTIGLLQGGE--DADSISLEGNSSGEPSKIWVDHNTVFASLTKCS 144
Query: 190 -LRDYD-DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGT 247
              D   DG ID+ +    +TVS  +  ++ K  L G   S   +   R T HH  F+  
Sbjct: 145 GAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENV 204
Query: 248 RQRHPRVRYAKVHLYNNYTRN 268
             R P  R    H+YNNY  N
Sbjct: 205 ESRVPLQRRGLSHIYNNYFNN 225

>pdb|1PLU|A Chain A, Pectate Lyase C From Erwinia Chrysanthemi With 1 Lu+3 Ion In The Putative Calcium Binding Site Length = 353

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 147 GLRLKECEHVIICNLE--FEGGKGPDVDAIQIKPKSKHIWIDRCSL----------RDYD 194
           G+ +K+   V++ N+   +  G   D D I++   S ++W+D   L           D D
Sbjct: 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDND 162
Query: 195 ---DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRH 251
              +  +DI   S  +TVS  +     K   +G D S  +D    +T HH +++    R 
Sbjct: 163 TTFESAVDIKGASNTVTVSYNYIHGVKK---VGLDGSSSSDTGRNITYHHNYYNDVNARL 219
Query: 252 PRVRYAKVHLYNNYTRN 268
           P  R   VH YNN   N
Sbjct: 220 PLQRGGLVHAYNNLYTN 236

>pdb|2EWE|A Chain A, Crystal Structure Of Pectate Lyase C R218k Mutant In Complex With Pentagalacturonic Acid Length = 353

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
Query: 147 GLRLKECEHVIICNLE--FEGGKGPDVDAIQIKPKSKHIWIDRCSL----------RDYD 194
           G+ +K+   V++ N+   +  G   D D I++   S ++W+D   L           D D
Sbjct: 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDND 162
Query: 195 ---DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRH 251
              +  +DI   S  +TVS  +     K   +G D S  +D    +T HH +++    + 
Sbjct: 163 TTFESAVDIKGASNTVTVSYNYIHGVKK---VGLDGSSSSDTGRNITYHHNYYNDVNAKL 219
Query: 252 PRVRYAKVHLYNNYTRN 268
           P  R   VH YNN   N
Sbjct: 220 PLQRGGLVHAYNNLYTN 236

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	383
1pxz_A	346	Major pollen allergen JUN A 1; parallel beta-helix	7e-86
3zsc_A	340	Pectate trisaccharide-lyase; hydrolase; HET: ADA A	2e-84
3vmv_A	326	Pectate lyase; polysaccharide lyase family 1, beta	5e-77
1pcl_A	355	Pectate lyase E; lyase (acting on polysaccharides)	4e-68
1pe9_A	361	Pectate lyase A; parallel beta helix; 1.60A {Erwin	2e-64
2qy1_A	330	Pectate lyase II; GAG lyase; 1.90A {Xanthomonas ca	3e-62
1air_A	353	Pectate lyase C, PELC; pectate cleavage, pectinoly	1e-59
1idk_A	359	Pectin lyase A; signal, glycoprotein, multigene fa	8e-54
1qcx_A	359	Pectin lyase B; beta-helix protein, plant cell WAL	9e-54
1vbl_A	416	Pectate lyase 47; PL 47, thermostable, bacillus su	1e-53
2o04_A	399	Pectate lyase, PL; hexasaccharide compound II, cal	2e-51
3gqn_A	772	Preneck appendage protein; beta helix, beta barrel	6e-06
2uvf_A	608	Exopolygalacturonase; GH28, pectin, cell WALL, hyd	9e-05
1dbg_A	506	Chondroitinase B; beta helix, polysaccharide lyase	2e-04
1bhe_A	376	PEHA, polygalacturonase; family 28 glycosyl hydrol	9e-04

>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1 Length = 346

 Score =  263 bits (673), Expect = 7e-86
 Identities = 104/321 (32%), Positives = 150/321 (46%), Gaps = 28/321 (8%)

Query: 61  DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEV 116
           D +   LA  A GFG   +GG  G  Y VT+  D+     PG+LR G   ++ LWI+F  
Sbjct: 15  DQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQ 74

Query: 117 SGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVIICNLEFEGGK------- 167
           +  I L+  L V+ +KTIDGRG  V L   G  L +++  HVI+ +L   G         
Sbjct: 75  NMNIKLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDV 134

Query: 168 ------------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS 215
                         D DAI ++    + WID  SL D  DGLID+T  ST IT+S  HF 
Sbjct: 135 LVSESIGVEPVHAQDGDAITMRN-VTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFF 193

Query: 216 SHDKTMLIGADPSHVADRCIRVTIHHC-FFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAV 274
           +H K ML+G D ++  D+ ++VT+    F     QR PR RY  VH+ NN    W IYA+
Sbjct: 194 NHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAI 253

Query: 275 CASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKE-EARSGCIRSEGDLFITGTQAGLMT 333
             S +  I S+ N + A  +    +       +      +   RS  D FI G       
Sbjct: 254 GGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSG 313

Query: 334 EAGEHSMFHPSEYYPTWTVAA 354
           +  E ++++ +E +      A
Sbjct: 314 KTEETNIYNSNEAFKVENGNA 334

>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima} Length = 340

 Score =  259 bits (663), Expect = 2e-84
 Identities = 85/333 (25%), Positives = 138/333 (41%), Gaps = 41/333 (12%)

Query: 66  ALAGQAEGFGRL--------AIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVS 117
           +L  +  GF  +         +GGL G +  V T  +     L +    +    IV + +
Sbjct: 1   SLNDKPVGFASVPTADLPEGTVGGLGGEIVFVRTAEE-----LEKYTTAEGKYVIVVDGT 55

Query: 118 GTIHLRSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEG--------GKGP 169
                +  + V S KTI G     K+ G GL +K+ ++VII N+ FEG        GK  
Sbjct: 56  IVFEPKREIKVLSDKTIVGIND-AKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKY 114

Query: 170 DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH 229
           D D I ++  S HIWID  +  + +DG +DI + S  ITVS   F  HDK  L+G+    
Sbjct: 115 DFDYINVE-NSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKE 173

Query: 230 VAD---RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNW----------GIYAVCA 276
             +   +  +VT HH +F    QR PR+R+   H++NN+               IY V +
Sbjct: 174 DPEQAGQAYKVTYHHNYFKNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVAS 233

Query: 277 SVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDL----FITGTQAGLM 332
           ++ ++++ + N +      MA   +    +       G +          F    +  + 
Sbjct: 234 AMGAKVHVEGNYFMGYGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKEPEVR 293

Query: 333 TEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQH 365
                     P EYY  +T+    D  K V+  
Sbjct: 294 PVEEGKPALDPREYYD-YTLDPVQDVPKIVVDG 325

>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A* Length = 326

 Score =  239 bits (612), Expect = 5e-77
 Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 34/300 (11%)

Query: 68  AGQAEGFGRL---AIGGLHGPLYHVTTLAD--DGPGSLREGCRMKEPLWIVFEVSGTIHL 122
           +   +G+  +     GG  G + + +T A       +        EPL I   V+GTI  
Sbjct: 1   SNGPQGYASMNGGTTGGAGGRVEYASTGAQIQQLIDNRSRSNNPDEPLTIY--VNGTITQ 58

Query: 123 RSH-------------LSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGP 169
            +                     +I G G   +  G G+RL    ++II N+     +  
Sbjct: 59  GNSPQSLIDVKNHRGKAHEIKNISIIGVGTNGEFDGIGIRLSNAHNIIIQNVSIHHVREG 118

Query: 170 DVDAIQIKPKSKHIWIDRCSL---------RDYDDGLIDITRESTDITVSRCHFSSHDKT 220
           +  AI++   SK++WID              DY DGL+D+ R +  ITVS   F +H KT
Sbjct: 119 EGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKT 178

Query: 221 MLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDS 280
           ML+G   +       ++T HH +F+    R P +RYA VH++NNY ++    A+ + V +
Sbjct: 179 MLVGHTDNASLAP-DKITYHHNYFNNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVGA 237

Query: 281 QIYSQCNIYEAG----QKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAG 336
           +++ + N ++                          +G     G++F+    + L +   
Sbjct: 238 RVFVENNYFDNVGSGQADPTTGFIKGPVGWFYGSPSTGYWNLRGNVFVNTPNSHLNSTTN 297

>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 Length = 355

 Score =  218 bits (555), Expect = 4e-68
 Identities = 80/362 (22%), Positives = 136/362 (37%), Gaps = 62/362 (17%)

Query: 63  SLRALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHL 122
           +  A  G A   G    G        V  ++D      ++     +    + +V+G I +
Sbjct: 4   TDAATTGWATQNGGTTGGAKAAKAVEVKNISD-----FKKALNGTDSSAKIIKVTGPIDI 58

Query: 123 --------------RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEG--- 165
                         RS +S+ S  TI G G   K T   L +K  ++VI+ NL  E    
Sbjct: 59  SGGKAYTSFDDQKARSQISIPSNTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVD 118

Query: 166 ---------GKGPDVDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLID 199
                    G   + DA  I   S ++W+D  ++ D                   DG +D
Sbjct: 119 VAPHYESGDGWNAEWDAAVI-DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALD 177

Query: 200 ITRESTDITVSRCHFSSHDKTMLIGADPSHVADR--CIRVTIHHCFFDGTRQRHPRVRYA 257
           I + S  +T+S   F  HDKT+LIG   S+ +     +RVT H+  FD   +R PRVR+ 
Sbjct: 178 IKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRFG 237

Query: 258 KVHLYNNYTRN-------WGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEE 310
            +H YNN             +Y+        I S+ N +     K       E +  K+ 
Sbjct: 238 SIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSNLKSIDGKNPECSIVKQ- 296

Query: 311 ARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQ 370
             +  + S+    + G+      +    + + P+  Y  ++    T +L   + +  G+ 
Sbjct: 297 -FNSKVFSDKGSLVNGSTTTK-LDTCGLTAYKPTLPYK-YSAQTMTSSLATSINNNAGYG 353

Query: 371 DI 372
            +
Sbjct: 354 KL 355

>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A Length = 361

 Score =  208 bits (531), Expect = 2e-64
 Identities = 72/347 (20%), Positives = 122/347 (35%), Gaps = 58/347 (16%)

Query: 71  AEGFGRLAIGGLHGPLYHVTTLADD--------GPGSLREGCRMKEPLWIVFEVSGTIHL 122
             GF           +Y VT +++             ++    +       +        
Sbjct: 20  QNGFTTGGAAATSDNIYIVTNISEFTSALSAGAEAKIIQIKGTIDISGGTPYTDFADQKA 79

Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECE---HVIICNLEFE------------GGK 167
           RS +++ +  T+ G G   K     L +   +   +VII N+  +             G 
Sbjct: 80  RSQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGW 139

Query: 168 GPDVDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVS 210
             + DA+ I   + H+WID  ++ D +                 DG +DI R S  +T+S
Sbjct: 140 NAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTIS 199

Query: 211 RCHFSSHDKTMLIGA-DPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRN 268
                 HDKTMLIG  D +   D+  + VT+ +  F+   +R PRVRY  +H +NN  + 
Sbjct: 200 NSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVRYGSIHSFNNVFKG 259

Query: 269 -------WGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGD 321
                     Y+        + S+ N +              KA    +  +G I S+  
Sbjct: 260 DAKDPVYRYQYSFGIGTSGSVLSEGNSFTIA------NLSASKACKVVKKFNGSIFSDNG 313

Query: 322 LFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTG 368
             + G+   L       S +     Y  + V   T  L Q +    G
Sbjct: 314 SVLNGSAVDL--SGCGFSAYTSKIPYI-YDVQPMTTELAQSITDNAG 357

>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A Length = 330

 Score =  202 bits (514), Expect = 3e-62
 Identities = 60/328 (18%), Positives = 100/328 (30%), Gaps = 39/328 (11%)

Query: 71  AEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRS------ 124
             G+G    GG +    +V T                    +V   +G     +      
Sbjct: 2   PVGYGAGTTGGGNKVPVNVATFEAMQSAI----DSYSGSGGLVLNYTGKFDFGTIKDVCA 57

Query: 125 ---------HLSVSSYKTIDGRGQRVKLTGKGLRL-KECEHVIICNLEFEGGKGP-DVDA 173
                     +   S  TI G          G+R+     +VII N+     +G  D D+
Sbjct: 58  QWKLPAKTVQIKNKSDVTIKGAN--GSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADS 115

Query: 174 IQI----KPKSKHIWIDRCSL-----------RDYDDGLIDITRESTDITVSRCHFSSHD 218
           I +      +   IW+D  ++               DG ID+ +    +TVS  +  ++ 
Sbjct: 116 ISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQ 175

Query: 219 KTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASV 278
           K  L G   S   +   R T HH  F+    R P  R+   H+YNNY  N     +   +
Sbjct: 176 KVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRFGLSHIYNNYFNNVTTSGINVRM 235

Query: 279 DSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEH 338
                 + N +E  +  +  +  +E                             T     
Sbjct: 236 GGIAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITWGTPDGSKPYANATNWIST 295

Query: 339 SMFHPSEYYPTWTVAAPTDNLKQVLQHC 366
            +F  S  Y  +TV        +V+   
Sbjct: 296 KVFPESLGY-IYTVTPAAQVKAKVIATA 322

>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A* Length = 353

 Score =  195 bits (497), Expect = 1e-59
 Identities = 52/298 (17%), Positives = 93/298 (31%), Gaps = 47/298 (15%)

Query: 66  ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMK-----EPLWIVFEVSGTI 120
              G A   G    G +      +  + +    +  +    K      PL I +  +   
Sbjct: 3   DTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDS 62

Query: 121 HLRSHLS---------------VSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEG 165
            + +  +                   K I   G        G+ +K+   V++ N+    
Sbjct: 63  LINAAAANICGQWSKDPRGVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGY 122

Query: 166 GKG--PDVDAIQIKPKSKHIWIDRCSLRDYD-------------DGLIDITRESTDITVS 210
             G   D D I++   S ++W+D   L   +             +  +DI   S  +TVS
Sbjct: 123 LPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVS 181

Query: 211 RCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWG 270
             +     K  L G+  S   D    +T HH +++    R P  R   VH YNN   N  
Sbjct: 182 YNYIHGVKKVGLDGSSSS---DTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNIT 238

Query: 271 IYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQ 328
              +    + Q   + N +E     +  +Y  +          G    +G+       
Sbjct: 239 GSGLNVRQNGQALIENNWFEKAINPVTSRYDGKNF--------GTWVLKGNNITKPAD 288

>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A Length = 359

 Score =  181 bits (459), Expect = 8e-54
 Identities = 56/350 (16%), Positives = 104/350 (29%), Gaps = 53/350 (15%)

Query: 66  ALAGQAEGFGRLAIGGLHGPLYHVTT-------LADDGPG-------------------- 98
            ++G AEGF +   GG      +  T       L DD                       
Sbjct: 2   GVSGSAEGFAKGVTGGGSATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSEGTTTGT 61

Query: 99  ---------------SLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKL 143
                             + C   EP      V         ++V+S K++ G G    +
Sbjct: 62  GCAPWGTASACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAI 121

Query: 144 TGKGLRL-KECEHVIICNLEFEGGKGPDV---DAIQIKPKSKHIWIDRCSL-RDYDDGLI 198
            GKGLR+    E++II N+         V   DAI +      +WID  +  R      +
Sbjct: 122 KGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVWIDHVTTARIGRQHYV 180

Query: 199 DITRESTDITVSRCHFSSHDKTMLIGADPSH----VADRCIRVTIHHCFFDGTRQRHPRV 254
             T     ++++  +               +    +      VT+   +   T  R P+V
Sbjct: 181 LGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKV 240

Query: 255 RYAK-VHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARS 313
           +    +H  NNY  +   +A        + ++ N+++     +              A  
Sbjct: 241 QDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGE 300

Query: 314 GCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVL 363
            C    G   +        T + + + F           A+   ++   +
Sbjct: 301 VCSTYLGRDCVINGFGSSGTFSEDSTSFLSDFEGKNIASASAYTSVASRV 350

>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2 Length = 359

 Score =  180 bits (458), Expect = 9e-54
 Identities = 51/317 (16%), Positives = 96/317 (30%), Gaps = 61/317 (19%)

Query: 66  ALAGQAEGFGRLAIGGLHGPLYHVT----------------------------------- 90
            + G AEGF     GG      + T                                   
Sbjct: 2   GVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDQTFDFTGTEGTETTT 61

Query: 91  -----------TLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQ 139
                       +A +              + + ++ +G + +     V+S K+I G+G 
Sbjct: 62  GCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPIT----VNSNKSIVGQGT 117

Query: 140 RVKLTGKGLRL-KECEHVIICNLEFEGGKGPDV---DAIQIKPKSKHIWIDRCSL-RDYD 194
           +  + GKGLR+    ++VII N+         V   DAI +   S  +WID  +  R   
Sbjct: 118 KGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDD-SDLVWIDHVTTARIGR 176

Query: 195 DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVA----DRCIRVTIHHCFFDGTRQR 250
             ++  T     +T+S                  +           VT+   +F     R
Sbjct: 177 QHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGR 236

Query: 251 HPRVRY-AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKE 309
            P+V+    +H  NN   N+  +A        + ++ N+++     +      +  S  +
Sbjct: 237 MPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSPD 296

Query: 310 EARSGCIRSEGDLFITG 326
              +    S        
Sbjct: 297 ANTNQQCASVFGRSCQL 313

>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP} Length = 416

 Score =  182 bits (462), Expect = 1e-53
 Identities = 87/337 (25%), Positives = 132/337 (39%), Gaps = 51/337 (15%)

Query: 68  AGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHL-RSHL 126
               +    +       P +       +   +      ++ PL      S      R  +
Sbjct: 69  LNVDDNNQPVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMV 128

Query: 127 SVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GGKGPD 170
            V S  +I G G+  K+ G G  +K  ++VII N+EFE                G    +
Sbjct: 129 YVGSNTSIIGVGKDAKIKGGGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSE 188

Query: 171 VDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRESTDITVSRCH 213
            D+I I+  S HIWID  +  D D                 DG +DI   S  IT+S   
Sbjct: 189 YDSISIEGSS-HIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNV 247

Query: 214 FSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGI- 271
           F++HDK  LIGA  S +AD   +RVT+HH ++    QR PRVR+ +VH+YNNY     + 
Sbjct: 248 FTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVRFGQVHIYNNYYEFSNLA 307

Query: 272 -----YAVCASVDSQIYSQCNIYEAG---QKKMAFKYLTEKASDKEEARSGCIRSEGDLF 323
                YA    V SQIY+Q N +         +  K  ++      E  +      G  +
Sbjct: 308 DYDFQYAWGVGVFSQIYAQNNYFSFDWDIDPSLIIKVWSKNEESMYETGTIVDLPNGRRY 367

Query: 324 ---ITGTQAGLMTEAGEHSMFHPSEYY---PTWTVAA 354
              +         +  +   + P  Y+   PT +V A
Sbjct: 368 IDLVASYNESNTLQLKKEVTWKPMFYHVIHPTPSVPA 404

>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A* Length = 399

 Score =  176 bits (446), Expect = 2e-51
 Identities = 70/339 (20%), Positives = 114/339 (33%), Gaps = 56/339 (16%)

Query: 69  GQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSV 128
            +  G             Y    L    P +  +                    R  + +
Sbjct: 70  LKPLGLNDYKDPEYDLDKY----LKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDI 125

Query: 129 SSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFE----------------GGKGPDVD 172
            +  TI G G   K+ G   ++K  ++VII N+EF+                G      D
Sbjct: 126 PANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYD 184

Query: 173 AIQIKPKSKHIWIDRCSLR-----------------DYDDGLIDITRESTDITVSRCHFS 215
            I I   + HIWID C+                    + DG  D +  +  IT+S  ++ 
Sbjct: 185 NITINGGT-HIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYH 243

Query: 216 SHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWG---- 270
            HDK+ + G+  S  +D   +++T+HH  +    Q  PRVR+ +VH+YNNY         
Sbjct: 244 DHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVRFGQVHVYNNYYEGSTSSSS 303

Query: 271 ---IYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGT 327
               YA      S+IY+Q N+ +      A                G    +    + GT
Sbjct: 304 YPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVFS--------GGTALYDSGTLLNGT 355

Query: 328 QAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHC 366
           Q       G  S    +      ++ A  +    V+   
Sbjct: 356 QINASAANGLSSSVGWTPSLHG-SIDASANVKSNVINQA 393

>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A* Length = 608

 Score = 43.4 bits (102), Expect = 9e-05
 Identities = 13/110 (11%), Positives = 30/110 (27%), Gaps = 13/110 (11%)

Query: 148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGL---------I 198
           +   E  +V+   L  +     + D I+    S+++ +        DD +          
Sbjct: 357 IMNLENHNVVANGLIHQTYDANNGDGIEFG-NSQNVMVFNNFFDTGDDCINFAAGTGEKA 415

Query: 199 DITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTR 248
                     +   +F      ++ G   SH       +   +     T 
Sbjct: 416 QEQEPMKGAWLFNNYFRMGHGAIVTG---SHTGAWIEDILAENNVMYLTD 462

>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A* Length = 506

 Score = 42.8 bits (99), Expect = 2e-04
 Identities = 24/173 (13%), Positives = 50/173 (28%), Gaps = 22/173 (12%)

Query: 118 GTIHLRSHLSVSSYKTIDG-RGQRVKLTGKGLRLKECEHVIICNLEFEGGKGP-----DV 171
             + + +        TI      +V  TG        EH+I+  + F+ G          
Sbjct: 57  VQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELRGEHLILEGIWFKDGNRAIQAWKSH 116

Query: 172 DAIQIKPKSKHIWIDRCSLRDYDDG--------LIDITRESTDITVSRCHF---SSHDKT 220
               +     +  I  C    +D+         L +  +      +  C F    + D+ 
Sbjct: 117 GPGLVAIYGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQV 176

Query: 221 MLIGADPSHVAD-----RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRN 268
           + +      + D       +   + HCFF   ++        ++  Y N    
Sbjct: 177 INLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGR 229

>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3 Length = 376

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 15/102 (14%)

Query: 153 CEHVIICNLEFEG-GKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDI-----TRESTD 206
            +         +      + D I     SK+I I   ++   DD  + I       E+ +
Sbjct: 182 GDGFTAWKTTIKTPSTARNTDGIDPM-SSKNITIAYSNIATGDDN-VAIKAYKGRAETRN 239

Query: 207 ITVSRCHF-SSHDKTMLIGADPSHVADRCIRVTIHHCFFDGT 247
           I++    F + H   M IG++   V +    VT+     +GT
Sbjct: 240 ISILHNDFGTGH--GMSIGSETMGVYN----VTVDDLKMNGT 275

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	383
1pxz_A	346	Major pollen allergen JUN A 1; parallel beta-helix	100.0
3zsc_A	340	Pectate trisaccharide-lyase; hydrolase; HET: ADA A	100.0
3vmv_A	326	Pectate lyase; polysaccharide lyase family 1, beta	100.0
2qy1_A	330	Pectate lyase II; GAG lyase; 1.90A {Xanthomonas ca	100.0
1pcl_A	355	Pectate lyase E; lyase (acting on polysaccharides)	100.0
1pe9_A	361	Pectate lyase A; parallel beta helix; 1.60A {Erwin	100.0
1vbl_A	416	Pectate lyase 47; PL 47, thermostable, bacillus su	100.0
2o04_A	399	Pectate lyase, PL; hexasaccharide compound II, cal	100.0
1idk_A	359	Pectin lyase A; signal, glycoprotein, multigene fa	100.0
1qcx_A	359	Pectin lyase B; beta-helix protein, plant cell WAL	100.0
1air_A	353	Pectate lyase C, PELC; pectate cleavage, pectinoly	100.0
3gqn_A	772	Preneck appendage protein; beta helix, beta barrel	98.82
3gq8_A	609	Preneck appendage protein; beta helix, viral prote	98.82
2pyg_A	377	Poly(beta-D-mannuronate) C5 epimerase 4; beta-heli	98.8
2iq7_A	339	Endopolygalacturonase; parallel beta helix, hydrol	98.64
1ru4_A	400	Pectate lyase, PEL9A; parallel beta-helix; 1.60A {	98.62
1dbg_A	506	Chondroitinase B; beta helix, polysaccharide lyase	98.58
2inu_A	410	Insulin fructotransferase; right-handed parallel b	98.57
1ia5_A	339	Polygalacturonase; glycosylhydrolase, hydrolase; H	98.56
1nhc_A	336	Polygalacturonase I; beta-helix, hydrolase; HET: M	98.53
1czf_A	362	Polygalacturonase II; beta helix, hydrolase; HET:	98.4
1bhe_A	376	PEHA, polygalacturonase; family 28 glycosyl hydrol	98.4
2uvf_A	608	Exopolygalacturonase; GH28, pectin, cell WALL, hyd	98.34
1rmg_A	422	Rgase A, rhamnogalacturonase A; hydrolase, inverti	98.33
1rmg_A	422	Rgase A, rhamnogalacturonase A; hydrolase, inverti	98.23
3jur_A	448	EXO-poly-alpha-D-galacturonosidase; beta-helix, ce	98.18
1hg8_A	349	Endopolygalacturonase; hydrolase, pectin degradati	98.08
1bhe_A	376	PEHA, polygalacturonase; family 28 glycosyl hydrol	98.04
1qcx_A	359	Pectin lyase B; beta-helix protein, plant cell WAL	98.04
1h80_A	464	IOTA-carrageenase; hydrolase, IOTA-carrageenan dou	97.91
3zsc_A	340	Pectate trisaccharide-lyase; hydrolase; HET: ADA A	97.9
1pxz_A	346	Major pollen allergen JUN A 1; parallel beta-helix	97.83
2uvf_A	608	Exopolygalacturonase; GH28, pectin, cell WALL, hyd	97.81
1k5c_A	335	Endopolygalacturonase; beta helical structure, gly	97.8
1hg8_A	349	Endopolygalacturonase; hydrolase, pectin degradati	97.73
2nsp_A	342	Pectinesterase A; michaelis complex, hydrolase; HE	97.66
3jur_A	448	EXO-poly-alpha-D-galacturonosidase; beta-helix, ce	97.62
1gq8_A	319	Pectinesterase; hydrolase, carboxylic ester hydrol	97.61
1xg2_A	317	Pectinesterase 1; protein-protein complex, beta he	97.57
1ogo_X	574	Dextranase; hydrolase, dextran degradation, glycos	97.56
1k5c_A	335	Endopolygalacturonase; beta helical structure, gly	97.54
1idk_A	359	Pectin lyase A; signal, glycoprotein, multigene fa	97.48
1dbg_A	506	Chondroitinase B; beta helix, polysaccharide lyase	97.33
3uw0_A	364	Pectinesterase; right-handed beta-helix, carbohydr	97.31
3vmv_A	326	Pectate lyase; polysaccharide lyase family 1, beta	97.27
1x0c_A	549	Isopullulanase; glycoside hydrolase family 49, gly	97.22
1ogo_X	574	Dextranase; hydrolase, dextran degradation, glycos	97.19
1ru4_A	400	Pectate lyase, PEL9A; parallel beta-helix; 1.60A {	97.18
3gq8_A	609	Preneck appendage protein; beta helix, viral prote	97.13
1x0c_A	549	Isopullulanase; glycoside hydrolase family 49, gly	97.05
2iq7_A	339	Endopolygalacturonase; parallel beta helix, hydrol	97.04
3gqn_A	772	Preneck appendage protein; beta helix, beta barrel	97.03
1air_A	353	Pectate lyase C, PELC; pectate cleavage, pectinoly	96.94
1pcl_A	355	Pectate lyase E; lyase (acting on polysaccharides)	96.85
1ia5_A	339	Polygalacturonase; glycosylhydrolase, hydrolase; H	96.8
1pe9_A	361	Pectate lyase A; parallel beta helix; 1.60A {Erwin	96.75
2pyg_A	377	Poly(beta-D-mannuronate) C5 epimerase 4; beta-heli	96.65
2qy1_A	330	Pectate lyase II; GAG lyase; 1.90A {Xanthomonas ca	96.61
1nhc_A	336	Polygalacturonase I; beta-helix, hydrolase; HET: M	96.58
1vbl_A	416	Pectate lyase 47; PL 47, thermostable, bacillus su	96.36
2o04_A	399	Pectate lyase, PL; hexasaccharide compound II, cal	96.11
1czf_A	362	Polygalacturonase II; beta helix, hydrolase; HET:	95.96
3grh_A	422	YBHC, acyl-COA thioester hydrolase YBGC; beta-heli	95.84
2x6w_A	600	Tail spike protein; viral protein, beta-helix, hyd	95.71
2inu_A	410	Insulin fructotransferase; right-handed parallel b	95.6
1h80_A	464	IOTA-carrageenase; hydrolase, IOTA-carrageenan dou	95.36
2vbk_A	514	Tailspike-protein; viral adhesion protein, viral p	94.15
3eqn_A	758	Glucan 1,3-beta-glucosidase; tandem beta-helix dom	93.67
2x6w_A	600	Tail spike protein; viral protein, beta-helix, hyd	84.94

>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1

Probab=100.00  E-value=6.4e-71  Score=548.52  Aligned_cols=302  Identities=35%  Similarity=0.529  Sum_probs=258.1

Q ss_pred             cccccccCCCcccccCCCCCCCCCCeEEecCCCCC----CCchHHHhhhcCCCeEEEEEeceEEEecceeEeccCcceee
Q 016742           61 DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDG  136 (383)
Q Consensus        61 ~~~~~a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~----g~GSLr~ai~~~~Pr~IVf~vsG~I~l~~~l~V~snkTI~G  136 (383)
                      ..++++|++||||||++||||+||+||+||+|+|+    +|||||+||++++||||||+++|+|+|+++|.|.|+|||+|
T Consensus        15 ~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~l~~~l~V~sn~TI~G   94 (346)
T 1pxz_A           15 DQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDG   94 (346)
T ss_dssp             TTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCCCTTSCCTTSHHHHHHCSSCEEEEESSCEEECCSSCEECCSSEEEEC
T ss_pred             hhhhhhcccCCccccCCCcCCCCccEEEECChHHcccccCcchhHHHhccCCCeEEEEcCCcEEecCccEEecCCeEEEc
Confidence            34677777899999999999999999999999998    89999999999999999999999999999999999999999


Q ss_pred             eccceEEeC--CcEEEeeeccEEEeeeEEecCC-------------------CCCCCceEecCCCceEEEEceeeecCCC
Q 016742          137 RGQRVKLTG--KGLRLKECEHVIICNLEFEGGK-------------------GPDVDAIQIKPKSKHIWIDRCSLRDYDD  195 (383)
Q Consensus       137 ~G~gi~I~G--~gl~i~~a~NVIIRnL~ir~g~-------------------~~d~DaI~i~~~s~nVwIDHcs~s~~~D  195 (383)
                      +|..++|.|  .+|+|++++|||||||+|+...                   ..+.|||.|+ ++++||||||+|+|+.|
T Consensus        95 ~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~-~s~nVwIDHcs~s~~~D  173 (346)
T 1pxz_A           95 RGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSD  173 (346)
T ss_dssp             TTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSS
T ss_pred             cCCceEEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe-cCceEEEEeeEEecCCC
Confidence            999999997  5899999999999999999752                   2568999998 89999999999999999


Q ss_pred             CceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceee-cCCCCcCCccccCeeEEEcceEEcccccee
Q 016742          196 GLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFF-DGTRQRHPRVRYAKVHLYNNYTRNWGIYAV  274 (383)
Q Consensus       196 glidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f-~~~~~R~Pr~r~G~~hv~NN~~~n~~~~a~  274 (383)
                      |++|+++++++||||||+|++|+|++|||++++...|+.++||||||+| +++.+|+||+|+|++|++||||++|+.|++
T Consensus       174 g~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~g~~hv~NN~~~~~~~~~i  253 (346)
T 1pxz_A          174 GLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAI  253 (346)
T ss_dssp             EEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSEEEEESCEECCCSSCSE
T ss_pred             CcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEecceEEEEeeEEEcccceEE
Confidence            9999999999999999999999999999999877777789999999999 999999999999999999999999999999


Q ss_pred             eecCCceEEEEceEEecCCcc---ceeeeeccccCCccccCcceEEecCCEEEccccccccccCCcccccCCCCCCCccc
Q 016742          275 CASVDSQIYSQCNIYEAGQKK---MAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWT  351 (383)
Q Consensus       275 ~~~~~a~i~~e~Nyf~~g~~~---~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~~~~~~~~~~~~~~~p~~~Y~~yt  351 (383)
                      ++++++++++|+|||+.++.+   .+.+++..  .....+..++|++++++|+||++............|.++  | .|+
T Consensus       254 ~~~~~~~i~~egN~F~~~~~~~~k~v~~~~~~--~~~~~~~~~~~~~~g~~~~nG~~~~~s~~~~~~~~y~~~--~-~~~  328 (346)
T 1pxz_A          254 GGSSNPTILSEGNSFTAPSESYKKEVTKRIGC--ESPSACANWVWRSTRDAFINGAYFVSSGKTEETNIYNSN--E-AFK  328 (346)
T ss_dssp             EEESCCEEEEESCEEECCSCGGGCBSEEECSC--SCHHHHTTSCEEEESCEEETTCBCCCBSCCCCCCCCCTT--T-CCC
T ss_pred             eccCCceEEEECCEEECCCCCcccccEEEecc--CCccccccccEecCCCeEEeceEecCCCCCccCCCCCcc--c-ccc
Confidence            999999999999999998753   22222210  001123456899999999999985321111111123333  4 478


Q ss_pred             cCChHHHHHHHHHhccCCC
Q 016742          352 VAAPTDNLKQVLQHCTGWQ  370 (383)
Q Consensus       352 ~~~A~~a~~~vl~~~AG~q  370 (383)
                      +++|+ +|+++ .++||+.
T Consensus       329 ~~~~~-~v~~~-~~~aG~~  345 (346)
T 1pxz_A          329 VENGN-AAPQL-TKNAGVV  345 (346)
T ss_dssp             CCCGG-GHHHH-TTTCSSC
T ss_pred             cCCHH-HHHHH-hhhccCC
Confidence            99985 78876 6689975

>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}

Probab=100.00  E-value=1.9e-70  Score=542.82  Aligned_cols=293  Identities=28%  Similarity=0.446  Sum_probs=251.0

Q ss_pred             ccccC-CCcccccCCCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec--ceeEeccCcceeeeccc
Q 016742           64 LRALA-GQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR--SHLSVSSYKTIDGRGQR  140 (383)
Q Consensus        64 ~~a~~-~~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~--~~l~V~snkTI~G~G~g  140 (383)
                      ...|| -.|||||++||||+||++|+||||+|     ||+||++++||||+  |+|+|+++  .+|.|.|||||+|+|..
T Consensus         6 ~~G~As~~AeG~g~~ttGG~gG~v~~VTtl~d-----Lr~al~~~~PriIv--v~G~I~~~~~~~l~v~snkTI~G~ga~   78 (340)
T 3zsc_A            6 PVGFASVPTADLPEGTVGGLGGEIVFVRTAEE-----LEKYTTAEGKYVIV--VDGTIVFEPKREIKVLSDKTIVGINDA   78 (340)
T ss_dssp             CCSGGGCCCSSCTTSCCTTTTSEEEEECSHHH-----HHHHHTSSSCEEEE--EEEEEEEEEEEEEEECSSEEEEEEEEE
T ss_pred             CceeecccccccCCCCccCCCceEEEeCCHHH-----HHHHHhCCCCEEEE--ECcEEEeCCcceEEecCCCEEEeccCc
Confidence            34455 25999999999999999999999999     99999999999998  57999998  89999999999999877


Q ss_pred             eEEeCCcEEEeeeccEEEeeeEEecCCC--------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCc
Q 016742          141 VKLTGKGLRLKECEHVIICNLEFEGGKG--------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRC  212 (383)
Q Consensus       141 i~I~G~gl~i~~a~NVIIRnL~ir~g~~--------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n  212 (383)
                       +|.|.+|+|++++|||||||+||.+..        .+.|+|+|+ +++|||||||+|+|+.||+||+++++++||||||
T Consensus        79 -~I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn  156 (340)
T 3zsc_A           79 -KIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWN  156 (340)
T ss_dssp             -EEEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEEEETTCEEEEEESC
T ss_pred             -EEecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceEEecCCceEEEECc
Confidence             999999999999999999999998741        278999998 7999999999999999999999989999999999


Q ss_pred             eecCCCceeEecCCCCCC--CC-cceeEEEeceeecCCCCcCCccccCeeEEEcceEEc----------cccceeeecCC
Q 016742          213 HFSSHDKTMLIGADPSHV--AD-RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRN----------WGIYAVCASVD  279 (383)
Q Consensus       213 ~f~~H~k~~LiG~~d~~~--~d-~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n----------~~~~a~~~~~~  279 (383)
                      +|++|+|+||+|+++...  .| +.++||||||||+++.+|+||+|+|++|++||||++          |..|+++++++
T Consensus       157 ~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~  236 (340)
T 3zsc_A          157 KFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMG  236 (340)
T ss_dssp             EEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEESSEEEEESCEEECCCCCSCSSCCSCCEEEEEETT
T ss_pred             EeccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccCCeEEEEccEEECCccccccccceeeeeEecCCC
Confidence            999999999999987652  34 348999999999999999999999999999999999          99999999999


Q ss_pred             ceEEEEceEEecCCc-----cceeeeeccccCCccccCcceEEecC----CEEEccccccccccCCcccccCCCCCCCcc
Q 016742          280 SQIYSQCNIYEAGQK-----KMAFKYLTEKASDKEEARSGCIRSEG----DLFITGTQAGLMTEAGEHSMFHPSEYYPTW  350 (383)
Q Consensus       280 a~i~~e~Nyf~~g~~-----~~~~~~~~~~~~~~~~~~~g~~~~~g----n~~~nG~~~~~~~~~~~~~~~~p~~~Y~~y  350 (383)
                      +++++|+|||++...     ..++.+.+.     ..+..|||...+    |.|.++.............+|.|.++| .|
T Consensus       237 a~i~~E~N~F~~~~~~~~~~~~~~p~~~~-----~~~~~G~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~pY-~Y  310 (340)
T 3zsc_A          237 AKVHVEGNYFMGYGAVMAEAGIAFLPTRI-----MGPVEGYLTLGEGDAKNEFYYCKEPEVRPVEEGKPALDPREYY-DY  310 (340)
T ss_dssp             CEEEEESCEEECSCHHHHHTTCCBEEEEE-----CTTTBCEEEECCGGGCCEEESBCCCCCBCSSTTSCSCCGGGTC-CC
T ss_pred             CEEEEECcEEECCCccccccccccccccc-----CCCCceEEEecCcccceeeccCCCCccccccCCccccccCCCc-ee
Confidence            999999999999866     111112111     125689999998    899876432211111233567777788 49


Q ss_pred             ccCChHHHHHHHHHhccCCCCC
Q 016742          351 TVAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       351 t~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      ++++| +.|+++|+..||+++.
T Consensus       311 ~l~~a-~~v~~~V~~~AG~gk~  331 (340)
T 3zsc_A          311 TLDPV-QDVPKIVVDGAGAGKL  331 (340)
T ss_dssp             CCCCG-GGHHHHHHHHCSTTCC
T ss_pred             ecCcH-HHhhHHHhhcCCCCee
Confidence            99998 4899999999999985

>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*

Probab=100.00  E-value=1.1e-69  Score=535.06  Aligned_cols=287  Identities=27%  Similarity=0.440  Sum_probs=245.9

Q ss_pred             CcccccC---CCCCCCCCCeEEecCCCCCCCchHHHhhh-------cCCCeEEEEEeceEEEec----ceeEec------
Q 016742           70 QAEGFGR---LAIGGLHGPLYHVTTLADDGPGSLREGCR-------MKEPLWIVFEVSGTIHLR----SHLSVS------  129 (383)
Q Consensus        70 ~aeGfg~---~ttGG~gG~v~~VTnl~d~g~GSLr~ai~-------~~~Pr~IVf~vsG~I~l~----~~l~V~------  129 (383)
                      +|+|||+   +||||+||+||+||||+|     ||+||+       +++||+|+  |+|+|+|+    ++|.|+      
T Consensus         3 ~~~Gfa~~nggTtGG~gG~vv~Vttl~d-----L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~~~~~~~   75 (326)
T 3vmv_A            3 GPQGYASMNGGTTGGAGGRVEYASTGAQ-----IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVKNHRGKA   75 (326)
T ss_dssp             CCSGGGGSTTCCCTTTTSEEEEESSHHH-----HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEESCTTCTT
T ss_pred             CCceeeecCCCCccCCCCeEEEECCHHH-----HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEecccccc
Confidence            5899999   599999999999999999     999999       88999887  99999998    789998      


Q ss_pred             ---cCcceeeeccceEEeCCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecC---------CCCc
Q 016742          130 ---SYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDY---------DDGL  197 (383)
Q Consensus       130 ---snkTI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~---------~Dgl  197 (383)
                         |||||+|+|.+++|.|.+|+|++++|||||||+|+.+...+.|+|+|+..++|||||||+|+|+         .||+
T Consensus        76 ~~~sn~TI~G~g~~~~i~G~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl  155 (326)
T 3vmv_A           76 HEIKNISIIGVGTNGEFDGIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGL  155 (326)
T ss_dssp             SCEEEEEEEECTTCCEEESCCEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCS
T ss_pred             cCCCCeEEEecCCCeEEeCcEEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcc
Confidence               9999999999999999999999999999999999998877899999983389999999999975         4999


Q ss_pred             eEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEccccceeeec
Q 016742          198 IDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCAS  277 (383)
Q Consensus       198 idi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~a~~~~  277 (383)
                      +|+++++++||||||+|++|+|+||||++|+... ...+||||||||+++.+|+||+|+|++|++||||++|..|+++++
T Consensus       156 ~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~-~~~~vT~~~N~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~  234 (326)
T 3vmv_A          156 VDMKRNAEYITVSWNKFENHWKTMLVGHTDNASL-APDKITYHHNYFNNLNSRVPLIRYADVHMFNNYFKDINDTAINSR  234 (326)
T ss_dssp             EEECTTCEEEEEESCEEEEEEECEEECSSSCGGG-CCEEEEEESCEEEEEEECTTEEESCEEEEESCEEEEESSCSEEEE
T ss_pred             eEecCCCceEEEEceEEecCceEEEECCCCCCcc-cCccEEEEeeEecCCcCcCCcccCCcEEEEccEEECCCceEEeec
Confidence            9999999999999999999999999999875432 135999999999999999999999999999999999999999999


Q ss_pred             CCceEEEEceEEecCCccce---eeeeccc-cCCccccCcceEEecCCEEEccccccccccCCcccccCCCCCCCccccC
Q 016742          278 VDSQIYSQCNIYEAGQKKMA---FKYLTEK-ASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA  353 (383)
Q Consensus       278 ~~a~i~~e~Nyf~~g~~~~~---~~~~~~~-~~~~~~~~~g~~~~~gn~~~nG~~~~~~~~~~~~~~~~p~~~Y~~yt~~  353 (383)
                      +++++++|+|||+++....+   ...+..+ ....+++..|+|...++.|+++....    ..+...|+|+  | .|+++
T Consensus       235 ~~a~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~n~~~n~~~~~----~~~~~~~~p~--Y-~y~l~  307 (326)
T 3vmv_A          235 VGARVFVENNYFDNVGSGQADPTTGFIKGPVGWFYGSPSTGYWNLRGNVFVNTPNSH----LNSTTNFTPP--Y-SYQVQ  307 (326)
T ss_dssp             TTCEEEEESCEEEEESCCSBCTTTCCBCSSEECCSCSSSBCEEEEESCEEESSCCTT----CCCCCCCCCS--S-CCCCC
T ss_pred             CCcEEEEEceEEECCcCccccccccccccceeeccCCCCceEEEEECCeEccCcCcc----cCCCcccccc--C-eeecC
Confidence            99999999999999821000   0000000 00112457899999999999863321    2355688887  6 48999


Q ss_pred             ChHHHHHHHHHhccCCCCC
Q 016742          354 APTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       354 ~A~~a~~~vl~~~AG~q~~  372 (383)
                      +|+ +||++|...||++++
T Consensus       308 ~a~-~V~~~V~~~AG~Gk~  325 (326)
T 3vmv_A          308 SAT-QAKSSVEQHSGVGVI  325 (326)
T ss_dssp             CHH-HHHHHHHHHCSSSSC
T ss_pred             CHH-HhhHHHhccCCCccc
Confidence            984 899999999999874

>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A

Probab=100.00  E-value=1.9e-67  Score=520.66  Aligned_cols=282  Identities=22%  Similarity=0.289  Sum_probs=241.7

Q ss_pred             CcccccCCCCCCCCCCeEEecCCCCCCCchHHHhhhc---CCCeEEEEEeceEEEecc---------------eeEeccC
Q 016742           70 QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRM---KEPLWIVFEVSGTIHLRS---------------HLSVSSY  131 (383)
Q Consensus        70 ~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~---~~Pr~IVf~vsG~I~l~~---------------~l~V~sn  131 (383)
                      +|||||++||||++|++|+||||+|     ||+||++   ++||||+|  +|+|++++               +|+|.||
T Consensus         1 ga~Gfa~~ttGG~gg~~~~Vtt~~~-----L~~al~~~~~~~p~iI~~--~G~i~~~~~~~~c~~~~~~~~~~~l~v~sn   73 (330)
T 2qy1_A            1 GPVGYGAGTTGGGNKVPVNVATFEA-----MQSAIDSYSGSGGLVLNY--TGKFDFGTIKDVCAQWKLPAKTVQIKNKSD   73 (330)
T ss_dssp             CCCSTTTTCCTTTTSCCEEECSHHH-----HHHHHHHSCSSSCEEEEE--CCBCCGGGCCCGGGSTTSCCCEEEEESCCS
T ss_pred             CCceeecCCCCCCCceEEEcCCHHH-----HHHHHhccCCCCCEEEEE--ccEEecccccccccccccccceeEEEcCCC
Confidence            5899999999999999999999997     9999985   89999996  79999985               7888999


Q ss_pred             cceeeeccceEEeCCcEEEe-eeccEEEeeeEEecCCC-CCCCceEecC----CCceEEEEceeeecCC-----------
Q 016742          132 KTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFEGGKG-PDVDAIQIKP----KSKHIWIDRCSLRDYD-----------  194 (383)
Q Consensus       132 kTI~G~G~gi~I~G~gl~i~-~a~NVIIRnL~ir~g~~-~d~DaI~i~~----~s~nVwIDHcs~s~~~-----------  194 (383)
                      |||+|+  +++|.|.+|+|+ +++|||||||+|+.+.. +++|+|+|++    .++|||||||+|+|..           
T Consensus        74 ~TI~G~--~a~i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~  151 (330)
T 2qy1_A           74 VTIKGA--NGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASF  151 (330)
T ss_dssp             EEEEEC--TTCBBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSS
T ss_pred             eEEECC--CcEEeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCccee
Confidence            999886  467899999998 89999999999998764 4789999984    5999999999999976           


Q ss_pred             CCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEcccccee
Q 016742          195 DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAV  274 (383)
Q Consensus       195 Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~a~  274 (383)
                      ||+||+++++++||||||+|.+|+|+||||++|+...|+.++||||||||+++.+|+||+|+|++|++||||++|..|++
T Consensus       152 Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~~i  231 (330)
T 2qy1_A          152 DGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRFGLSHIYNNYFNNVTTSGI  231 (330)
T ss_dssp             CCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEESSEEEEESCEEEEECSCSE
T ss_pred             ecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCceecceEEEEeeEEEcccceEe
Confidence            99999999999999999999999999999999877666678999999999999999999999999999999999999999


Q ss_pred             eecCCceEEEEceEEecCCccceeeeeccccCCccccCcceEEecCCEEEc--cccccccc--------cCCcccccCCC
Q 016742          275 CASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFIT--GTQAGLMT--------EAGEHSMFHPS  344 (383)
Q Consensus       275 ~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~n--G~~~~~~~--------~~~~~~~~~p~  344 (383)
                      ++++++++++|+|||++++.+...+         +....|+|..++| |++  +.......        ...+...|.|+
T Consensus       232 ~~~~~~~i~~e~N~F~~~~~p~~~~---------~~~~~g~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (330)
T 2qy1_A          232 NVRMGGIAKIESNYFENIKNPVTSR---------DSSEIGYWDLINN-YVGSGITWGTPDGSKPYANATNWISTKVFPES  301 (330)
T ss_dssp             EEETTCEEEEESCEEEEEESSEEEC---------SSSSBCEEEEESC-EECSCEECCCCSSSSCCEECTTCCCSSCCCSC
T ss_pred             ccCCCcEEEEEccEEECCCCceeec---------cCCCceeEEEeCC-cccccccccccCcccccccccccCcccccccC
Confidence            9999999999999999986653321         1235688888888 887  32211000        01123467766


Q ss_pred             CCCCccccCChHHHHHHHHHhccCCCCC
Q 016742          345 EYYPTWTVAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       345 ~~Y~~yt~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      ++|+ |++++|+ +|+++|.+.||+++.
T Consensus       302 ~~Y~-y~~~~a~-~V~~~V~~~AGag~~  327 (330)
T 2qy1_A          302 LGYI-YTVTPAA-QVKAKVIATAGAGKN  327 (330)
T ss_dssp             CCSC-CCCCCGG-GHHHHHHHHCSTTST
T ss_pred             CCce-eeeCCHH-HHHHhhHhccCCCcc
Confidence            7784 9999995 789999999999873

>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1

Probab=100.00  E-value=2.5e-64  Score=502.49  Aligned_cols=292  Identities=25%  Similarity=0.404  Sum_probs=232.7

Q ss_pred             CCCcccccC---CCCCCCCCC-eEEecCCCCCCCchHHHhh--hcCCCeEEEEEeceEEEecc--------------eeE
Q 016742           68 AGQAEGFGR---LAIGGLHGP-LYHVTTLADDGPGSLREGC--RMKEPLWIVFEVSGTIHLRS--------------HLS  127 (383)
Q Consensus        68 ~~~aeGfg~---~ttGG~gG~-v~~VTnl~d~g~GSLr~ai--~~~~Pr~IVf~vsG~I~l~~--------------~l~  127 (383)
                      ..+++|||+   +||||++|+ +|+||||+|     ||+||  +.++||+  |.|+|+|++..              +|+
T Consensus         5 ~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~-----L~~al~~~~~~p~V--I~V~GtI~~~~~~~~~s~~~~~~~~~l~   77 (355)
T 1pcl_A            5 DAATTGWATQNGGTTGGAKAAKAVEVKNISD-----FKKALNGTDSSAKI--IKVTGPIDISGGKAYTSFDDQKARSQIS   77 (355)
T ss_pred             ccCCcceeecCCCCccCCCCceEEEeCCHHH-----HHHHHhhCCCCcEE--EEECCEEecCCccccccccccccceeEE
Confidence            356899998   799999998 799999999     99999  7889984  55999999974              688


Q ss_pred             eccCcceeeeccceEEeCCcEEEeeeccEEEeeeEEecCC------------CCCCCceEecCCCceEEEEceeeecC--
Q 016742          128 VSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGK------------GPDVDAIQIKPKSKHIWIDRCSLRDY--  193 (383)
Q Consensus       128 V~snkTI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~------------~~d~DaI~i~~~s~nVwIDHcs~s~~--  193 (383)
                      |.|||||+|+|.+++|.|.+|+|++++|||||||+|+.+.            ..+.|+|.|+ +++|||||||+|+|+  
T Consensus        78 v~sn~TI~G~G~~~~i~g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~-~s~nVWIDH~s~s~~~~  156 (355)
T 1pcl_A           78 IPSNTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVID-NSTNVWVDHVTISDGSF  156 (355)
T ss_pred             eCCCeEEEEecCCeEEecCEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEec-CCCcEEEEeeEEecccc
Confidence            8999999999999999999999999999999999999752            1458999997 899999999999996  


Q ss_pred             ---------------CCCceEeecCCceEEEeCceecCCCceeEecCCCCCC-CC-cceeEEEeceeecCCCCcCCcccc
Q 016742          194 ---------------DDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHV-AD-RCIRVTIHHCFFDGTRQRHPRVRY  256 (383)
Q Consensus       194 ---------------~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~-~d-~~~~VT~hhN~f~~~~~R~Pr~r~  256 (383)
                                     .||+||+++++++||||||+|.+|+|+||||++|+.. .| +.++||||||||+++.+|+||+|+
T Consensus       157 ~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR~  236 (355)
T 1pcl_A          157 TDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRF  236 (355)
T ss_pred             CccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCceec
Confidence                           6999999999999999999999999999999998654 56 458999999999999999999999


Q ss_pred             CeeEEEcceEEcc---c----cceeeecCCceEEEEceEEecCCccceeeeeccccCCccccCcceEEecCCEEEccccc
Q 016742          257 AKVHLYNNYTRNW---G----IYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQA  329 (383)
Q Consensus       257 G~~hv~NN~~~n~---~----~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~~  329 (383)
                      |++|++||||+++   +    .|++++++++++++|+|||+++..+.+.... . .....+...|....+.+.+++|...
T Consensus       237 G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~gn~~~g~~~  314 (355)
T 1pcl_A          237 GSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSNLKSIDGKN-P-ECSIVKQFNSKVFSDKGSLVNGSTT  314 (355)
T ss_pred             ceEEEEcceEEcccCCCccccceEecCCCCcEEEEEccEEECCCcccccccc-c-cccccccccCceEEecCccccCcCc
Confidence            9999999999754   4    5888889999999999999998432221110 0 0000011122211334446666543


Q ss_pred             cccccCCcccccCCCCCCCccccCChHHHHHHHHHhccCCCC
Q 016742          330 GLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQD  371 (383)
Q Consensus       330 ~~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~  371 (383)
                      .... ......|.+..+| .|+++.+.++|+++|..+||+.+
T Consensus       315 ~~~~-~~~~~~~~~~~~y-~y~~~~~a~~v~~~V~~~AGag~  354 (355)
T 1pcl_A          315 TKLD-TCGLTAYKPTLPY-KYSAQTMTSSLATSINNNAGYGK  354 (355)
T ss_pred             cccc-cCCccccccCCCC-CccCCCcHHHHHHHHHhccCCCC
Confidence            1111 1122466666567 48765544689999999999976

>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A

Probab=100.00  E-value=8e-65  Score=506.74  Aligned_cols=282  Identities=26%  Similarity=0.435  Sum_probs=231.2

Q ss_pred             CcccccC---CCCCCCCC---CeEEecCCCCCCCchHHHhh-hcCCCeEEEEEeceEEEecc--------------eeEe
Q 016742           70 QAEGFGR---LAIGGLHG---PLYHVTTLADDGPGSLREGC-RMKEPLWIVFEVSGTIHLRS--------------HLSV  128 (383)
Q Consensus        70 ~aeGfg~---~ttGG~gG---~v~~VTnl~d~g~GSLr~ai-~~~~Pr~IVf~vsG~I~l~~--------------~l~V  128 (383)
                      +++|||+   +||||++|   +||+||||+|     ||+|| ++++||+|+  |+|+|++..              +|+|
T Consensus        13 ~~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d-----L~~al~~~~~p~vI~--V~GtI~~~~~~~~~s~~~~~~~~~l~v   85 (361)
T 1pe9_A           13 PTVGWASQNGFTTGGAAATSDNIYIVTNISE-----FTSALSAGAEAKIIQ--IKGTIDISGGTPYTDFADQKARSQINI   85 (361)
T ss_dssp             CSSSGGGSSSCCCTTTTCCGGGEEEECSHHH-----HHHHHTTTTSCEEEE--ECSEEETTTTCCCCSHHHHHHHSEEEC
T ss_pred             CCCceeecCCCCcCCCCCccccEEEeCCHHH-----HHHHHhcCCCcEEEE--ECCEEecCCccccccccccccceeEEe
Confidence            4899995   89999998   7899999999     99999 899999664  899999974              7889


Q ss_pred             ccCcceeeeccceEEeCCcEEE---eeeccEEEeeeEEecCCC------------CCCCceEecCC-CceEEEEceeeec
Q 016742          129 SSYKTIDGRGQRVKLTGKGLRL---KECEHVIICNLEFEGGKG------------PDVDAIQIKPK-SKHIWIDRCSLRD  192 (383)
Q Consensus       129 ~snkTI~G~G~gi~I~G~gl~i---~~a~NVIIRnL~ir~g~~------------~d~DaI~i~~~-s~nVwIDHcs~s~  192 (383)
                      .|||||+|+|.+++|.|.+|+|   ++++|||||||+|+.+..            .++|+|+|+ + ++|||||||+|+|
T Consensus        86 ~snkTI~G~G~~~~i~g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~-~~s~nVWIDHcs~s~  164 (361)
T 1pe9_A           86 PANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNIT-NGAHHVWIDHVTISD  164 (361)
T ss_dssp             CSSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEE-TTCEEEEEESCEEEC
T ss_pred             cCCcEEEccCCCeEEecCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEee-cCCceEEEEccEeec
Confidence            9999999999999999999999   789999999999997531            458999998 6 9999999999999


Q ss_pred             C-----------------CCCceEeecCCceEEEeCceecCCCceeEecCCCCCC-CC-cceeEEEeceeecCCCCcCCc
Q 016742          193 Y-----------------DDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHV-AD-RCIRVTIHHCFFDGTRQRHPR  253 (383)
Q Consensus       193 ~-----------------~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~-~d-~~~~VT~hhN~f~~~~~R~Pr  253 (383)
                      +                 .||+||+++++++||||||+|.+|+|+||||++|+.. .| +.++||||||||+++.+|+||
T Consensus       165 ~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr  244 (361)
T 1pe9_A          165 GNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPR  244 (361)
T ss_dssp             TTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSE
T ss_pred             ccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCcc
Confidence            6                 6999999999999999999999999999999998654 44 458999999999999999999


Q ss_pred             cccCeeEEEcceEEc---cc----cceeeecCCceEEEEceEEecCCccc--eeeeeccccCCccccCcc-eEEecCCEE
Q 016742          254 VRYAKVHLYNNYTRN---WG----IYAVCASVDSQIYSQCNIYEAGQKKM--AFKYLTEKASDKEEARSG-CIRSEGDLF  323 (383)
Q Consensus       254 ~r~G~~hv~NN~~~n---~~----~~a~~~~~~a~i~~e~Nyf~~g~~~~--~~~~~~~~~~~~~~~~~g-~~~~~gn~~  323 (383)
                      +|+|++|+|||||++   |+    .|++++++++++++|+|||++++.+.  ....+        ....| .+...++ +
T Consensus       245 ~R~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~--------~~~~~~~~~~~gn-~  315 (361)
T 1pe9_A          245 VRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKACKVV--------KKFNGSIFSDNGS-V  315 (361)
T ss_dssp             ESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGGGGGE--------EESSCCEEEEESC-E
T ss_pred             cccceEEEEcceEecccCCCccccceEecCCCCcEEEEECCEEECCCCccccCceeE--------EecCCcEEEecCc-c
Confidence            999999999999975   44    68999999999999999999984320  00001        01122 2344555 4


Q ss_pred             EccccccccccCCcccccCCCCCCCccccCChHHHHHHHHHhccCCCC
Q 016742          324 ITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQD  371 (383)
Q Consensus       324 ~nG~~~~~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~  371 (383)
                      ++|+......  .....|.|..+| .|+++.+.++|+++|.++||+.+
T Consensus       316 ~~g~~~~~~~--~g~~~~~~~~~y-~y~~~~~a~~V~~~V~~~AGag~  360 (361)
T 1pe9_A          316 LNGSAVDLSG--CGFSAYTSKIPY-IYDVQPMTTELAQSITDNAGSGK  360 (361)
T ss_dssp             ETTEECCCTT--SSCBCCCSCCCS-CCCCCCCCHHHHHHHHHHCSTTC
T ss_pred             ccCcCcccCC--CCccccccCCCC-ccccCCcHHHHHHHHHhccCCCc
Confidence            5665432211  122467777677 48665433689999999999976

>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}

Probab=100.00  E-value=1.3e-63  Score=505.78  Aligned_cols=290  Identities=32%  Similarity=0.491  Sum_probs=237.3

Q ss_pred             ccccccCCCcccccC---CCCCCCCCC---eEEecCCCCCCCchHHHhhhcC--------CCeEEEEEeceEEEecc---
Q 016742           62 CSLRALAGQAEGFGR---LAIGGLHGP---LYHVTTLADDGPGSLREGCRMK--------EPLWIVFEVSGTIHLRS---  124 (383)
Q Consensus        62 ~~~~a~~~~aeGfg~---~ttGG~gG~---v~~VTnl~d~g~GSLr~ai~~~--------~Pr~IVf~vsG~I~l~~---  124 (383)
                      -.+++|+ +|+|||+   +||||++|+   ||+|||++|     |++||++.        +||+|+  |+|+|++..   
T Consensus         3 ~~~~~~~-~~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae-----L~~al~~~~~~~~~~~~priI~--V~GtId~~~~~~   74 (416)
T 1vbl_A            3 LGHEVLK-PYDGWAAYGEGTTGGAMASPQNVFVVTNRTE-----LIQALGGNNHTNQYNSVPKIIY--VKGTIDLNVDDN   74 (416)
T ss_dssp             GGGCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH-----HHHHTTSCTTGGGGCCSCEEEE--ECSEEESSBCTT
T ss_pred             ccccccC-CCcceeecCCCCcCCCCCccccEEEeCCHHH-----HHHHHhccccccccCCCCEEEE--ECCEEecccCCC
Confidence            4456777 5999999   999999996   899999999     99999864        899887  889999852   


Q ss_pred             ----------------------------------------------------eeEeccCcceeeeccceEEeCCcEEEee
Q 016742          125 ----------------------------------------------------HLSVSSYKTIDGRGQRVKLTGKGLRLKE  152 (383)
Q Consensus       125 ----------------------------------------------------~l~V~snkTI~G~G~gi~I~G~gl~i~~  152 (383)
                                                                          +|.|.|||||+|+|.+++|.|.+|+|++
T Consensus        75 g~~~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~  154 (416)
T 1vbl_A           75 NQPVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIKGGGFLIKN  154 (416)
T ss_dssp             SCBCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEESCEEEEES
T ss_pred             CccccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEecCEEEeec
Confidence                                                                5788999999999999999999999999


Q ss_pred             eccEEEeeeEEecCC----------------CCCCCceEecCCCceEEEEceeeecC-----------------CCCceE
Q 016742          153 CEHVIICNLEFEGGK----------------GPDVDAIQIKPKSKHIWIDRCSLRDY-----------------DDGLID  199 (383)
Q Consensus       153 a~NVIIRnL~ir~g~----------------~~d~DaI~i~~~s~nVwIDHcs~s~~-----------------~Dglid  199 (383)
                      ++|||||||+|+.+.                ..+.|+|+|+ +++|||||||+|+|+                 .||+||
T Consensus       155 ~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~D  233 (416)
T 1vbl_A          155 VDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIE-GSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALD  233 (416)
T ss_dssp             CEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEE-SCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEE
T ss_pred             CceEEEeCeEEEcCccccccccccccccccccCCCceEEec-CCceEEEEccEEecCCCcccccccccCcceeeccccee
Confidence            999999999999753                1357999997 799999999999996                 599999


Q ss_pred             eecCCceEEEeCceecCCCceeEecCCCCCCCCc-ceeEEEeceeecCCCCcCCccccCeeEEEcceEEccc------cc
Q 016742          200 ITRESTDITVSRCHFSSHDKTMLIGADPSHVADR-CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWG------IY  272 (383)
Q Consensus       200 i~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~-~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~------~~  272 (383)
                      +++++++||||||+|.+|+|+||||++|+...|+ .++||||||||+++.+|+||+|+|++|+|||||+++.      .|
T Consensus       234 i~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~y  313 (416)
T 1vbl_A          234 IKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVRFGQVHIYNNYYEFSNLADYDFQY  313 (416)
T ss_dssp             EESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEESSCEEEEESCEEEECTTSSSCCCC
T ss_pred             eecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccccceEEEEcceEECCCCCccccee
Confidence            9999999999999999999999999998776665 4899999999999999999999999999999999753      38


Q ss_pred             eeeecCCceEEEEceEEecCCcc---ceeeeeccccCCccccCcceEEecCCEEE--cc-ccccc-------cc-cCCcc
Q 016742          273 AVCASVDSQIYSQCNIYEAGQKK---MAFKYLTEKASDKEEARSGCIRSEGDLFI--TG-TQAGL-------MT-EAGEH  338 (383)
Q Consensus       273 a~~~~~~a~i~~e~Nyf~~g~~~---~~~~~~~~~~~~~~~~~~g~~~~~gn~~~--nG-~~~~~-------~~-~~~~~  338 (383)
                      ++++++++++++|+|||+.++..   .+...+.        .....+...|++|.  +| ....+       .. .....
T Consensus       314 a~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~~~--------~~~~~~~~~gn~~~~~ng~~~~d~~~~~n~~~~~~~~~~  385 (416)
T 1vbl_A          314 AWGVGVFSQIYAQNNYFSFDWDIDPSLIIKVWS--------KNEESMYETGTIVDLPNGRRYIDLVASYNESNTLQLKKE  385 (416)
T ss_dssp             SEEEETTCEEEEESCEEEESSCCCGGGSEEEEC--------SSCCEEEEESCEEEETTEEEECCHHHHHHHHCSSCCEEC
T ss_pred             EeccCCCcEEEEECCEEECCCCCCccceeeeec--------cCCceEEecCCEEeecCCCcccccccccccCCcccccCC
Confidence            99999999999999999987532   1221110        12234556788875  34 11111       00 01123


Q ss_pred             cccCCCCCCCccccCChHHHHHHHHHhccCCCCC
Q 016742          339 SMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       339 ~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      ..|.|+  | .|++++|+ +|+++|.+.||++++
T Consensus       386 ~~~~P~--~-~y~~~~a~-~V~~~V~~~AGag~l  415 (416)
T 1vbl_A          386 VTWKPM--F-YHVIHPTP-SVPALVKAKAGAGNL  415 (416)
T ss_dssp             CSCCCC--C-CSCCCCGG-GHHHHHHHHCSTTCC
T ss_pred             cccCCc--c-ccccCCHH-HHHHHHhhccCCCcc
Confidence            456665  3 27899985 799999999999874

>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*

Probab=100.00  E-value=4.8e-63  Score=499.62  Aligned_cols=288  Identities=28%  Similarity=0.471  Sum_probs=235.3

Q ss_pred             cccccccCCCcccccC---CCCCCCCCC---eEEecCCCCCCCchHHHhh---hcCCCeEEEEEeceEEEecc-------
Q 016742           61 DCSLRALAGQAEGFGR---LAIGGLHGP---LYHVTTLADDGPGSLREGC---RMKEPLWIVFEVSGTIHLRS-------  124 (383)
Q Consensus        61 ~~~~~a~~~~aeGfg~---~ttGG~gG~---v~~VTnl~d~g~GSLr~ai---~~~~Pr~IVf~vsG~I~l~~-------  124 (383)
                      |..++.|+ +|+|||+   +||||++|+   ||+|||++|     |++||   +.++||+|+  |+|+|++.+       
T Consensus         2 ~~~~~~~~-~a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae-----L~~al~~~~~~~priI~--v~GtId~~~~~~g~~~   73 (399)
T 2o04_A            2 DLGHQTLG-SNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ-----LVSALGKETNTTPKIIY--IKGTIDMNVDDNLKPL   73 (399)
T ss_dssp             CTTTCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH-----HHHHHCCTTCCSCEEEE--ECSEEESSBCTTCCBC
T ss_pred             CccccccC-CCcceeecCCCCcCCCCCccceEEEeCCHHH-----HHHHHHhccCCCCEEEE--EcCEEecccCCccccc
Confidence            44566777 5999999   899999997   899999999     99999   789999887  789999741       


Q ss_pred             ------------------------------------------------eeEeccCcceeeeccceEEeCCcEEEeeeccE
Q 016742          125 ------------------------------------------------HLSVSSYKTIDGRGQRVKLTGKGLRLKECEHV  156 (383)
Q Consensus       125 ------------------------------------------------~l~V~snkTI~G~G~gi~I~G~gl~i~~a~NV  156 (383)
                                                                      +|+|.|||||+|+|.+++|.|.+|+|+. +||
T Consensus        74 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~-~NV  152 (399)
T 2o04_A           74 GLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKS-DNV  152 (399)
T ss_dssp             CHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEESCEEEECS-EEE
T ss_pred             cccccccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEeeCEEEeeC-CCE
Confidence                                                            5788999999999999999999999997 999


Q ss_pred             EEeeeEEecCC----------------CCCCCceEecCCCceEEEEceeeecC-----------------CCCceEeecC
Q 016742          157 IICNLEFEGGK----------------GPDVDAIQIKPKSKHIWIDRCSLRDY-----------------DDGLIDITRE  203 (383)
Q Consensus       157 IIRnL~ir~g~----------------~~d~DaI~i~~~s~nVwIDHcs~s~~-----------------~Dglidi~~~  203 (383)
                      |||||+||.+.                ..+.|+|+|+ +++|||||||+|+|+                 .||+||++++
T Consensus       153 IIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~  231 (399)
T 2o04_A          153 IIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITIN-GGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNG  231 (399)
T ss_dssp             EEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEE-SCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETT
T ss_pred             EEeCeEEecCccccccccccccccccccCCCCeEEec-CCCcEEEEeeeeecCCCccccccccccceeeccccceeeecc
Confidence            99999999752                1367999997 799999999999996                 5999999999


Q ss_pred             CceEEEeCceecCCCceeEecCCCCCCCCc-ceeEEEeceeecCCCCcCCccccCeeEEEcceEEccc-------cceee
Q 016742          204 STDITVSRCHFSSHDKTMLIGADPSHVADR-CIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWG-------IYAVC  275 (383)
Q Consensus       204 s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~-~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~-------~~a~~  275 (383)
                      +++||||||+|.+|+|+||||++|+...|+ .++||||||||+++.+|+||+|+|++|+|||||+||.       .|+++
T Consensus       232 s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~~~~~~ya~g  311 (399)
T 2o04_A          232 ANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWG  311 (399)
T ss_dssp             CEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEESSCEEEEESCEEECCTTCSSSCCCCSEE
T ss_pred             CCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcccceEEEEcceEECCCCCCccceeeEec
Confidence            999999999999999999999998776665 5899999999999999999999999999999999884       38899


Q ss_pred             ecCCceEEEEceEEecCCcc--ceeeeeccccCCccccCcceEEecCCEEEcccccccc--ccCCcccccCCCCCCCccc
Q 016742          276 ASVDSQIYSQCNIYEAGQKK--MAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLM--TEAGEHSMFHPSEYYPTWT  351 (383)
Q Consensus       276 ~~~~a~i~~e~Nyf~~g~~~--~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~~~~~--~~~~~~~~~~p~~~Y~~yt  351 (383)
                      +++++++++|+|||+++..+  .++..+.         ....+...+++|. |....+.  ........|.|+++   |+
T Consensus       312 ~~~~~~i~~e~N~F~~~~~~~~~~~~~~s---------~~~~~~~~gn~~~-g~~~d~~~~~~~~~~~~~~p~~~---y~  378 (399)
T 2o04_A          312 IGKSSKIYAQNNVIDVPGLSAAKTISVFS---------GGTALYDSGTLLN-GTQINASAANGLSSSVGWTPSLH---GS  378 (399)
T ss_dssp             ECTTCEEEEESCEEECTTCCSGGGEEECT---------TCCBCEEESCEET-TEECCHHHHTTCBSCCSCCCCCC---CC
T ss_pred             cCCCcEEEEEceEEECCCCCccceeeecc---------CCceEEEeCceec-CcccccccccccCCCcccCCccc---cc
Confidence            99999999999999997321  1222210         1112234566553 4322110  01123346777642   68


Q ss_pred             cCChHHHHHHHHHhccCCCCC
Q 016742          352 VAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       352 ~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      +++| ++|+++|.+.||++++
T Consensus       379 ~~~a-~~V~~~V~~~AGag~l  398 (399)
T 2o04_A          379 IDAS-ANVKSNVINQAGAGKL  398 (399)
T ss_dssp             CCCH-HHHHHHHHHHCSTTSC
T ss_pred             cCCH-HHHHHhHHhcCCCCcc
Confidence            8988 5899999999999874

>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A

Probab=100.00  E-value=4.4e-60  Score=472.54  Aligned_cols=284  Identities=20%  Similarity=0.199  Sum_probs=224.8

Q ss_pred             ccCCCcccccCCCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec----------------------
Q 016742           66 ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR----------------------  123 (383)
Q Consensus        66 a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~----------------------  123 (383)
                      +++++|||||++||||++|++|+||+++|     ||+||++++||||||  +|+|++.                      
T Consensus         2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d-----L~~al~~~~prvIvv--~gti~~~~~~G~~t~~~c~~~~~~~~~~~   74 (359)
T 1idk_A            2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE-----LVSYLGDDEARVIVL--TKTFDFTDSEGTTTGTGCAPWGTASACQV   74 (359)
T ss_dssp             CCCSCCCGGGTTCCTTTTCCCBCCCSHHH-----HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSSTTBCE
T ss_pred             CCCCCCccccCCCCCCCCceEEecCCHHH-----HHHHHcCCCceEEEE--CCEEEeccccCcccccccccccccccccc
Confidence            46789999999999999999999999999     999999999999995  7999974                      


Q ss_pred             ---------------------------ceeEeccCcceeeeccceEEeCCcEEEe-eeccEEEeeeEEecCCC---CCCC
Q 016742          124 ---------------------------SHLSVSSYKTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFEGGKG---PDVD  172 (383)
Q Consensus       124 ---------------------------~~l~V~snkTI~G~G~gi~I~G~gl~i~-~a~NVIIRnL~ir~g~~---~d~D  172 (383)
                                                 .+|.|.|||||+|+|.+++|.|.+|+|+ +++|||||||+||.+..   ++.|
T Consensus        75 ~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~D  154 (359)
T 1idk_A           75 AIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGD  154 (359)
T ss_dssp             EECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCC
T ss_pred             ccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEecceEEEecCCCcEEEeCeEEEcccccccccCC
Confidence                                       3588999999999999999999999998 79999999999998643   5789


Q ss_pred             ceEecCCCceEEEEceeeecCCCCceEe-ecCCceEEEeCceecCC------------CceeEecCCCCCCCCcceeEEE
Q 016742          173 AIQIKPKSKHIWIDRCSLRDYDDGLIDI-TRESTDITVSRCHFSSH------------DKTMLIGADPSHVADRCIRVTI  239 (383)
Q Consensus       173 aI~i~~~s~nVwIDHcs~s~~~Dglidi-~~~s~~VTIS~n~f~~H------------~k~~LiG~~d~~~~d~~~~VT~  239 (383)
                      +|.|+ ++++||||||+|+|..|++++. ++++++||||||+|.+|            +|++|+|++|        +|||
T Consensus       155 aI~i~-~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G~sd--------~vT~  225 (359)
T 1idk_A          155 AITLD-DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDAD--------LVTM  225 (359)
T ss_dssp             SEEEC-SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSC--------EEEE
T ss_pred             ceeec-CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccceEEEEecCC--------CeEE
Confidence            99998 7999999999999999999987 67899999999999743            3789999865        8999


Q ss_pred             eceeecCCCCcCCccccC-eeEEEcceEEccccceeeecCCceEEEEceEEecCCccceee---eeccc-cCCc--cccC
Q 016742          240 HHCFFDGTRQRHPRVRYA-KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFK---YLTEK-ASDK--EEAR  312 (383)
Q Consensus       240 hhN~f~~~~~R~Pr~r~G-~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~---~~~~~-~~~~--~~~~  312 (383)
                      |||||+++.+|+||+|+| ++|++||||++|..|++.+++++++++|+|||++++.+....   .+... +...  =+..
T Consensus       226 hhN~f~~~~~R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~~~~G~~~~~~~~~~~~~c~~~  305 (359)
T 1idk_A          226 KGNYIYHTSGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSSTAGEVCSTY  305 (359)
T ss_dssp             ESCEEESBCSCTTEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEEEEESSEEECCSSTTGGGGGHHH
T ss_pred             EceEeecCcccCccccCCceEEEECCEEecccceEEeccCCcEEEEEccEEECCCCceecCCCCEEeecCcccchhhhhc
Confidence            999999999999999998 599999999999999999999999999999999886553210   00000 0000  0001


Q ss_pred             cceEEecCCEEEccccccccccCCcccccCCCCCCCccccCChHHHHHHHHHhccCCCC
Q 016742          313 SGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQD  371 (383)
Q Consensus       313 ~g~~~~~gn~~~nG~~~~~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~  371 (383)
                      .|++. ..|.|.+....  ..  .....++++..|..|++++|+ .|++.|...||+.+
T Consensus       306 lg~~~-~~N~~~~sg~~--~~--~~~~~~~~~~~~~~~~~~~a~-~v~~~V~~~AG~g~  358 (359)
T 1idk_A          306 LGRDC-VINGFGSSGTF--SE--DSTSFLSDFEGKNIASASAYT-SVASRVVANAGQGN  358 (359)
T ss_dssp             HSSCC-CCCEEESSCCC--CC--BCCTTGGGGTTSCCCCCCCGG-GHHHHHHHHCSTTC
T ss_pred             cCcce-eecccccCCcc--cc--CCcccccccCCccccccCCHH-HhhhhhhccCCCcc
Confidence            12222 24556532111  01  111123333334347899996 57777777899876

>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2

Probab=100.00  E-value=2.6e-59  Score=467.09  Aligned_cols=283  Identities=22%  Similarity=0.249  Sum_probs=221.4

Q ss_pred             ccCCCcccccCCCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec----------------------
Q 016742           66 ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR----------------------  123 (383)
Q Consensus        66 a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~----------------------  123 (383)
                      ++.++|||||++||||++|++++||||+|     ||+||++++||+|||  +|+|++.                      
T Consensus         2 ~~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~-----L~~al~~~~prvIvv--~gtid~~g~~g~~~~~~c~~~~~~~~~~~   74 (359)
T 1qcx_A            2 GVVGAAEGFAHGVTGGGSASPVYPTTTDE-----LVSYLGDNEPRVIIL--DQTFDFTGTEGTETTTGCAPWGTASQCQV   74 (359)
T ss_dssp             CCCSCCCGGGTTCCTTTTCCCBCCCSHHH-----HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSSTTBCE
T ss_pred             CcCCCcceeecCCcCCCCcceEEeCCHHH-----HHHHHcCCCCeEEEE--CcEEeeccccccccccccccccccccccc
Confidence            35688999999999999999999999999     999999999999993  4555531                      


Q ss_pred             ---------------------------ceeEeccCcceeeeccceEEeCCcEEEe-eeccEEEeeeEEecCCC---CCCC
Q 016742          124 ---------------------------SHLSVSSYKTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFEGGKG---PDVD  172 (383)
Q Consensus       124 ---------------------------~~l~V~snkTI~G~G~gi~I~G~gl~i~-~a~NVIIRnL~ir~g~~---~d~D  172 (383)
                                                 ..|.|.|||||+|+|.+++|.|.+|+|+ +++|||||||+||.+..   +++|
T Consensus        75 ~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~D  154 (359)
T 1qcx_A           75 AINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGD  154 (359)
T ss_dssp             EECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCC
T ss_pred             eecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEecceEEEecCCCCEEEeCcEEEecCCcccccCc
Confidence                                       2588899999999999999999999998 89999999999998753   5689


Q ss_pred             ceEecCCCceEEEEceeeecCCCCce-EeecCCceEEEeCceec-----------CC-CceeEecCCCCCCCCcceeEEE
Q 016742          173 AIQIKPKSKHIWIDRCSLRDYDDGLI-DITRESTDITVSRCHFS-----------SH-DKTMLIGADPSHVADRCIRVTI  239 (383)
Q Consensus       173 aI~i~~~s~nVwIDHcs~s~~~Dgli-di~~~s~~VTIS~n~f~-----------~H-~k~~LiG~~d~~~~d~~~~VT~  239 (383)
                      +|.|+ ++++||||||+|+|..||++ +.++++++||||||+|.           .| +++||+|++|        +|||
T Consensus       155 aI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd--------~vT~  225 (359)
T 1qcx_A          155 AITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSND--------MVTL  225 (359)
T ss_dssp             SEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSE--------EEEE
T ss_pred             eeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecCCC--------Ceeh
Confidence            99998 79999999999999999998 45678999999999997           35 5788999764        7999


Q ss_pred             eceeecCCCCcCCccccC-eeEEEcceEEccccceeeecCCceEEEEceEEecCCccceeeeecccc-CCcc-------c
Q 016742          240 HHCFFDGTRQRHPRVRYA-KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKA-SDKE-------E  310 (383)
Q Consensus       240 hhN~f~~~~~R~Pr~r~G-~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~-~~~~-------~  310 (383)
                      |||||+++.+|+||+|++ ++|++||||++|..|++++++++++++|+|||++++.+..... .... ...+       +
T Consensus       226 ~~N~f~~~~~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~~~~~~~~~~-~g~~f~~~~~~~~~~c~  304 (359)
T 1qcx_A          226 KGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPI-SGQLFSSPDANTNQQCA  304 (359)
T ss_dssp             ESCEEESBCSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEECSSC-SSEEECCCSHHHHGGGH
T ss_pred             cccEeccCcccCceecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEECCCcccCcCC-CCceeecccccccchhh
Confidence            999999999999999986 6999999999999999999999999999999999876532100 0000 0000       0


Q ss_pred             cCcceEEecCCEEEccccccccccCCcccccCCCCCCCccccCChHHHHHHHHHhccCCCC
Q 016742          311 ARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQD  371 (383)
Q Consensus       311 ~~~g~~~~~gn~~~nG~~~~~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~  371 (383)
                      ...|++. ..|.|.+....   . ......+.++..|..|++++|+ .|++.|...||+.+
T Consensus       305 ~~lgr~~-~~N~~~~sg~~---~-~~~~~~~~~~~~~~~~~~~~a~-~v~~~V~~~AG~gk  359 (359)
T 1qcx_A          305 SVFGRSC-QLNAFGNSGSM---S-GSDTSIISKFAGKTIAAAHPPG-AIAQWTMKNAGQGK  359 (359)
T ss_dssp             HHHSSCC-CCCEEESCCCC---C-CBCGGGGGGGTTSCCCCCCCGG-GHHHHHHHHSSTTC
T ss_pred             hccCccc-cccccccCCcc---c-CCCcccccccCCccccccccHH-HhhhhhhccCCCCC
Confidence            0011111 23555542111   1 1112233444445357899986 68888888899864

>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*

Probab=100.00  E-value=9.7e-58  Score=454.75  Aligned_cols=280  Identities=20%  Similarity=0.247  Sum_probs=220.4

Q ss_pred             CcccccC---CCCCCCCCCeEEecCCCCCCCchHHHhhhc-----------CCCeEEEEEeceEEEec------------
Q 016742           70 QAEGFGR---LAIGGLHGPLYHVTTLADDGPGSLREGCRM-----------KEPLWIVFEVSGTIHLR------------  123 (383)
Q Consensus        70 ~aeGfg~---~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~-----------~~Pr~IVf~vsG~I~l~------------  123 (383)
                      ..+|||.   +|+||  ..+++||++++     |++|+++           .+++.+||.|+|+|+|.            
T Consensus         3 ~~~G~at~~Ggt~gg--~~~~tvtt~~~-----L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~~~~~~   75 (353)
T 1air_A            3 DTGGYAATAGGNVTG--AVSKTATSMQD-----IVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQW   75 (353)
T ss_dssp             BCSSSCBCCTTCSTT--CEEEEESSHHH-----HHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTSGGGST
T ss_pred             CCCcceecCCCCCCC--cceEEeCCHHH-----HHHHHHhhccccccccccCCCceEEEEEccEEecccccccccccccc
Confidence            3578875   23443  46789999997     9999965           45666788899999982            


Q ss_pred             ----ceeEe---ccCcceeeeccceEEeCCcEEEeeeccEEEeeeEEecCCC--CCCCceEecCCCceEEEEceeeecC-
Q 016742          124 ----SHLSV---SSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKG--PDVDAIQIKPKSKHIWIDRCSLRDY-  193 (383)
Q Consensus       124 ----~~l~V---~snkTI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~~--~d~DaI~i~~~s~nVwIDHcs~s~~-  193 (383)
                          +.|.|   .+||||+|+..  .+.|.+|+|++++|||||||+|+....  .+.|+|+|+ +++|||||||+|+|. 
T Consensus        76 ~~~~~~~~i~~~~sn~TI~G~~~--~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s~~~  152 (353)
T 1air_A           76 SKDPRGVEIKEFTKGITIIGANG--SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAAN  152 (353)
T ss_dssp             TSCCCEEEEESBCSCEEEEECTT--CCBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEECCS
T ss_pred             ccCCCceEEEecCCCEEEEeccC--CCCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEecCC
Confidence                56777   58999999843  356889999999999999999997653  578999998 799999999999986 


Q ss_pred             ------------CCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEE
Q 016742          194 ------------DDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHL  261 (383)
Q Consensus       194 ------------~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv  261 (383)
                                  .||++|+++++++||||||+|.+|+|++|+|++++...   ++||||||||+++.+|+||+|+|++|+
T Consensus       153 ~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g---~~vT~hhN~f~~~~~R~Pr~r~G~~Hv  229 (353)
T 1air_A          153 HECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTG---RNITYHHNYYNDVNARLPLQRGGLVHA  229 (353)
T ss_dssp             CCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCC---CEEEEESCEEEEEEECSCEEESSEEEE
T ss_pred             cccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCC---ceEEEEceEEcCCcCCCCCCcCceEEE
Confidence                        39999999999999999999999999999999875332   699999999999999999999999999


Q ss_pred             EcceEEccccceeeecCCceEEEEceEEecCCccceeeeeccccCCccccCcceEEecCCEEEc--------ccc--cc-
Q 016742          262 YNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFIT--------GTQ--AG-  330 (383)
Q Consensus       262 ~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~n--------G~~--~~-  330 (383)
                      +||||++|..+++++++++++++|+|||+++..+...++        +....|+|...++.|.+        ...  .. 
T Consensus       230 ~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~~~p~~~~~--------~~~~~g~~~~~~n~~~~~~d~~~~~~~~~s~~~  301 (353)
T 1air_A          230 YNNLYTNITGSGLNVRQNGQALIENNWFEKAINPVTSRY--------DGKNFGTWVLKGNNITKPADFSTYSITWTADTK  301 (353)
T ss_dssp             ESCEEEEESSCSEEEETTCEEEEESCEEEEEESSEEECS--------SSSSCCEEEEESCSCCSTHHHHHHTEECCCCSS
T ss_pred             EccEEECCCCceeccCCCcEEEEEceEEECCCCceEecC--------CCCCCceeEecccccccccccceecccccCCCc
Confidence            999999999999999999999999999999865533211        12245788877765541        000  00 


Q ss_pred             ccccCC--cccccCCCCCCCccccCChHHHHHHHHHhccCCCCC
Q 016742          331 LMTEAG--EHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       331 ~~~~~~--~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      ...+..  ...-+.|+.+| .|++++| ++|++.|++.||+++.
T Consensus       302 ~~~~~~~~~~~g~~~~~~Y-~y~~~~a-~~V~~~V~~~AGag~~  343 (353)
T 1air_A          302 PYVNADSWTSTGTFPTVAY-NYSPVSA-QCVKDKLPGYAGVGKN  343 (353)
T ss_dssp             CCEECTTCCCCSCCCCCCS-CCCCCCH-HHHHHHGGGTSSSSST
T ss_pred             cccccccccccCCccccce-EEecCCH-HHhhhhhhhccCCCcc
Confidence            000000  00112244567 4999998 4899999999999883

>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A

Probab=98.82  E-value=1.6e-07  Score=98.96  Aligned_cols=116  Identities=16%  Similarity=0.229  Sum_probs=81.4

Q ss_pred             EEEeeeccEEEeeeEEecCCC--------CCCCceEecCC------CceEEEEceeeecCCCCceEeecCCceEEEeCce
Q 016742          148 LRLKECEHVIICNLEFEGGKG--------PDVDAIQIKPK------SKHIWIDRCSLRDYDDGLIDITRESTDITVSRCH  213 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~--------~d~DaI~i~~~------s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~  213 (383)
                      |.+..++||.|++|+|+....        ...|+|.++ +      ++||||++|.+....|.+|.+ +.+++|+|++|.
T Consensus       137 I~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~D-Gi~fd~~S~NV~I~Nc~I~~tGDDcIaI-ksseNI~I~Nc~  214 (609)
T 3gq8_A          137 LSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGD-GTTAPNPSENIWIENCEATGFGDDGITT-HHSQYINILNCY  214 (609)
T ss_dssp             EEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCT-TCCCSSCCEEEEEESCEEESCSSCSEEE-CSCEEEEEESCE
T ss_pred             EEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCC-CccccccceeEEEEeeEEEecCCCEEEe-cCCeeEEEEeEE
Confidence            667789999999999986532        112555554 4      899999999998877777888 469999999999


Q ss_pred             ecCC-----CceeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc----C---eeEEEcceEE-ccccce
Q 016742          214 FSSH-----DKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY----A---KVHLYNNYTR-NWGIYA  273 (383)
Q Consensus       214 f~~H-----~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~----G---~~hv~NN~~~-n~~~~a  273 (383)
                      +.+.     .-++-||..       ..+|++.+|.|.++. |-=|++.    +   .+++.||+.+ |+..|.
T Consensus       215 ~~gp~G~S~~~GIsIGsg-------s~NVtV~Nc~i~nt~-~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn  279 (609)
T 3gq8_A          215 SHDPRLTANCNGFEIDDG-------SRHVVLSNNRSKGCY-GGIEIKAHGDAPAAYNISINGHMSVEDVRSYN  279 (609)
T ss_dssp             EECCSSCSSCCSEEECTT-------CEEEEEESEEEESSS-EEEEEEECTTSCCCEEEEEEEEEEESCSEEEE
T ss_pred             EECCCCCCCcccEEccCC-------cccEEEEeeEEECCC-CEEEEEecCCCCccccEEEECCEeecCceEec
Confidence            9543     235555532       258999999998763 3444431    1   4788888654 443333

>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*

Probab=98.80  E-value=2.5e-07  Score=91.01  Aligned_cols=136  Identities=11%  Similarity=0.077  Sum_probs=89.3

Q ss_pred             eeccEEEeeeEEecCCC---------------------CCCCceEecCCCceEEEEcee-eecCCCCceEeecCCceEEE
Q 016742          152 ECEHVIICNLEFEGGKG---------------------PDVDAIQIKPKSKHIWIDRCS-LRDYDDGLIDITRESTDITV  209 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~~---------------------~d~DaI~i~~~s~nVwIDHcs-~s~~~Dglidi~~~s~~VTI  209 (383)
                      .++|+.|++++|+....                     ...|||.+. .++++.|.+|. +....|| |++...+++++|
T Consensus       132 ~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~-~s~~~~i~~N~~~~~~~~G-I~~~~~s~~v~I  209 (377)
T 2pyg_A          132 ADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVAD-YLVDSVFENNVAYANDRHG-FNVVTSTHDFVM  209 (377)
T ss_dssp             CEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEE-SEEEEEEESCEEESCSSCS-EEEETTCEEEEE
T ss_pred             cccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEe-ccCCcEEECcEEEccccCc-EEEEeccCCeEE
Confidence            46788888888885421                     224666665 56666677774 3445677 676566899999


Q ss_pred             eCceecCCCceeEe---cCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEccccceeeecCCceEEEE
Q 016742          210 SRCHFSSHDKTMLI---GADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNWGIYAVCASVDSQIYSQ  285 (383)
Q Consensus       210 S~n~f~~H~k~~Li---G~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~~~~a~~~~~~a~i~~e  285 (383)
                      ++|.|.+...+..+   |+...   ....++++.+|.+.++..+-..+.. ..+.+.||.+++....++....-..+.++
T Consensus       210 ~nN~i~~~~~g~~~~~~g~~~~---~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g~~~~~i~  286 (377)
T 2pyg_A          210 TNNVAYGNGSSGLVVQRGLEDL---ALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQIL  286 (377)
T ss_dssp             ESCEEESCSSCSEEEECCSSCC---CCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEEEEEEEEE
T ss_pred             ECCEEECccCceEEEeccccCC---CCCccEEEECCEEEcCccCceEeccccCeEEECCEEECCCCceEEEecCCCcEEE
Confidence            99999875555443   22211   1124789999987766554433332 35789999998875566655545577889


Q ss_pred             ceEEecC
Q 016742          286 CNIYEAG  292 (383)
Q Consensus       286 ~Nyf~~g  292 (383)
                      +|.|...
T Consensus       287 ~N~i~~n  293 (377)
T 2pyg_A          287 DNQIHDN  293 (377)
T ss_dssp             SCEEESC
T ss_pred             CcEEECC
Confidence            9999864

>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}

Probab=98.64  E-value=7.1e-07  Score=87.91  Aligned_cols=92  Identities=18%  Similarity=0.297  Sum_probs=64.5

Q ss_pred             eeccEEEeeeEEecCC-----CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCC
Q 016742          152 ECEHVIICNLEFEGGK-----GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD  226 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~-----~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~  226 (383)
                      .++||.|++++|....     ....|||.+. .+++|+|++|.+....|. |.++. +.+|+|++|.+..- .++.||+.
T Consensus       130 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~-~s~nV~I~n~~i~~gDDc-iaiks-g~nI~i~n~~~~~g-hGisiGSl  205 (339)
T 2iq7_A          130 SATTLGVYDVIIDNSAGDSAGGHNTDAFDVG-SSTGVYISGANVKNQDDC-LAINS-GTNITFTGGTCSGG-HGLSIGSV  205 (339)
T ss_dssp             SCEEEEEESCEEECGGGGGTTCCSCCSEEEE-SCEEEEEESCEEECSSCS-EEESS-EEEEEEESCEEESS-CCEEEEEE
T ss_pred             ccCCEEEEEEEEECCccccccCCCCCcEEEc-CcceEEEEecEEecCCCE-EEEcC-CccEEEEeEEEECC-ceEEECcC
Confidence            3445555555554321     2347999997 799999999999877665 88864 58999999999853 26778873


Q ss_pred             CCCCCCcceeEEEeceeecCC
Q 016742          227 PSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       227 d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      .........+|++.++.|.++
T Consensus       206 g~~~~~~v~nV~v~n~~~~~~  226 (339)
T 2iq7_A          206 GGRSDNTVKTVTISNSKIVNS  226 (339)
T ss_dssp             SSSSCCEEEEEEEEEEEEESC
T ss_pred             CcccCCCEEEEEEEeeEEECC
Confidence            222222345899999999875

>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9

Probab=98.62  E-value=6e-06  Score=83.25  Aligned_cols=203  Identities=9%  Similarity=0.030  Sum_probs=127.8

Q ss_pred             CCCeEEec-CCCCCCCc-------hHHHhhhcCCCeEEEEEeceEEE--ec----ceeEec------cCcceeeec-cce
Q 016742           83 HGPLYHVT-TLADDGPG-------SLREGCRMKEPLWIVFEVSGTIH--LR----SHLSVS------SYKTIDGRG-QRV  141 (383)
Q Consensus        83 gG~v~~VT-nl~d~g~G-------SLr~ai~~~~Pr~IVf~vsG~I~--l~----~~l~V~------snkTI~G~G-~gi  141 (383)
                      .+++|+|. +-+|+++|       +|++|++...|...|+--.|+..  +.    ..|.+.      ..+||.|.+ ...
T Consensus        13 ~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a~pGdtI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~g~~~   92 (400)
T 1ru4_A           13 TKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAANCGRA   92 (400)
T ss_dssp             CSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGGGCCE
T ss_pred             CccEEEEcCCCCCCCCCccccCCccHHHHHhhCCCCCEEEECCCeEccccccccceeEEecCCCCCCCCEEEEEecCCCC
Confidence            34566664 34455566       89999998777655555689998  43    346553      338999874 566


Q ss_pred             EEe-----C------CcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEe
Q 016742          142 KLT-----G------KGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVS  210 (383)
Q Consensus       142 ~I~-----G------~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS  210 (383)
                      +|.     +      .+|.| .+++|.|++|+|+...   ..||.+. + .++.|++|.|.+..+.-|.+...+.+.+|.
T Consensus        93 vI~~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g---~~GI~v~-g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~  166 (400)
T 1ru4_A           93 VFDFSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAG---YQGAYVI-G-SHNTFENTAFHHNRNTGLEINNGGSYNTVI  166 (400)
T ss_dssp             EEECCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCS---SCSEEEC-S-SSCEEESCEEESCSSCSEEECTTCCSCEEE
T ss_pred             EEeCCccCCccccceeEEEE-ECCeEEEEeEEEEeCC---CCcEEEe-C-CCcEEEeEEEECCCceeEEEEcccCCeEEE
Confidence            775     2      45888 4899999999998643   2489997 4 677899999999988557776555688899


Q ss_pred             CceecCCCc---------ee-EecCC--CCC---------CCC------cceeEEEeceeecCCCCcCC--------c--
Q 016742          211 RCHFSSHDK---------TM-LIGAD--PSH---------VAD------RCIRVTIHHCFFDGTRQRHP--------R--  253 (383)
Q Consensus       211 ~n~f~~H~k---------~~-LiG~~--d~~---------~~d------~~~~VT~hhN~f~~~~~R~P--------r--  253 (383)
                      +|.+.+...         ++ ++-..  ...         ..|      ..-.|+|.+|+..++....-        .  
T Consensus       167 nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnG  246 (400)
T 1ru4_A          167 NSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNG  246 (400)
T ss_dssp             SCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTCCCCCCS
T ss_pred             ceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECCccccccccccccCCCC
Confidence            998864320         11 11110  000         001      01246788886654432110        0  


Q ss_pred             cccC------eeEEEcceEEccccceeeecCCc-eEEEEceEEec
Q 016742          254 VRYA------KVHLYNNYTRNWGIYAVCASVDS-QIYSQCNIYEA  291 (383)
Q Consensus       254 ~r~G------~~hv~NN~~~n~~~~a~~~~~~a-~i~~e~Nyf~~  291 (383)
                      ++.|      ...|.||+.++-..+++...... .+.+++|....
T Consensus       247 f~lgg~~~~~~~~v~nn~a~~N~~~G~~~n~~~~~~~i~nNt~~~  291 (400)
T 1ru4_A          247 FKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYK  291 (400)
T ss_dssp             EECCCTTCCCCCEEESCEEESCSSEEEECTTCSSCCEEESCEEES
T ss_pred             EEEeccCCcCCEEEEeeEEECCcCcCEeecCCCCCEEEECeEEEC
Confidence            1111      35688998887777777765444 36778885543

>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*

Probab=98.58  E-value=1.5e-06  Score=90.25  Aligned_cols=197  Identities=19%  Similarity=0.235  Sum_probs=117.7

Q ss_pred             EEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEecceeEe------ccCcceeeec-cceEEeCCc-EEEeeeccEEE
Q 016742           87 YHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSV------SSYKTIDGRG-QRVKLTGKG-LRLKECEHVII  158 (383)
Q Consensus        87 ~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~~~l~V------~snkTI~G~G-~gi~I~G~g-l~i~~a~NVII  158 (383)
                      +.|.+..     +|++|+++..|...|+--.|+.+- ..|.+      ...+||.|.+ .+++|.|.. |.|. +++|.|
T Consensus        26 i~V~~~~-----~Lq~Ai~~A~pGDtI~L~~GtY~~-~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i~-g~~v~i   98 (506)
T 1dbg_A           26 QVVASNE-----TLYQVVKEVKPGGLVQIADGTYKD-VQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELR-GEHLIL   98 (506)
T ss_dssp             CEECSHH-----HHHHHHHHCCTTCEEEECSEEEET-CEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEEC-SSSEEE
T ss_pred             EEeCCHH-----HHHHHHHhCCCCCEEEECCCEEec-ceEEEecCCcCCCCEEEECCCCCccEEeCCceEEEE-cCCEEE
Confidence            5676543     599999987776555557899862 25666      4678999973 467788764 7776 799999


Q ss_pred             eeeEEecCCCC-------CCCceEecCCCceEEEEceeeecCCCCc-eEee-------cCCceEEEeCceecCC-CceeE
Q 016742          159 CNLEFEGGKGP-------DVDAIQIKPKSKHIWIDRCSLRDYDDGL-IDIT-------RESTDITVSRCHFSSH-DKTML  222 (383)
Q Consensus       159 RnL~ir~g~~~-------d~DaI~i~~~s~nVwIDHcs~s~~~Dgl-idi~-------~~s~~VTIS~n~f~~H-~k~~L  222 (383)
                      ++|+|+++...       +..+|.+.  ++++.|.+|.|....++. +.+.       -.+.+.+|.+|.|... ..+++
T Consensus        99 ~GL~i~~~~~~~~~~~~~~~~~iav~--G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~  176 (506)
T 1dbg_A           99 EGIWFKDGNRAIQAWKSHGPGLVAIY--GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQV  176 (506)
T ss_dssp             ESCEEEEECCCTTTCCTTSCCSEEEC--SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCS
T ss_pred             ECeEEECCCcceeeeecccccceEEe--cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEECCcCcceE
Confidence            99999976421       12456665  477889999999876651 1222       1245668999999752 23443


Q ss_pred             e-c---CCCCCCC---CcceeEEEeceeecCCCCcCCc---cccC-------eeEEEcceEEcc-ccceeeecCCceEEE
Q 016742          223 I-G---ADPSHVA---DRCIRVTIHHCFFDGTRQRHPR---VRYA-------KVHLYNNYTRNW-GIYAVCASVDSQIYS  284 (383)
Q Consensus       223 i-G---~~d~~~~---d~~~~VT~hhN~f~~~~~R~Pr---~r~G-------~~hv~NN~~~n~-~~~a~~~~~~a~i~~  284 (383)
                      + |   -.-....   +......++||+|.+...+.-+   +|+|       ...|.||++++. +.+++-........+
T Consensus       177 i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i  256 (506)
T 1dbg_A          177 INLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVY  256 (506)
T ss_dssp             EEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEE
T ss_pred             EecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEE
Confidence            3 1   1100000   1112567888888764211111   2333       456778877754 234443322222344


Q ss_pred             EceEEecC
Q 016742          285 QCNIYEAG  292 (383)
Q Consensus       285 e~Nyf~~g  292 (383)
                      .+|.|...
T Consensus       257 ~~N~~~~~  264 (506)
T 1dbg_A          257 YGNTYLNC  264 (506)
T ss_dssp             ESCEEESC
T ss_pred             ECCEEEcc
Confidence            55555543

>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*

Probab=98.57  E-value=2.1e-07  Score=93.62  Aligned_cols=183  Identities=14%  Similarity=0.192  Sum_probs=119.2

Q ss_pred             CCCeEEEEEeceEEEecceeEecc-CcceeeeccceE---Ee------C------Cc--EEEeee---------------
Q 016742          107 KEPLWIVFEVSGTIHLRSHLSVSS-YKTIDGRGQRVK---LT------G------KG--LRLKEC---------------  153 (383)
Q Consensus       107 ~~Pr~IVf~vsG~I~l~~~l~V~s-nkTI~G~G~gi~---I~------G------~g--l~i~~a---------------  153 (383)
                      ..|.-++.-..|+..|+.+|.|.. ++||.|.+.+.+   |.      |      +|  |+|..+               
T Consensus        54 A~pGdvI~L~~G~Y~l~g~ivIdkp~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~  133 (410)
T 2inu_A           54 ARPGAAIIIPPGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDP  133 (410)
T ss_dssp             SCCCEEEECCSEEEEECSCEEECCTTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSS
T ss_pred             CCCCCEEEECCCeeccCCcEEEecCcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCc
Confidence            345556666789999999999985 599999876654   66      3      22  455433               


Q ss_pred             --ccEEEeeeEEecC-----C---CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCce-eE
Q 016742          154 --EHVIICNLEFEGG-----K---GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKT-ML  222 (383)
Q Consensus       154 --~NVIIRnL~ir~g-----~---~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~-~L  222 (383)
                        ++|.|++|.|++.     .   ....-||.+...++++.|.+|.|.....| |.+ +++++++|.+|.|.+..-+ -|
T Consensus       134 r~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fG-I~l-~~a~~~~I~~N~I~e~GNgI~L  211 (410)
T 2inu_A          134 RLSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHA-LIV-RGADALRVNDNMIAECGNCVEL  211 (410)
T ss_dssp             CEECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSEE-EEE-TTEESCEEESCEEESSSEEEEE
T ss_pred             ccCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccEE-EEE-ccCCCcEEECCEEEecCCceee
Confidence              7888888888865     2   13367888875578889999999999999 677 5789999999999854333 36


Q ss_pred             ecC-CCC--------CCCCc-ceeEEE-eceeecCCCC-cCCccc--c---CeeEEEcceEEccccceeeecC--CceEE
Q 016742          223 IGA-DPS--------HVADR-CIRVTI-HHCFFDGTRQ-RHPRVR--Y---AKVHLYNNYTRNWGIYAVCASV--DSQIY  283 (383)
Q Consensus       223 iG~-~d~--------~~~d~-~~~VT~-hhN~f~~~~~-R~Pr~r--~---G~~hv~NN~~~n~~~~a~~~~~--~a~i~  283 (383)
                      ||. ...        ...|+ .+.+.. +++++.++.. +.=|..  +   ....+.+|.+.+.. +++-.-.  ....+
T Consensus       212 ~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh~m~s~~~~i~~N~f~~~~-~Gi~~M~s~~~~n~  290 (410)
T 2inu_A          212 TGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNLFPRGRSLIEFTGCNRCSVTSNRLQGFY-PGMLRLLNGCKENL  290 (410)
T ss_dssp             CSCEESCEEESCEEECCTTSEEEEEESEESCEEESCEECSCSSEEEEEESCBSCEEESCEEEESS-SCSEEEESSCBSCE
T ss_pred             ccccccceEecceeeecCCCCEEEEEeCCCCEEECCCcccCcceEEEEEccCCCEEECCEEecce-eEEEEEEcCCCCCE
Confidence            662 111        11222 145555 5567777644 323321  1   23567888777553 3332222  23567


Q ss_pred             EEceEEecC
Q 016742          284 SQCNIYEAG  292 (383)
Q Consensus       284 ~e~Nyf~~g  292 (383)
                      +++|.|...
T Consensus       291 v~~N~f~~~  299 (410)
T 2inu_A          291 ITANHIRRT  299 (410)
T ss_dssp             EESCEEEEE
T ss_pred             EECCEEecc
Confidence            788888753

>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*

Probab=98.56  E-value=1.6e-06  Score=85.50  Aligned_cols=92  Identities=16%  Similarity=0.225  Sum_probs=63.7

Q ss_pred             eeccEEEeeeEEecCC-----CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCC
Q 016742          152 ECEHVIICNLEFEGGK-----GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD  226 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~-----~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~  226 (383)
                      .++||.|++++|....     ....|||.+. .+++|+|++|.++...|. |.++. +.+|+|++|.+..- .++.||+.
T Consensus       134 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~-~s~nV~I~n~~i~~gDDc-Iaiks-g~nI~i~n~~~~~g-hGisiGS~  209 (339)
T 1ia5_A          134 GSDYLTLKDITIDNSDGDDNGGHNTDAFDIG-TSTYVTISGATVYNQDDC-VAVNS-GENIYFSGGYCSGG-HGLSIGSV  209 (339)
T ss_dssp             SCEEEEEESCEEECGGGTTTTCCSCCSEEEE-SCEEEEEESCEEECSSCS-EEESS-EEEEEEESCEEESS-SCEEEEEE
T ss_pred             cccCeEEeeEEEECCccccccCCCCCcEEec-CCceEEEEeeEEEcCCCe-EEEeC-CeEEEEEeEEEECC-ceEEECcC
Confidence            3445555555554321     2347999997 799999999999876665 88865 58999999999852 36778874


Q ss_pred             CCCCCCcceeEEEeceeecCC
Q 016742          227 PSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       227 d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      .........+|++.++.|.++
T Consensus       210 g~~~~~~v~nV~v~n~~~~~t  230 (339)
T 1ia5_A          210 GGRSDNTVKNVTFVDSTIINS  230 (339)
T ss_dssp             CSSSCCEEEEEEEEEEEEESC
T ss_pred             CcccCCCEEEEEEEeeEEECC
Confidence            322222335899999988774

>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3

Probab=98.53  E-value=1.8e-06  Score=84.84  Aligned_cols=95  Identities=18%  Similarity=0.336  Sum_probs=67.2

Q ss_pred             EEEeeeccEEEeeeEEecCC-----CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGK-----GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~-----~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |.+. ++||.|++++|....     ....|||.+. .+++|+|.+|.+....|. |.++. +.+|+|++|.+.. ..++.
T Consensus       126 i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~-~s~nV~I~n~~i~~gDDc-iaiks-g~nI~i~n~~~~~-ghGis  200 (336)
T 1nhc_A          126 ISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDIS-ESTGVYISGATVKNQDDC-IAINS-GESISFTGGTCSG-GHGLS  200 (336)
T ss_dssp             EEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEEC-SCEEEEEESCEEESSSEE-EEESS-EEEEEEESCEEES-SSEEE
T ss_pred             EEEE-eCCEEEEEEEEECCCcccccCCCCCcEEec-CCCeEEEEeCEEEcCCCE-EEEeC-CeEEEEEeEEEEC-CcCce
Confidence            4444 556666666665432     3457999997 799999999999887665 78864 5899999999985 23677


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCC
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      ||+........-.+|++.++.|.++
T Consensus       201 iGS~g~~~~~~v~nV~v~n~~~~~t  225 (336)
T 1nhc_A          201 IGSVGGRDDNTVKNVTISDSTVSNS  225 (336)
T ss_dssp             EEEESSSSCCEEEEEEEEEEEEESC
T ss_pred             EccCccccCCCEEEEEEEeeEEECC
Confidence            8874322222235899999998775

>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3

Probab=98.40  E-value=3.1e-06  Score=84.17  Aligned_cols=95  Identities=15%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             EEEeeeccEEEeeeEEecCC-----CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          148 LRLKECEHVIICNLEFEGGK-----GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~-----~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      |.+. ++||.|+|++|....     ....|||.+. .++||+|.+|.+....|. |.++. ..+|+|++|.+... .++-
T Consensus       152 i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~-~s~nV~I~n~~i~~gDDc-Iaiks-g~nI~i~n~~~~~g-hGis  226 (362)
T 1czf_A          152 FSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVG-NSVGVNIIKPWVHNQDDC-LAVNS-GENIWFTGGTCIGG-HGLS  226 (362)
T ss_dssp             EEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEEC-SCEEEEEESCEEECSSCS-EEESS-EEEEEEESCEEESS-CCEE
T ss_pred             EEEe-eCCEEEEEEEEECCccccccCCCCCceeec-CcceEEEEeeEEecCCCE-EEEeC-CeEEEEEEEEEeCC-ceeE
Confidence            4444 566666666666421     3457999997 799999999999977665 88865 48999999999863 2677


Q ss_pred             ecCCCCCCCCcceeEEEeceeecCC
Q 016742          223 IGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       223 iG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      ||+........-.+|++.++.|.++
T Consensus       227 iGS~G~~~~~~v~nV~v~n~~~~~t  251 (362)
T 1czf_A          227 IGSVGDRSNNVVKNVTIEHSTVSNS  251 (362)
T ss_dssp             EEEECSSSCCEEEEEEEEEEEEEEE
T ss_pred             EeeccccCCCCEEEEEEEeeEEECC
Confidence            8873221222235899999988765

>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3

Probab=98.40  E-value=1.9e-06  Score=85.74  Aligned_cols=114  Identities=20%  Similarity=0.276  Sum_probs=84.9

Q ss_pred             cCcceeeeccceEEeC---CcEEEeeeccEEEeeeEEecCC-CCCCCceEecCCCceEEEEceeeecCCCCceEeec---
Q 016742          130 SYKTIDGRGQRVKLTG---KGLRLKECEHVIICNLEFEGGK-GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR---  202 (383)
Q Consensus       130 snkTI~G~G~gi~I~G---~gl~i~~a~NVIIRnL~ir~g~-~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~---  202 (383)
                      +|++|.|    ++|.+   ..+.+..++||.|+|++|+... ....|||.+. .+++|+|++|.|....|. |.++.   
T Consensus       160 ~nv~I~~----iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~-~s~nV~I~n~~i~~gDDc-Iaiks~~~  233 (376)
T 1bhe_A          160 KNFTLYN----VSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPM-SSKNITIAYSNIATGDDN-VAIKAYKG  233 (376)
T ss_dssp             EEEEEEE----EEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEE-SCEEEEEESCEEECSSCS-EEEEECTT
T ss_pred             eEEEEEe----EEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeec-CCceEEEEeCEEecCCCe-EEEcccCC
Confidence            3455554    35544   3477778999999999999753 3468999997 799999999999876555 88873   


Q ss_pred             --CCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccc
Q 016742          203 --ESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       203 --~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                        .+.+|+|++|.|.. ..++-||+...    ...+|++.+|.|.++. |.-|++
T Consensus       234 ~~~s~nI~I~n~~~~~-ghGisiGSe~~----~v~nV~v~n~~~~~t~-~GirIK  282 (376)
T 1bhe_A          234 RAETRNISILHNDFGT-GHGMSIGSETM----GVYNVTVDDLKMNGTT-NGLRIK  282 (376)
T ss_dssp             SCCEEEEEEEEEEECS-SSCEEEEEEES----SEEEEEEEEEEEESCS-EEEEEE
T ss_pred             CCCceEEEEEeeEEEc-cccEEeccCCc----cEeeEEEEeeEEeCCC-cEEEEE
Confidence              68999999999974 44577887432    2358999999998863 334443

>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*

Probab=98.34  E-value=6.7e-06  Score=86.98  Aligned_cols=129  Identities=14%  Similarity=0.110  Sum_probs=89.7

Q ss_pred             CcceeeeccceEEeCC---cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecC----
Q 016742          131 YKTIDGRGQRVKLTGK---GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRE----  203 (383)
Q Consensus       131 nkTI~G~G~gi~I~G~---gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~----  203 (383)
                      |++|.|    ++|.+.   +|.+..++||.|++|+|........|||.+. .+++|+|++|.|..+ |.+|.++.+    
T Consensus       341 nv~I~g----iti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~-~s~nV~I~n~~i~~g-DD~Iaiksg~~~~  414 (608)
T 2uvf_A          341 NVYLAG----FTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFG-NSQNVMVFNNFFDTG-DDCINFAAGTGEK  414 (608)
T ss_dssp             EEEEES----CEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEE-SCEEEEEESCEEECS-SCSEEEECCCSGG
T ss_pred             eEEEeC----cEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEec-CCceEEEEeeEEecC-CceEEecCCcCcc
Confidence            445544    355543   4777789999999999987555568999997 899999999999876 545777643    


Q ss_pred             ------CceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccc-----cCe---eEEEcceEEcc
Q 016742          204 ------STDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR-----YAK---VHLYNNYTRNW  269 (383)
Q Consensus       204 ------s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r-----~G~---~hv~NN~~~n~  269 (383)
                            +.+|+|++|.|..-.-+..||+..   .....+|++.+|.|.++. +-=|++     .|.   +.+.|+.+.+.
T Consensus       415 g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~---~~~v~nI~v~n~~~~~t~-~GirIKt~~g~gG~v~nI~~~ni~m~~v  490 (608)
T 2uvf_A          415 AQEQEPMKGAWLFNNYFRMGHGAIVTGSHT---GAWIEDILAENNVMYLTD-IGLRAKSTSTIGGGARNVTFRNNAMRDL  490 (608)
T ss_dssp             GGGSCCEEEEEEESCEECSSSCSEEEESCC---TTCEEEEEEESCEEESCS-EEEEEEEETTTCCEEEEEEEEEEEEEEE
T ss_pred             ccccccccCEEEEeEEEeCCCCeEEEcccC---CCCEEEEEEEeEEEECCC-ceEEEeeecCCCceEECcEEEeeEEEcc
Confidence                  689999999998633234478742   223358999999998863 223332     232   45666655554

>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3

Probab=98.33  E-value=3.2e-05  Score=78.36  Aligned_cols=95  Identities=13%  Similarity=0.304  Sum_probs=71.5

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCceeEecCC
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGAD  226 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~  226 (383)
                      +|.+..++||.|+|++|..+.....|||.+. . ++|+|.+|.+....| +|.++.++.||+|++|.+... .++.||+.
T Consensus       152 ~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~-~-~nV~I~n~~i~~gDD-~Iai~s~~~nI~I~n~~~~~~-~GisIGS~  227 (422)
T 1rmg_A          152 HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVW-G-SNIWVHDVEVTNKDE-CVTVKSPANNILVESIYCNWS-GGCAMGSL  227 (422)
T ss_dssp             SEEEEEEEEEEEEEEEEECCSSTTCCSEEEE-E-EEEEEEEEEEESSSE-EEEEEEEEEEEEEEEEEEESS-SEEEEEEE
T ss_pred             EEEEeCcCCEEEEeEEEECCCCCCCccEeec-C-CeEEEEeeEEeCCCC-eEEeCCCCcCEEEEeEEEcCC-cceeeccc
Confidence            4566667888888888887433457999997 6 999999999986655 588987789999999998753 37778763


Q ss_pred             CCCCCCcceeEEEeceeecCC
Q 016742          227 PSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       227 d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      ...  ....+|++.+|.|.++
T Consensus       228 g~~--~~v~nV~v~n~~~~~~  246 (422)
T 1rmg_A          228 GAD--TDVTDIVYRNVYTWSS  246 (422)
T ss_dssp             CTT--EEEEEEEEEEEEEESS
T ss_pred             CCC--CcEEEEEEEeEEEecc
Confidence            211  1235899999998876

>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3

Probab=98.23  E-value=2e-05  Score=79.87  Aligned_cols=107  Identities=15%  Similarity=0.214  Sum_probs=72.0

Q ss_pred             eEeccCcceeeeccce----EEeCCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec----CCCCc
Q 016742          126 LSVSSYKTIDGRGQRV----KLTGKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD----YDDGL  197 (383)
Q Consensus       126 l~V~snkTI~G~G~gi----~I~G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~----~~Dgl  197 (383)
                      +.|...-||+|+|..-    .-.-..|.+..++||.|++|+|+...   ..+|.+. .+++|.|++|.+..    ..|| 
T Consensus       104 i~i~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~nsp---~~~i~i~-~~~nv~I~n~~I~~~d~~ntDG-  178 (422)
T 1rmg_A          104 FSSTSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDAP---AFHFTMD-TCSDGEVYNMAIRGGNEGGLDG-  178 (422)
T ss_dssp             ECSSSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECCS---SCSEEEE-EEEEEEEEEEEEECCSSTTCCS-
T ss_pred             EeeccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECCC---ceEEEEe-CcCCEEEEeEEEECCCCCCCcc-
Confidence            4555556777776421    00222466677888888888888643   3578886 68888888888875    4677 


Q ss_pred             eEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecC
Q 016742          198 IDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDG  246 (383)
Q Consensus       198 idi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~  246 (383)
                      ||+..  ++|+|++|.|...+-++-|++.       ..+|++.+|.+..
T Consensus       179 idi~~--~nV~I~n~~i~~gDD~Iai~s~-------~~nI~I~n~~~~~  218 (422)
T 1rmg_A          179 IDVWG--SNIWVHDVEVTNKDECVTVKSP-------ANNILVESIYCNW  218 (422)
T ss_dssp             EEEEE--EEEEEEEEEEESSSEEEEEEEE-------EEEEEEEEEEEES
T ss_pred             EeecC--CeEEEEeeEEeCCCCeEEeCCC-------CcCEEEEeEEEcC
Confidence            67754  7888888888776666666651       2367777777654

>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}

Probab=98.18  E-value=8.4e-06  Score=83.34  Aligned_cols=114  Identities=24%  Similarity=0.337  Sum_probs=82.8

Q ss_pred             cCcceeeeccceEEeC---CcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecC---
Q 016742          130 SYKTIDGRGQRVKLTG---KGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRE---  203 (383)
Q Consensus       130 snkTI~G~G~gi~I~G---~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~---  203 (383)
                      .|++|.|    ++|..   ..+.+..++||.|++|+|... ....|||.+. .+++|+|++|.|..+ |.+|.++.+   
T Consensus       199 ~nv~i~g----iti~nsp~~~i~~~~~~nv~i~~v~I~~~-~~NtDGidi~-~s~nV~I~n~~i~~g-DDcIaiksg~~~  271 (448)
T 3jur_A          199 RNVLVEG----VKIINSPMWCIHPVLSENVIIRNIEISST-GPNNDGIDPE-SCKYMLIEKCRFDTG-DDSVVIKSGRDA  271 (448)
T ss_dssp             EEEEEES----CEEESCSSCSEEEESCEEEEEESCEEEEC-STTCCSBCCB-SCEEEEEESCEEEES-SEEEEEBCCCHH
T ss_pred             cceEEEe----eEEEeCCCceEeeeccCCEEEEeEEEeec-cCCCcccccc-CCcCEEEEeeEEEeC-CCcEEeccCccc
Confidence            3455554    34543   357777899999999999974 3467999997 799999999999985 555888765   


Q ss_pred             --------CceEEEeCcee--cCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCcc
Q 016742          204 --------STDITVSRCHF--SSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRV  254 (383)
Q Consensus       204 --------s~~VTIS~n~f--~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~  254 (383)
                              +.+|+|++|.+  ..-.-++-||+...   ....+|+|.+|.|.++ .+.=|+
T Consensus       272 dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~---~~v~nV~v~n~~~~~t-~~GirI  328 (448)
T 3jur_A          272 DGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMS---GGVRNVVARNNVYMNV-ERALRL  328 (448)
T ss_dssp             HHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCT---TCEEEEEEESCEEESC-SEEEEE
T ss_pred             cccccCCCceeEEEEEeEEecCCCcceEEECCccc---CcEEEEEEEEEEEecc-cceEEE
Confidence                    78999999999  32223677887531   2335899999999654 233344

>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3

Probab=98.08  E-value=1.7e-05  Score=78.36  Aligned_cols=97  Identities=19%  Similarity=0.255  Sum_probs=73.8

Q ss_pred             cEEEeeeccEEEeeeEEecC--C-----------CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCce
Q 016742          147 GLRLKECEHVIICNLEFEGG--K-----------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCH  213 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g--~-----------~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~  213 (383)
                      +|.+..++||.|++|+|...  .           ....|||.+. .+++|+|++|.+....| +|.++. +.+|+|++|.
T Consensus       129 ~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~-~s~nV~I~n~~i~~gDD-cIaiks-g~nI~i~n~~  205 (349)
T 1hg8_A          129 CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDIS-SSDHVTLDNNHVYNQDD-CVAVTS-GTNIVVSNMY  205 (349)
T ss_dssp             EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEE-SCEEEEEEEEEEECSSC-SEEESS-EEEEEEEEEE
T ss_pred             eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEc-cccEEEEEeeEEecCCC-eEEeeC-CeEEEEEeEE
Confidence            46777899999999999863  1           2458999997 79999999999996655 488865 5999999999


Q ss_pred             ecCCCceeEecCCCCCCCCcceeEEEeceeecCC
Q 016742          214 FSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       214 f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      +.. ..++-||+..........+|+|.+|.|.++
T Consensus       206 ~~~-ghGisiGS~G~~~~~~v~nV~v~n~~~~~~  238 (349)
T 1hg8_A          206 CSG-GHGLSIGSVGGKSDNVVDGVQFLSSQVVNS  238 (349)
T ss_dssp             EES-SCCEEEEEESSSSCCEEEEEEEEEEEEEEE
T ss_pred             EeC-CcceEEccccccccCCEEEEEEEEEEEECC
Confidence            975 235777774222222335899999988764

>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3

Probab=98.04  E-value=0.00011  Score=72.92  Aligned_cols=138  Identities=12%  Similarity=0.137  Sum_probs=96.7

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCcee
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTM  221 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~  221 (383)
                      .|.+.+++||.|++|+|+....   -.|.+. .+++|.|+++++..     ..|| ||+. .+++|+|++|.|...+-+.
T Consensus       153 ~i~~~~~~nv~I~~iti~nsp~---~~i~~~-~~~~v~i~~v~I~~~~~~~NtDG-id~~-~s~nV~I~n~~i~~gDDcI  226 (376)
T 1bhe_A          153 LIQINKSKNFTLYNVSLINSPN---FHVVFS-DGDGFTAWKTTIKTPSTARNTDG-IDPM-SSKNITIAYSNIATGDDNV  226 (376)
T ss_dssp             SEEEESCEEEEEEEEEEECCSS---CSEEEE-SCEEEEEEEEEEECCTTCSSCCS-EEEE-SCEEEEEESCEEECSSCSE
T ss_pred             EEEEEcceEEEEEeEEEECCCc---EEEEEe-CCCcEEEEeEEEECCCCCCCCce-Eeec-CCceEEEEeCEEecCCCeE
Confidence            4778889999999999998643   467886 79999999999975     5888 7884 6899999999999877666


Q ss_pred             EecCCCCCCCCcceeEEEeceeecCCCCcCCccccC-------eeEEEcceEEccccceeeecC----C---ceEEEEce
Q 016742          222 LIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYA-------KVHLYNNYTRNWGIYAVCASV----D---SQIYSQCN  287 (383)
Q Consensus       222 LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G-------~~hv~NN~~~n~~~~a~~~~~----~---a~i~~e~N  287 (383)
                      -|.+...  .....+|++.+|.+.....    +..|       .+.|.|+.+.+.. +++..-.    +   ..+.+++.
T Consensus       227 aiks~~~--~~~s~nI~I~n~~~~~ghG----isiGSe~~~v~nV~v~n~~~~~t~-~GirIKt~~g~~G~v~ni~f~ni  299 (376)
T 1bhe_A          227 AIKAYKG--RAETRNISILHNDFGTGHG----MSIGSETMGVYNVTVDDLKMNGTT-NGLRIKSDKSAAGVVNGVRYSNV  299 (376)
T ss_dssp             EEEECTT--SCCEEEEEEEEEEECSSSC----EEEEEEESSEEEEEEEEEEEESCS-EEEEEECCTTTCCEEEEEEEEEE
T ss_pred             EEcccCC--CCCceEEEEEeeEEEcccc----EEeccCCccEeeEEEEeeEEeCCC-cEEEEEEecCCCceEeeEEEEeE
Confidence            6653110  1123589999998875321    3322       4788899888753 3432211    1   24666777


Q ss_pred             EEecCCccce
Q 016742          288 IYEAGQKKMA  297 (383)
Q Consensus       288 yf~~g~~~~~  297 (383)
                      .++....+..
T Consensus       300 ~~~~v~~~i~  309 (376)
T 1bhe_A          300 VMKNVAKPIV  309 (376)
T ss_dssp             EEESCSEEEE
T ss_pred             EEeCCCceEE
Confidence            7776655443

>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2

Probab=98.04  E-value=0.0001  Score=73.33  Aligned_cols=140  Identities=17%  Similarity=0.238  Sum_probs=89.6

Q ss_pred             CCceEecCCCceEEEEceeeec-------CCCCceEeecCCceEEEeCceecCCCceeE-ecCCCCCCCCcceeEEEece
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRD-------YDDGLIDITRESTDITVSRCHFSSHDKTML-IGADPSHVADRCIRVTIHHC  242 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~-------~~Dglidi~~~s~~VTIS~n~f~~H~k~~L-iG~~d~~~~d~~~~VT~hhN  242 (383)
                      +.+|.|...++||+|.++.|..       ..|+ |.+. ++++|-|-+|.|+.-...++ .+..      ...+||+-+|
T Consensus       123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~Da-I~i~-~s~nvwIDHcs~s~~~d~~~~~~~~------~s~~vTISnn  194 (359)
T 1qcx_A          123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDA-ITVD-DSDLVWIDHVTTARIGRQHIVLGTS------ADNRVTISYS  194 (359)
T ss_dssp             SCCEEEETTCCCEEEESCEEEEECTTEETSCCS-EEEE-SCCCEEEESCEEEEESSCSEEECSS------CCEEEEEESC
T ss_pred             cceEEEecCCCCEEEeCcEEEecCCcccccCce-eEec-CCceEEEEeeEeeccCcCceeeccc------ccccEEEECc
Confidence            3568884358999999999985       3465 6674 68999999999874332222 2211      1248999999


Q ss_pred             eecCCCCcCCccc---------cC---eeEEEcceEEccccceeeecCCceEEEEceEEecCCccceeeeeccccCCccc
Q 016742          243 FFDGTRQRHPRVR---------YA---KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEE  310 (383)
Q Consensus       243 ~f~~~~~R~Pr~r---------~G---~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~  310 (383)
                      +|.+.....-+.+         .|   .+-+.+|+|.+.....-..+.+..+.+.||||..-..-   .+        ..
T Consensus       195 ~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r~~~~~hv~NN~~~n~~~~---a~--------~~  263 (359)
T 1qcx_A          195 LIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGH---AF--------EI  263 (359)
T ss_dssp             EEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEECSSEEEEEESCEEEEEEEE---EE--------EE
T ss_pred             EecCCccccccCcccccceeEEecCCCCeehcccEeccCcccCceecCCceEEEEccEEECccCe---EE--------ec
Confidence            9986443211111         12   57899999988765443334345688899999863211   11        11


Q ss_pred             cCcceEEecCCEEEccccc
Q 016742          311 ARSGCIRSEGDLFITGTQA  329 (383)
Q Consensus       311 ~~~g~~~~~gn~~~nG~~~  329 (383)
                      .....+..++|+|.++..+
T Consensus       264 ~~~~~i~~e~N~F~~~~~~  282 (359)
T 1qcx_A          264 GTGGYVLAEGNVFQDVNVV  282 (359)
T ss_dssp             CTTEEEEEESCEEEEEEEE
T ss_pred             CCCceEEEEeeEEECCCcc
Confidence            1245677899999987654

>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A

Probab=97.91  E-value=0.00012  Score=75.28  Aligned_cols=116  Identities=13%  Similarity=0.048  Sum_probs=79.3

Q ss_pred             cCcceeeeccceEEeCCc--------EEEeeeccEEEeeeEEecCCCC---------CCCceEecCCCceEEEEceeeec
Q 016742          130 SYKTIDGRGQRVKLTGKG--------LRLKECEHVIICNLEFEGGKGP---------DVDAIQIKPKSKHIWIDRCSLRD  192 (383)
Q Consensus       130 snkTI~G~G~gi~I~G~g--------l~i~~a~NVIIRnL~ir~g~~~---------d~DaI~i~~~s~nVwIDHcs~s~  192 (383)
                      .|++|.|.|....|.|.|        |.+..++||.|++|+|+..+.-         +.|||.+  .+++|+|.+|.+..
T Consensus       109 ~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i--~s~nV~I~n~~I~~  186 (464)
T 1h80_A          109 RNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH--WSRNGIIERIKQNN  186 (464)
T ss_dssp             EEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE--EEEEEEEEEEEEES
T ss_pred             cceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee--eccCEEEeceEEec
Confidence            577888876444666653        5677899999999999875531         2478777  48999999999998


Q ss_pred             CCCCce-EeecCCceEEEeCceecCCCceeEecCCCC----CCCCcceeEEEeceeecCCC
Q 016742          193 YDDGLI-DITRESTDITVSRCHFSSHDKTMLIGADPS----HVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       193 ~~Dgli-di~~~s~~VTIS~n~f~~H~k~~LiG~~d~----~~~d~~~~VT~hhN~f~~~~  248 (383)
                      ..|+.- .....+.+|+|++|.|.. ..++-|...+.    .......+|+|.++.|.+..
T Consensus       187 gddgiGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~  246 (464)
T 1h80_A          187 ALFGYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKGL  246 (464)
T ss_dssp             CCTTCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSS
T ss_pred             CCCeEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECCc
Confidence            876542 223468899999999987 44443432210    01111258888888887753

>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}

Probab=97.90  E-value=0.00037  Score=68.86  Aligned_cols=141  Identities=18%  Similarity=0.170  Sum_probs=91.0

Q ss_pred             CCceEecCCCceEEEEceeeecC------------CCCceEeecCCceEEEeCceecCCCceeE-ecCCCCCCCCcceeE
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRDY------------DDGLIDITRESTDITVSRCHFSSHDKTML-IGADPSHVADRCIRV  237 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~~------------~Dglidi~~~s~~VTIS~n~f~~H~k~~L-iG~~d~~~~d~~~~V  237 (383)
                      +.+|.|. +++||+|-++.|...            .|+ |.+ .++++|-|-+|.|+...-+++ +...       ...|
T Consensus        82 G~Gi~I~-~a~NVIIrnl~i~~~~~~~~~~~~~~~~Da-I~i-~~s~nVWIDHcs~s~~~Dg~idi~~~-------s~~v  151 (340)
T 3zsc_A           82 GGGLVIK-DAQNVIIRNIHFEGFYMEDDPRGKKYDFDY-INV-ENSHHIWIDHITFVNGNDGAVDIKKY-------SNYI  151 (340)
T ss_dssp             EEEEEEE-SCEEEEEESCEEECCCCTTCTTSCSSCCCS-EEE-ESCEEEEEESCEEESCSSCSEEEETT-------CEEE
T ss_pred             cCceEEE-cCceEEEeCeEEECCccccCccCCcCCCCe-EEE-ecCCcEEEEeeeeccCCccceEEecC-------CceE
Confidence            3578886 789999999999864            344 666 458999999999986543333 2211       2389


Q ss_pred             EEeceeecCCCCcCCcccc------------CeeEEEcceEEccccceeeecCCceEEEEceEEecCCccce----eeee
Q 016742          238 TIHHCFFDGTRQRHPRVRY------------AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMA----FKYL  301 (383)
Q Consensus       238 T~hhN~f~~~~~R~Pr~r~------------G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~----~~~~  301 (383)
                      |+-+|+|.++.. .-.+..            -++-+.+|+|.+.....=..+ ...+.+.||||..+.++..    +...
T Consensus       152 TISnn~f~~h~k-~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r-~G~~Hv~NN~~~n~~~~~~~~~~~~~y  229 (340)
T 3zsc_A          152 TVSWNKFVDHDK-VSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIR-FGMAHVFNNFYSMGLRTGVSGNVFPIY  229 (340)
T ss_dssp             EEESCEEESCSB-CCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEE-SSEEEEESCEEECCCCCSCSSCCSCCE
T ss_pred             EEECcEeccCce-eeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCccc-CCeEEEEccEEECCccccccccceeee
Confidence            999999987532 222221            268999999998765543333 2467889999998422211    1000


Q ss_pred             ccccCCccccCcceEEecCCEEEcccc
Q 016742          302 TEKASDKEEARSGCIRSEGDLFITGTQ  328 (383)
Q Consensus       302 ~~~~~~~~~~~~g~~~~~gn~~~nG~~  328 (383)
                         +  ........+..++|+|.+...
T Consensus       230 ---a--i~~~~~a~i~~E~N~F~~~~~  251 (340)
T 3zsc_A          230 ---G--VASAMGAKVHVEGNYFMGYGA  251 (340)
T ss_dssp             ---E--EEEETTCEEEEESCEEECSCH
T ss_pred             ---e--EecCCCCEEEEECcEEECCCc
Confidence               0  012234567789999998654

>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1

Probab=97.83  E-value=0.00029  Score=69.73  Aligned_cols=134  Identities=16%  Similarity=0.171  Sum_probs=88.0

Q ss_pred             CceEecCCCceEEEEceeeecC-----------------------CCCceEeecCCceEEEeCceecCCCceeE-ecCCC
Q 016742          172 DAIQIKPKSKHIWIDRCSLRDY-----------------------DDGLIDITRESTDITVSRCHFSSHDKTML-IGADP  227 (383)
Q Consensus       172 DaI~i~~~s~nVwIDHcs~s~~-----------------------~Dglidi~~~s~~VTIS~n~f~~H~k~~L-iG~~d  227 (383)
                      -+|.|. .++||+|.++.|.+.                       .|+ |.+. ++++|-|.+|.|+...-+++ +... 
T Consensus       106 ~gi~i~-~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~Da-I~i~-~s~nVwIDHcs~s~~~Dg~id~~~~-  181 (346)
T 1pxz_A          106 PCLFMR-KVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDA-ITMR-NVTNAWIDHNSLSDCSDGLIDVTLG-  181 (346)
T ss_dssp             CCEEEE-SCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCS-EEEE-SCEEEEEESCEEECCSSEEEEEESS-
T ss_pred             ceEEEE-ccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCE-EEEe-cCceEEEEeeEEecCCCCcEeeccC-
Confidence            578887 789999999999743                       344 6674 68999999999986554443 2211 


Q ss_pred             CCCCCcceeEEEeceeecCCCCcCCccc---------cCeeEEEcceE-EccccceeeecCCceEEEEceEEecCCccce
Q 016742          228 SHVADRCIRVTIHHCFFDGTRQRHPRVR---------YAKVHLYNNYT-RNWGIYAVCASVDSQIYSQCNIYEAGQKKMA  297 (383)
Q Consensus       228 ~~~~d~~~~VT~hhN~f~~~~~R~Pr~r---------~G~~hv~NN~~-~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~  297 (383)
                            ..+||+.+|+|.++. ..-.+.         ...+.+.+|+| .+.....-..+ ...+.+.||||..-..-. 
T Consensus       182 ------s~~vTISnn~f~~H~-k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r-~g~~hv~NN~~~~~~~~~-  252 (346)
T 1pxz_A          182 ------STGITISNNHFFNHH-KVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRAR-YGLVHVANNNYDPWNIYA-  252 (346)
T ss_dssp             ------CEEEEEESCEEESEE-EEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEE-SSEEEEESCEECCCSSCS-
T ss_pred             ------cceEEEEeeEEecCC-ceeEECCCCccccCCceEEEEEeeEEeCCccccCccEe-cceEEEEeeEEEcccceE-
Confidence                  138999999998652 111111         12678999999 77654432233 357889999998633111 


Q ss_pred             eeeeccccCCccccCcceEEecCCEEEcccc
Q 016742          298 FKYLTEKASDKEEARSGCIRSEGDLFITGTQ  328 (383)
Q Consensus       298 ~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~  328 (383)
                        +        .......+..++|+|..+..
T Consensus       253 --i--------~~~~~~~i~~egN~F~~~~~  273 (346)
T 1pxz_A          253 --I--------GGSSNPTILSEGNSFTAPSE  273 (346)
T ss_dssp             --E--------EEESCCEEEEESCEEECCSC
T ss_pred             --E--------eccCCceEEEECCEEECCCC
Confidence              1        01123467789999998753

>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*

Probab=97.81  E-value=0.0024  Score=67.52  Aligned_cols=137  Identities=12%  Similarity=0.097  Sum_probs=93.0

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec----CCCCceEeecCCceEEEeCceecCCCceeEe
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD----YDDGLIDITRESTDITVSRCHFSSHDKTMLI  223 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~----~~Dglidi~~~s~~VTIS~n~f~~H~k~~Li  223 (383)
                      |.+.+++||.|++|+|+...   .-+|.+. .+++|.|+++.+..    ..|| ||+. .+++|+|++|.|...+-+.-|
T Consensus       334 i~~~~~~nv~I~giti~ns~---~~~i~~~-~~~nv~i~~v~i~~~~~~NtDG-idi~-~s~nV~I~n~~i~~gDD~Iai  407 (608)
T 2uvf_A          334 MTLRGVENVYLAGFTVRNPA---FHGIMNL-ENHNVVANGLIHQTYDANNGDG-IEFG-NSQNVMVFNNFFDTGDDCINF  407 (608)
T ss_dssp             EEEESEEEEEEESCEEECCS---SCSEEEE-SCEEEEEESCEEECTTCTTCCS-EEEE-SCEEEEEESCEEECSSCSEEE
T ss_pred             EEEEeeeeEEEeCcEEecCC---CCEEEEe-cCCCEEEeeEEEcCCCCCCCCe-EEec-CCceEEEEeeEEecCCceEEe
Confidence            56677999999999999754   3468887 79999999999864    4788 8984 689999999999987777666


Q ss_pred             cCC-CCCC-CC-cceeEEEeceeecCCCCcCCcccc----C--eeEEEcceEEccccceeee-----cCC--ceEEEEce
Q 016742          224 GAD-PSHV-AD-RCIRVTIHHCFFDGTRQRHPRVRY----A--KVHLYNNYTRNWGIYAVCA-----SVD--SQIYSQCN  287 (383)
Q Consensus       224 G~~-d~~~-~d-~~~~VT~hhN~f~~~~~R~Pr~r~----G--~~hv~NN~~~n~~~~a~~~-----~~~--a~i~~e~N  287 (383)
                      .+. +... .. ...+|++.+|.+.+...-. .+..    +  .+.|.||++.+.. +++..     +.+  ..|.++++
T Consensus       408 ksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~-~iGS~~~~~v~nI~v~n~~~~~t~-~GirIKt~~g~gG~v~nI~~~ni  485 (608)
T 2uvf_A          408 AAGTGEKAQEQEPMKGAWLFNNYFRMGHGAI-VTGSHTGAWIEDILAENNVMYLTD-IGLRAKSTSTIGGGARNVTFRNN  485 (608)
T ss_dssp             ECCCSGGGGGSCCEEEEEEESCEECSSSCSE-EEESCCTTCEEEEEEESCEEESCS-EEEEEEEETTTCCEEEEEEEEEE
T ss_pred             cCCcCccccccccccCEEEEeEEEeCCCCeE-EEcccCCCCEEEEEEEeEEEECCC-ceEEEeeecCCCceEECcEEEee
Confidence            432 1110 01 1358999999887643210 1211    1  3789999998753 34432     111  35666777


Q ss_pred             EEecC
Q 016742          288 IYEAG  292 (383)
Q Consensus       288 yf~~g  292 (383)
                      .++..
T Consensus       486 ~m~~v  490 (608)
T 2uvf_A          486 AMRDL  490 (608)
T ss_dssp             EEEEE
T ss_pred             EEEcc
Confidence            66665

>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*

Probab=97.80  E-value=8.2e-05  Score=73.20  Aligned_cols=94  Identities=15%  Similarity=0.290  Sum_probs=72.5

Q ss_pred             cEEEeeecc-EEEeeeEEecCC------CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCc
Q 016742          147 GLRLKECEH-VIICNLEFEGGK------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDK  219 (383)
Q Consensus       147 gl~i~~a~N-VIIRnL~ir~g~------~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k  219 (383)
                      .|.+..++| |.|++|+|....      ....|||.+  .++||+|.+|.+....| +|.++.+ .||+|++|.+... .
T Consensus       121 ~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~~gDD-cIaiksg-~nI~i~n~~~~~g-h  195 (335)
T 1k5c_A          121 AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVKNQDD-CIAINDG-NNIRFENNQCSGG-H  195 (335)
T ss_dssp             CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEESSSC-SEEEEEE-EEEEEESCEEESS-C
T ss_pred             eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEEcCCC-EEEeeCC-eeEEEEEEEEECC-c
Confidence            466777899 999999999742      456899999  58999999999986655 5899764 8999999999852 3


Q ss_pred             eeEecCCCCCCCCcceeEEEeceeecCC
Q 016742          220 TMLIGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       220 ~~LiG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      ++-||+...  ...-.+|++.++.|.++
T Consensus       196 GisIGS~g~--~~~v~nV~v~n~~~~~t  221 (335)
T 1k5c_A          196 GISIGSIAT--GKHVSNVVIKGNTVTRS  221 (335)
T ss_dssp             CEEEEEECT--TCEEEEEEEESCEEEEE
T ss_pred             cCeEeeccC--CCCEEEEEEEeeEEECC
Confidence            577886532  12235899999988764

>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3

Probab=97.73  E-value=0.00035  Score=68.94  Aligned_cols=106  Identities=18%  Similarity=0.281  Sum_probs=78.4

Q ss_pred             EEE-e-eeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec-----------------CCCCceEeecCCceEE
Q 016742          148 LRL-K-ECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD-----------------YDDGLIDITRESTDIT  208 (383)
Q Consensus       148 l~i-~-~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~-----------------~~Dglidi~~~s~~VT  208 (383)
                      |.+ . .++||.|++|+|+...   ..+|.+. .+++|.|+++++..                 ..|| ||+ ..+++|+
T Consensus       105 i~~~~~~~~nv~I~giti~nsp---~~~i~i~-~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDG-id~-~~s~nV~  178 (349)
T 1hg8_A          105 FIVVQKTTGNSKITNLNIQNWP---VHCFDIT-GSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDG-FDI-SSSDHVT  178 (349)
T ss_dssp             EEEEEEEESSEEEESCEEECCS---SEEEEEE-SCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCS-EEE-ESCEEEE
T ss_pred             EEEeecCcCcEEEEEEEEEcCC---CceEEEe-ccCCEEEEEEEEECCCCccccccccccccCCCCCe-EEE-ccccEEE
Confidence            667 6 6779999999999753   4688997 79999999999974                 2677 788 4689999


Q ss_pred             EeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCcc------ccC---eeEEEcceEEcc
Q 016742          209 VSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRV------RYA---KVHLYNNYTRNW  269 (383)
Q Consensus       209 IS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~------r~G---~~hv~NN~~~n~  269 (383)
                      |.+|.|...+-+.-|.++        .+|++.+|.+.....  =.+      ..+   .+.|.|+.+.+.
T Consensus       179 I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ghG--isiGS~G~~~~~~v~nV~v~n~~~~~~  238 (349)
T 1hg8_A          179 LDNNHVYNQDDCVAVTSG--------TNIVVSNMYCSGGHG--LSIGSVGGKSDNVVDGVQFLSSQVVNS  238 (349)
T ss_dssp             EEEEEEECSSCSEEESSE--------EEEEEEEEEEESSCC--EEEEEESSSSCCEEEEEEEEEEEEEEE
T ss_pred             EEeeEEecCCCeEEeeCC--------eEEEEEeEEEeCCcc--eEEccccccccCCEEEEEEEEEEEECC
Confidence            999999877666666553        378999988865322  112      012   357788877764

>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A

Probab=97.66  E-value=0.001  Score=65.61  Aligned_cols=121  Identities=12%  Similarity=0.242  Sum_probs=82.5

Q ss_pred             chHHHhhhcCC---CeEEEEEeceEEEecceeEec-cCcceeeecc-ceEEeCC-------------------cEEEeee
Q 016742           98 GSLREGCRMKE---PLWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQ-RVKLTGK-------------------GLRLKEC  153 (383)
Q Consensus        98 GSLr~ai~~~~---Pr~IVf~vsG~I~l~~~l~V~-snkTI~G~G~-gi~I~G~-------------------gl~i~~a  153 (383)
                      -|+++||++..   .|++|+-..|+.+  +.|.|. +++||.|.|. ...|.+.                   .|.|. +
T Consensus        19 ~TIq~Ai~aap~~~~~~~I~I~~G~Y~--E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v~-a   95 (342)
T 2nsp_A           19 KTIADAIASAPAGSTPFVILIKNGVYN--ERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITIS-A   95 (342)
T ss_dssp             SSHHHHHHTSCSSSSCEEEEECSEEEE--CCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEEC-S
T ss_pred             chHHHHHHhcccCCCcEEEEEeCCEEE--EEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEEE-C
Confidence            36899997633   2345555679984  567785 6899999974 4445432                   36665 8


Q ss_pred             ccEEEeeeEEecCCC---------------CC--CCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecC
Q 016742          154 EHVIICNLEFEGGKG---------------PD--VDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS  216 (383)
Q Consensus       154 ~NVIIRnL~ir~g~~---------------~d--~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~  216 (383)
                      ++++++||+|+....               ..  .-||.|+-.+.++.+.+|.|....|.|++-   ....-+.+|.|..
T Consensus        96 ~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~---~gr~~~~~c~I~G  172 (342)
T 2nsp_A           96 KDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVS---GGRSFFSDCRISG  172 (342)
T ss_dssp             BSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEEC---SSEEEEESCEEEE
T ss_pred             CCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEEC---CCCEEEEcCEEEe
Confidence            999999999997531               11  235522445889999999999999986654   3467778888863


Q ss_pred             CCceeEecC
Q 016742          217 HDKTMLIGA  225 (383)
Q Consensus       217 H~k~~LiG~  225 (383)
                      . -=+++|.
T Consensus       173 ~-vDFIFG~  180 (342)
T 2nsp_A          173 T-VDFIFGD  180 (342)
T ss_dssp             S-EEEEEES
T ss_pred             c-eEEEeCC
Confidence            2 1245554

>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}

Probab=97.62  E-value=0.001  Score=67.88  Aligned_cols=121  Identities=15%  Similarity=0.203  Sum_probs=84.6

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec---CCCCceEeecCCceEEEeCceecCCCceeEe
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD---YDDGLIDITRESTDITVSRCHFSSHDKTMLI  223 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~---~~Dglidi~~~s~~VTIS~n~f~~H~k~~Li  223 (383)
                      .|.+.+++||.|++|+++....   -.|.+. .+++|.|+++++..   ..|| ||+. .+++|+|++|.|...+-+.-+
T Consensus       192 ~i~~~~~~nv~i~giti~nsp~---~~i~~~-~~~nv~i~~v~I~~~~~NtDG-idi~-~s~nV~I~n~~i~~gDDcIai  265 (448)
T 3jur_A          192 FVQFYRCRNVLVEGVKIINSPM---WCIHPV-LSENVIIRNIEISSTGPNNDG-IDPE-SCKYMLIEKCRFDTGDDSVVI  265 (448)
T ss_dssp             SEEEESCEEEEEESCEEESCSS---CSEEEE-SCEEEEEESCEEEECSTTCCS-BCCB-SCEEEEEESCEEEESSEEEEE
T ss_pred             EEEEEcccceEEEeeEEEeCCC---ceEeee-ccCCEEEEeEEEeeccCCCcc-cccc-CCcCEEEEeeEEEeCCCcEEe
Confidence            4778889999999999997643   368887 79999999999985   6899 7884 589999999999987777777


Q ss_pred             cCCCCC----CCCcceeEEEeceeecCCCCcC-Cccc----c--CeeEEEcceEEcccccee
Q 016742          224 GADPSH----VADRCIRVTIHHCFFDGTRQRH-PRVR----Y--AKVHLYNNYTRNWGIYAV  274 (383)
Q Consensus       224 G~~d~~----~~d~~~~VT~hhN~f~~~~~R~-Pr~r----~--G~~hv~NN~~~n~~~~a~  274 (383)
                      .+....    ..-...+|++.+|++.+..... =.+.    .  -.+.|.|+++.+.. +++
T Consensus       266 ksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~-~Gi  326 (448)
T 3jur_A          266 KSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVE-RAL  326 (448)
T ss_dssp             BCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCS-EEE
T ss_pred             ccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEeccc-ceE
Confidence            654110    0000348999999873222211 1111    1  14688899887653 444

>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5

Probab=97.61  E-value=0.00055  Score=67.00  Aligned_cols=110  Identities=15%  Similarity=0.255  Sum_probs=80.0

Q ss_pred             hHHHhhhcCC----CeEEEEEeceEEEecceeEec---cCcceeeecc-ceEEeCC-------------cEEEeeeccEE
Q 016742           99 SLREGCRMKE----PLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQ-RVKLTGK-------------GLRLKECEHVI  157 (383)
Q Consensus        99 SLr~ai~~~~----Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~-gi~I~G~-------------gl~i~~a~NVI  157 (383)
                      ++++||++..    .|++|+-..|+.+  +.|.|.   +++||.|.|. ...|.+.             .|.+. +++++
T Consensus        21 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v~-a~~f~   97 (319)
T 1gq8_A           21 TVSEAVAAAPEDSKTRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAV-GAGFL   97 (319)
T ss_dssp             SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEEC-STTCE
T ss_pred             CHHHHHHhccccCCceEEEEEcCCeEe--eeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEEE-CCCEE
Confidence            6899997632    2445555679984  678884   6799999974 4455533             36775 99999


Q ss_pred             EeeeEEecCCC---CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecC
Q 016742          158 ICNLEFEGGKG---PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS  216 (383)
Q Consensus       158 IRnL~ir~g~~---~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~  216 (383)
                      ++||+|+...+   ...-||.+.  +.++.|.+|.|....|.|..-   .....+.+|.|..
T Consensus        98 ~~nlt~~Nt~g~~~~qAvAl~v~--~d~~~f~~c~f~g~QDTLy~~---~~r~~~~~c~I~G  154 (319)
T 1gq8_A           98 ARDITFQNTAGAAKHQAVALRVG--SDLSAFYRCDILAYQDSLYVH---SNRQFFINCFIAG  154 (319)
T ss_dssp             EEEEEEEECCCGGGCCCCSEEEC--CTTEEEEEEEEECSTTCEEEC---SSEEEEESCEEEE
T ss_pred             EEEeEeEccCCCcCCceEEEEec--CCcEEEEEeEECccceeeeec---CccEEEEecEEEe
Confidence            99999997543   234567774  788999999999999987653   2345888898873

>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}

Probab=97.57  E-value=0.00058  Score=66.80  Aligned_cols=109  Identities=19%  Similarity=0.307  Sum_probs=79.3

Q ss_pred             hHHHhhhcCC----CeEEEEEeceEEEecceeEec---cCcceeeecc-ceEEeCC-------------cEEEeeeccEE
Q 016742           99 SLREGCRMKE----PLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQ-RVKLTGK-------------GLRLKECEHVI  157 (383)
Q Consensus        99 SLr~ai~~~~----Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~-gi~I~G~-------------gl~i~~a~NVI  157 (383)
                      ++++||++..    .|++|+-..|+.+  +.|.|.   +++||.|.|. ...|.+.             .|.+. +++++
T Consensus        17 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v~-a~~f~   93 (317)
T 1xg2_A           17 TLAEAVAAAPDKSKTRYVIYVKRGTYK--ENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAAV-GQGFI   93 (317)
T ss_dssp             SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEEC-STTCE
T ss_pred             cHHHHHhhcccCCCceEEEEEcCCEEe--eeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEEE-CCCEE
Confidence            6899997632    2445555679984  678884   6899999974 4455543             36775 99999


Q ss_pred             EeeeEEecCCC---CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          158 ICNLEFEGGKG---PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       158 IRnL~ir~g~~---~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      ++||+|+...+   ...-||.+.  +.++.|.+|.|....|.|+.-   ...-.+.+|.|.
T Consensus        94 ~~~lt~~Nt~g~~~~qAvAl~v~--~d~~~f~~c~f~g~QDTLy~~---~~r~~~~~c~I~  149 (317)
T 1xg2_A           94 LQDICIQNTAGPAKDQAVALRVG--ADMSVINRCRIDAYQDTLYAH---SQRQFYRDSYVT  149 (317)
T ss_dssp             EESCEEEECCCGGGCCCCSEEEC--CTTEEEESCEEECSTTCEEEC---SSEEEEESCEEE
T ss_pred             EEEeEEecccCCccCceEEEEEe--CCcEEEEEeEeCccccceeec---CccEEEEeeEEE
Confidence            99999997643   234577774  788999999999999986653   234577888886

>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*

Probab=97.56  E-value=0.00018  Score=75.60  Aligned_cols=104  Identities=17%  Similarity=0.111  Sum_probs=77.9

Q ss_pred             cCcceeeeccceEEeCC---cEEEeeeccE--EEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCC
Q 016742          130 SYKTIDGRGQRVKLTGK---GLRLKECEHV--IICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRES  204 (383)
Q Consensus       130 snkTI~G~G~gi~I~G~---gl~i~~a~NV--IIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s  204 (383)
                      .|++|.|.    +|...   .+.+..|+||  .|+++++........|||.+.   +||.|.+|.|..+.| +|.++  +
T Consensus       333 ~NV~I~Gi----ti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~---~NV~I~nc~I~~gDD-cIaIk--s  402 (574)
T 1ogo_X          333 QTWYCVGP----TINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY---PNSVVHDVFWHVNDD-AIKIY--Y  402 (574)
T ss_dssp             EEEEEESC----EEECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC---TTCEEEEEEEEESSC-SEECC--S
T ss_pred             eeEEEECe----EEECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCccCccc---CCEEEEeeEEECCCC-EEEEC--C
Confidence            45666653    45543   3667789999  999999886444448999984   899999999999988 67885  4


Q ss_pred             ceEEEeCceec-CCCce-eEecCCCCCCCCcceeEEEeceeecCC
Q 016742          205 TDITVSRCHFS-SHDKT-MLIGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       205 ~~VTIS~n~f~-~H~k~-~LiG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      .||+|++|.+. .|..+ +-||++.    ....+|+|.++.+.++
T Consensus       403 ~NI~I~nc~i~~g~g~g~IsIGS~~----g~V~NV~v~N~~i~~~  443 (574)
T 1ogo_X          403 SGASVSRATIWKCHNDPIIQMGWTS----RDISGVTIDTLNVIHT  443 (574)
T ss_dssp             TTCEEEEEEEEECSSSCSEECCSSC----CCEEEEEEEEEEEEEC
T ss_pred             ccEEEEeEEEECCCCCceEEEcCCC----CcEEEEEEEeEEEECC
Confidence            99999999986 46655 6788742    1234888888888654

>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*

Probab=97.54  E-value=0.00039  Score=68.30  Aligned_cols=104  Identities=14%  Similarity=0.220  Sum_probs=77.7

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCce-EEEEceeeec----------CCCCceEeecCCceEEEeCceecC
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKH-IWIDRCSLRD----------YDDGLIDITRESTDITVSRCHFSS  216 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~n-VwIDHcs~s~----------~~Dglidi~~~s~~VTIS~n~f~~  216 (383)
                      |.+..++ |.|++|+++...   ...|.+. .+++ |.|++|++..          ..|| ||+  .+++|+|++|.|..
T Consensus       100 i~~~~~~-v~i~giti~nsp---~~~i~i~-~~~n~v~i~~v~I~~~~~d~~~~~~NtDG-idi--~s~nV~I~n~~i~~  171 (335)
T 1k5c_A          100 FLKIKGS-GTYKKFEVLNSP---AQAISVG-PTDAHLTLDGITVDDFAGDTKNLGHNTDG-FDV--SANNVTIQNCIVKN  171 (335)
T ss_dssp             SEEEEEE-EEEESCEEESCS---SCCEEEE-EEEEEEEEESCEEECGGGGGGGCCCSCCS-EEE--ECSSEEEESCEEES
T ss_pred             EEEeceE-EEEEEEEEECCC---cceEEEE-ccCCeEEEEEEEEECCCCcccccCCCCCe-Ecc--cCCeEEEEeeEEEc
Confidence            6777788 999999999864   3578887 7899 9999999964          3688 788  68999999999998


Q ss_pred             CCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccc----cC---eeEEEcceEEcc
Q 016742          217 HDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR----YA---KVHLYNNYTRNW  269 (383)
Q Consensus       217 H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r----~G---~~hv~NN~~~n~  269 (383)
                      .+-+.-|++.        .+|++.++.+.....  =.+.    .+   .+.+.|+.+.+.
T Consensus       172 gDDcIaiksg--------~nI~i~n~~~~~ghG--isIGS~g~~~~v~nV~v~n~~~~~t  221 (335)
T 1k5c_A          172 QDDCIAINDG--------NNIRFENNQCSGGHG--ISIGSIATGKHVSNVVIKGNTVTRS  221 (335)
T ss_dssp             SSCSEEEEEE--------EEEEEESCEEESSCC--EEEEEECTTCEEEEEEEESCEEEEE
T ss_pred             CCCEEEeeCC--------eeEEEEEEEEECCcc--CeEeeccCCCCEEEEEEEeeEEECC
Confidence            7766666653        379999988866332  1221    11   356777777654

>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A

Probab=97.48  E-value=0.0024  Score=63.41  Aligned_cols=139  Identities=14%  Similarity=0.211  Sum_probs=89.2

Q ss_pred             CCceEecCCCceEEEEceeeec-------CCCCceEeecCCceEEEeCceecCCCceeE-ecCCCCCCCCcceeEEEece
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRD-------YDDGLIDITRESTDITVSRCHFSSHDKTML-IGADPSHVADRCIRVTIHHC  242 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~-------~~Dglidi~~~s~~VTIS~n~f~~H~k~~L-iG~~d~~~~d~~~~VT~hhN  242 (383)
                      +.+|.|..+++||+|.++.|..       ..|+ |.+ .++++|-|-+|.|+.-...++ .|..      ....||+-+|
T Consensus       123 G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~Da-I~i-~~s~nVwIDHcs~s~~~d~~~~~g~~------~s~~VTISnn  194 (359)
T 1idk_A          123 GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDA-ITL-DDCDLVWIDHVTTARIGRQHYVLGTS------ADNRVSLTNN  194 (359)
T ss_dssp             SCCEEECTTCEEEEEESCEEEEECTTEETSCCS-EEE-CSCEEEEEESCEEEEESSCSEEECCC------TTCEEEEESC
T ss_pred             cceEEEecCCCcEEEeCeEEEcccccccccCCc-eee-cCCCcEEEEeeEeecCCCCcEEeccc------CcceEEEECc
Confidence            4578885358999999999985       4576 667 468999999999984322222 2211      1238999999


Q ss_pred             eecCCCCcCC--------ccc-cC---eeEEEcceEEccccceeeecCCceEEEEceEEecCCccceeeeeccccCCccc
Q 016742          243 FFDGTRQRHP--------RVR-YA---KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEE  310 (383)
Q Consensus       243 ~f~~~~~R~P--------r~r-~G---~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~  310 (383)
                      +|.+.....-        ..- .|   .+.+.+|+|.+.....-..+.+..+.+.||||..-..-.   +        ..
T Consensus       195 ~f~~~~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r~g~~~hv~NN~~~n~~~~~---i--------~~  263 (359)
T 1idk_A          195 YIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQDNTLLHAVNNYWYDISGHA---F--------EI  263 (359)
T ss_dssp             EEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEECTTCEEEEESCEEEEEEEEE---E--------EE
T ss_pred             EecCCcccccccCccccceEEEEecCCCeEEEceEeecCcccCccccCCceEEEECCEEecccceE---E--------ec
Confidence            9985432111        111 12   689999999987655434444446888999998632111   1        01


Q ss_pred             cCcceEEecCCEEEcccc
Q 016742          311 ARSGCIRSEGDLFITGTQ  328 (383)
Q Consensus       311 ~~~g~~~~~gn~~~nG~~  328 (383)
                      .....+..++|+|.++..
T Consensus       264 ~~~~~i~~e~N~F~~~~~  281 (359)
T 1idk_A          264 GEGGYVLAEGNVFQNVDT  281 (359)
T ss_dssp             CTTCEEEEESCEEEEEEE
T ss_pred             cCCcEEEEEccEEECCCC
Confidence            123466778888887654

>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*

Probab=97.33  E-value=0.0025  Score=66.03  Aligned_cols=142  Identities=16%  Similarity=0.136  Sum_probs=72.5

Q ss_pred             cEEEeeeccEEEeeeEEecCCCCCCCceEec-------CCCceEEEEceeeecCCC-Cc-------eEeec------CCc
Q 016742          147 GLRLKECEHVIICNLEFEGGKGPDVDAIQIK-------PKSKHIWIDRCSLRDYDD-GL-------IDITR------EST  205 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~-------~~s~nVwIDHcs~s~~~D-gl-------idi~~------~s~  205 (383)
                      ++.+. ++++.|+|.+|++...  .|.+.+.       -.+++..|+||.|....+ |.       +.+..      .+.
T Consensus       120 ~iav~-G~~~~I~nn~I~~~~~--gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~  196 (506)
T 1dbg_A          120 LVAIY-GSYNRITACVFDCFDE--ANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGM  196 (506)
T ss_dssp             SEEEC-SSSCEEESCEEESCCS--SCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCC
T ss_pred             ceEEe-cCCeEEEeeEEEcCCC--CceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccC
Confidence            34554 5889999999987532  1223332       124556788888876322 11       22222      135


Q ss_pred             eEEEeCceecCCC------ceeEecCCCCCCC------------Ccc--------eeEEEeceeecCCCCcCCccccC-e
Q 016742          206 DITVSRCHFSSHD------KTMLIGADPSHVA------------DRC--------IRVTIHHCFFDGTRQRHPRVRYA-K  258 (383)
Q Consensus       206 ~VTIS~n~f~~H~------k~~LiG~~d~~~~------------d~~--------~~VT~hhN~f~~~~~R~Pr~r~G-~  258 (383)
                      +..|.+|+|....      ..+-+|.+.....            ++.        -+.+|.+|.|.++.. .=.++.+ .
T Consensus       197 ~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~~g-gi~l~~~~~  275 (506)
T 1dbg_A          197 YHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQG-TMNFRHGDH  275 (506)
T ss_dssp             CCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESCSS-EEEEEECSS
T ss_pred             CeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcccC-cEEEeecCc
Confidence            7778888887432      2233342110000            000        024566666655422 2223433 3


Q ss_pred             eEEEcceEEccc----cceeeecCCceEEEEceEEecCC
Q 016742          259 VHLYNNYTRNWG----IYAVCASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       259 ~hv~NN~~~n~~----~~a~~~~~~a~i~~e~Nyf~~g~  293 (383)
                      ..|.+|++.+-+    ..++... ++...+.+|||+.-.
T Consensus       276 s~I~~N~f~gN~~~~~~~Gi~i~-~~~~~I~nN~f~~~~  313 (506)
T 1dbg_A          276 QVAINNFYIGNDQRFGYGGMFVW-GSRHVIACNYFELSE  313 (506)
T ss_dssp             CEEESCEEEECSSSSCBCCEEEC-SBSCEEESCEEEESS
T ss_pred             cEEECCEEECCcCccCceEEEEE-CCCCEEECCEEECCc
Confidence            578888886543    1233332 334477899998754

>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}

Probab=97.31  E-value=0.0061  Score=60.67  Aligned_cols=112  Identities=18%  Similarity=0.263  Sum_probs=79.0

Q ss_pred             hHHHhhhcCCC---eEEEEEeceEEEecceeEec-cCcceeeecc-ceEEeC-------------------CcEEEeeec
Q 016742           99 SLREGCRMKEP---LWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQ-RVKLTG-------------------KGLRLKECE  154 (383)
Q Consensus        99 SLr~ai~~~~P---r~IVf~vsG~I~l~~~l~V~-snkTI~G~G~-gi~I~G-------------------~gl~i~~a~  154 (383)
                      ++++||++..+   +.+|+-..|+.  ++.|.|. +++||.|.|. ...|.+                   ..|.+. ++
T Consensus        46 TIq~Ai~aa~~~~~~~~I~I~~G~Y--~E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V~-a~  122 (364)
T 3uw0_A           46 SINAALKSAPKDDTPFIIFLKNGVY--TERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLVN-AP  122 (364)
T ss_dssp             CHHHHHHHSCSSSSCEEEEECSEEE--CCCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEEC-ST
T ss_pred             cHHHHHhhcccCCCcEEEEEeCCEE--EEEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEEE-CC
Confidence            58899876332   34555567888  4567786 6799999974 344543                   235665 89


Q ss_pred             cEEEeeeEEecCCC-----------------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          155 HVIICNLEFEGGKG-----------------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       155 NVIIRnL~ir~g~~-----------------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      +++++||+|+....                 ...-||.+...+.++.+.+|.|....|.|++-  .....-+.+|.|.
T Consensus       123 ~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~--~~gr~yf~~c~I~  198 (364)
T 3uw0_A          123 NFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSK--TGSRSYFSDCEIS  198 (364)
T ss_dssp             TCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEEC--TTCEEEEESCEEE
T ss_pred             CEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeC--CCCCEEEEcCEEE
Confidence            99999999996531                 12346666435789999999999999997653  2457778888886

>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*

Probab=97.27  E-value=0.0069  Score=59.45  Aligned_cols=140  Identities=18%  Similarity=0.209  Sum_probs=88.9

Q ss_pred             CCcEEEee-eccEEEeeeEEecCC--C---CCCCc-eEecCCCceEEEEceeeecCCCCceEeecC-----CceEEEeCc
Q 016742          145 GKGLRLKE-CEHVIICNLEFEGGK--G---PDVDA-IQIKPKSKHIWIDRCSLRDYDDGLIDITRE-----STDITVSRC  212 (383)
Q Consensus       145 G~gl~i~~-a~NVIIRnL~ir~g~--~---~d~Da-I~i~~~s~nVwIDHcs~s~~~Dglidi~~~-----s~~VTIS~n  212 (383)
                      +.+|.|.. ++||+|.|..|..+.  .   ...|+ |.+..++++|=|-+|-|.+...++|--..+     ..+||+-+|
T Consensus       120 ~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~~~~~vT~~~N  199 (326)
T 3vmv_A          120 GTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASLAPDKITYHHN  199 (326)
T ss_dssp             SCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGGCCEEEEEESC
T ss_pred             CCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCcccCccEEEEee
Confidence            45688885 899999999997542  1   11344 466556889999999998755454422111     137999999


Q ss_pred             eecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEccc-----------cceee----
Q 016742          213 HFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNWG-----------IYAVC----  275 (383)
Q Consensus       213 ~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~~-----------~~a~~----  275 (383)
                      +|.+..- .-++..         -.+-+.+|+|.+...+.-..+. +++-+.||||.+.+           ...+.    
T Consensus       200 ~f~~~~~R~Pr~r~---------G~~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~  270 (326)
T 3vmv_A          200 YFNNLNSRVPLIRY---------ADVHMFNNYFKDINDTAINSRVGARVFVENNYFDNVGSGQADPTTGFIKGPVGWFYG  270 (326)
T ss_dssp             EEEEEEECTTEEES---------CEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEESCCSBCTTTCCBCSSEECCSC
T ss_pred             EecCCcCcCCcccC---------CcEEEEccEEECCCceEEeecCCcEEEEEceEEECCcCccccccccccccceeeccC
Confidence            9964211 112221         1466788999887665544443 57899999999872           11121    


Q ss_pred             ecCCceEEEEceEEecCC
Q 016742          276 ASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       276 ~~~~a~i~~e~Nyf~~g~  293 (383)
                      ....+....++|.|.+..
T Consensus       271 s~~~g~~~~~~n~~~n~~  288 (326)
T 3vmv_A          271 SPSTGYWNLRGNVFVNTP  288 (326)
T ss_dssp             SSSBCEEEEESCEEESSC
T ss_pred             CCCceEEEEECCeEccCc
Confidence            223345667899998653

>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*

Probab=97.22  E-value=0.001  Score=69.64  Aligned_cols=104  Identities=10%  Similarity=0.078  Sum_probs=74.5

Q ss_pred             CcceeeeccceEEeCCc---EEEee-e-cc--EEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecC
Q 016742          131 YKTIDGRGQRVKLTGKG---LRLKE-C-EH--VIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRE  203 (383)
Q Consensus       131 nkTI~G~G~gi~I~G~g---l~i~~-a-~N--VIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~  203 (383)
                      |++|.|    ++|....   +.|.. + +|  |.|+++++........|||.+.   +||.|++|.|..+.| +|.++. 
T Consensus       294 nV~I~G----iti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~---~nV~I~n~~i~~gDD-cIaIks-  364 (549)
T 1x0c_A          294 TFVLNG----VTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY---PGTILQDVFYHTDDD-GLKMYY-  364 (549)
T ss_dssp             EEEEES----CEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC---TTCEEEEEEEEESSC-CEECCS-
T ss_pred             EEEEEC----cEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc---CCEEEEeeEEeCCCC-EEEECC-
Confidence            455554    3455432   44333 4 59  9999999976444457999884   899999999999988 588864 


Q ss_pred             CceEEEeCceec-CCCce-eEecCCCCCCCCcceeEEEeceeecCCC
Q 016742          204 STDITVSRCHFS-SHDKT-MLIGADPSHVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       204 s~~VTIS~n~f~-~H~k~-~LiG~~d~~~~d~~~~VT~hhN~f~~~~  248 (383)
                       .||+|++|.+. .|.-+ +-||+..    +...+|+|.++.+.++.
T Consensus       365 -~NI~I~n~~~~~~~g~~~IsiGs~~----~~V~NV~v~n~~i~~s~  406 (549)
T 1x0c_A          365 -SNVTARNIVMWKESVAPVVEFGWTP----RNTENVLFDNVDVIHQA  406 (549)
T ss_dssp             -SSEEEEEEEEEECSSSCSEECCBSC----CCEEEEEEEEEEEEECC
T ss_pred             -CCEEEEeeEEEcCCCCceEEECCCC----CcEEEEEEEeeEEECcc
Confidence             99999999996 45555 6688742    22348898888886653

>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*

Probab=97.19  E-value=0.0019  Score=67.91  Aligned_cols=76  Identities=11%  Similarity=0.078  Sum_probs=61.1

Q ss_pred             eeccEEEeeeEEecCCCCCCCceEecCCCceE--EEEceeee----cCCCCceEeecCCceEEEeCceecCCCceeEecC
Q 016742          152 ECEHVIICNLEFEGGKGPDVDAIQIKPKSKHI--WIDRCSLR----DYDDGLIDITRESTDITVSRCHFSSHDKTMLIGA  225 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nV--wIDHcs~s----~~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~  225 (383)
                      +|+||.|++|+|+....   -.|.+. .+++|  .|+.+++.    +..|| ||+.   ++|+|++|.|...+-++-|++
T Consensus       331 ~c~NV~I~Giti~NSp~---w~i~~~-~c~nV~~~I~nv~i~~~~~~nTDG-IDi~---~NV~I~nc~I~~gDDcIaIks  402 (574)
T 1ogo_X          331 GGQTWYCVGPTINAPPF---NTMDFN-GNSGISSQISDYKQVGAFFFQTDG-PEIY---PNSVVHDVFWHVNDDAIKIYY  402 (574)
T ss_dssp             SSEEEEEESCEEECCSS---CSEEEC-SSSCEEEEEEEEEEECCCSTTCCC-CBCC---TTCEEEEEEEEESSCSEECCS
T ss_pred             CceeEEEECeEEECCCC---cEEeec-CCCChhhEEEeeEeeCCCCCCCcc-Cccc---CCEEEEeeEEECCCCEEEECC
Confidence            79999999999998643   457786 79999  99999864    34899 7885   899999999998887887776


Q ss_pred             CCCCCCCcceeEEEeceee
Q 016742          226 DPSHVADRCIRVTIHHCFF  244 (383)
Q Consensus       226 ~d~~~~d~~~~VT~hhN~f  244 (383)
                      .         +|++.+|.+
T Consensus       403 ~---------NI~I~nc~i  412 (574)
T 1ogo_X          403 S---------GASVSRATI  412 (574)
T ss_dssp             T---------TCEEEEEEE
T ss_pred             c---------cEEEEeEEE
Confidence            2         466766654

>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9

Probab=97.18  E-value=0.0092  Score=59.99  Aligned_cols=117  Identities=12%  Similarity=0.093  Sum_probs=62.4

Q ss_pred             CCceEecC-CCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCc-------------eeEecCCCCCCCCccee
Q 016742          171 VDAIQIKP-KSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDK-------------TMLIGADPSHVADRCIR  236 (383)
Q Consensus       171 ~DaI~i~~-~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k-------------~~LiG~~d~~~~d~~~~  236 (383)
                      .|||.+.. ......|.+|.+.+..|.-+|+......|||.+|+..+..+             ++-+|+..     ...+
T Consensus       183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~-----~~~~  257 (400)
T 1ru4_A          183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQ-----AVGN  257 (400)
T ss_dssp             CCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTT-----CCCC
T ss_pred             cceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECCccccccccccccCCCCEEEeccC-----CcCC
Confidence            35555431 12344555666655444346665545567888887754332             12222110     0124


Q ss_pred             EEEeceeecCCCCcCCcccc--CeeEEEcceEEccccceeeecCCc----eEEEEceEEecCC
Q 016742          237 VTIHHCFFDGTRQRHPRVRY--AKVHLYNNYTRNWGIYAVCASVDS----QIYSQCNIYEAGQ  293 (383)
Q Consensus       237 VT~hhN~f~~~~~R~Pr~r~--G~~hv~NN~~~n~~~~a~~~~~~a----~i~~e~Nyf~~g~  293 (383)
                      .++.+|+..++...-=....  +.+.|.||..++-+ .++......    ...+++|.+....
T Consensus       258 ~~v~nn~a~~N~~~G~~~n~~~~~~~i~nNt~~~N~-~~~~~~~~~~~~~~~~~~nNi~~~~~  319 (400)
T 1ru4_A          258 HRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKNG-INYGFGSNVQSGQKHYFRNNVSLSAS  319 (400)
T ss_dssp             CEEESCEEESCSSEEEECTTCSSCCEEESCEEESSS-EEEEECSCCCTTCCEEEESCEEESSC
T ss_pred             EEEEeeEEECCcCcCEeecCCCCCEEEECeEEECCc-cceEEecCCCcccceEEEccEEEccc
Confidence            67777776655433222222  45789999877665 455544332    5567888887653

>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A

Probab=97.13  E-value=0.012  Score=62.14  Aligned_cols=86  Identities=21%  Similarity=0.146  Sum_probs=61.7

Q ss_pred             eccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCC----CCceEeecCCceEEEeCceecCCCceeEecCCCC
Q 016742          153 CEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYD----DGLIDITRESTDITVSRCHFSSHDKTMLIGADPS  228 (383)
Q Consensus       153 a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~----Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~  228 (383)
                      ++||.|+|.+|+..   .+|+|.|. .++||+|.+|.+....    ..-|.+..++.+|||++|.|.+-..++.|-....
T Consensus       182 S~NV~I~Nc~I~~t---GDDcIaIk-sseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~  257 (609)
T 3gq8_A          182 SENIWIENCEATGF---GDDGITTH-HSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGD  257 (609)
T ss_dssp             CEEEEEESCEEESC---SSCSEEEC-SCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECTT
T ss_pred             ceeEEEEeeEEEec---CCCEEEec-CCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecCC
Confidence            89999999999742   36999996 7999999999995431    2236776667899999999998877776653321


Q ss_pred             CCCCcceeEEEeceee
Q 016742          229 HVADRCIRVTIHHCFF  244 (383)
Q Consensus       229 ~~~d~~~~VT~hhN~f  244 (383)
                      ..  ...+|.|.+|++
T Consensus       258 ~~--~v~NV~I~n~vs  271 (609)
T 3gq8_A          258 AP--AAYNISINGHMS  271 (609)
T ss_dssp             SC--CCEEEEEEEEEE
T ss_pred             CC--ccccEEEECCEe
Confidence            10  123677766644

>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*

Probab=97.05  E-value=0.0033  Score=65.79  Aligned_cols=102  Identities=11%  Similarity=0.125  Sum_probs=71.2

Q ss_pred             eeeccEEEeeeEEecCCCCCCCceEecCCC-ce--EEEEceeee----cCCCCceEeecCCceEEEeCceecCCCceeEe
Q 016742          151 KECEHVIICNLEFEGGKGPDVDAIQIKPKS-KH--IWIDRCSLR----DYDDGLIDITRESTDITVSRCHFSSHDKTMLI  223 (383)
Q Consensus       151 ~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s-~n--VwIDHcs~s----~~~Dglidi~~~s~~VTIS~n~f~~H~k~~Li  223 (383)
                      .+|+||.|++|+++....+   .|.|...+ ++  |.||++++.    |..|| ||+.   ++|+|++|.|...+-+.-|
T Consensus       290 ~~c~nV~I~Giti~Nsp~w---~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDG-idi~---~nV~I~n~~i~~gDDcIaI  362 (549)
T 1x0c_A          290 NSSQTFVLNGVTVSAPPFN---SMDWSGNSLDLITCRVDDYKQVGAFYGQTDG-LEMY---PGTILQDVFYHTDDDGLKM  362 (549)
T ss_dssp             SSCEEEEEESCEEECCSSC---SEEEECSCGGGEEEEEEEEEEECCCBTTCCC-CBCC---TTCEEEEEEEEESSCCEEC
T ss_pred             CCceEEEEECcEEECCCce---eEEeeccCCCCCeEEEEeeEeEcCCCCCCCc-cccc---CCEEEEeeEEeCCCCEEEE
Confidence            6799999999999976432   35543235 68  999999974    45899 7885   8999999999987777777


Q ss_pred             cCCCCCCCCcceeEEEeceeecCCCCcCCccccC-------eeEEEcceEEcc
Q 016742          224 GADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYA-------KVHLYNNYTRNW  269 (383)
Q Consensus       224 G~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G-------~~hv~NN~~~n~  269 (383)
                      ++         .+|++.+|.+... ...+++..|       .+.|.|..+.+.
T Consensus       363 ks---------~NI~I~n~~~~~~-~g~~~IsiGs~~~~V~NV~v~n~~i~~s  405 (549)
T 1x0c_A          363 YY---------SNVTARNIVMWKE-SVAPVVEFGWTPRNTENVLFDNVDVIHQ  405 (549)
T ss_dssp             CS---------SSEEEEEEEEEEC-SSSCSEECCBSCCCEEEEEEEEEEEEEC
T ss_pred             CC---------CCEEEEeeEEEcC-CCCceEEECCCCCcEEEEEEEeeEEECc
Confidence            76         2688888876321 122322222       367777777653

>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}

Probab=97.04  E-value=0.0047  Score=60.53  Aligned_cols=94  Identities=14%  Similarity=0.158  Sum_probs=67.7

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeec-------CCceEEEeCceecCC
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR-------ESTDITVSRCHFSSH  217 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~-------~s~~VTIS~n~f~~H  217 (383)
                      ..||.+..++||.|+|.+|+.+    +|+|.|. .++||+|.+|.+..+. | |.+..       ...+|+|++|.|.+.
T Consensus       154 tDGid~~~s~nV~I~n~~i~~g----DDciaik-sg~nI~i~n~~~~~gh-G-isiGSlg~~~~~~v~nV~v~n~~~~~~  226 (339)
T 2iq7_A          154 TDAFDVGSSTGVYISGANVKNQ----DDCLAIN-SGTNITFTGGTCSGGH-G-LSIGSVGGRSDNTVKTVTISNSKIVNS  226 (339)
T ss_dssp             CCSEEEESCEEEEEESCEEECS----SCSEEES-SEEEEEEESCEEESSC-C-EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred             CCcEEEcCcceEEEEecEEecC----CCEEEEc-CCccEEEEeEEEECCc-e-EEECcCCcccCCCEEEEEEEeeEEECC
Confidence            3479998899999999999864    5999997 6799999999999865 6 66632       257999999999887


Q ss_pred             CceeEecCCCCCCCCcceeEEEeceeecC
Q 016742          218 DKTMLIGADPSHVADRCIRVTIHHCFFDG  246 (383)
Q Consensus       218 ~k~~LiG~~d~~~~d~~~~VT~hhN~f~~  246 (383)
                      ..++.|....... ....+|+|.+..+.+
T Consensus       227 ~~girIkt~~g~~-G~v~nI~~~ni~~~~  254 (339)
T 2iq7_A          227 DNGVRIKTVSGAT-GSVSGVTYSGITLSN  254 (339)
T ss_dssp             SEEEEEEEETTCC-CEEEEEEEEEEEEEE
T ss_pred             CcEEEEEEeCCCC-eEEEEEEEEeEEccC
Confidence            7766664321110 011356666655544

>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*

Probab=96.94  E-value=0.029  Score=55.59  Aligned_cols=142  Identities=14%  Similarity=0.100  Sum_probs=87.3

Q ss_pred             CCceEecCCCceEEEEceeeec------CCCCceEeecCCceEEEeCceecCCCc-ee--EecC--CCCC--CCCcceeE
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRD------YDDGLIDITRESTDITVSRCHFSSHDK-TM--LIGA--DPSH--VADRCIRV  237 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~------~~Dglidi~~~s~~VTIS~n~f~~H~k-~~--LiG~--~d~~--~~d~~~~V  237 (383)
                      +-+|.|. +++||+|.+..|..      ..|+ |.+. ++++|=|-+|.|+.... ++  .-+.  .|..  .....-+|
T Consensus       102 g~gl~i~-~~~NVIIrnl~i~~~~~~~~~~Da-I~i~-~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~V  178 (353)
T 1air_A          102 NFGIWIK-KSSDVVVQNMRIGYLPGGAKDGDM-IRVD-DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTV  178 (353)
T ss_dssp             SSEEEEE-SCCSEEEESCEEESCSCGGGTCCS-EEEE-SCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEE
T ss_pred             CceEEEe-ccCcEEEeccEEEeCCCCCCCCCe-EEee-CCCcEEEEeeEEecCCcccccccccccccccceeeecccCcE
Confidence            4578886 78999999999984      3466 6774 68999999999873210 00  0000  0100  00112389


Q ss_pred             EEeceeecCCCCcCCcccc------CeeEEEcceEEccccceeeecCCceEEEEceEEecCCccceeeeeccccCCcccc
Q 016742          238 TIHHCFFDGTRQRHPRVRY------AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEA  311 (383)
Q Consensus       238 T~hhN~f~~~~~R~Pr~r~------G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~~  311 (383)
                      |+-+|+|.++.. .=.+..      -++.+.+|+|.+.....-..+ ...+.+.||||..-.....           ...
T Consensus       179 TISnn~f~~h~k-~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r-~G~~Hv~NN~~~n~~~~~~-----------~~~  245 (353)
T 1air_A          179 TVSYNYIHGVKK-VGLDGSSSSDTGRNITYHHNYYNDVNARLPLQR-GGLVHAYNNLYTNITGSGL-----------NVR  245 (353)
T ss_dssp             EEESCEEEEEEE-CCEESSSTTCCCCEEEEESCEEEEEEECSCEEE-SSEEEEESCEEEEESSCSE-----------EEE
T ss_pred             EEEeeEEcCCCc-eeEECCCcCCCCceEEEEceEEcCCcCCCCCCc-CceEEEEccEEECCCCcee-----------ccC
Confidence            999999985431 111111      258999999987654433333 3578889999986432111           112


Q ss_pred             CcceEEecCCEEEcccc
Q 016742          312 RSGCIRSEGDLFITGTQ  328 (383)
Q Consensus       312 ~~g~~~~~gn~~~nG~~  328 (383)
                      ..+.+..++|+|.++..
T Consensus       246 ~~~~i~~e~N~F~~~~~  262 (353)
T 1air_A          246 QNGQALIENNWFEKAIN  262 (353)
T ss_dssp             TTCEEEEESCEEEEEES
T ss_pred             CCcEEEEEceEEECCCC
Confidence            34567889999998754

>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1

Probab=96.85  E-value=0.042  Score=54.39  Aligned_cols=146  Identities=21%  Similarity=0.167  Sum_probs=86.0

Q ss_pred             CceEecCCCceEEEEceeeecC----------------CCCceEeecCCceEEEeCceecCC-----CceeEecCC----
Q 016742          172 DAIQIKPKSKHIWIDRCSLRDY----------------DDGLIDITRESTDITVSRCHFSSH-----DKTMLIGAD----  226 (383)
Q Consensus       172 DaI~i~~~s~nVwIDHcs~s~~----------------~Dglidi~~~s~~VTIS~n~f~~H-----~k~~LiG~~----  226 (383)
                      -+|.|. +++||+|.+..|...                .| .|.+ .++++|=|-+|.|+..     ....++|..    
T Consensus        96 ~gl~i~-~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~D-aI~i-~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~  172 (355)
T 1pcl_A           96 GSLVIK-GVKNVILRNLYIETPVDVAPHYESGDGWNAEWD-AAVI-DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQH  172 (355)
T ss_pred             CEEEEe-cCCeEEEeeeEEEcCcccccccccccCccccCc-eEEe-cCCCcEEEEeeEEeccccCccccccccCcccccc
Confidence            467776 789999999999843                23 3666 4577887777777631     122334432    


Q ss_pred             CCC--CCCcceeEEEeceeecCCCCcCCcccc---------C--eeEEEcceEEccccceeeecCCceEEEEceEEecCC
Q 016742          227 PSH--VADRCIRVTIHHCFFDGTRQRHPRVRY---------A--KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       227 d~~--~~d~~~~VT~hhN~f~~~~~R~Pr~r~---------G--~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~  293 (383)
                      |..  .....-.||+-+|+|.++.. .=.+..         |  ++.+.+|+|.+.....-..+. ..+.+.||||.+..
T Consensus       173 Dgl~Di~~~s~~VTiS~n~f~~h~k-~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR~-G~~Hv~NN~~~~~~  250 (355)
T 1pcl_A          173 DGALDIKKGSDYVTISYSRFELHDK-TILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRF-GSIHAYNNVYLGDV  250 (355)
T ss_pred             ccceeeecCCCcEEEEeeEEcCCCc-eEEeCCCCCCcccccCcceEEEECcEEeCCcccCCceec-ceEEEEcceEEccc
Confidence            110  11112489999999987542 111110         2  589999999887654433332 35788899997643


Q ss_pred             ccceeeeeccccCCccccCcceEEecCCEEEcc
Q 016742          294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITG  326 (383)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG  326 (383)
                      .-.++.+...    ........+..++|+|.++
T Consensus       251 ~~~~~~~~ya----~g~~~~~~i~~e~N~F~~~  279 (355)
T 1pcl_A          251 KHSVYPYLYS----FGLGTSGSILSESNSFTLS  279 (355)
T ss_pred             CCCccccceE----ecCCCCcEEEEEccEEECC
Confidence            2111000000    0112345678899999987

>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*

Probab=96.80  E-value=0.0085  Score=58.73  Aligned_cols=73  Identities=12%  Similarity=0.184  Sum_probs=59.2

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeec-------CCceEEEeCceecCC
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR-------ESTDITVSRCHFSSH  217 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~-------~s~~VTIS~n~f~~H  217 (383)
                      ..||.+..++||.|+|-+|+.+    +|+|.|. .++||+|.+|.+..+. | |.+..       ...+|+|++|.|.+.
T Consensus       158 tDGid~~~s~nV~I~n~~i~~g----DDcIaik-sg~nI~i~n~~~~~gh-G-isiGS~g~~~~~~v~nV~v~n~~~~~t  230 (339)
T 1ia5_A          158 TDAFDIGTSTYVTISGATVYNQ----DDCVAVN-SGENIYFSGGYCSGGH-G-LSIGSVGGRSDNTVKNVTFVDSTIINS  230 (339)
T ss_dssp             CCSEEEESCEEEEEESCEEECS----SCSEEES-SEEEEEEESCEEESSS-C-EEEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred             CCcEEecCCceEEEEeeEEEcC----CCeEEEe-CCeEEEEEeEEEECCc-e-EEECcCCcccCCCEEEEEEEeeEEECC
Confidence            4569998899999999999864    5999997 5799999999999765 5 66622       257999999999987


Q ss_pred             CceeEec
Q 016742          218 DKTMLIG  224 (383)
Q Consensus       218 ~k~~LiG  224 (383)
                      ..++.|-
T Consensus       231 ~~girIK  237 (339)
T 1ia5_A          231 DNGVRIK  237 (339)
T ss_dssp             SEEEEEE
T ss_pred             CcEEEEE
Confidence            7666554

>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A

Probab=96.75  E-value=0.046  Score=54.25  Aligned_cols=147  Identities=20%  Similarity=0.231  Sum_probs=86.0

Q ss_pred             CceEe---cCCCceEEEEceeeecC----------------CCCceEeecCCceEEEeCceecCC---C--ceeEecCC-
Q 016742          172 DAIQI---KPKSKHIWIDRCSLRDY----------------DDGLIDITRESTDITVSRCHFSSH---D--KTMLIGAD-  226 (383)
Q Consensus       172 DaI~i---~~~s~nVwIDHcs~s~~----------------~Dglidi~~~s~~VTIS~n~f~~H---~--k~~LiG~~-  226 (383)
                      -+|.|   . +++||+|-+..|...                .|+ |.+..++++|=|-+|.|+..   +  ...++|.. 
T Consensus       103 ~gl~i~~~~-~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~Da-I~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~  180 (361)
T 1pe9_A          103 GSLIIDGTD-GTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDA-MNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETY  180 (361)
T ss_dssp             SEEEEEGGG-TCEEEEEESCEEECCCCSSCEEETTTEEECCCCS-EEEETTCEEEEEESCEEECTTSCGGGCCEETTEEC
T ss_pred             CEEEEecCC-CCceEEEeCeEEEcCcccccccccccCcccCCce-EEeecCCceEEEEccEeecccccccccccccCcce
Confidence            46777   5 689999999999843                243 67754388888888888742   1  12233321 


Q ss_pred             ---CCC--CCCcceeEEEeceeecCCCCcCCccc-----------cCeeEEEcceEEccccceeeecCCceEEEEceEEe
Q 016742          227 ---PSH--VADRCIRVTIHHCFFDGTRQRHPRVR-----------YAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYE  290 (383)
Q Consensus       227 ---d~~--~~d~~~~VT~hhN~f~~~~~R~Pr~r-----------~G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~  290 (383)
                         |..  .....-.||+-+|+|.++.. .=.+.           .-++.+.+|+|.+.....=..+. .++.+.||||.
T Consensus       181 ~~~DgllDi~~~s~~VTiS~n~f~~h~k-~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~R~-G~~Hv~NN~~~  258 (361)
T 1pe9_A          181 VQHDGALDIKRGSDYVTISNSLIDQHDK-TMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVRY-GSIHSFNNVFK  258 (361)
T ss_dssp             CCCCCSEEECTTCEEEEEESCEEEEEEE-CEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEESS-CEEEEESCEEE
T ss_pred             eeccceeeeecCCCcEEEEeeEEcCCCc-eeEecCCCCCcccccCcceEEEECeEEcCccccCccccc-ceEEEEcceEe
Confidence               110  11122489999999976431 11111           12589999999876544433332 35888999997


Q ss_pred             cCCccceeeeeccccCCccccCcceEEecCCEEEcc
Q 016742          291 AGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITG  326 (383)
Q Consensus       291 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG  326 (383)
                      ......++.+..  +  ......+.+..++|+|.++
T Consensus       259 ~~~~~~~~~~~y--a--~g~~~~~~i~~E~N~F~~~  290 (361)
T 1pe9_A          259 GDAKDPVYRYQY--S--FGIGTSGSVLSEGNSFTIA  290 (361)
T ss_dssp             EETTCSSSCCCC--S--EEECTTCEEEEESCEEEEE
T ss_pred             cccCCCccccce--E--ecCCCCcEEEEECCEEECC
Confidence            532211100000  0  0112345778899999987

>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*

Probab=96.65  E-value=0.027  Score=54.89  Aligned_cols=112  Identities=10%  Similarity=0.116  Sum_probs=71.5

Q ss_pred             CcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEee------cCCceEEEeCceecCC-C
Q 016742          146 KGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDIT------RESTDITVSRCHFSSH-D  218 (383)
Q Consensus       146 ~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~------~~s~~VTIS~n~f~~H-~  218 (383)
                      .||.+..+++++|++=++...   ..|||.+...+++++|.+|.+....|+.+-+.      ..+.+++|++|.+... .
T Consensus       173 dGI~~~~s~~~~i~~N~~~~~---~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~  249 (377)
T 2pyg_A          173 DGFVADYLVDSVFENNVAYAN---DRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAR  249 (377)
T ss_dssp             CSEEEESEEEEEEESCEEESC---SSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSS
T ss_pred             CceeEeccCCcEEECcEEEcc---ccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCcc
Confidence            467777777777776544332   25899876348899999999998877765431      3577899999987642 3


Q ss_pred             ceeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEc
Q 016742          219 KTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRN  268 (383)
Q Consensus       219 k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n  268 (383)
                      .+.++-.        ..++++.+|.|.++....=++.. -.+.+.||.+.+
T Consensus       250 ~Gi~~~~--------~~~v~i~~N~i~~~~~~GI~i~g~~~~~i~~N~i~~  292 (377)
T 2pyg_A          250 EGVLLKM--------TSDITLQNADIHGNGSSGVRVYGAQDVQILDNQIHD  292 (377)
T ss_dssp             CSEEEEE--------EEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEES
T ss_pred             CceEecc--------ccCeEEECCEEECCCCceEEEecCCCcEEECcEEEC
Confidence            3433321        12677788877766433333321 245677777764

>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A

Probab=96.61  E-value=0.037  Score=54.24  Aligned_cols=136  Identities=15%  Similarity=0.152  Sum_probs=84.8

Q ss_pred             CCcEEEe-----eeccEEEeeeEEecCC----C---CCCCc-eEecCCCceEEEEceeeecCCCCceEeecC------Cc
Q 016742          145 GKGLRLK-----ECEHVIICNLEFEGGK----G---PDVDA-IQIKPKSKHIWIDRCSLRDYDDGLIDITRE------ST  205 (383)
Q Consensus       145 G~gl~i~-----~a~NVIIRnL~ir~g~----~---~d~Da-I~i~~~s~nVwIDHcs~s~~~Dglidi~~~------s~  205 (383)
                      +.+|.|.     .++||+|.|..|..+.    .   .-.|+ |.+..++.+|=|-+|-|.+....+|--..+      ..
T Consensus       113 ~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~  192 (330)
T 2qy1_A          113 ADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAA  192 (330)
T ss_dssp             CCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGC
T ss_pred             CcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCc
Confidence            4568887     5999999999997432    1   11244 466556899999999998654444322111      15


Q ss_pred             eEEEeCceecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEccccceeeec---CCc
Q 016742          206 DITVSRCHFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNWGIYAVCAS---VDS  280 (383)
Q Consensus       206 ~VTIS~n~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~~~~a~~~~---~~a  280 (383)
                      +||+-+|+|.+... .-++..         -.+-+.+|+|.+.....-..+. +++-+.||||.+... .+...   ...
T Consensus       193 ~vT~h~N~f~~~~~R~Pr~r~---------G~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~-p~~~~~~~~~g  262 (330)
T 2qy1_A          193 RTTYHHNRFENVESRVPLQRF---------GLSHIYNNYFNNVTTSGINVRMGGIAKIESNYFENIKN-PVTSRDSSEIG  262 (330)
T ss_dssp             EEEEESCEEEEEEECTTEEES---------SEEEEESCEEEEECSCSEEEETTCEEEEESCEEEEEES-SEEECSSSSBC
T ss_pred             eEEEECcEEcCCCCCCCceec---------ceEEEEeeEEEcccceEeccCCCcEEEEEccEEECCCC-ceeeccCCCce
Confidence            89999999964321 112221         1466788999887655444443 578999999987532 22211   123


Q ss_pred             eEEEEceEEec
Q 016742          281 QIYSQCNIYEA  291 (383)
Q Consensus       281 ~i~~e~Nyf~~  291 (383)
                      ....++| |..
T Consensus       263 ~~~~~~n-~~~  272 (330)
T 2qy1_A          263 YWDLINN-YVG  272 (330)
T ss_dssp             EEEEESC-EEC
T ss_pred             eEEEeCC-ccc
Confidence            4566788 554

>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3

Probab=96.58  E-value=0.011  Score=57.83  Aligned_cols=73  Identities=19%  Similarity=0.256  Sum_probs=58.7

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeec-------CCceEEEeCceecCC
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR-------ESTDITVSRCHFSSH  217 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~-------~s~~VTIS~n~f~~H  217 (383)
                      ..||.+..++||.|+|.+|+.+    +|+|.|. .++||+|.+|.+..+. | |.+..       ...+|+|++|.|.+.
T Consensus       153 tDGidi~~s~nV~I~n~~i~~g----DDciaik-sg~nI~i~n~~~~~gh-G-isiGS~g~~~~~~v~nV~v~n~~~~~t  225 (336)
T 1nhc_A          153 TDGFDISESTGVYISGATVKNQ----DDCIAIN-SGESISFTGGTCSGGH-G-LSIGSVGGRDDNTVKNVTISDSTVSNS  225 (336)
T ss_dssp             CCSEEECSCEEEEEESCEEESS----SEEEEES-SEEEEEEESCEEESSS-E-EEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred             CCcEEecCCCeEEEEeCEEEcC----CCEEEEe-CCeEEEEEeEEEECCc-C-ceEccCccccCCCEEEEEEEeeEEECC
Confidence            3468898899999999999864    5999997 5799999999998765 5 66622       257999999999887


Q ss_pred             CceeEec
Q 016742          218 DKTMLIG  224 (383)
Q Consensus       218 ~k~~LiG  224 (383)
                      ..++.|-
T Consensus       226 ~~girIk  232 (336)
T 1nhc_A          226 ANGVRIK  232 (336)
T ss_dssp             SEEEEEE
T ss_pred             CcEEEEE
Confidence            7666554

>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}

Probab=96.36  E-value=0.042  Score=55.54  Aligned_cols=145  Identities=19%  Similarity=0.186  Sum_probs=87.3

Q ss_pred             CCceEecCCCceEEEEceeeecC--------------------CCCceEeecCCceEEEeCceecCC---Cc--eeEecC
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRDY--------------------DDGLIDITRESTDITVSRCHFSSH---DK--TMLIGA  225 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~~--------------------~Dglidi~~~s~~VTIS~n~f~~H---~k--~~LiG~  225 (383)
                      +-+|.|. +++||+|.+..|...                    .|+ |.+ .++++|=|-+|.|+..   ++  ..++|.
T Consensus       147 g~gl~i~-~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~Da-I~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr  223 (416)
T 1vbl_A          147 GGGFLIK-NVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDS-ISI-EGSSHIWIDHNTFTDGDHPDRSLGTYFGR  223 (416)
T ss_dssp             SCEEEEE-SCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCS-EEE-ESCEEEEEESCEEECTTCCGGGSCEETTE
T ss_pred             cCEEEee-cCceEEEeCeEEEcCccccccccccccccccccCCCce-EEe-cCCceEEEEccEEecCCCcccccccccCc
Confidence            3567886 789999999999753                    243 666 4688898888888742   11  123332


Q ss_pred             C----CCC--CCCcceeEEEeceeecCCCCcCCccc--------cC--eeEEEcceEEccccceeeecCCceEEEEceEE
Q 016742          226 D----PSH--VADRCIRVTIHHCFFDGTRQRHPRVR--------YA--KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIY  289 (383)
Q Consensus       226 ~----d~~--~~d~~~~VT~hhN~f~~~~~R~Pr~r--------~G--~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf  289 (383)
                      .    |..  .....-.||+-+|+|.++.. .=++.        .|  ++.+.+|+|.+....+-..+ ..++.+.||||
T Consensus       224 ~~~~~DGl~Di~~~s~~VTISnn~f~~h~k-~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R-~G~~Hv~NN~~  301 (416)
T 1vbl_A          224 PFQQHDGALDIKNSSDFITISYNVFTNHDK-VTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR-FGQVHIYNNYY  301 (416)
T ss_dssp             ECCCCCCSEEEESSCEEEEEESCEEEEEEE-CCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES-SCEEEEESCEE
T ss_pred             ceeecccceeeecCCCcEEEEeeEEcCCCc-eeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc-cceEEEEcceE
Confidence            1    110  01112489999999976431 11111        12  58999999987655443333 24688899999


Q ss_pred             ecCCccc-eeeeeccccCCccccCcceEEecCCEEEcc
Q 016742          290 EAGQKKM-AFKYLTEKASDKEEARSGCIRSEGDLFITG  326 (383)
Q Consensus       290 ~~g~~~~-~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG  326 (383)
                      .+..... .+.|-      ......+.+..++|+|.++
T Consensus       302 ~n~~~~~~~~~ya------~g~~~~~~i~~E~N~F~~~  333 (416)
T 1vbl_A          302 EFSNLADYDFQYA------WGVGVFSQIYAQNNYFSFD  333 (416)
T ss_dssp             EECTTSSSCCCCS------EEEETTCEEEEESCEEEES
T ss_pred             ECCCCCcccceeE------eccCCCcEEEEECCEEECC
Confidence            8643210 00010      0112345778899999986

>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*

Probab=96.11  E-value=0.061  Score=54.07  Aligned_cols=137  Identities=16%  Similarity=0.231  Sum_probs=83.6

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCC-------------CCc-eEecCCCceEEEEceeeecCCCCceEeecCC------
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPD-------------VDA-IQIKPKSKHIWIDRCSLRDYDDGLIDITRES------  204 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d-------------~Da-I~i~~~s~nVwIDHcs~s~~~Dglidi~~~s------  204 (383)
                      +.+|.|.+++||+|.|..|..+...+             .|+ |.+..++++|=|-.|-|.....++|--..++      
T Consensus       183 ~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g  262 (399)
T 2o04_A          183 YDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDG  262 (399)
T ss_dssp             CCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTT
T ss_pred             CCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccC
Confidence            45788989999999999999763211             244 4555468899999999987544443221111      


Q ss_pred             -ceEEEeCceecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcC--C---c--cc-cCeeEEEcceEEccccc--
Q 016742          205 -TDITVSRCHFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRH--P---R--VR-YAKVHLYNNYTRNWGIY--  272 (383)
Q Consensus       205 -~~VTIS~n~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~--P---r--~r-~G~~hv~NN~~~n~~~~--  272 (383)
                       -.||+-+|+|.++.. .-.+..         -.+-+.+|+|.+.....  |   -  .+ .+++-+.||||.+....  
T Consensus       263 ~~~vT~h~N~f~~~~~R~Pr~R~---------G~~Hv~NN~~~n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~~~~~  333 (399)
T 2o04_A          263 KLKITLHHNRYKNIVQAAPRVRF---------GQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAA  333 (399)
T ss_dssp             CCCEEEESCEEEEEEECTTEESS---------CEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEEESCEEECTTCCSG
T ss_pred             ceeEEEECcEecCCcccCCCccc---------ceEEEEcceEECCCCCCccceeeEeccCCCcEEEEEceEEECCCCCcc
Confidence             289999999964321 111211         14667889997664311  0   1  11 24789999999985321  


Q ss_pred             -eeeec-CCceEEEEceEEe
Q 016742          273 -AVCAS-VDSQIYSQCNIYE  290 (383)
Q Consensus       273 -a~~~~-~~a~i~~e~Nyf~  290 (383)
                       .+..- .+..+...+|+|.
T Consensus       334 ~~~~~~s~~~~~~~~gn~~~  353 (399)
T 2o04_A          334 KTISVFSGGTALYDSGTLLN  353 (399)
T ss_dssp             GGEEECTTCCBCEEESCEET
T ss_pred             ceeeeccCCceEEEeCceec
Confidence             11111 2344566788875

>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3

Probab=95.96  E-value=0.022  Score=56.33  Aligned_cols=72  Identities=14%  Similarity=0.240  Sum_probs=57.8

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeec-------CCceEEEeCceecCC
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR-------ESTDITVSRCHFSSH  217 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~-------~s~~VTIS~n~f~~H  217 (383)
                      ..||.+..++||.|+|-.|+.+    +|+|.|. .++||+|.+|.+..+. | |.+..       ...+|+|++|.|.+.
T Consensus       179 tDGidi~~s~nV~I~n~~i~~g----DDcIaik-sg~nI~i~n~~~~~gh-G-isiGS~G~~~~~~v~nV~v~n~~~~~t  251 (362)
T 1czf_A          179 TDAFDVGNSVGVNIIKPWVHNQ----DDCLAVN-SGENIWFTGGTCIGGH-G-LSIGSVGDRSNNVVKNVTIEHSTVSNS  251 (362)
T ss_dssp             CCSEEECSCEEEEEESCEEECS----SCSEEES-SEEEEEEESCEEESSC-C-EEEEEECSSSCCEEEEEEEEEEEEEEE
T ss_pred             CCceeecCcceEEEEeeEEecC----CCEEEEe-CCeEEEEEEEEEeCCc-e-eEEeeccccCCCCEEEEEEEeeEEECC
Confidence            4578998899999999999964    5999997 5699999999999865 5 66622       246899999999876


Q ss_pred             CceeEe
Q 016742          218 DKTMLI  223 (383)
Q Consensus       218 ~k~~Li  223 (383)
                      ..++.|
T Consensus       252 ~~GirI  257 (362)
T 1czf_A          252 ENAVRI  257 (362)
T ss_dssp             EEEEEE
T ss_pred             ceEEEE
Confidence            655544

>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}

Probab=95.84  E-value=0.055  Score=54.77  Aligned_cols=112  Identities=13%  Similarity=0.203  Sum_probs=75.7

Q ss_pred             hHHHhhhcC-----CCeEEEEEeceEEEecceeEec---cCcceeeeccc---eEEe-------------------C---
Q 016742           99 SLREGCRMK-----EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQR---VKLT-------------------G---  145 (383)
Q Consensus        99 SLr~ai~~~-----~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~g---i~I~-------------------G---  145 (383)
                      |+++||++.     ..|.+|+-..|+.+  +.|.|.   +++||.|.|..   ++|.                   |   
T Consensus        91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~~~~~~d~~~~~n~~G~~~  168 (422)
T 3grh_A           91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYM  168 (422)
T ss_dssp             SHHHHHHHHHTTCCSSCEEEEECSEEEE--SCEEECCCSSCEEEEECSSSGGGEEEEECCCTTSCHHHHHHHHCGGGSSC
T ss_pred             CHHHHHHhchhcCCCccEEEEEeCCeEe--eeEEecCCCCcEEEEeccCCCceEEEeecccccccccccccccccccccc
Confidence            789998752     23566666789985  567784   79999998753   4442                   0   


Q ss_pred             -----------------C--------cEEEeeeccEEEeeeEEecCCC-------CCCCceEecCCCceEEEEceeeecC
Q 016742          146 -----------------K--------GLRLKECEHVIICNLEFEGGKG-------PDVDAIQIKPKSKHIWIDRCSLRDY  193 (383)
Q Consensus       146 -----------------~--------gl~i~~a~NVIIRnL~ir~g~~-------~d~DaI~i~~~s~nVwIDHcs~s~~  193 (383)
                                       .        .|.+ .+++++++||+|+...+       ...-|+.+  .+.++.+.+|.|.-.
T Consensus       169 ~G~~aw~tf~~~~~~~sat~gT~~SAT~~V-~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v--~gDr~~fy~C~f~G~  245 (422)
T 3grh_A          169 PGKPAWYMYDSCQSKRSDSIGVLCSAVFWS-QNNGLQLQNLTIENTLGDSVDAGNHPAVALRT--DGDQVQINNVNILGR  245 (422)
T ss_dssp             TTSTTHHHHHHHHTCCSSSCCGGGCCSEEE-CCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE--CCSSEEEEEEEEECS
T ss_pred             cCccccccccccccccccceeccceEEEEE-ECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe--cCCcEEEEeeEEEee
Confidence                             0        1334 37999999999996532       12345666  468899999999998


Q ss_pred             CCCceEee---------cCCceEEEeCceec
Q 016742          194 DDGLIDIT---------RESTDITVSRCHFS  215 (383)
Q Consensus       194 ~Dglidi~---------~~s~~VTIS~n~f~  215 (383)
                      .|=|+--.         .....--+.+|.|.
T Consensus       246 QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIe  276 (422)
T 3grh_A          246 QNTFFVTNSGVQNRLETNRQPRTLVTNSYIE  276 (422)
T ss_dssp             TTCEEECCCCTTCSCCSSCCCEEEEESCEEE
T ss_pred             cceeeeccccccccccccccccEEEEecEEe
Confidence            88876321         12345667777775

>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*

Probab=95.71  E-value=0.044  Score=57.70  Aligned_cols=101  Identities=11%  Similarity=0.099  Sum_probs=53.0

Q ss_pred             eeeccEEEeeeE----EecCCCCCCCceEecCCCceEEEEceeeecCCCCceEe-ecCCc-eEEEeCceecCCCceeEec
Q 016742          151 KECEHVIICNLE----FEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDI-TREST-DITVSRCHFSSHDKTMLIG  224 (383)
Q Consensus       151 ~~a~NVIIRnL~----ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi-~~~s~-~VTIS~n~f~~H~k~~LiG  224 (383)
                      ..++||+|+||+    |..  ....|||        |+|.+|.|..+.| +|.+ +.++. +++++.| ...| -++-||
T Consensus       207 ~~c~NVtI~nvtfi~aI~s--spNTDGI--------V~I~nc~I~tGDD-CIAI~KSGs~~ni~~e~~-~~GH-gGISIG  273 (600)
T 2x6w_A          207 GYGSNCYVRKCRFINLVNS--SVNADHS--------TVYVNCPYSGVES-CYFSMSSSFARNIACSVQ-LHQH-DTFYRG  273 (600)
T ss_dssp             TBEEEEEEESCEEECCCCC--SSCCCEE--------EEEECSSSEEEES-CEEECCCTTHHHHEEEEE-ECSS-SEEEES
T ss_pred             CCcccEEEeCeEEcceEec--CCCCCEE--------EEEEeeEEecCCc-EEEEecCCCcCCeEEEEE-cCCC-CcEEec
Confidence            456777777777    554  2345666        7777777776544 4777 65543 2455511 1122 255566


Q ss_pred             CCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEccc
Q 016742          225 ADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWG  270 (383)
Q Consensus       225 ~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~  270 (383)
                      +..   ...-.+|++.+ .+..+..|...++  .+++.|....+..
T Consensus       274 Se~---~ggV~NV~V~N-rIKt~~G~GG~V~--NItfeNI~m~nV~  313 (600)
T 2x6w_A          274 STV---NGYCRGAYVVM-HAAEAAGAGSYAY--NMQVENNIAVIYG  313 (600)
T ss_dssp             CEE---EEESEEEEEEE-CGGGCTTTCSEEE--EEEEESCEEEESS
T ss_pred             ccc---cCcEEEEEEEE-EEEeecCCCceEE--EEEEEEEEEEccc
Confidence            531   11123677766 5555554443333  3455555555443

>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*

Probab=95.60  E-value=0.098  Score=52.69  Aligned_cols=12  Identities=17%  Similarity=-0.089  Sum_probs=7.8

Q ss_pred             CCCCCeEEecCC
Q 016742           81 GLHGPLYHVTTL   92 (383)
Q Consensus        81 G~gG~v~~VTnl   92 (383)
                      +.+|.+++|..-
T Consensus       107 ~g~Gs~I~V~a~  118 (410)
T 2inu_A          107 QPGASHIRVLTS  118 (410)
T ss_dssp             SCCSEEEEECCC
T ss_pred             CCCCcEEEEecc
Confidence            456777777763

>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A

Probab=95.36  E-value=0.088  Score=53.90  Aligned_cols=91  Identities=11%  Similarity=0.010  Sum_probs=64.4

Q ss_pred             CcEEEeeeccEEEeeeEEecCCCCCCCc-eEecCCCceEEEEceeeecCCCCceEeecC-----------CceEEEeCce
Q 016742          146 KGLRLKECEHVIICNLEFEGGKGPDVDA-IQIKPKSKHIWIDRCSLRDYDDGLIDITRE-----------STDITVSRCH  213 (383)
Q Consensus       146 ~gl~i~~a~NVIIRnL~ir~g~~~d~Da-I~i~~~s~nVwIDHcs~s~~~Dglidi~~~-----------s~~VTIS~n~  213 (383)
                      .|+.+ .++||.|+|++|..+.  +.+| +... .++||.|+.|.|.. .+| |.++.+           ..+|++++|.
T Consensus       168 DGi~i-~s~nV~I~n~~I~~gd--dgiGs~~~~-~~~NV~V~n~~~~g-g~G-IrIktg~d~IG~~~~g~v~NI~~~Ni~  241 (464)
T 1h80_A          168 NGRLH-WSRNGIIERIKQNNAL--FGYGLIQTY-GADNILFRNLHSEG-GIA-LRMETDNLLMKNYKQGGIRNIFADNIR  241 (464)
T ss_dssp             TTEEE-EEEEEEEEEEEEESCC--TTCEEEEES-EEEEEEEEEEEEES-SEE-EEEECCCHHHHHHTCCEEEEEEEEEEE
T ss_pred             CCcee-eccCEEEeceEEecCC--CeEEecccC-CEeEEEEEeeEEEC-CCE-EEEEeCCceeccCCCCcEEEEEEEeEE
Confidence            34556 5899999999999873  3456 4454 78999999999887 333 344322           5799999999


Q ss_pred             ecCCCceeEecCCCCCCCCcceeEEEeceeecC
Q 016742          214 FSSHDKTMLIGADPSHVADRCIRVTIHHCFFDG  246 (383)
Q Consensus       214 f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~  246 (383)
                      |.+-..++.|+.....    ..+|+|-+-...+
T Consensus       242 ~~nv~~~I~I~p~~~~----isnItfeNI~~t~  270 (464)
T 1h80_A          242 CSKGLAAVMFGPHFMK----NGDVQVTNVSSVS  270 (464)
T ss_dssp             EESSSEEEEEECTTCB----CCCEEEEEEEEES
T ss_pred             EECCceeEEEeCCCce----EeEEEEEEEEEEc
Confidence            9988888888843211    1367777666655

>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*

Probab=94.15  E-value=0.25  Score=50.45  Aligned_cols=163  Identities=13%  Similarity=0.141  Sum_probs=88.6

Q ss_pred             hHHHhhhc----CCCeEEEEEece----EEEecceeEeccCcceeeeccceEEe----CCc-EEEee----eccEEEeee
Q 016742           99 SLREGCRM----KEPLWIVFEVSG----TIHLRSHLSVSSYKTIDGRGQRVKLT----GKG-LRLKE----CEHVIICNL  161 (383)
Q Consensus        99 SLr~ai~~----~~Pr~IVf~vsG----~I~l~~~l~V~snkTI~G~G~gi~I~----G~g-l~i~~----a~NVIIRnL  161 (383)
                      .|++|+++    .++.+|+| ..|    +..+...|.+.++++|.|.+....+.    ..| +....    -...-++||
T Consensus        70 AIQkAIdaA~a~~GGGtVyV-PaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~~I~GtIia~~y~s~I~~~~VeNI  148 (514)
T 2vbk_A           70 AIQNAIDAVASLPSGGELFI-PASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKSGLTGSVLRLSYDSDTIGRYLRNI  148 (514)
T ss_dssp             HHHHHHHHHHTSTTCEEEEC-CCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECTTCCSEEEEECCCSCCSCEEEESC
T ss_pred             HHHHHHHHHhhcCCCeEEEE-CCCCcceeEEECCeEEecCCeEEEEecCceEeeccccccccEEeccCCccccccCceEE
Confidence            37777753    25666655 568    77777888889999999985432211    111 11100    012336788


Q ss_pred             EEecCCCCCCCceEecC-------------CCceEEEEceeee------c-----------CCCCceEeecCCceEEEeC
Q 016742          162 EFEGGKGPDVDAIQIKP-------------KSKHIWIDRCSLR------D-----------YDDGLIDITRESTDITVSR  211 (383)
Q Consensus       162 ~ir~g~~~d~DaI~i~~-------------~s~nVwIDHcs~s------~-----------~~Dglidi~~~s~~VTIS~  211 (383)
                      +|.+...  .||+...-             ..++|-|..|+..      |           +.+ .|++...+.+|.|++
T Consensus       149 aITG~GT--IDG~g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~-gL~f~eSCrNV~Isn  225 (514)
T 2vbk_A          149 RVTGNNT--CNGIDTNITAEDSVIRQVYGWVFDNVMVNEVETAYLMQGLWHSKFIACQAGTCRV-GLHFLGQCVSVSVSS  225 (514)
T ss_dssp             EEECCSS--SEEEEESCCTTCSSCCCEESEEEESCEEEEEEEEEEEESEEEEEEESCEEEEEEE-EEEEESCCEEEEEES
T ss_pred             EEECCCe--EeCCCCCccccceeeeccceEEeeeEEEEeEEEeEeccCcEEEeEeccCceeccc-CccccCCCCeEEEec
Confidence            8886431  22221110             1234555555331      2           122 366665688999999


Q ss_pred             ceecCCC-------------------------ceeEecCCCCCCCCccee-EEEeceeecCCCCcCCccccCeeEEEcce
Q 016742          212 CHFSSHD-------------------------KTMLIGADPSHVADRCIR-VTIHHCFFDGTRQRHPRVRYAKVHLYNNY  265 (383)
Q Consensus       212 n~f~~H~-------------------------k~~LiG~~d~~~~d~~~~-VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~  265 (383)
                      |+|+-.+                         -+..||+....  -+-.+ |++|.|+|.++.+-.-.+-.....+.-|+
T Consensus       226 C~FsVGDdciaiksGk~~~~~~~~~~se~~~hgav~igSE~m~--~Gvk~~v~v~~Clf~~td~~~~~~~~~~~~~~~~~  303 (514)
T 2vbk_A          226 CHFSRGNYSADESFGIRIQPQTYAWSSEAVRSEAIILDSETMC--IGFKNAVYVHDCLDLHMEQLDLDYCGSTGVVIENV  303 (514)
T ss_dssp             CEEECTTSCCTTCEEEEEECBCCTTTSSCBCCEEEEEESSEEE--ESCSEEEEESCCEEEEEESEEEEEESSEEEEESCC
T ss_pred             cEEecCcceeeeecCceecccccCCcchhcccccEEECchhhc--ccccccEEEEeeeccCCccccccccCCcceEEEec
Confidence            9997221                         13345543111  11236 99999999999886544332334455555


Q ss_pred             EE
Q 016742          266 TR  267 (383)
Q Consensus       266 ~~  267 (383)
                      --
T Consensus       304 ~~  305 (514)
T 2vbk_A          304 NG  305 (514)
T ss_dssp             EE
T ss_pred             cC
Confidence            43

>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*

Probab=93.67  E-value=0.38  Score=51.87  Aligned_cols=122  Identities=15%  Similarity=0.156  Sum_probs=63.8

Q ss_pred             hHHHhhhcC------------CCeEEEEEeceEEEecceeEeccCcceeeeccc-eEEe------CCcEEEee-------
Q 016742           99 SLREGCRMK------------EPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQR-VKLT------GKGLRLKE-------  152 (383)
Q Consensus        99 SLr~ai~~~------------~Pr~IVf~vsG~I~l~~~l~V~snkTI~G~G~g-i~I~------G~gl~i~~-------  152 (383)
                      .|++|+++.            .|.+|+| ..|+..+++.|.+.+++.|.|.+.. -+|+      |..| |..       
T Consensus        68 Aiq~Ai~~a~~~Gggc~~st~~~~~V~~-P~GtYlvs~tI~l~~~t~L~G~~~~~pvIka~~~F~G~~l-i~~d~y~~~G  145 (758)
T 3eqn_A           68 AIQAAINAGGRCGQGCDSTTTQPALVYF-PPGTYKVSSPLVVLYQTQLIGDAKNLPTLLAAPNFSGIAL-IDADPYLAGG  145 (758)
T ss_dssp             HHHHHHHTTSCSCTTCCCCSSSCEEEEE-CSSEEEESSCEECCTTEEEEECSSSCCEEEECTTCCSSCS-EESSCBCGGG
T ss_pred             HHHHHHHHhhhcccccccccccceEEEE-CCceEEEcccEEccCCeEEEecCCCCCeEecCCCCCCcce-eeccccCCCC
Confidence            478887652            2345554 6789888888888899999998542 2342      2221 110       


Q ss_pred             --------eccEEEeeeEEecCCC-CCCCceEecCCCceEEEEceeeecC------CCCceEeecCCceEEEeCceecCC
Q 016742          153 --------CEHVIICNLEFEGGKG-PDVDAIQIKPKSKHIWIDRCSLRDY------DDGLIDITRESTDITVSRCHFSSH  217 (383)
Q Consensus       153 --------a~NVIIRnL~ir~g~~-~d~DaI~i~~~s~nVwIDHcs~s~~------~Dglidi~~~s~~VTIS~n~f~~H  217 (383)
                              .--+-||||.|..... ...-+|... .+.+..|.+|.|.-.      .+| |.+. ....+.|+++.|..-
T Consensus       146 ~~w~~~~~~F~r~irNlviD~t~~~~~~~gIhw~-vaQatsL~Nv~i~m~~~sg~~~~G-I~~e-~GSgg~i~Dl~f~GG  222 (758)
T 3eqn_A          146 AQYYVNQNNFFRSVRNFVIDLRQVSGSATGIHWQ-VSQATSLINIVFQMSTAAGNQHQG-IFME-NGSGGFLGDLVFNGG  222 (758)
T ss_dssp             CBSSCGGGCCCEEEEEEEEECTTCSSCEEEEECC-CCSSEEEEEEEEECCCSTTCCEEE-EEEC-SCCCCEEEEEEEESC
T ss_pred             ccccccccceeeeecceEEeccccCCCceEEEEE-ecCceEEEEEEEEecCCCCCccee-EEec-CCCceEEEeeEEeCC
Confidence                    0124566666653321 112233333 455666666666532      223 3332 123455555555555


Q ss_pred             CceeEecC
Q 016742          218 DKTMLIGA  225 (383)
Q Consensus       218 ~k~~LiG~  225 (383)
                      ..++.+|.
T Consensus       223 ~~G~~~gn  230 (758)
T 3eqn_A          223 NIGATFGN  230 (758)
T ss_dssp             SEEEEEEC
T ss_pred             ceEEEcCC
Confidence            55555544

>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*

Probab=84.94  E-value=2.9  Score=44.04  Aligned_cols=61  Identities=16%  Similarity=0.403  Sum_probs=45.3

Q ss_pred             EEeeeccEEEeeeEEecC-CCCCCCceEe---cCCCceEEEEcee----eec--CCCCceEeecCCceEEEeCceecCCC
Q 016742          149 RLKECEHVIICNLEFEGG-KGPDVDAIQI---KPKSKHIWIDRCS----LRD--YDDGLIDITRESTDITVSRCHFSSHD  218 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g-~~~d~DaI~i---~~~s~nVwIDHcs----~s~--~~Dglidi~~~s~~VTIS~n~f~~H~  218 (383)
                      ++.+++   |++|+|+.. ..   -.|.+   . .++||.|++|+    +..  ..||.         |+|++|.|..-+
T Consensus       181 ~f~~c~---I~GITi~NSDP~---w~I~iG~~~-~c~NVtI~nvtfi~aI~sspNTDGI---------V~I~nc~I~tGD  244 (600)
T 2x6w_A          181 RSYNCS---VTGITFQNGDVT---WAITLGWNG-YGSNCYVRKCRFINLVNSSVNADHS---------TVYVNCPYSGVE  244 (600)
T ss_dssp             SEEEEE---EESCEEESCCCS---CSEEECBTT-BEEEEEEESCEEECCCCCSSCCCEE---------EEEECSSSEEEE
T ss_pred             EEeeeE---EeCeEEECCCCc---cEEEeCCCC-CcccEEEeCeEEcceEecCCCCCEE---------EEEEeeEEecCC
Confidence            344454   999999976 32   35667   6 68999999999    543  46774         999999998877


Q ss_pred             ceeEe-cC
Q 016742          219 KTMLI-GA  225 (383)
Q Consensus       219 k~~Li-G~  225 (383)
                      -++-| .+
T Consensus       245 DCIAI~KS  252 (600)
T 2x6w_A          245 SCYFSMSS  252 (600)
T ss_dssp             SCEEECCC
T ss_pred             cEEEEecC
Confidence            77777 44

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	383
d1pxza_	346	b.80.1.1 (A:) Major pollen allergen Jun a 1 {Ozark	2e-89
d1qcxa_	359	b.80.1.2 (A:) Pectin lyase {Aspergillus niger, typ	5e-61
d1pe9a_	361	b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi,	5e-57
d1idka_	359	b.80.1.2 (A:) Pectin lyase {Aspergillus niger, typ	2e-56
d1bn8a_	399	b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [Ta	2e-50
d1o88a_	353	b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi,	4e-45

>d1pxza_ b.80.1.1 (A:) Major pollen allergen Jun a 1 {Ozark white cedar (Juniperus ashei) [TaxId: 13101]} Length = 346

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Major pollen allergen Jun a 1
species: Ozark white cedar (Juniperus ashei) [TaxId: 13101]

 Score =  271 bits (694), Expect = 2e-89
 Identities = 99/327 (30%), Positives = 148/327 (45%), Gaps = 30/327 (9%)

Query: 65  RALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTI 120
             LA  A GFG   +GG  G  Y VT+  D+     PG+LR G   ++ LWI+F  +  I
Sbjct: 19  MKLADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQNMNI 78

Query: 121 HLRSHLSVSSYKTIDGRGQRVKLTGKG--LRLKECEHVIICNLEFEGGKGPDVDAIQIKP 178
            L+  L V+ +KTIDGRG  V L   G  L +++  HVI+ +L   G     +  + +  
Sbjct: 79  KLKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSE 138

Query: 179 K------------------SKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKT 220
                                + WID  SL D  DGLID+T  ST IT+S  HF +H K 
Sbjct: 139 SIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKV 198

Query: 221 MLIGADPSHVADRCIRVTIHHC-FFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVD 279
           ML+G D ++  D+ ++VT+    F     QR PR RY  VH+ NN    W IYA+  S +
Sbjct: 199 MLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSN 258

Query: 280 SQIYSQCNIYEAGQKKMAFKYLT-EKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEH 338
             I S+ N + A  +    +              +   RS  D FI G       +  E 
Sbjct: 259 PTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGKTEET 318

Query: 339 SMFHPSEYYPTWTVAAPTDNLKQVLQH 365
           ++++ +E +         +   Q+ ++
Sbjct: 319 NIYNSNEAFK----VENGNAAPQLTKN 341

>d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]} Length = 359

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin lyase
domain: Pectin lyase
species: Aspergillus niger, type B [TaxId: 5061]

 Score =  198 bits (505), Expect = 5e-61
 Identities = 58/359 (16%), Positives = 107/359 (29%), Gaps = 65/359 (18%)

Query: 66  ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFE---------- 115
            + G AEGF     GG      + TT  +     L       EP  I+ +          
Sbjct: 2   GVVGAAEGFAHGVTGGGSASPVYPTTTDE-----LVSYLGDNEPRVIILDQTFDFTGTEG 56

Query: 116 -------------------------------------VSGTIHLRSHLSVSSYKTIDGRG 138
                                                V+        ++V+S K+I G+G
Sbjct: 57  TETTTGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQG 116

Query: 139 QRVKLTGKGLRL-KECEHVIICNLEFEGGKGPDV---DAIQIKPKSKHIWIDRCSL-RDY 193
            +  + GKGLR+    ++VII N+         V   DAI +   S  +WID  +  R  
Sbjct: 117 TKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDD-SDLVWIDHVTTARIG 175

Query: 194 DDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH----VADRCIRVTIHHCFFDGTRQ 249
              ++  T     +T+S                  +    +      VT+   +F     
Sbjct: 176 RQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSG 235

Query: 250 RHPRVRY-AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDK 308
           R P+V+    +H  NN   N+  +A        + ++ N+++     +      +  S  
Sbjct: 236 RMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVETPISGQLFSSP 295

Query: 309 EEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYP--TWTVAAPTDNLKQVLQH 365
           +   +    S           G             S++          P    +  +++
Sbjct: 296 DANTNQQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGAIAQWTMKN 354

>d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]} Length = 361

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type A [TaxId: 556]

 Score =  188 bits (478), Expect = 5e-57
 Identities = 73/363 (20%), Positives = 125/363 (34%), Gaps = 76/363 (20%)

Query: 67  LAGQAEGFGRLAIG------GLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTI 120
            +    G+                 +Y VT +++                 I+  + GTI
Sbjct: 10  ESAPTVGWASQNGFTTGGAAATSDNIYIVTNISE-----FTSALSAGAEAKIIQ-IKGTI 63

Query: 121 HL--------------RSHLSVSSYKTIDGRGQRVKLTGKGLRL---KECEHVIICNLEF 163
            +              RS +++ +  T+ G G   K     L +       +VII N+  
Sbjct: 64  DISGGTPYTDFADQKARSQINIPANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYI 123

Query: 164 EG------------GKGPDVDAIQIKPKSKHIWIDRCSLRDYD----------------- 194
           +             G   + DA+ I   + H+WID  ++ D +                 
Sbjct: 124 QTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183

Query: 195 DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVA--DRCIRVTIHHCFFDGTRQRHP 252
           DG +DI R S  +T+S      HDKTMLIG   S+ +     + VT+ +  F+   +R P
Sbjct: 184 DGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAP 243

Query: 253 RVRYAKVHLYNNYTRNWG-------IYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKA 305
           RVRY  +H +NN  +           Y+        + S+ N +              KA
Sbjct: 244 RVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIA------NLSASKA 297

Query: 306 SDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQH 365
               +  +G I S+    + G+       +G     + S+    + V   T  L Q +  
Sbjct: 298 CKVVKKFNGSIFSDNGSVLNGSAV---DLSGCGFSAYTSKIPYIYDVQPMTTELAQSITD 354

Query: 366 CTG 368
             G
Sbjct: 355 NAG 357

>d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]} Length = 359

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin lyase
domain: Pectin lyase
species: Aspergillus niger, type A [TaxId: 5061]

 Score =  186 bits (474), Expect = 2e-56
 Identities = 53/357 (14%), Positives = 104/357 (29%), Gaps = 64/357 (17%)

Query: 67  LAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFE----------- 115
           ++G AEGF +   GG      +  T+ +     L       E   IV             
Sbjct: 3   VSGSAEGFAKGVTGGGSATPVYPDTIDE-----LVSYLGDDEARVIVLTKTFDFTDSEGT 57

Query: 116 ------------------------------------VSGTIHLRSHLSVSSYKTIDGRGQ 139
                                               V         ++V+S K++ G G 
Sbjct: 58  TTGTGCAPWGTASACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGS 117

Query: 140 RVKLTGKGLRL-KECEHVIICNLEFEGGK---GPDVDAIQIKPKSKHIWIDRCSLRD-YD 194
              + GKGLR+    E++II N+             DAI +      +WID  +      
Sbjct: 118 SGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVWIDHVTTARIGR 176

Query: 195 DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSH----VADRCIRVTIHHCFFDGTRQR 250
              +  T     ++++  +               +    +      VT+   +   T  R
Sbjct: 177 QHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGR 236

Query: 251 HPRVRY-AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKE 309
            P+V+    +H  NNY  +   +A        + ++ N+++     +             
Sbjct: 237 SPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVLETYEGEAFTVPSS 296

Query: 310 EARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLK-QVLQH 365
            A   C    G   +        T + + + F           A+   ++  +V+ +
Sbjct: 297 TAGEVCSTYLGRDCVINGFGSSGTFSEDSTSFLSDFEGKNIASASAYTSVASRVVAN 353

>d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]} Length = 399

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Bacillus subtilis [TaxId: 1423]

 Score =  172 bits (436), Expect = 2e-50
 Identities = 67/275 (24%), Positives = 104/275 (37%), Gaps = 53/275 (19%)

Query: 123 RSHLSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGK--------------- 167
           R  + + +  TI G G   K+ G   ++K  ++VII N+EF+                  
Sbjct: 120 RVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNVIIRNIEFQDAYDYFPQWDPTDGSSGN 178

Query: 168 -GPDVDAIQIKPKSKHIWIDRCSLR-----------------DYDDGLIDITRESTDITV 209
                D I I     HIWID C+                    + DG  D +  +  IT+
Sbjct: 179 WNSQYDNITING-GTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITM 237

Query: 210 SRCHFSSHDKTMLIGADPSHVADRC-IRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRN 268
           S  ++  HDK+ + G+  S  +D   +++T+HH  +    QR PRVR+ +VH+YNNY   
Sbjct: 238 SYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEG 297

Query: 269 WG-------IYAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGD 321
                     YA      S+IY+Q N+ +      A                G    +  
Sbjct: 298 STSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSAAKTISVFS--------GGTALYDSG 349

Query: 322 LFITGTQAGLMTEAGEHS--MFHPSEYYPTWTVAA 354
             + GTQ       G  S   + PS +      A 
Sbjct: 350 TLLNGTQINASAANGLSSSVGWTPSLHGSIDASAN 384

>d1o88a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type C [TaxId: 556]} Length = 353

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type C [TaxId: 556]

 Score =  156 bits (396), Expect = 4e-45
 Identities = 53/319 (16%), Positives = 101/319 (31%), Gaps = 35/319 (10%)

Query: 68  AGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLRSHLS 127
           A + +  G+   GG +  +   T   D    +       +               R    
Sbjct: 35  AARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDP----------RGVEI 84

Query: 128 VSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGKG--PDVDAIQIKPKSKHIWI 185
               K I   G        G+ +K+   V++ N+      G   D D I++   S ++W+
Sbjct: 85  KEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDD-SPNVWV 143

Query: 186 DRCSL-------------RDYDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVAD 232
           D   L                 +  +DI   S  +TVS  +     K  L G   S  +D
Sbjct: 144 DHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDG---SSSSD 200

Query: 233 RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAG 292
               +T HH +++    R P  R   VH YNN   N     +    + Q   + N +E  
Sbjct: 201 TGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKA 260

Query: 293 QKKMAFKY-----LTEKASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYY 347
              +  +Y      T         +     +    +   T+  +  ++   +   P+  Y
Sbjct: 261 INPVTSRYDGKNFGTWVLKGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAY 320

Query: 348 PTWTVAAPTDNLKQVLQHC 366
             ++  +      ++  + 
Sbjct: 321 N-YSPVSAQCVKDKLPGYA 338

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	383
d1pxza_	346	Major pollen allergen Jun a 1 {Ozark white cedar (	100.0
d1pcla_	355	Pectate lyase {Erwinia chrysanthemi, type E [TaxId	100.0
d1pe9a_	361	Pectate lyase {Erwinia chrysanthemi, type A [TaxId	100.0
d1qcxa_	359	Pectin lyase {Aspergillus niger, type B [TaxId: 50	100.0
d1bn8a_	399	Pectate lyase {Bacillus subtilis [TaxId: 1423]}	100.0
d1idka_	359	Pectin lyase {Aspergillus niger, type A [TaxId: 50	100.0
d1o88a_	353	Pectate lyase {Erwinia chrysanthemi, type C [TaxId	100.0
d1bhea_	376	Polygalacturonase {Erwinia carotovora, subsp. caro	98.71
d1ofla_	481	Chondroitinase B {Pedobacter heparinus [TaxId: 984	98.51
d1czfa_	335	Polygalacturonase {Fungus (Aspergillus niger), end	98.43
d1ia5a_	339	Polygalacturonase {Fungus (Aspergillus aculeatus)	98.15
d1ia5a_	339	Polygalacturonase {Fungus (Aspergillus aculeatus)	98.12
d1hg8a_	349	Polygalacturonase {Fusarium moniliforme [TaxId: 11	98.09
d1rmga_	422	Rhamnogalacturonase A {Aspergillus aculeatus [TaxI	98.05
d1hg8a_	349	Polygalacturonase {Fusarium moniliforme [TaxId: 11	97.95
d1rmga_	422	Rhamnogalacturonase A {Aspergillus aculeatus [TaxI	97.86
d1nhca_	336	Polygalacturonase {Fungus (Aspergillus niger), end	97.78
d1nhca_	336	Polygalacturonase {Fungus (Aspergillus niger), end	97.66
d1ru4a_	400	Pectate transeliminase {Erwinia chrysanthemi [TaxI	97.5
d1k5ca_	333	Polygalacturonase {Fungus (Stereum purpureum), end	97.27
d1idka_	359	Pectin lyase {Aspergillus niger, type A [TaxId: 50	97.22
d1ofla_	481	Chondroitinase B {Pedobacter heparinus [TaxId: 984	97.2
d1pxza_	346	Major pollen allergen Jun a 1 {Ozark white cedar (	96.97
d1o88a_	353	Pectate lyase {Erwinia chrysanthemi, type C [TaxId	96.97
d1pcla_	355	Pectate lyase {Erwinia chrysanthemi, type E [TaxId	96.85
d1qcxa_	359	Pectin lyase {Aspergillus niger, type B [TaxId: 50	96.74
d1gq8a_	319	Pectin methylesterase PemA {Carrot (Daucus carota)	96.7
d1qjva_	342	Pectin methylesterase PemA {Erwinia chrysanthemi [	96.67
d1ogmx2	373	Dextranase, catalytic domain {Penicillium miniolut	96.48
d1ogmx2	373	Dextranase, catalytic domain {Penicillium miniolut	96.32
d1bn8a_	399	Pectate lyase {Bacillus subtilis [TaxId: 1423]}	96.32
d1bhea_	376	Polygalacturonase {Erwinia carotovora, subsp. caro	96.09
d1pe9a_	361	Pectate lyase {Erwinia chrysanthemi, type A [TaxId	95.84
d1czfa_	335	Polygalacturonase {Fungus (Aspergillus niger), end	95.83
d1k5ca_	333	Polygalacturonase {Fungus (Stereum purpureum), end	95.72
d1ru4a_	400	Pectate transeliminase {Erwinia chrysanthemi [TaxI	93.06

>d1pxza_ b.80.1.1 (A:) Major pollen allergen Jun a 1 {Ozark white cedar (Juniperus ashei) [TaxId: 13101]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Major pollen allergen Jun a 1
species: Ozark white cedar (Juniperus ashei) [TaxId: 13101]

Probab=100.00  E-value=1.3e-71  Score=551.26  Aligned_cols=304  Identities=35%  Similarity=0.534  Sum_probs=256.4

Q ss_pred             cccccccCCCcccccCCCCCCCCCCeEEecCCCCC----CCchHHHhhhcCCCeEEEEEeceEEEecceeEeccCcceee
Q 016742           61 DCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDG  136 (383)
Q Consensus        61 ~~~~~a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~----g~GSLr~ai~~~~Pr~IVf~vsG~I~l~~~l~V~snkTI~G  136 (383)
                      +.++++|++||||||++||||+||+||+||||+|+    +|||||+||++++||||||+|+|+|+|+++|.|.|||||+|
T Consensus        15 ~~~~~~~~~~a~Gfg~~ttGG~gG~v~~Vt~l~D~~~~~g~GsLr~a~~~~~pr~IvF~vsg~I~l~~~L~v~sn~TI~G   94 (346)
T d1pxza_          15 DQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKTIDG   94 (346)
T ss_dssp             TTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCCCTTSCCTTSHHHHHHCSSCEEEEESSCEEECCSSCEECCSSEEEEC
T ss_pred             HHHHHhhhhccccccCCCcCCCCceEEEecChhhccccCCCccHHHHhhCCCCeEEEEeccEEEeccceEEeCCCceEEc
Confidence            67899999999999999999999999999999998    99999999999999999999999999999999999999999


Q ss_pred             eccceEEeCCc--EEEeeeccEEEeeeEEecCC-------------------CCCCCceEecCCCceEEEEceeeecCCC
Q 016742          137 RGQRVKLTGKG--LRLKECEHVIICNLEFEGGK-------------------GPDVDAIQIKPKSKHIWIDRCSLRDYDD  195 (383)
Q Consensus       137 ~G~gi~I~G~g--l~i~~a~NVIIRnL~ir~g~-------------------~~d~DaI~i~~~s~nVwIDHcs~s~~~D  195 (383)
                      ||..+.|.+.+  |.+.+++|||||||+||.+.                   ..++|+|.|+ ++++||||||+|+|+.|
T Consensus        95 ~ga~~~i~~~G~~i~i~~~~NVIirnl~i~~~~~~~~~~~~~~~~~~~~~~~~~~gDai~i~-~s~nvwIDH~s~s~~~D  173 (346)
T d1pxza_          95 RGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR-NVTNAWIDHNSLSDCSD  173 (346)
T ss_dssp             TTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE-SCEEEEEESCEEECCSS
T ss_pred             cCCCceEeeecceEEEecCCEEEEeceEEecCcccCCcccccccccCccccccCCCceeeee-cCceEEEECcEeecccc
Confidence            99888888654  88888999999999999753                   1357999998 79999999999999999


Q ss_pred             CceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCC-cCCccccCeeEEEcceEEcccccee
Q 016742          196 GLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQ-RHPRVRYAKVHLYNNYTRNWGIYAV  274 (383)
Q Consensus       196 glidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~-R~Pr~r~G~~hv~NN~~~n~~~~a~  274 (383)
                      |+||+++++++||||||+|++|.|++|+|+++....++.++||||||+|.++.. |.|++|+|.+|++||||+||..|++
T Consensus       174 ~~idi~~~s~~vTis~~~f~~~~~~~~~G~~~~~~~~~~~~vT~hhN~~~~n~~r~~p~~r~g~~hv~NN~~~n~~~~~~  253 (346)
T d1pxza_         174 GLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAI  253 (346)
T ss_dssp             EEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSEEEEESCEECCCSSCSE
T ss_pred             CceeEecCCEEEEEEeeEEccCccccccCCCcccccCCCceEEEEccccCCCcccCCCccccceEEEECcEeecCccEEE
Confidence            999999999999999999999999999999887666777899999999976655 5568899999999999999999999


Q ss_pred             eecCCceEEEEceEEecCCccceeeeecc-ccCCccccCcceEEecCCEEEccccccccccCCcccccCCCCCCCccccC
Q 016742          275 CASVDSQIYSQCNIYEAGQKKMAFKYLTE-KASDKEEARSGCIRSEGDLFITGTQAGLMTEAGEHSMFHPSEYYPTWTVA  353 (383)
Q Consensus       275 ~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~-~~~~~~~~~~g~~~~~gn~~~nG~~~~~~~~~~~~~~~~p~~~Y~~yt~~  353 (383)
                      ++++++++++|+|||++++.+........ ..........+.+++.+|.|+++++............|.|++   .|+++
T Consensus       254 ~~~~~~~v~~e~N~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~nga~~~~sg~~~~~~~~~~~~---~y~~~  330 (346)
T d1pxza_         254 GGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGKTEETNIYNSNE---AFKVE  330 (346)
T ss_dssp             EEESCCEEEEESCEEECCSCGGGCBSEEECSCSCHHHHTTSCEEEESCEEETTCBCCCBSCCCCCCCCCTTT---CCCCC
T ss_pred             eccCceEEEEEeeEEECCCCccceeeecccccCCccccccceeeccCceeeccceeccCCCccccccccCcc---ccccC
Confidence            99999999999999999876543221111 111122345668889999999987643222122334566654   36788


Q ss_pred             ChHHHHHHHHHhccCCC
Q 016742          354 APTDNLKQVLQHCTGWQ  370 (383)
Q Consensus       354 ~A~~a~~~vl~~~AG~q  370 (383)
                      +|+ +|++|+ +.||+.
T Consensus       331 ~as-~V~~v~-~~AGal  345 (346)
T d1pxza_         331 NGN-AAPQLT-KNAGVV  345 (346)
T ss_dssp             CGG-GHHHHT-TTCSSC
T ss_pred             CHH-HHHhhh-ccCCCC
Confidence            886 678866 479985

>d1pcla_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type E [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type E [TaxId: 556]

Probab=100.00  E-value=2e-63  Score=493.56  Aligned_cols=292  Identities=25%  Similarity=0.394  Sum_probs=234.1

Q ss_pred             CcccccC----CCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec--------------ceeEeccC
Q 016742           70 QAEGFGR----LAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR--------------SHLSVSSY  131 (383)
Q Consensus        70 ~aeGfg~----~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~--------------~~l~V~sn  131 (383)
                      ++.|||+    .|+||+||+||+||||+|     ||+|+++++|+++||+|+|+|+|.              .+|.|.||
T Consensus         7 a~~G~a~~~g~~t~GG~gg~v~~Vt~l~d-----L~~al~~~~~~~~vi~v~G~I~~~~~~~~~~~~~~~~~~~i~v~sn   81 (355)
T d1pcla_           7 ATTGWATQNGGTTGGAKAAKAVEVKNISD-----FKKALNGTDSSAKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSN   81 (355)
T ss_pred             CCCceeccCCCCCcCCCCceEEEeCCHHH-----HHHHHhCcCCceEEEEECeEEEcCCccceeccccccccceEecCCC
Confidence            4667766    588999999999999999     999999999999999999999974              35788999


Q ss_pred             cceeeeccceEEeCCcEEEeeeccEEEeeeEEecCC------------CCCCCceEecCCCceEEEEceeeecCC-----
Q 016742          132 KTIDGRGQRVKLTGKGLRLKECEHVIICNLEFEGGK------------GPDVDAIQIKPKSKHIWIDRCSLRDYD-----  194 (383)
Q Consensus       132 kTI~G~G~gi~I~G~gl~i~~a~NVIIRnL~ir~g~------------~~d~DaI~i~~~s~nVwIDHcs~s~~~-----  194 (383)
                      |||+|+|.+++|.|.+|+|++++|||||||+||++.            ..+.|+|.+. +++|||||||+|+|+.     
T Consensus        82 ~TI~G~G~~~~i~g~gl~i~~a~NVIirnl~ir~~~~~~~~~~~g~~~~~~~D~i~~~-~~~~vwIDHcs~s~~~d~~~~  160 (355)
T d1pcla_          82 TTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVID-NSTNVWVDHVTISDGSFTDDK  160 (355)
T ss_pred             CeEEeccCceEEecCEEEEEccccEEEEeeEeecCcccCCccccCCCcCccCceEEec-CCccEEEECcccccCcccccc
Confidence            999999999999999999999999999999999753            1347999998 8999999999999964     


Q ss_pred             ------------CCceEeecCCceEEEeCceecCCCceeEecCCCCCC--CCcceeEEEeceeecCCCCcCCccccCeeE
Q 016742          195 ------------DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHV--ADRCIRVTIHHCFFDGTRQRHPRVRYAKVH  260 (383)
Q Consensus       195 ------------Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~--~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~h  260 (383)
                                  |+++|++..+++||||||+|.+|.|++|+|+++...  .+...+||||||||+++.+|+||+|+|++|
T Consensus       161 ~~~~~~~~~~~~dg~~d~~~~s~~vTiS~~~~~~~~~~~l~G~~~~~~~~~~~~~~vT~hhNl~~~~~~R~P~~r~G~~h  240 (355)
T d1pcla_         161 YTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVRFGSIH  240 (355)
T ss_pred             cccccccccccccceeeeccceeeEEEeeeecCCcccceeecCCCCCccccCCcceEEEecccccCCcccCCcccccEEE
Confidence                        888999999999999999999999999999886543  334579999999999999999999999999


Q ss_pred             EEcceEEcccc-------ceeeecCCceEEEEceEEecCCccceeeeeccccCCc-cccCcceEEecCCEEEcccccccc
Q 016742          261 LYNNYTRNWGI-------YAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDK-EEARSGCIRSEGDLFITGTQAGLM  332 (383)
Q Consensus       261 v~NN~~~n~~~-------~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~-~~~~~g~~~~~gn~~~nG~~~~~~  332 (383)
                      ++||||+||..       |+++.+.++++++|+|||++++.+.....  ...... ......++.. .+.+++|....+.
T Consensus       241 v~NN~~~n~~~~~~~~~~y~~~~~~~~~v~~e~NyF~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~  317 (355)
T d1pcla_         241 AYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSNLKSIDGK--NPECSIVKQFNSKVFSD-KGSLVNGSTTTKL  317 (355)
T ss_pred             EECcEEECCCCcccccceeeeccCcCceEEEeCCEEECCCCcccccc--CCCccceeccCCcEEec-CcccccCcccccc
Confidence            99999999754       68888999999999999999876533211  000000 0111222322 2334455443322


Q ss_pred             ccCCcccccCCCCCCCccccCChHHHHHHHHHhccCCCCC
Q 016742          333 TEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       333 ~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      + ......|.|..+| .|+++.+++++++.|.+.||++++
T Consensus       318 ~-~~~~~~~~~~~p~-~~~~~~~a~~v~~~V~~~AGAGkl  355 (355)
T d1pcla_         318 D-TCGLTAYKPTLPY-KYSAQTMTSSLATSINNNAGYGKL  355 (355)
T ss_pred             C-CccccccccCCCc-cceecChHHHHHHHHhhcCCCCcC
Confidence            2 2344567887778 488876546788888888999873

>d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type A [TaxId: 556]

Probab=100.00  E-value=1.1e-62  Score=489.55  Aligned_cols=289  Identities=25%  Similarity=0.415  Sum_probs=226.9

Q ss_pred             CCcccccC---CCCCCCCC---CeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec--------------ceeEe
Q 016742           69 GQAEGFGR---LAIGGLHG---PLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR--------------SHLSV  128 (383)
Q Consensus        69 ~~aeGfg~---~ttGG~gG---~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~--------------~~l~V  128 (383)
                      .+++||++   +||||+||   +||+||||+|     ||+|++++.++.|| .|+|+|+|.              .+|.|
T Consensus        12 ~~~~G~a~~~ggttGG~gg~~g~v~~Vt~l~d-----L~~al~~~~~p~iI-~v~G~I~~~~~~~~~~~~~~~~~~~i~v   85 (361)
T d1pe9a_          12 APTVGWASQNGFTTGGAAATSDNIYIVTNISE-----FTSALSAGAEAKII-QIKGTIDISGGTPYTDFADQKARSQINI   85 (361)
T ss_dssp             CCSSSGGGSSSCCCTTTTCCGGGEEEECSHHH-----HHHHHTTTTSCEEE-EECSEEETTTTCCCCSHHHHHHHSEEEC
T ss_pred             cCCcceeecCCCCCcCCCCcCCEEEEeCCHHH-----HHHHHhCCCCeEEE-EEeeEEECCCCccccccccccccceEEe
Confidence            34678876   57777666   6999999999     99999876544444 499999984              46888


Q ss_pred             ccCcceeeeccceEEeCCcEEEe---eeccEEEeeeEEecCCC------------CCCCceEecCCCceEEEEceeeecC
Q 016742          129 SSYKTIDGRGQRVKLTGKGLRLK---ECEHVIICNLEFEGGKG------------PDVDAIQIKPKSKHIWIDRCSLRDY  193 (383)
Q Consensus       129 ~snkTI~G~G~gi~I~G~gl~i~---~a~NVIIRnL~ir~g~~------------~d~DaI~i~~~s~nVwIDHcs~s~~  193 (383)
                      .|||||+|+|++++|.+.+|.|.   +++||||||||||.+..            .+.|+|.|..+++|||||||+|+|+
T Consensus        86 ~sn~TI~G~g~~~~i~~~gl~i~~~~~~~NVIiRnl~ir~~~~~~~~~~~~~~~~~~~Dai~i~~~s~~VwIDH~s~s~~  165 (361)
T d1pe9a_          86 PANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDG  165 (361)
T ss_dssp             CSSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECT
T ss_pred             CCCcEEEEecCCeEEeeeeEEEeeccccceEEEEeEEeecCccCCCccccCCCcccCCCeeEEecCCceEEEEccEeccC
Confidence            99999999999999999999995   58899999999996531            3579999975689999999999996


Q ss_pred             C-----------------CCceEeecCCceEEEeCceecCCCceeEecCCCCCC-C-CcceeEEEeceeecCCCCcCCcc
Q 016742          194 D-----------------DGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHV-A-DRCIRVTIHHCFFDGTRQRHPRV  254 (383)
Q Consensus       194 ~-----------------Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~-~-d~~~~VT~hhN~f~~~~~R~Pr~  254 (383)
                      .                 ||++|++.++++||||||+|.+|.|+||+|+++... . ++.++||||||||+++.+|+||+
T Consensus       166 ~~~~~~~~~~~~~~~~~~Dg~~di~~~s~~vTiS~~~f~~h~~~~l~G~~d~~~~~d~g~~~vT~hhN~~~~~~~R~P~~  245 (361)
T d1pe9a_         166 NFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRV  245 (361)
T ss_dssp             TSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEE
T ss_pred             CccccccccccCcceeeeeeeEEeecCccceEecCCcccCCCcceEeccCCCCccccCCcceEEEECccccCCcCcCCCe
Confidence            4                 899999999999999999999999999999987542 2 34579999999999999999999


Q ss_pred             ccCeeEEEcceEEcccc-------ceeeecCCceEEEEceEEecCCccceeeeeccccCCccccCcceEEecCCEEEccc
Q 016742          255 RYAKVHLYNNYTRNWGI-------YAVCASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGT  327 (383)
Q Consensus       255 r~G~~hv~NN~~~n~~~-------~a~~~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~  327 (383)
                      |+|++|+|||||+||..       |+++++.++++++|+|||++++.+....      ........+.+....+.+++|.
T Consensus       246 r~G~~Hv~NNy~~n~~~~~~~~~~y~~~~~~~a~il~E~NyF~~~~~~~~~~------~~~~~~~~g~~~~~~~~~~~g~  319 (361)
T d1pe9a_         246 RYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLSASKA------CKVVKKFNGSIFSDNGSVLNGS  319 (361)
T ss_dssp             SSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCCGGGG------GGGEEESSCCEEEEESCEETTE
T ss_pred             eCceEEEECceeecCcCccccccceeeecCCCCEEEEEceEEECCCCCcccc------cceeecCCCCEEecCCeeecCc
Confidence            99999999999999754       7899999999999999999876542210      0001112333333444555665


Q ss_pred             cccccccCCcccccCCCCCCCccccCChHHHHHHHHHhccCCCCC
Q 016742          328 QAGLMTEAGEHSMFHPSEYYPTWTVAAPTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       328 ~~~~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~~vl~~~AG~q~~  372 (383)
                      .....  ......+.++++| .|+++++++.+++.|.+.||++++
T Consensus       320 ~~~~~--~~~~~~~~~~~py-~y~~~~~a~~v~~~V~~~AGaGkl  361 (361)
T d1pe9a_         320 AVDLS--GCGFSAYTSKIPY-IYDVQPMTTELAQSITDNAGSGKL  361 (361)
T ss_dssp             ECCCT--TSSCBCCCSCCCS-CCCCCCCCHHHHHHHHHHCSTTCC
T ss_pred             ccccc--CCcccccccCCCc-ccccccchHHHHHHHHhcCCCCCC
Confidence            43221  1222345555667 488888556788889999999873

>d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin lyase
domain: Pectin lyase
species: Aspergillus niger, type B [TaxId: 5061]

Probab=100.00  E-value=3.1e-62  Score=486.02  Aligned_cols=222  Identities=23%  Similarity=0.289  Sum_probs=198.4

Q ss_pred             ccCCCcccccCCCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEEec----------------------
Q 016742           66 ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR----------------------  123 (383)
Q Consensus        66 a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~l~----------------------  123 (383)
                      .+.+.|||||+.||||++|++|+|||++|     ||+||++++||||+|+  |+|++.                      
T Consensus         2 ~v~g~a~Gfa~~ttGG~~g~v~~Vtt~~e-----L~~al~~~~PriI~~~--gtid~~~~~~~~~~~~~~~~~~~~~~~~   74 (359)
T d1qcxa_           2 GVVGAAEGFAHGVTGGGSASPVYPTTTDE-----LVSYLGDNEPRVIILD--QTFDFTGTEGTETTTGCAPWGTASQCQV   74 (359)
T ss_dssp             CCCSCCCGGGTTCCTTTTCCCBCCCSHHH-----HHHHHHSSSCEEEEEC--SEEECTTTTCEEEEEEECTTCSSTTBCE
T ss_pred             CCCccCcccccCCCCCCCCeEEEeCCHHH-----HHHHhcCCCCeEEEEC--ceEccccccccccccccccccccccccc
Confidence            35688999999999999999999999999     9999999999999974  888764                      


Q ss_pred             ---------------------------ceeEeccCcceeeeccceEEeCCcEEE-eeeccEEEeeeEEecCCC---CCCC
Q 016742          124 ---------------------------SHLSVSSYKTIDGRGQRVKLTGKGLRL-KECEHVIICNLEFEGGKG---PDVD  172 (383)
Q Consensus       124 ---------------------------~~l~V~snkTI~G~G~gi~I~G~gl~i-~~a~NVIIRnL~ir~g~~---~d~D  172 (383)
                                                 .+|.|.|||||+|+|.++.|.|.+|++ ++++|||||||+||++..   .+.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~~~~~~~NVIirnl~ir~~~~~~~~~~D  154 (359)
T d1qcxa_          75 AINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGD  154 (359)
T ss_dssp             EECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCC
T ss_pred             ccccccccccccccCcceeeeeeccCcceEEeCCCCeEEeccCCeEEEccceEEEeCCccEEEeCeEEecCCCCCCCCCC
Confidence                                       258899999999999999999999977 579999999999997653   4579


Q ss_pred             ceEecCCCceEEEEceeeecCCCC-ceEeecCCceEEEeCceecCCCceeEecCCCCC----CCCcceeEEEeceeecCC
Q 016742          173 AIQIKPKSKHIWIDRCSLRDYDDG-LIDITRESTDITVSRCHFSSHDKTMLIGADPSH----VADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       173 aI~i~~~s~nVwIDHcs~s~~~Dg-lidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~----~~d~~~~VT~hhN~f~~~  247 (383)
                      +|.|. +++|||||||+|+|..|+ ++++++.+++||||||+|.+|.|.++++..+..    ..++.++||||||||+++
T Consensus       155 ai~i~-~s~nvwIDH~s~s~~~d~~~~~~~~~s~~vTvs~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~vT~hhN~~~~~  233 (359)
T d1qcxa_         155 AITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNL  233 (359)
T ss_dssp             SEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESB
T ss_pred             eEEee-CCCCEEEEeeeccccCCCceEeeccCCCceEeeccEeccCccccccccccCCCCceecCCCceEEEEeeeccCC
Confidence            99998 799999999999998875 568888889999999999999999998865432    234568999999999999


Q ss_pred             CCcCCccccCe-eEEEcceEEccccceeeecCCceEEEEceEEecCCcc
Q 016742          248 RQRHPRVRYAK-VHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQKK  295 (383)
Q Consensus       248 ~~R~Pr~r~G~-~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~~  295 (383)
                      .+|+||+|+|. +|++||||+||..|+++.++++++++|+|||++++.+
T Consensus       234 ~~R~P~~r~g~~~hv~NN~~~n~~~~~~~~~~~~~v~~e~N~F~~~~~~  282 (359)
T d1qcxa_         234 SGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVV  282 (359)
T ss_dssp             CSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEE
T ss_pred             CCCCccccCCceEEEEeeEEeCcCCEEEecCCceEEEEEeeEEECCCCc
Confidence            99999999995 9999999999999999999999999999999987654

>d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Bacillus subtilis [TaxId: 1423]

Probab=100.00  E-value=1.7e-60  Score=479.38  Aligned_cols=290  Identities=29%  Similarity=0.469  Sum_probs=229.5

Q ss_pred             cccccccCCCcccccC---CCCCCCCC---CeEEecCCCCCCCchHHHhhh---cCCCeEEEEEeceEEEecc-------
Q 016742           61 DCSLRALAGQAEGFGR---LAIGGLHG---PLYHVTTLADDGPGSLREGCR---MKEPLWIVFEVSGTIHLRS-------  124 (383)
Q Consensus        61 ~~~~~a~~~~aeGfg~---~ttGG~gG---~v~~VTnl~d~g~GSLr~ai~---~~~Pr~IVf~vsG~I~l~~-------  124 (383)
                      |..++.|+ .++|||+   +||||.++   +||+|+|++|     |++||.   .++||+|+  ++|+|+...       
T Consensus         2 ~~~~~~~~-~~~G~As~~~gttGG~~a~~~~v~~v~t~~e-----l~~~l~~~~~~~P~vI~--~~gti~~~~~~~~~~~   73 (399)
T d1bn8a_           2 DLGHQTLG-SNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ-----LVSALGKETNTTPKIIY--IKGTIDMNVDDNLKPL   73 (399)
T ss_dssp             CGGGCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH-----HHHHHCCTTCCSCEEEE--ECSEEESSBCTTCCBC
T ss_pred             cchhhccc-CCCceeecCCCcCCCCCCCCCceEecCCHHH-----HHHHHhhccCCCceEEE--EccEEecccccccccc
Confidence            44555565 5999986   79999776   4899999999     999994   57899887  679997631       


Q ss_pred             ------------------------------------------------eeEeccCcceeeeccceEEeCCcEEEeeeccE
Q 016742          125 ------------------------------------------------HLSVSSYKTIDGRGQRVKLTGKGLRLKECEHV  156 (383)
Q Consensus       125 ------------------------------------------------~l~V~snkTI~G~G~gi~I~G~gl~i~~a~NV  156 (383)
                                                                      +|+|.|||||+|+|.+++|.|.+|+|+ ++||
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~V~SNkTIiG~G~~~~i~g~gl~i~-a~NV  152 (399)
T d1bn8a_          74 GLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIK-SDNV  152 (399)
T ss_dssp             CHHHHCCTTCCHHHHHHHTCHHHHCSSCCCSHHHHHHHHHHHHHHHHHEEEECSSEEEEECTTCCEEESCEEEEC-SEEE
T ss_pred             cccccccccccccccccccChhhhccccccccccccccccccccccceEEecCCCceEEecCCCcEEeccEEEEe-CceE
Confidence                                                            588999999999999999999999995 9999


Q ss_pred             EEeeeEEecCCC----------------CCCCceEecCCCceEEEEceeeecCC-----------------CCceEeecC
Q 016742          157 IICNLEFEGGKG----------------PDVDAIQIKPKSKHIWIDRCSLRDYD-----------------DGLIDITRE  203 (383)
Q Consensus       157 IIRnL~ir~g~~----------------~d~DaI~i~~~s~nVwIDHcs~s~~~-----------------Dglidi~~~  203 (383)
                      |||||+||....                .+.|+|+|+ +++|||||||+|+|+.                 ||+||++++
T Consensus       153 Iirnl~i~~~~~~~~~~~~~~~~~~~~~~~~DaI~i~-~s~~VWIDH~t~s~~~~e~~~~~~~~~~~~~~~Dg~lDi~~g  231 (399)
T d1bn8a_         153 IIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITIN-GGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNG  231 (399)
T ss_dssp             EEESCEEECCCCSSCEEETTSSSSCEEECCCCSEEEE-SCEEEEEESCEEECTTCCGGGCCEETTEECCCCCCSEEEETT
T ss_pred             EEeCeEEEcCcccccccccccccccCcCCCCceEEEe-cCccEEEECceeccCCcccccccccccccccccccceeeccc
Confidence            999999996531                357999998 7999999999999975                 999999999


Q ss_pred             CceEEEeCceecCCCceeEecCCCCCCCC-cceeEEEeceeecCCCCcCCccccCeeEEEcceEEcccc-------ceee
Q 016742          204 STDITVSRCHFSSHDKTMLIGADPSHVAD-RCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGI-------YAVC  275 (383)
Q Consensus       204 s~~VTIS~n~f~~H~k~~LiG~~d~~~~d-~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~-------~a~~  275 (383)
                      +++||||||+|.+|+|++|+|++++...| +.++||||||||+++.+|+||+|+|++|+|||||++|..       |++.
T Consensus       232 s~~VTvS~n~f~~h~k~~L~G~~d~~~~d~g~~~vT~hhN~f~~~~~R~Prvr~g~vHv~NNy~~n~~~~~~~~~~ya~~  311 (399)
T d1bn8a_         232 ANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEGSTSSSSYPFSYAWG  311 (399)
T ss_dssp             CEEEEEESCEEEEEEECCEECCCTTCGGGTTCCCEEEESCEEEEEEECSSEESSCEEEEESCEEECCTTCSSSCCCCSEE
T ss_pred             ceeEEeECccccCCcceeEecCCCCcccccCCceEEEEeeEecCccccCccccccEEEEEccEeECCCcccccccceeec
Confidence            99999999999999999999998865443 568999999999999999999999999999999999875       7999


Q ss_pred             ecCCceEEEEceEEecCCccceeeeeccccCCccccCcceEEecCCEEEcccccccc--ccCCcccccCCCCCCCccccC
Q 016742          276 ASVDSQIYSQCNIYEAGQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAGLM--TEAGEHSMFHPSEYYPTWTVA  353 (383)
Q Consensus       276 ~~~~a~i~~e~Nyf~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~~~~~--~~~~~~~~~~p~~~Y~~yt~~  353 (383)
                      +++++++++|+|||+.++.+.......       ......+...++++ ++......  ........|.|+  | .|+++
T Consensus       312 ~~~~a~il~EgN~F~~~~~~~~~~~~~-------~~~g~~~~~~gn~~-~g~~~~~~~~~~~~~~~~~~p~--y-~y~~~  380 (399)
T d1bn8a_         312 IGKSSKIYAQNNVIDVPGLSAAKTISV-------FSGGTALYDSGTLL-NGTQINASAANGLSSSVGWTPS--L-HGSID  380 (399)
T ss_dssp             ECTTCEEEEESCEEECTTCCSGGGEEE-------CTTCCBCEEESCEE-TTEECCHHHHTTCBSCCSCCCC--S-CCCCC
T ss_pred             cccCceEEEEeeEEECCCCcccceecc-------ccCCceEecCCcEe-cCccccCccCcCcccccccccc--c-ccccC
Confidence            999999999999999877543221110       01111233344443 33321111  011234466665  4 37899


Q ss_pred             ChHHHHHHHHHhccCCCCC
Q 016742          354 APTDNLKQVLQHCTGWQDI  372 (383)
Q Consensus       354 ~A~~a~~~vl~~~AG~q~~  372 (383)
                      +|+ ++++.|...||++++
T Consensus       381 ~A~-~v~~~V~a~AGAGkl  398 (399)
T d1bn8a_         381 ASA-NVKSNVINQAGAGKL  398 (399)
T ss_dssp             CHH-HHHHHHHHHCSTTSC
T ss_pred             CHH-HHHHHhhccCCCccc
Confidence            996 567777777999874

>d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin lyase
domain: Pectin lyase
species: Aspergillus niger, type A [TaxId: 5061]

Probab=100.00  E-value=3.1e-58  Score=456.95  Aligned_cols=221  Identities=21%  Similarity=0.238  Sum_probs=192.2

Q ss_pred             ccCCCcccccCCCCCCCCCCeEEecCCCCCCCchHHHhhhcCCCeEEEEEeceEEE------------------------
Q 016742           66 ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIH------------------------  121 (383)
Q Consensus        66 a~~~~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~ai~~~~Pr~IVf~vsG~I~------------------------  121 (383)
                      .+.+.|||||+.||||++|++|+|||++|     ||+||++++||+|+|+  |+|+                        
T Consensus         2 ~v~~~a~Gfa~~ttGG~~g~~~~Vtt~~e-----L~~al~~~~PriI~~~--g~~d~~~~~~~~~~~~~~~~~~~~~~~~   74 (359)
T d1idka_           2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE-----LVSYLGDDEARVIVLT--KTFDFTDSEGTTTGTGCAPWGTASACQV   74 (359)
T ss_dssp             CCCSCCCGGGTTCCTTTTCCCBCCCSHHH-----HHHHHHSSSCEEEEEC--SEEECTTTTCEEEEEEECTTCSSTTBCE
T ss_pred             CccccCcccccCCCCCCCCeEEEeCCHHH-----HHHHhcCCCCeEEEEc--ceEecccccccccccccccccccccccc
Confidence            35689999999999999999999999999     9999999999999974  5554                        


Q ss_pred             -------------------------ecceeEeccCcceeeeccceEEeCCcEEE-eeeccEEEeeeEEecCCC---CCCC
Q 016742          122 -------------------------LRSHLSVSSYKTIDGRGQRVKLTGKGLRL-KECEHVIICNLEFEGGKG---PDVD  172 (383)
Q Consensus       122 -------------------------l~~~l~V~snkTI~G~G~gi~I~G~gl~i-~~a~NVIIRnL~ir~g~~---~d~D  172 (383)
                                               ++.+|+|.|||||+|+|.+++|.|.+|.| ++++|||||||+||++..   ++.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~sn~TI~G~g~~~~i~g~g~~i~~~~~NVIiRNl~i~~~~~~~~~~~D  154 (359)
T d1idka_          75 AIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGD  154 (359)
T ss_dssp             EECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCC
T ss_pred             ccccccccccccccCccceeeeeccCCCceEeCCCceEEeccCCeEEecCceEEEecCceEEEECcEEecCCCCCCCCCC
Confidence                                     33468999999999999999999999988 569999999999998653   4579


Q ss_pred             ceEecCCCceEEEEceeeecCCCCce-EeecCCceEEEeCceecCCCceeEecCCCCC----CCCcceeEEEeceeecCC
Q 016742          173 AIQIKPKSKHIWIDRCSLRDYDDGLI-DITRESTDITVSRCHFSSHDKTMLIGADPSH----VADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       173 aI~i~~~s~nVwIDHcs~s~~~Dgli-di~~~s~~VTIS~n~f~~H~k~~LiG~~d~~----~~d~~~~VT~hhN~f~~~  247 (383)
                      +|+|+ +++|||||||+|+|..|+.+ +..+.+++||||||+|.+|.+.++++.....    ..+...+||||||||+++
T Consensus       155 aI~i~-~s~nVwIDH~s~s~~~d~~~~~~~~~s~~vTis~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vT~hhN~f~~~  233 (359)
T d1idka_         155 AITLD-DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHT  233 (359)
T ss_dssp             SEEEC-SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESB
T ss_pred             eEEee-CCccEEEEeeeeccCCCCceeeeccCCCceeeeceeeeccccccccccccccCCceecCCCccEEEEeeEEccC
Confidence            99998 89999999999999999976 5567899999999999988776655433211    122346999999999999


Q ss_pred             CCcCCccccC-eeEEEcceEEccccceeeecCCceEEEEceEEecCCc
Q 016742          248 RQRHPRVRYA-KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQK  294 (383)
Q Consensus       248 ~~R~Pr~r~G-~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~  294 (383)
                      .+|+||+|+| .+|++||||+||..|++.+++++++++|+|||+....
T Consensus       234 ~~R~P~~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~  281 (359)
T d1idka_         234 SGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDT  281 (359)
T ss_dssp             CSCTTEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEE
T ss_pred             CCCCceecccceEEEECcEEECccceEEecCCceeEEEeceEEeCCcC
Confidence            9999999998 6999999999999999999999999999999986543

>d1o88a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type C [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type C [TaxId: 556]

Probab=100.00  E-value=2.8e-47  Score=377.03  Aligned_cols=277  Identities=20%  Similarity=0.235  Sum_probs=210.0

Q ss_pred             CcccccCCCCCCCCCCeEEecCCCCCCCchHHHh-hhcCCCeEEEEEeceEEEecceeEeccCcceeeeccceEEeCCcE
Q 016742           70 QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREG-CRMKEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKGL  148 (383)
Q Consensus        70 ~aeGfg~~ttGG~gG~v~~VTnl~d~g~GSLr~a-i~~~~Pr~IVf~vsG~I~l~~~l~V~snkTI~G~G~gi~I~G~gl  148 (383)
                      ..++.|+.+.||+.+.+++|+.+.|...+.+..- ..+.. ..    ..+.+    .+.+.+++||+|+  ...+.+.+|
T Consensus        37 ~~~~~g~~~~gg~~~~vi~~~G~~d~~~~~~~~~~~~~~~-~~----~~~~~----i~~~~~~i~i~G~--~~~~~~~gl  105 (353)
T d1o88a_          37 RLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWS-KD----PRGVE----IKEFTKGITIIGA--NGSSANFGI  105 (353)
T ss_dssp             TBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTTGGGSTT-SC----CCEEE----EESBCSCEEEEEC--TTCCBSSEE
T ss_pred             ccccccceecCCCeEEEEEEeeeeecccCccccccccccc-cc----ccCcE----EEecCCCEEEEcC--CCccccceE
Confidence            4667778888888899999998887433222221 11110 00    01111    1223456677665  556788999


Q ss_pred             EEeeeccEEEeeeEEecCCC--CCCCceEecCCCceEEEEceeeecCCC-------------CceEeecCCceEEEeCce
Q 016742          149 RLKECEHVIICNLEFEGGKG--PDVDAIQIKPKSKHIWIDRCSLRDYDD-------------GLIDITRESTDITVSRCH  213 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~--~d~DaI~i~~~s~nVwIDHcs~s~~~D-------------glidi~~~s~~VTIS~n~  213 (383)
                      .|.+++|||||||+||.+..  .+.|+|.++ +++|||||||+|+|..|             +++|+++++++||||||+
T Consensus       106 ~i~~~~nViirnl~i~~~~~~~~~~D~i~~~-~~~~vwIDH~s~s~~~d~~~~~~~~~~~~~~~~di~~~~~~vTis~n~  184 (353)
T d1o88a_         106 WIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNY  184 (353)
T ss_dssp             EEESCCSEEEESCEEECCSCGGGTCCSEEEE-SCCSEEEESCEEECCSCCCTTCGGGTCSSCCSEEEESSCCEEEEESCE
T ss_pred             EEeccceEEEeCcEEecCCCCCCCCcEEEEe-cccEEEEEccEEeccccccccccCccccceeeEEeccCcccEEEECcc
Confidence            99999999999999997653  467999998 79999999999999765             578999999999999999


Q ss_pred             ecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCCccccCeeEEEcceEEccccceeeecCCceEEEEceEEecCC
Q 016742          214 FSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRYAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       214 f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~  293 (383)
                      |.+|.|++|+|+++...   ..+||||||||+++.+|+||+|+|.+|++||||+||..|+++.++++++++|+|||++.+
T Consensus       185 ~~~~~k~~l~g~~~~~~---~~~vT~hhN~~~~~~~R~P~~~~g~~h~~NN~~~n~~~~~~~~~~~~~~~~e~N~f~~~~  261 (353)
T d1o88a_         185 IHGVKKVGLDGSSSSDT---GRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAI  261 (353)
T ss_dssp             EEEEEECCEESSSSSCC---CCEEEEESCEEEEEEECSCEEESSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEE
T ss_pred             cccccccceeCCccCcC---CceEEEEeeEEcCCccCCcceecceEEEEEEEEecccceEEecCCCceEEEEeeEEeccc
Confidence            99999999999876432   348999999999999999999999999999999999999999999999999999999987


Q ss_pred             ccceeeeeccccCCccccCcceEEecCCEEEcccccc-------------ccccCCcccccCCCCCCCccccCChHHHHH
Q 016742          294 KKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQAG-------------LMTEAGEHSMFHPSEYYPTWTVAAPTDNLK  360 (383)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~~~-------------~~~~~~~~~~~~p~~~Y~~yt~~~A~~a~~  360 (383)
                      .+....+        +....|++...++.+..+....             ..........+.|+.+| .|++++|+ .++
T Consensus       262 ~p~~~~~--------~~~~~g~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~t~~~A~-~v~  331 (353)
T d1o88a_         262 NPVTSRY--------DGKNFGTWVLKGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAY-NYSPVSAQ-CVK  331 (353)
T ss_dssp             SSEEECS--------SSSSCCEEEEESCSCCSTTHHHHTTEECCCCSSCCEECTTCCCCSCCCCCCS-CCCCCCHH-HHH
T ss_pred             CCccccc--------cCCcceeEEECCCeeecccccccccccccccccccccCCcccccccccCCCc-ccccCCHH-HHH
Confidence            7643221        2335678888888776543210             00001122356677778 59999996 578


Q ss_pred             HHHHhccCCCC
Q 016742          361 QVLQHCTGWQD  371 (383)
Q Consensus       361 ~vl~~~AG~q~  371 (383)
                      +.|.++||+++
T Consensus       332 ~~V~~~AGaGk  342 (353)
T d1o88a_         332 DKLPGYAGVGK  342 (353)
T ss_dssp             HHGGGTSSSSS
T ss_pred             HHHHhcCCCCC
Confidence            88888899999

>d1bhea_ b.80.1.3 (A:) Polygalacturonase {Erwinia carotovora, subsp. carotovora [TaxId: 554]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Erwinia carotovora, subsp. carotovora [TaxId: 554]

Probab=98.71  E-value=1.1e-07  Score=92.40  Aligned_cols=94  Identities=20%  Similarity=0.347  Sum_probs=62.2

Q ss_pred             EEEeeeccEEEeeeEEecCC------------------------CCCCCceEecCCCceEEEEceeeecCCCCceEeecC
Q 016742          148 LRLKECEHVIICNLEFEGGK------------------------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRE  203 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~------------------------~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~  203 (383)
                      |.+.+++||.|++|+|+...                        ....|||.+. .++||||+.|.|....|. |.++..
T Consensus       154 i~~~~~~nv~i~~iti~ns~~~~~~~~~~~~v~i~n~~I~~~~~~~NtDGidi~-~s~nv~I~n~~i~~gDD~-i~~ks~  231 (376)
T d1bhea_         154 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPM-SSKNITIAYSNIATGDDN-VAIKAY  231 (376)
T ss_dssp             EEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEE-SCEEEEEESCEEECSSCS-EEEEEC
T ss_pred             EEEEecccEEEEeeEEecCCceEEEEeCCceEEEEeEeccCCccCCCcceeecc-ccceEEEEeceeecCCCc-eeeecc
Confidence            66666777777777777532                        1235888886 688888888888655444 666542


Q ss_pred             -----CceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCC
Q 016742          204 -----STDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       204 -----s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~  248 (383)
                           +.||+|.+|.|.. ..++.||+...    ...+|+|++|.|.++.
T Consensus       232 ~~~~~~~ni~i~n~~~~~-~~g~~iGs~~~----~v~nv~i~n~~~~~~~  276 (376)
T d1bhea_         232 KGRAETRNISILHNDFGT-GHGMSIGSETM----GVYNVTVDDLKMNGTT  276 (376)
T ss_dssp             TTSCCEEEEEEEEEEECS-SSCEEEEEEES----SEEEEEEEEEEEESCS
T ss_pred             cCCCCcceEEEEeeEEec-CCCceeccccC----CEEEEEEEeeeEcCCC
Confidence                 4578888888864 44677776421    1247888888877653

>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus [TaxId: 984]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Chondroitinase B
domain: Chondroitinase B
species: Pedobacter heparinus [TaxId: 984]

Probab=98.51  E-value=1.4e-06  Score=85.47  Aligned_cols=192  Identities=18%  Similarity=0.232  Sum_probs=110.5

Q ss_pred             hHHHhhhcCCCeEEEEEeceEEEecceeEe------ccCcceeeec-cceEEeCC-cEEEeeeccEEEeeeEEecCCC--
Q 016742           99 SLREGCRMKEPLWIVFEVSGTIHLRSHLSV------SSYKTIDGRG-QRVKLTGK-GLRLKECEHVIICNLEFEGGKG--  168 (383)
Q Consensus        99 SLr~ai~~~~Pr~IVf~vsG~I~l~~~l~V------~snkTI~G~G-~gi~I~G~-gl~i~~a~NVIIRnL~ir~g~~--  168 (383)
                      +|++||+...|.-.|+-..|+.+- ..|.+      ...+||.+.+ ..+.|.|. .|+|. +++|+|++|+|+.+..  
T Consensus         8 tiq~Ai~~a~pGDtI~l~~GtY~~-~~i~~~~~Gt~~~pIti~a~~~g~v~i~G~s~i~i~-g~~v~i~Gl~~~~~~~~~   85 (481)
T d1ofla_           8 TLYQVVKEVKPGGLVQIADGTYKD-VQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELR-GEHLILEGIWFKDGNRAI   85 (481)
T ss_dssp             HHHHHHHHCCTTCEEEECSEEEET-CEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEEC-SSSEEEESCEEEEECCCG
T ss_pred             HHHHHHHhCCCCCEEEECCCEEEc-CEEEeccCcccCCCEEEEeCCCCceEEcCCCeEEEE-eCCEEEeCeEEECCCCcc
Confidence            599999987776555557788752 23333      3458999984 45677775 47775 7899999999997532  


Q ss_pred             ----CCCCceEecCCCceEEEEceeeecCCCCc---eEee-----cCCceEEEeCceecCC-CceeEe--cCCCCCC---
Q 016742          169 ----PDVDAIQIKPKSKHIWIDRCSLRDYDDGL---IDIT-----RESTDITVSRCHFSSH-DKTMLI--GADPSHV---  230 (383)
Q Consensus       169 ----~d~DaI~i~~~s~nVwIDHcs~s~~~Dgl---idi~-----~~s~~VTIS~n~f~~H-~k~~Li--G~~d~~~---  230 (383)
                          ....++... .+.++.|++|.+.......   .+..     ....+.+|++|.|..- ..+..+  .......   
T Consensus        86 ~~~~~~~~~~~~~-~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~n~~I~~n~~~~~~~~G~~i~~~~~~~~~~~~  164 (481)
T d1ofla_          86 QAWKSHGPGLVAI-YGSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDG  164 (481)
T ss_dssp             GGCCTTSCCSEEE-CSSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCC
T ss_pred             ceeeccCCceEEe-EeecceEeeeEeecccccccceeccceeEEEeeccceEEECceEecCCCCccEEEecCCCceeecC
Confidence                123344333 4678889999887643321   1111     2246789999998742 122222  1111110   


Q ss_pred             -C-CcceeEEEeceeecCCCCcCCccc---c-------CeeEEEcceEEcccc-ceeeecCCceEEEEceEEecCC
Q 016742          231 -A-DRCIRVTIHHCFFDGTRQRHPRVR---Y-------AKVHLYNNYTRNWGI-YAVCASVDSQIYSQCNIYEAGQ  293 (383)
Q Consensus       231 -~-d~~~~VT~hhN~f~~~~~R~Pr~r---~-------G~~hv~NN~~~n~~~-~a~~~~~~a~i~~e~Nyf~~g~  293 (383)
                       . .......+++|+|.++..+.+...   .       ....+.||++++... ..+.........+++|+|....
T Consensus       165 ~~~~~~~~~~I~~n~~~~~~~~gn~~~~i~~G~s~~~~sn~~v~nN~~~~~~g~~~ii~~~s~~n~I~nN~~~~~~  240 (481)
T d1ofla_         165 SVGGPAMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQ  240 (481)
T ss_dssp             SCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBTCEEESCEEESCS
T ss_pred             cccccccccEEEeeEecCccccCCceeEEEeeeEeeccCCEEEEeeeEEccCCceEEEEecCCCcEEeeeEEecCc
Confidence             0 112245678888876555544321   1       245777887775432 2332222334456777776543

>d1czfa_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId: 5061]

Probab=98.43  E-value=2.7e-06  Score=81.35  Aligned_cols=72  Identities=18%  Similarity=0.256  Sum_probs=52.0

Q ss_pred             CCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecC-CCcee-EecCCCCCCCCcceeEEEeceeecCC
Q 016742          170 DVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS-HDKTM-LIGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       170 d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~-H~k~~-LiG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      ..|||.+. ++++|+|++|.|....|. |.++ ...+|+|++|.+.. |.-.+ -+|...   ...-.+|+|.++.|.++
T Consensus       151 NtDGidi~-~s~nV~I~n~~i~tgDDc-Iaik-s~~ni~i~n~~c~~~hG~sigslG~~~---~~~v~nV~v~n~~i~~t  224 (335)
T d1czfa_         151 NTDAFDVG-NSVGVNIIKPWVHNQDDC-LAVN-SGENIWFTGGTCIGGHGLSIGSVGDRS---NNVVKNVTIEHSTVSNS  224 (335)
T ss_dssp             SCCSEEEC-SCEEEEEESCEEECSSCS-EEES-SEEEEEEESCEEESSCCEEEEEECSSS---CCEEEEEEEEEEEEEEE
T ss_pred             CCCceEec-CCCeEEEEeeEEecCCce-EEec-CceEEEEEEEEEECCCCccccccCCCC---cCCEeEEEEEeeEEECC
Confidence            46999997 799999999999876665 8885 45799999998863 43222 245321   22235899999988765

>d1ia5a_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Aspergillus aculeatus) [TaxId: 5053]

Probab=98.15  E-value=1.3e-05  Score=76.87  Aligned_cols=101  Identities=16%  Similarity=0.255  Sum_probs=71.4

Q ss_pred             cEEEeeeccEEEeeeEEecCC-----CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecC-CCce
Q 016742          147 GLRLKECEHVIICNLEFEGGK-----GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS-HDKT  220 (383)
Q Consensus       147 gl~i~~a~NVIIRnL~ir~g~-----~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~-H~k~  220 (383)
                      .|.+..++||.|+||+|+...     ....|||.+. .+++|+|++|.|....|. |.++ ...+|+|++|.+.. |.-.
T Consensus       129 ~~~~~~s~nv~i~~v~I~~~~~~~~~~~NtDGidi~-~s~nV~I~n~~i~~gDDc-Iaik-s~~ni~i~n~~c~~ghG~s  205 (339)
T d1ia5a_         129 VFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIG-TSTYVTISGATVYNQDDC-VAVN-SGENIYFSGGYCSGGHGLS  205 (339)
T ss_dssp             CEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEE-SCEEEEEESCEEECSSCS-EEES-SEEEEEEESCEEESSSCEE
T ss_pred             EEEEecccEEEEEEEEEecccCCccCCCCCCccccC-CCCeEEEeeeEEEcCCCe-EEec-CccEEEEEEeEEeccccce
Confidence            366667889999999987532     2356999997 799999999999976665 8885 46899999999974 3322


Q ss_pred             e-EecCCCCCCCCcceeEEEeceeecCCCCcCCcc
Q 016742          221 M-LIGADPSHVADRCIRVTIHHCFFDGTRQRHPRV  254 (383)
Q Consensus       221 ~-LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~  254 (383)
                      + -+|...   ...-.+|+|.++.|.+.. +.-|+
T Consensus       206 igslG~~~---~~~v~nV~v~n~~~~~t~-~GirI  236 (339)
T d1ia5a_         206 IGSVGGRS---DNTVKNVTFVDSTIINSD-NGVRI  236 (339)
T ss_dssp             EEEECSSS---CCEEEEEEEEEEEEESCS-EEEEE
T ss_pred             ecccccCc---cccEEEEEEECCcccCCc-ceeEE
Confidence            2 245432   122358999999888653 33344

>d1ia5a_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Aspergillus aculeatus) [TaxId: 5053]

Probab=98.12  E-value=3.4e-05  Score=73.79  Aligned_cols=147  Identities=16%  Similarity=0.179  Sum_probs=99.8

Q ss_pred             cCcceeeeccceEEeCCc------------------EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeee
Q 016742          130 SYKTIDGRGQRVKLTGKG------------------LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLR  191 (383)
Q Consensus       130 snkTI~G~G~gi~I~G~g------------------l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s  191 (383)
                      +|+||.|.|. .+|.|.|                  |.+.+++||.|++|+|+....   =.|.+. .+++|.|+++++.
T Consensus        72 ~ni~i~G~g~-g~IDG~G~~wW~~~~~~~~~~rP~~l~~~~~~nv~i~gitl~nsp~---w~~~~~-~s~nv~i~~v~I~  146 (339)
T d1ia5a_          72 SDLTITGASG-HSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV---QVFSVA-GSDYLTLKDITID  146 (339)
T ss_dssp             ESCEEEECTT-CEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS---CCEEEE-SCEEEEEESCEEE
T ss_pred             eeEEEEecCC-CeEeCCchhhhhcccCCCCCCCCeEEEEEecCCCEEeceEEEcCCc---eEEEEe-cccEEEEEEEEEe
Confidence            6777777653 2566543                  778889999999999998653   467786 7999999999985


Q ss_pred             c---------CCCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCC-ccc------
Q 016742          192 D---------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHP-RVR------  255 (383)
Q Consensus       192 ~---------~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~P-r~r------  255 (383)
                      .         ..|| ||+ ..+++|+|++|.|..-+-++-+...        .++++.++++.....-.- .+.      
T Consensus       147 ~~~~~~~~~~NtDG-idi-~~s~nV~I~n~~i~~gDDcIaiks~--------~ni~i~n~~c~~ghG~sigslG~~~~~~  216 (339)
T d1ia5a_         147 NSDGDDNGGHNTDA-FDI-GTSTYVTISGATVYNQDDCVAVNSG--------ENIYFSGGYCSGGHGLSIGSVGGRSDNT  216 (339)
T ss_dssp             CGGGTTTTCCSCCS-EEE-ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEESSSCEEEEEECSSSCCE
T ss_pred             cccCCccCCCCCCc-ccc-CCCCeEEEeeeEEEcCCCeEEecCc--------cEEEEEEeEEeccccceecccccCcccc
Confidence            3         4699 899 4689999999999988777777642        267887777754332110 011      


Q ss_pred             cCeeEEEcceEEccccceeee----cCC---ceEEEEceEEecC
Q 016742          256 YAKVHLYNNYTRNWGIYAVCA----SVD---SQIYSQCNIYEAG  292 (383)
Q Consensus       256 ~G~~hv~NN~~~n~~~~a~~~----~~~---a~i~~e~Nyf~~g  292 (383)
                      .-.+++.|+.+++.. +++..    +.+   ..|.+|+..++..
T Consensus       217 v~nV~v~n~~~~~t~-~GirIKt~~g~~G~v~nV~f~ni~~~~v  259 (339)
T d1ia5a_         217 VKNVTFVDSTIINSD-NGVRIKTNIDTTGSVSDVTYKDITLTSI  259 (339)
T ss_dssp             EEEEEEEEEEEESCS-EEEEEEEETTCCCEEEEEEEEEEEEEEE
T ss_pred             EEEEEEECCcccCCc-ceeEEeeeCCCCEEEEEEEEEEEEEecc
Confidence            114688888887753 34322    111   2455666666654

>d1hg8a_ b.80.1.3 (A:) Polygalacturonase {Fusarium moniliforme [TaxId: 117187]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fusarium moniliforme [TaxId: 117187]

Probab=98.09  E-value=6.2e-05  Score=71.95  Aligned_cols=101  Identities=19%  Similarity=0.298  Sum_probs=68.9

Q ss_pred             EEEeeeccEEEeeeEEecCC-------------CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCcee
Q 016742          148 LRLKECEHVIICNLEFEGGK-------------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHF  214 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~-------------~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f  214 (383)
                      |.+.+++||.|+||+|+...             ....|||.+. ++++|+|++|.|....|. |.++ ...+|+|++|.|
T Consensus       130 ~~~~~~~nv~i~~i~I~~~~~~~~~~~~~~~~~~~NtDGiDi~-~s~nv~I~n~~i~~gDD~-iaik-~~~ni~i~n~~~  206 (349)
T d1hg8a_         130 FDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDIS-SSDHVTLDNNHVYNQDDC-VAVT-SGTNIVVSNMYC  206 (349)
T ss_dssp             EEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEE-SCEEEEEEEEEEECSSCS-EEES-SEEEEEEEEEEE
T ss_pred             EEEeccceEEEEEEEEECCCcccccccccCccccCCCCeEeeC-CCCeEEEEeeeecCCCCc-eEec-cccceEEEEEEE
Confidence            34445677777777776421             1246999997 799999999999987775 7885 468999999999


Q ss_pred             cC-CCceeE-ecCCCCCCCCcceeEEEeceeecCCCCcCCccc
Q 016742          215 SS-HDKTML-IGADPSHVADRCIRVTIHHCFFDGTRQRHPRVR  255 (383)
Q Consensus       215 ~~-H~k~~L-iG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r  255 (383)
                      .. |...+. +|...   ...-.+|+|-++.+.+.. |..|++
T Consensus       207 ~~ghg~sigs~G~~~---~~~v~nV~v~n~~~~~~~-~g~rIK  245 (349)
T d1hg8a_         207 SGGHGLSIGSVGGKS---DNVVDGVQFLSSQVVNSQ-NGCRIK  245 (349)
T ss_dssp             ESSCCEEEEEESSSS---CCEEEEEEEEEEEEEEEE-EEEEEE
T ss_pred             eCCcccccccCCCcc---cccEEEEEEEcceecCCc-ceEEEE
Confidence            74 544332 45432   122358888888886543 445553

>d1rmga_ b.80.1.3 (A:) Rhamnogalacturonase A {Aspergillus aculeatus [TaxId: 5053]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Rhamnogalacturonase A
species: Aspergillus aculeatus [TaxId: 5053]

Probab=98.05  E-value=3.4e-05  Score=75.72  Aligned_cols=109  Identities=12%  Similarity=0.283  Sum_probs=79.8

Q ss_pred             cCcceeeeccceEEeCC---cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCce
Q 016742          130 SYKTIDGRGQRVKLTGK---GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTD  206 (383)
Q Consensus       130 snkTI~G~G~gi~I~G~---gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~  206 (383)
                      +|.+|.|    +++...   .|.+.+++||.|+||+|+.......|||.+. . +||||.+|.+... |.+|.++.++.+
T Consensus       136 ~n~~i~g----it~~nsp~~~i~i~~c~~v~i~nv~I~~~~~~NtDGIdi~-~-snv~I~n~~i~~g-DDcIaiks~s~n  208 (422)
T d1rmga_         136 THFSVHD----IILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVW-G-SNIWVHDVEVTNK-DECVTVKSPANN  208 (422)
T ss_dssp             EEEEEEE----EEEECCSSCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEE-E-EEEEEEEEEEESS-SEEEEEEEEEEE
T ss_pred             eeeEEEC----cEecCCCceEEEEeccccEEEEeeEEcCCCCCccceEeec-c-cEEEEEeeEEEcC-CCccccCCCCcc
Confidence            3555554    345443   4777789999999999998655557999996 4 6899999999765 456899989999


Q ss_pred             EEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCC
Q 016742          207 ITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       207 VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~  248 (383)
                      |+|+++.+. +..++-||+....  ..-.+|+|.+++|.++.
T Consensus       209 I~i~n~~c~-~g~GisiGs~g~~--~~V~nV~v~n~~~~~s~  247 (422)
T d1rmga_         209 ILVESIYCN-WSGGCAMGSLGAD--TDVTDIVYRNVYTWSSN  247 (422)
T ss_dssp             EEEEEEEEE-SSSEEEEEEECTT--EEEEEEEEEEEEEESSS
T ss_pred             EEEEeeEEc-cccceeEeeccCC--CCEEEEEEEeEEEeCCC
Confidence            999998876 4457777763211  11247899999887654

>d1hg8a_ b.80.1.3 (A:) Polygalacturonase {Fusarium moniliforme [TaxId: 117187]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fusarium moniliforme [TaxId: 117187]

Probab=97.95  E-value=2.7e-05  Score=74.51  Aligned_cols=153  Identities=17%  Similarity=0.196  Sum_probs=98.8

Q ss_pred             eEec-cCc-ceeeeccce------E---EeCC---cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeee
Q 016742          126 LSVS-SYK-TIDGRGQRV------K---LTGK---GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLR  191 (383)
Q Consensus       126 l~V~-snk-TI~G~G~gi------~---I~G~---gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s  191 (383)
                      |.|. +.. ||+|+|+.-      .   ....   -|.+..++||.|++|+++....   =.+.+. .+++|+||++++.
T Consensus        71 i~I~G~G~g~IDG~G~~ww~~~~~~~~~~~~p~p~~i~~~~~~nv~i~~i~l~nsp~---w~~~~~-~~~nv~i~~i~I~  146 (349)
T d1hg8a_          71 ITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV---HCFDIT-GSSQLTISGLILD  146 (349)
T ss_dssp             CEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS---EEEEEE-SCEEEEEEEEEEE
T ss_pred             EEEEecCCCEEeCCChHHhcccccCCCCCCCCcceEEEEeccCCeEEEeeEEeCCCc---eEEEEe-ccceEEEEEEEEE
Confidence            4453 334 999997531      0   0011   1455679999999999997643   457776 7999999999984


Q ss_pred             c-----------------CCCCceEeecCCceEEEeCceecCCCceeEecCCCCCCCCcceeEEEeceeecCCCCcCC-c
Q 016742          192 D-----------------YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVADRCIRVTIHHCFFDGTRQRHP-R  253 (383)
Q Consensus       192 ~-----------------~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~P-r  253 (383)
                      .                 ..|| ||+ ..+++|+|.+|.|...+-++-+...        .+|++-+|+|.+...-.- .
T Consensus       147 ~~~~~~~~~~~~~~~~~~NtDG-iDi-~~s~nv~I~n~~i~~gDD~iaik~~--------~ni~i~n~~~~~ghg~sigs  216 (349)
T d1hg8a_         147 NRAGDKPNAKSGSLPAAHNTDG-FDI-SSSDHVTLDNNHVYNQDDCVAVTSG--------TNIVVSNMYCSGGHGLSIGS  216 (349)
T ss_dssp             CGGGSSCCTTTTTSCSCCSCCS-EEE-ESCEEEEEEEEEEECSSCSEEESSE--------EEEEEEEEEEESSCCEEEEE
T ss_pred             CCCcccccccccCccccCCCCe-Eee-CCCCeEEEEeeeecCCCCceEeccc--------cceEEEEEEEeCCccccccc
Confidence            3                 4699 898 4689999999999987766666532        378898888865322110 0


Q ss_pred             c---ccC---eeEEEcceEEccccceeee----cCC---ceEEEEceEEecCC
Q 016742          254 V---RYA---KVHLYNNYTRNWGIYAVCA----SVD---SQIYSQCNIYEAGQ  293 (383)
Q Consensus       254 ~---r~G---~~hv~NN~~~n~~~~a~~~----~~~---a~i~~e~Nyf~~g~  293 (383)
                      +   ..+   .+++.|+.+.+.. +++..    +.+   ..|.+|+..++...
T Consensus       217 ~G~~~~~~v~nV~v~n~~~~~~~-~g~rIKs~~g~gG~v~nI~~~ni~~~~v~  268 (349)
T d1hg8a_         217 VGGKSDNVVDGVQFLSSQVVNSQ-NGCRIKSNSGATGTINNVTYQNIALTNIS  268 (349)
T ss_dssp             ESSSSCCEEEEEEEEEEEEEEEE-EEEEEEEETTCCEEEEEEEEEEEEEEEEE
T ss_pred             CCCcccccEEEEEEEcceecCCc-ceEEEEEEcCCCccEEEeEEEEEEEcCcc
Confidence            1   111   3678888887643 23211    111   24666776676654

>d1rmga_ b.80.1.3 (A:) Rhamnogalacturonase A {Aspergillus aculeatus [TaxId: 5053]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Rhamnogalacturonase A
species: Aspergillus aculeatus [TaxId: 5053]

Probab=97.86  E-value=0.00038  Score=68.04  Aligned_cols=84  Identities=14%  Similarity=0.250  Sum_probs=65.4

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec----CCCCceEeecCCceEEEeCceecCCCceeEe
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD----YDDGLIDITRESTDITVSRCHFSSHDKTMLI  223 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~----~~Dglidi~~~s~~VTIS~n~f~~H~k~~Li  223 (383)
                      |++.+++|+.|++|+++....   -.|.+. ++++|.|+++++..    ..|| ||+.  +.+|+|++|.|..-+-++-|
T Consensus       130 l~~~~~~n~~i~git~~nsp~---~~i~i~-~c~~v~i~nv~I~~~~~~NtDG-Idi~--~snv~I~n~~i~~gDDcIai  202 (422)
T d1rmga_         130 LRLTDVTHFSVHDIILVDAPA---FHFTMD-TCSDGEVYNMAIRGGNEGGLDG-IDVW--GSNIWVHDVEVTNKDECVTV  202 (422)
T ss_dssp             EEEEEEEEEEEEEEEEECCSS---CSEEEE-EEEEEEEEEEEEECCSSTTCCS-EEEE--EEEEEEEEEEEESSSEEEEE
T ss_pred             EEEEeeeeeEEECcEecCCCc---eEEEEe-ccccEEEEeeEEcCCCCCccce-Eeec--ccEEEEEeeEEEcCCCcccc
Confidence            778889999999999998643   467886 78999999999974    3588 7884  35899999999988777766


Q ss_pred             cCCCCCCCCcceeEEEeceeec
Q 016742          224 GADPSHVADRCIRVTIHHCFFD  245 (383)
Q Consensus       224 G~~d~~~~d~~~~VT~hhN~f~  245 (383)
                      ...       ..+|++.++++.
T Consensus       203 ks~-------s~nI~i~n~~c~  217 (422)
T d1rmga_         203 KSP-------ANNILVESIYCN  217 (422)
T ss_dssp             EEE-------EEEEEEEEEEEE
T ss_pred             CCC-------CccEEEEeeEEc
Confidence            543       236777666554

>d1nhca_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId: 5061]

Probab=97.78  E-value=0.00013  Score=69.52  Aligned_cols=94  Identities=18%  Similarity=0.373  Sum_probs=67.1

Q ss_pred             EEEeeeccEEEeeeEEecCC-----CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecC-CCcee
Q 016742          148 LRLKECEHVIICNLEFEGGK-----GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS-HDKTM  221 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~-----~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~-H~k~~  221 (383)
                      |.+ .++||.|+||+|....     ....|||.+. .+++|+|..|.|....| .|.++. ..+|+|++|.+.. |.-.+
T Consensus       126 i~i-~~~nv~i~nv~I~~~~~~~~~~~NtDGidi~-~s~nv~I~n~~i~~gDD-cIaik~-g~ni~i~n~~c~~~~g~si  201 (336)
T d1nhca_         126 ISV-QATNVHLNDFTIDNSDGDDNGGHNTDGFDIS-ESTGVYISGATVKNQDD-CIAINS-GESISFTGGTCSGGHGLSI  201 (336)
T ss_dssp             EEE-EEEEEEEESCEEECTTHHHHTCCSCCSEEEC-SCEEEEEESCEEESSSE-EEEESS-EEEEEEESCEEESSSEEEE
T ss_pred             EEE-eeeEEEEEEEEEECcCCCccccCCCceEEcC-CccCEeEecceEeecCC-cEEeec-cceEEEEEeeeccccccee
Confidence            555 3788888888888643     2356999997 78999999999985554 588864 5799999998863 33332


Q ss_pred             -EecCCCCCCCCcceeEEEeceeecCCC
Q 016742          222 -LIGADPSHVADRCIRVTIHHCFFDGTR  248 (383)
Q Consensus       222 -LiG~~d~~~~d~~~~VT~hhN~f~~~~  248 (383)
                       -+|...   .+.-.+|+|.++.|.+..
T Consensus       202 gslG~~~---~~~v~nV~v~n~~~~~t~  226 (336)
T d1nhca_         202 GSVGGRD---DNTVKNVTISDSTVSNSA  226 (336)
T ss_dssp             EEESSSS---CCEEEEEEEEEEEEESCS
T ss_pred             eeccccc---cccEEEEEEEeceeeCCC
Confidence             255432   222358999999987753

>d1nhca_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Aspergillus niger), endo-polygalacturonase I [TaxId: 5061]

Probab=97.66  E-value=0.0011  Score=62.91  Aligned_cols=130  Identities=15%  Similarity=0.200  Sum_probs=86.5

Q ss_pred             EEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec---------CCCCceEeecCCceEEEeCceecCCC
Q 016742          148 LRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD---------YDDGLIDITRESTDITVSRCHFSSHD  218 (383)
Q Consensus       148 l~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~---------~~Dglidi~~~s~~VTIS~n~f~~H~  218 (383)
                      |.+.+++||.|++|+|+....+   .|.+.  ++||.|++..+..         ..|| ||+ ..+.+|+|.+|.|..-+
T Consensus       103 i~~~~~~nv~i~giti~nsp~~---~i~i~--~~nv~i~nv~I~~~~~~~~~~~NtDG-idi-~~s~nv~I~n~~i~~gD  175 (336)
T d1nhca_         103 MYIHDVEDSTFKGINIKNTPVQ---AISVQ--ATNVHLNDFTIDNSDGDDNGGHNTDG-FDI-SESTGVYISGATVKNQD  175 (336)
T ss_dssp             EEEEEEEEEEEESCEEECCSSC---CEEEE--EEEEEEESCEEECTTHHHHTCCSCCS-EEE-CSCEEEEEESCEEESSS
T ss_pred             EEEeccCCcEEEeEEEEcCCce---EEEEe--eeEEEEEEEEEECcCCCccccCCCce-EEc-CCccCEeEecceEeecC
Confidence            7888999999999999986544   46664  6899999999863         4699 899 46899999999999877


Q ss_pred             ceeEecCCCCCCCCcceeEEEeceeecCCCCc-CCccc------cCeeEEEcceEEccccceeee----cCC---ceEEE
Q 016742          219 KTMLIGADPSHVADRCIRVTIHHCFFDGTRQR-HPRVR------YAKVHLYNNYTRNWGIYAVCA----SVD---SQIYS  284 (383)
Q Consensus       219 k~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R-~Pr~r------~G~~hv~NN~~~n~~~~a~~~----~~~---a~i~~  284 (383)
                      -+.-+...        .++++-++.+.....- .-.+.      .-.++|.|+.+.+.. +++..    +.+   ..|.+
T Consensus       176 DcIaik~g--------~ni~i~n~~c~~~~g~sigslG~~~~~~v~nV~v~n~~~~~t~-~G~rIKt~~~~~G~v~nV~f  246 (336)
T d1nhca_         176 DCIAINSG--------ESISFTGGTCSGGHGLSIGSVGGRDDNTVKNVTISDSTVSNSA-NGVRIKTIYKETGDVSEITY  246 (336)
T ss_dssp             EEEEESSE--------EEEEEESCEEESSSEEEEEEESSSSCCEEEEEEEEEEEEESCS-EEEEEEEETTCCCEEEEEEE
T ss_pred             CcEEeecc--------ceEEEEEeeecccccceeeeccccccccEEEEEEEeceeeCCC-ceeEEEEecCCCceEeeEEE
Confidence            77766643        2577777655332110 00111      124788888887753 34322    112   24566


Q ss_pred             EceEEecCC
Q 016742          285 QCNIYEAGQ  293 (383)
Q Consensus       285 e~Nyf~~g~  293 (383)
                      ++..++...
T Consensus       247 ~ni~~~~V~  255 (336)
T d1nhca_         247 SNIQLSGIT  255 (336)
T ss_dssp             EEEEEEEES
T ss_pred             EeEEEeccc
Confidence            666665543

>d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate transeliminase
domain: Pectate transeliminase
species: Erwinia chrysanthemi [TaxId: 556]

Probab=97.50  E-value=0.0019  Score=59.53  Aligned_cols=130  Identities=11%  Similarity=0.083  Sum_probs=73.3

Q ss_pred             CCCCCCCeEEecC-CCCCCCc-------hHHHhhhcCCCeEEEEEeceEEEecc------eeEec------cCcceeeec
Q 016742           79 IGGLHGPLYHVTT-LADDGPG-------SLREGCRMKEPLWIVFEVSGTIHLRS------HLSVS------SYKTIDGRG  138 (383)
Q Consensus        79 tGG~gG~v~~VTn-l~d~g~G-------SLr~ai~~~~Pr~IVf~vsG~I~l~~------~l~V~------snkTI~G~G  138 (383)
                      .|=.-+++|+|.. -+|++.|       +|++|++...|...|+--.|+.....      .+.+.      ..+||.+.+
T Consensus         9 ~~~~~~~~~YVs~~Gsd~~~Gs~~~p~~tIq~Ai~~a~~GDtI~v~~GtY~~~~~~~~~~~~~~~~~G~~~~~i~i~~~~   88 (400)
T d1ru4a_           9 SGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILLKPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAAN   88 (400)
T ss_dssp             TTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEECSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGG
T ss_pred             cccccCCeEEECCCCcCCCCCCccccHHHHHHHHHhCCCcCEEEEcCceeecceeecCceEEEEecCCCCCCeEEEecCC
Confidence            3334568999874 4455444       59999988777655554578876421      12221      234566654


Q ss_pred             cce-EEeCC-----------cEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCCce
Q 016742          139 QRV-KLTGK-----------GLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTD  206 (383)
Q Consensus       139 ~gi-~I~G~-----------gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~  206 (383)
                      .+. .|.+.           .+.+. .++++|+++.++...   ..++.+.  ..++.|++|.|.+..+..+.+......
T Consensus        89 ~~~~vi~~~~~~~~~~~~~~~~~i~-~~~~~i~~~~~~~~~---~~~~~~~--~~~~~i~n~~i~~~~~~g~~~~~~~~~  162 (400)
T d1ru4a_          89 CGRAVFDFSFPDSQWVQASYGFYVT-GDYWYFKGVEVTRAG---YQGAYVI--GSHNTFENTAFHHNRNTGLEINNGGSY  162 (400)
T ss_dssp             GCCEEEECCCCTTCCCTTCCSEEEC-SSCEEEESEEEESCS---SCSEEEC--SSSCEEESCEEESCSSCSEEECTTCCS
T ss_pred             CCeeEEeCCccccccccccceEEEe-cCcEEEecceeecCc---ceeeeec--ccccccccceEecCCcceEEEeccccc
Confidence            332 23221           24454 789999999998753   2344443  345667777777655555555433344


Q ss_pred             EEEeCcee
Q 016742          207 ITVSRCHF  214 (383)
Q Consensus       207 VTIS~n~f  214 (383)
                      ..+..|.+
T Consensus       163 ~~~~~~~~  170 (400)
T d1ru4a_         163 NTVINSDA  170 (400)
T ss_dssp             CEEESCEE
T ss_pred             cEEEEeeE
Confidence            44444443

>d1k5ca_ b.80.1.3 (A:) Polygalacturonase {Fungus (Stereum purpureum), endo-polygalacturonase I [TaxId: 58369]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Stereum purpureum), endo-polygalacturonase I [TaxId: 58369]

Probab=97.27  E-value=0.00088  Score=63.60  Aligned_cols=93  Identities=16%  Similarity=0.318  Sum_probs=66.5

Q ss_pred             EEEeeec-cEEEeeeEEecCC------CCCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecCCCce
Q 016742          148 LRLKECE-HVIICNLEFEGGK------GPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSSHDKT  220 (383)
Q Consensus       148 l~i~~a~-NVIIRnL~ir~g~------~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~H~k~  220 (383)
                      |.|..++ ||.|+||+|....      ....|||.+.  +++|+|.+|.+..+.| +|.++. +.+|+|++|.+.. ..+
T Consensus       120 ~~i~~~~~~v~i~nv~I~~~~i~~~~~~~NTDGidi~--s~nV~I~n~~i~~gDD-cIaik~-g~ni~i~n~~c~~-ghG  194 (333)
T d1k5ca_         120 ISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVS--ANNVTIQNCIVKNQDD-CIAIND-GNNIRFENNQCSG-GHG  194 (333)
T ss_dssp             EEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEE--CSSEEEESCEEESSSC-SEEEEE-EEEEEEESCEEES-SCC
T ss_pred             EEEecccCcEEEEeEEEEeeecCCCccCCCcceEeEe--cceEEEEecEEecCCC-EEEEcC-ccEEEEEEEEECC-CCc
Confidence            4444443 7888888887532      2346999994  7899999999987766 688864 5799999999974 236


Q ss_pred             eEecCCCCCCCCcceeEEEeceeecCC
Q 016742          221 MLIGADPSHVADRCIRVTIHHCFFDGT  247 (383)
Q Consensus       221 ~LiG~~d~~~~d~~~~VT~hhN~f~~~  247 (383)
                      +-||+....  +.-.+|++.++.|.++
T Consensus       195 isiGS~g~~--~~V~nV~v~n~~~~~t  219 (333)
T d1k5ca_         195 ISIGSIATG--KHVSNVVIKGNTVTRS  219 (333)
T ss_dssp             EEEEEECTT--CEEEEEEEESCEEEEE
T ss_pred             eeeecccCC--CcEEEEEEEEeEEeCC
Confidence            777864211  1124899999988765

>d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin lyase
domain: Pectin lyase
species: Aspergillus niger, type A [TaxId: 5061]

Probab=97.22  E-value=0.0022  Score=61.03  Aligned_cols=114  Identities=13%  Similarity=0.167  Sum_probs=79.2

Q ss_pred             CCceEecCCCceEEEEceeeecC-------CCCceEeecCCceEEEeCceecCCCceeE-ecCCCCCCCCcceeEEEece
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRDY-------DDGLIDITRESTDITVSRCHFSSHDKTML-IGADPSHVADRCIRVTIHHC  242 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~~-------~Dglidi~~~s~~VTIS~n~f~~H~k~~L-iG~~d~~~~d~~~~VT~hhN  242 (383)
                      +-++.|..+++||+|-|..|...       .|. |.+ .++++|-|-+|.|+.-.-..+ .+..      ..-+||+-+|
T Consensus       123 g~g~~i~~~~~NVIiRNl~i~~~~~~~~~~~Da-I~i-~~s~nVwIDH~s~s~~~d~~~~~~~~------~s~~vTis~~  194 (359)
T d1idka_         123 GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDA-ITL-DDCDLVWIDHVTTARIGRQHYVLGTS------ADNRVSLTNN  194 (359)
T ss_dssp             SCCEEECTTCEEEEEESCEEEEECTTEETSCCS-EEE-CSCEEEEEESCEEEEESSCSEEECCC------TTCEEEEESC
T ss_pred             cCceEEEecCceEEEECcEEecCCCCCCCCCCe-EEe-eCCccEEEEeeeeccCCCCceeeecc------CCCceeeece
Confidence            34666644689999999999753       355 777 478999999999974222222 2211      1137999999


Q ss_pred             eecCCCCcCCccc----------c--CeeEEEcceEEccccceeeecCCceEEEEceEEecC
Q 016742          243 FFDGTRQRHPRVR----------Y--AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAG  292 (383)
Q Consensus       243 ~f~~~~~R~Pr~r----------~--G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g  292 (383)
                      +|...........          .  ..+-+.+|+|.+.....-..+.+.++.+.||||.+.
T Consensus       195 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~vT~hhN~f~~~~~R~P~~r~g~~~hv~NN~~~n~  256 (359)
T d1idka_         195 YIDGVSDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQDNTLLHAVNNYWYDI  256 (359)
T ss_dssp             EEECBCSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEECTTCEEEEESCEEEEE
T ss_pred             eeeccccccccccccccCCceecCCCccEEEEeeEEccCCCCCceecccceEEEECcEEECc
Confidence            9977655543331          1  257899999998776666666677888899999864

>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus [TaxId: 984]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Chondroitinase B
domain: Chondroitinase B
species: Pedobacter heparinus [TaxId: 984]

Probab=97.20  E-value=0.0011  Score=64.25  Aligned_cols=43  Identities=21%  Similarity=0.105  Sum_probs=27.6

Q ss_pred             EeeeccEEEeeeEEecCCCCCC------CceEecCCCceEEEEceeeecC
Q 016742          150 LKECEHVIICNLEFEGGKGPDV------DAIQIKPKSKHIWIDRCSLRDY  193 (383)
Q Consensus       150 i~~a~NVIIRnL~ir~g~~~d~------DaI~i~~~s~nVwIDHcs~s~~  193 (383)
                      ...++++.|.+..|+.....+.      .++... .+++++|+||.|...
T Consensus        97 ~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~-~~~n~~I~~n~~~~~  145 (481)
T d1ofla_          97 AIYGSYNRITACVFDCFDEANSAYITTSLTEDGK-VPQHCRIDHCSFTDK  145 (481)
T ss_dssp             EECSSSCEEESCEEESCCSSCSCSEEECCCTTCC-CCCSCEEESCEEECC
T ss_pred             EeEeecceEeeeEeecccccccceeccceeEEEe-eccceEEECceEecC
Confidence            3346788888888886543222      222222 467889999999753

>d1pxza_ b.80.1.1 (A:) Major pollen allergen Jun a 1 {Ozark white cedar (Juniperus ashei) [TaxId: 13101]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Major pollen allergen Jun a 1
species: Ozark white cedar (Juniperus ashei) [TaxId: 13101]

Probab=96.97  E-value=0.0035  Score=59.45  Aligned_cols=114  Identities=12%  Similarity=0.023  Sum_probs=77.1

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEe------ecCCceEEEeCceecCCC
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDI------TRESTDITVSRCHFSSHD  218 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi------~~~s~~VTIS~n~f~~H~  218 (383)
                      +.+|.|.+++||+|.|..|..+.   +..|.+..++++|=|..|.|+.....++.-      ..+..+||+-+|+|.++.
T Consensus       150 gDai~i~~s~nvwIDH~s~s~~~---D~~idi~~~s~~vTis~~~f~~~~~~~~~G~~~~~~~~~~~~vT~hhN~~~~n~  226 (346)
T d1pxza_         150 GDAITMRNVTNAWIDHNSLSDCS---DGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNA  226 (346)
T ss_dssp             CCSEEEESCEEEEEESCEEECCS---SEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSE
T ss_pred             CceeeeecCceEEEECcEeeccc---cCceeEecCCEEEEEEeeEEccCccccccCCCcccccCCCceEEEEccccCCCc
Confidence            46789989999999999998642   234666556889999999887532222111      012346999999997542


Q ss_pred             c-ee-EecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEccc
Q 016742          219 K-TM-LIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNWG  270 (383)
Q Consensus       219 k-~~-LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~~  270 (383)
                      . .+ +...         -.+.+-+|+|.+.....=..+. +++.+.||||.+..
T Consensus       227 ~r~~p~~r~---------g~~hv~NN~~~n~~~~~~~~~~~~~v~~e~N~F~~~~  272 (346)
T d1pxza_         227 GQRMPRARY---------GLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPS  272 (346)
T ss_dssp             EECTTEEES---------SEEEEESCEECCCSSCSEEEESCCEEEEESCEEECCS
T ss_pred             ccCCCcccc---------ceEEEECcEeecCccEEEeccCceEEEEEeeEEECCC
Confidence            2 11 2111         1678889999987766544443 57899999998743

>d1o88a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type C [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type C [TaxId: 556]

Probab=96.97  E-value=0.0023  Score=60.84  Aligned_cols=140  Identities=12%  Similarity=0.054  Sum_probs=89.0

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCC---------CCCc-eEecCCCceEEEEceeeecCCCCceEee---cCCceEEEeC
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGP---------DVDA-IQIKPKSKHIWIDRCSLRDYDDGLIDIT---RESTDITVSR  211 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~---------d~Da-I~i~~~s~nVwIDHcs~s~~~Dglidi~---~~s~~VTIS~  211 (383)
                      +.+|.+.+++||+|.|.+|..+...         -.|+ +.|...+.+|=|-.|.|.....+.+.-.   ...++||+-+
T Consensus       130 ~D~i~~~~~~~vwIDH~s~s~~~d~~~~~~~~~~~~~~~~di~~~~~~vTis~n~~~~~~k~~l~g~~~~~~~~~vT~hh  209 (353)
T d1o88a_         130 GDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHH  209 (353)
T ss_dssp             CCSEEEESCCSEEEESCEEECCSCCCTTCGGGTCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSSSCCCCEEEEES
T ss_pred             CcEEEEecccEEEEEccEEeccccccccccCccccceeeEEeccCcccEEEECcccccccccceeCCccCcCCceEEEEe
Confidence            4678998999999999999865311         1233 3344456677666666665444433321   1245899999


Q ss_pred             ceecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcCCcccc-CeeEEEcceEEcccccee---eecCCceEEEEc
Q 016742          212 CHFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRHPRVRY-AKVHLYNNYTRNWGIYAV---CASVDSQIYSQC  286 (383)
Q Consensus       212 n~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~Pr~r~-G~~hv~NN~~~n~~~~a~---~~~~~a~i~~e~  286 (383)
                      |+|.++.. .-++..         -.+-+.+|+|.+.....-..+. +.+.+.||||.+...-..   .......+...+
T Consensus       210 N~~~~~~~R~P~~~~---------g~~h~~NN~~~n~~~~~~~~~~~~~~~~e~N~f~~~~~p~~~~~~~~~~g~~~~~~  280 (353)
T d1o88a_         210 NYYNDVNARLPLQRG---------GLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVLKG  280 (353)
T ss_dssp             CEEEEEEECSCEEES---------SEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEESSEEECSSSSSCCEEEEES
T ss_pred             eEEcCCccCCcceec---------ceEEEEEEEEecccceEEecCCCceEEEEeeEEecccCCccccccCCcceeEEECC
Confidence            99985432 123332         1567789999887766544443 578999999998643221   222345677788


Q ss_pred             eEEecCC
Q 016742          287 NIYEAGQ  293 (383)
Q Consensus       287 Nyf~~g~  293 (383)
                      |+|....
T Consensus       281 n~~~~~~  287 (353)
T d1o88a_         281 NNITKPA  287 (353)
T ss_dssp             CSCCSTT
T ss_pred             Ceeeccc
Confidence            8887654

>d1pcla_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type E [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type E [TaxId: 556]

Probab=96.85  E-value=0.029  Score=52.90  Aligned_cols=149  Identities=20%  Similarity=0.119  Sum_probs=83.1

Q ss_pred             CceEecCCCceEEEEceeeecCC----------------CCceEeecCCceEEEeCceecCCC-ceeEecCC---CCCCC
Q 016742          172 DAIQIKPKSKHIWIDRCSLRDYD----------------DGLIDITRESTDITVSRCHFSSHD-KTMLIGAD---PSHVA  231 (383)
Q Consensus       172 DaI~i~~~s~nVwIDHcs~s~~~----------------Dglidi~~~s~~VTIS~n~f~~H~-k~~LiG~~---d~~~~  231 (383)
                      -+|.|. +++||+|-|..|....                |. |.+ .++++|=|-+|-|+.-. ..+-+...   .....
T Consensus        96 ~gl~i~-~a~NVIirnl~ir~~~~~~~~~~~g~~~~~~~D~-i~~-~~~~~vwIDHcs~s~~~d~~~~~~~~~~~~~~~~  172 (355)
T d1pcla_          96 GSLVIK-GVKNVILRNLYIETPVDVAPHYESGDGWNAEWDA-AVI-DNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQH  172 (355)
T ss_pred             CEEEEE-ccccEEEEeeEeecCcccCCccccCCCcCccCce-EEe-cCCccEEEECcccccCcccccccccccccccccc
Confidence            456775 6899999999997532                33 444 35677777777776211 01101100   00001


Q ss_pred             Cc-------ceeEEEeceeecCCCCcCCc--------ccc--CeeEEEcceEEccccceeeecCCceEEEEceEEecCCc
Q 016742          232 DR-------CIRVTIHHCFFDGTRQRHPR--------VRY--AKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAGQK  294 (383)
Q Consensus       232 d~-------~~~VT~hhN~f~~~~~R~Pr--------~r~--G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g~~  294 (383)
                      |+       .-.||+-+|+|.++..-+.-        ...  ..+-+.+|||.+.....=..+ ..++.+.||||.+...
T Consensus       173 dg~~d~~~~s~~vTiS~~~~~~~~~~~l~G~~~~~~~~~~~~~~vT~hhNl~~~~~~R~P~~r-~G~~hv~NN~~~n~~~  251 (355)
T d1pcla_         173 DGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR-FGSIHAYNNVYLGDVK  251 (355)
T ss_pred             cceeeeccceeeEEEeeeecCCcccceeecCCCCCccccCCcceEEEecccccCCcccCCccc-ccEEEEECcEEECCCC
Confidence            11       23899999999775332211        111  146788999988765443333 2367889999987654


Q ss_pred             cceeeeeccccCCccccCcceEEecCCEEEcccc
Q 016742          295 KMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQ  328 (383)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~  328 (383)
                      .........    ......+.+..++|+|..+..
T Consensus       252 ~~~~~~~y~----~~~~~~~~v~~e~NyF~~~~~  281 (355)
T d1pcla_         252 HSVYPYLYS----FGLGTSGSILSESNSFTLSNL  281 (355)
T ss_pred             cccccceee----eccCcCceEEEeCCEEECCCC
Confidence            321110000    011234567788999988754

>d1qcxa_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type B [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin lyase
domain: Pectin lyase
species: Aspergillus niger, type B [TaxId: 5061]

Probab=96.74  E-value=0.016  Score=55.08  Aligned_cols=115  Identities=16%  Similarity=0.199  Sum_probs=75.9

Q ss_pred             CCceEecCCCceEEEEceeeecCC------CCceEeecCCceEEEeCceecCC-CceeEecCCCCCCCCcceeEEEecee
Q 016742          171 VDAIQIKPKSKHIWIDRCSLRDYD------DGLIDITRESTDITVSRCHFSSH-DKTMLIGADPSHVADRCIRVTIHHCF  243 (383)
Q Consensus       171 ~DaI~i~~~s~nVwIDHcs~s~~~------Dglidi~~~s~~VTIS~n~f~~H-~k~~LiG~~d~~~~d~~~~VT~hhN~  243 (383)
                      +-++.+..+++||+|-|..|....      +..|.+ .++++|=|-+|.|+.- +..++...      ...-.||+-.|+
T Consensus       123 g~g~~~~~~~~NVIirnl~ir~~~~~~~~~~Dai~i-~~s~nvwIDH~s~s~~~d~~~~~~~------~~s~~vTvs~~~  195 (359)
T d1qcxa_         123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITV-DDSDLVWIDHVTTARIGRQHIVLGT------SADNRVTISYSL  195 (359)
T ss_dssp             SCCEEEETTCCCEEEESCEEEEECTTEETSCCSEEE-ESCCCEEEESCEEEEESSCSEEECS------SCCEEEEEESCE
T ss_pred             ccceEEEeCCccEEEeCeEEecCCCCCCCCCCeEEe-eCCCCEEEEeeeccccCCCceEeec------cCCCceEeeccE
Confidence            345655336899999999998542      224666 4688898988888621 12222221      112379999999


Q ss_pred             ecCCCCcCCcc----------ccC--eeEEEcceEEccccceeeecCCceEEEEceEEecC
Q 016742          244 FDGTRQRHPRV----------RYA--KVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEAG  292 (383)
Q Consensus       244 f~~~~~R~Pr~----------r~G--~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~g  292 (383)
                      |........-.          ..+  .+.+.+|+|.+.....-..+.+..+.+.||||.+.
T Consensus       196 f~~~~~~~~~~~~~~~~~~~~~~~~~~vT~hhN~~~~~~~R~P~~r~g~~~hv~NN~~~n~  256 (359)
T d1qcxa_         196 IDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNF  256 (359)
T ss_dssp             EECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEECSSEEEEEESCEEEEE
T ss_pred             eccCccccccccccCCCCceecCCCceEEEEeeeccCCCCCCccccCCceEEEEeeEEeCc
Confidence            97765543322          112  47899999998776655555565688899999874

>d1gq8a_ b.80.1.5 (A:) Pectin methylesterase PemA {Carrot (Daucus carota) [TaxId: 4039]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Carrot (Daucus carota) [TaxId: 4039]

Probab=96.70  E-value=0.018  Score=53.95  Aligned_cols=109  Identities=16%  Similarity=0.266  Sum_probs=77.3

Q ss_pred             hHHHhhhc----CCCeEEEEEeceEEEecceeEec---cCcceeeeccceEE-eCC-------------cEEEeeeccEE
Q 016742           99 SLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQRVKL-TGK-------------GLRLKECEHVI  157 (383)
Q Consensus        99 SLr~ai~~----~~Pr~IVf~vsG~I~l~~~l~V~---snkTI~G~G~gi~I-~G~-------------gl~i~~a~NVI  157 (383)
                      |+++||++    ...+++|+-..|+.+  +.|.|.   +++||+|.|..-++ ...             .+.+. +++++
T Consensus        21 TIq~AIda~p~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~itl~G~g~~~tiIt~~~~~~~~~~t~~sat~~v~-~~~f~   97 (319)
T d1gq8a_          21 TVSEAVAAAPEDSKTRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAV-GAGFL   97 (319)
T ss_dssp             SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEEC-STTCE
T ss_pred             CHHHHHhhCccCCCCcEEEEEcCceEE--EEEEECCCCCeEEEEEcCCCCcEEEecccccCCCccccccceeee-cCCeE
Confidence            57788865    234566666789884  667773   68999999865443 321             24554 89999


Q ss_pred             EeeeEEecCCC---CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceec
Q 016742          158 ICNLEFEGGKG---PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFS  215 (383)
Q Consensus       158 IRnL~ir~g~~---~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~  215 (383)
                      ++||+|+...+   ...-|+.+.  +.++.+.+|.|.-..|-|++-   ...--+.+|.|.
T Consensus        98 a~nitf~Nt~g~~~~QAvAl~v~--gd~~~fy~c~f~G~QDTL~~~---~gr~yf~~c~Ie  153 (319)
T d1gq8a_          98 ARDITFQNTAGAAKHQAVALRVG--SDLSAFYRCDILAYQDSLYVH---SNRQFFINCFIA  153 (319)
T ss_dssp             EEEEEEEECCCGGGCCCCSEEEC--CTTEEEEEEEEECSTTCEEEC---SSEEEEESCEEE
T ss_pred             EEeeEEEeCCCCCCCcEEEEEec--CcceEEEcceecccCCeeEEC---CCCEEEEeeEEE
Confidence            99999997542   224567774  568999999999999998764   235667888876

>d1qjva_ b.80.1.5 (A:) Pectin methylesterase PemA {Erwinia chrysanthemi [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectin methylesterase
domain: Pectin methylesterase PemA
species: Erwinia chrysanthemi [TaxId: 556]

Probab=96.67  E-value=0.034  Score=52.34  Aligned_cols=121  Identities=12%  Similarity=0.240  Sum_probs=80.6

Q ss_pred             chHHHhhhcC---CCeEEEEEeceEEEecceeEec-cCcceeeeccceEE-eC-------------------CcEEEeee
Q 016742           98 GSLREGCRMK---EPLWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQRVKL-TG-------------------KGLRLKEC  153 (383)
Q Consensus        98 GSLr~ai~~~---~Pr~IVf~vsG~I~l~~~l~V~-snkTI~G~G~gi~I-~G-------------------~gl~i~~a  153 (383)
                      -++++||++-   +.+++||-..|+.  .+.|.|. +++||+|+|..-++ .+                   ..+.+ .+
T Consensus        19 ~TIq~AI~a~p~~~~~~vI~I~~G~Y--~E~V~I~k~~itl~G~~~~~tiI~~~~~~~~~~~~~~~~~t~~sat~~v-~a   95 (342)
T d1qjva_          19 KTIADAIASAPAGSTPFVILIKNGVY--NERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI-SA   95 (342)
T ss_dssp             SSHHHHHHTSCSSSSCEEEEECSEEE--CCCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE-CS
T ss_pred             hhHHHHHHhCccCCceEEEEEcCeEE--EEEEEEcCCCeEEEEcCCCCcEEEecccccccccCCCcccccceeeEEE-ee
Confidence            3588888652   2334555568988  4668886 78999999754333 22                   12455 48


Q ss_pred             ccEEEeeeEEecCCC-----------------CCCCceEecCCCceEEEEceeeecCCCCceEeecCCceEEEeCceecC
Q 016742          154 EHVIICNLEFEGGKG-----------------PDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRESTDITVSRCHFSS  216 (383)
Q Consensus       154 ~NVIIRnL~ir~g~~-----------------~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s~~VTIS~n~f~~  216 (383)
                      ++++++||+|+....                 ...-||.+...+..+-+-+|.|.-..|-|++-.   ..--+.+|.|..
T Consensus        96 ~~f~a~nitf~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~~~gD~~~fy~C~f~G~QDTL~~~~---gr~y~~~c~IeG  172 (342)
T d1qjva_          96 KDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSG---GRSFFSDCRISG  172 (342)
T ss_dssp             SSCEEEEEEEEECCCHHHHHTSCTTCTTCCSCCCCCSEEECTTCCSEEEEEEEEECSTTCEEECS---SEEEEESCEEEE
T ss_pred             CCeEEEeeEEecCCccccccccccccccccCCCceEEEEeecCCCceeEEeeeeccccceeEeCC---CCEEEEeeEEec
Confidence            999999999997421                 123566664346789999999999999887642   355667887753


Q ss_pred             CCceeEecC
Q 016742          217 HDKTMLIGA  225 (383)
Q Consensus       217 H~k~~LiG~  225 (383)
                      . -=+++|.
T Consensus       173 ~-vDFIfG~  180 (342)
T d1qjva_         173 T-VDFIFGD  180 (342)
T ss_dssp             S-EEEEEES
T ss_pred             c-CcEEecC
Confidence            2 3355664

>d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain {Penicillium minioluteum [TaxId: 28574]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Dextranase, catalytic domain
domain: Dextranase, catalytic domain
species: Penicillium minioluteum [TaxId: 28574]

Probab=96.48  E-value=0.007  Score=57.60  Aligned_cols=77  Identities=13%  Similarity=0.048  Sum_probs=56.7

Q ss_pred             cCcceeeeccceEEeCC---cEEEeeeccEEEeeeEEec--CCCCCCCceEecCCCceEEEEceeeecCCCCceEeecCC
Q 016742          130 SYKTIDGRGQRVKLTGK---GLRLKECEHVIICNLEFEG--GKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITRES  204 (383)
Q Consensus       130 snkTI~G~G~gi~I~G~---gl~i~~a~NVIIRnL~ir~--g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~~s  204 (383)
                      .|++|.|    ++|...   .+.+..++||.+++++++.  ......|||.+   +++|+|++|.+.-+.|. |.++  +
T Consensus       132 ~n~~i~g----iti~~s~~~~~~~~~~~~v~i~~~~i~~~~~~~~n~dgi~~---~~~~~i~~~~~~~gDD~-i~~~--s  201 (373)
T d1ogmx2         132 QTWYCVG----PTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEI---YPNSVVHDVFWHVNDDA-IKIY--Y  201 (373)
T ss_dssp             EEEEEES----CEEECCSSCCEEECSSSCEEEEEEEEEEECCCSTTCCCCBC---CTTCEEEEEEEEESSCS-EECC--S
T ss_pred             eEEEEeC----EEEECCCeeEEEEccCCeEEEEEEEEEecCCCCCCCeeeec---cCCEEEEeeEEecCCCE-EEec--C
Confidence            4555554    455543   4677789999999999974  33345788876   56899999999865555 7775  6


Q ss_pred             ceEEEeCceecC
Q 016742          205 TDITVSRCHFSS  216 (383)
Q Consensus       205 ~~VTIS~n~f~~  216 (383)
                      .+++|++|.|..
T Consensus       202 ~~i~v~n~~~~~  213 (373)
T d1ogmx2         202 SGASVSRATIWK  213 (373)
T ss_dssp             TTCEEEEEEEEE
T ss_pred             CCEEEEEEEEEC
Confidence            799999999974

>d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain {Penicillium minioluteum [TaxId: 28574]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Dextranase, catalytic domain
domain: Dextranase, catalytic domain
species: Penicillium minioluteum [TaxId: 28574]

Probab=96.32  E-value=0.015  Score=55.23  Aligned_cols=70  Identities=11%  Similarity=0.106  Sum_probs=53.2

Q ss_pred             EEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeec------CCCCceEeecCCceEEEeCceecCCCceeE
Q 016742          149 RLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRD------YDDGLIDITRESTDITVSRCHFSSHDKTML  222 (383)
Q Consensus       149 ~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~------~~Dglidi~~~s~~VTIS~n~f~~H~k~~L  222 (383)
                      ++..++|+.|++|+++....   =.+.+. .+++|-|+.+.+..      ..|| +|+   +.+++|++|.|..-+-++-
T Consensus       127 ~~~~~~n~~i~giti~~s~~---~~~~~~-~~~~v~i~~~~i~~~~~~~~n~dg-i~~---~~~~~i~~~~~~~gDD~i~  198 (373)
T d1ogmx2         127 NLGGGQTWYCVGPTINAPPF---NTMDFN-GNSGISSQISDYKQVGAFFFQTDG-PEI---YPNSVVHDVFWHVNDDAIK  198 (373)
T ss_dssp             CCCSSEEEEEESCEEECCSS---CCEEEC-SSSCEEEEEEEEEEECCCSTTCCC-CBC---CTTCEEEEEEEEESSCSEE
T ss_pred             EEEcceEEEEeCEEEECCCe---eEEEEc-cCCeEEEEEEEEEecCCCCCCCee-eec---cCCEEEEeeEEecCCCEEE
Confidence            44578999999999998643   346665 68888888888852      4687 566   5689999999987777776


Q ss_pred             ecCC
Q 016742          223 IGAD  226 (383)
Q Consensus       223 iG~~  226 (383)
                      +++.
T Consensus       199 ~~s~  202 (373)
T d1ogmx2         199 IYYS  202 (373)
T ss_dssp             CCST
T ss_pred             ecCC
Confidence            6654

>d1bn8a_ b.80.1.1 (A:) Pectate lyase {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Bacillus subtilis [TaxId: 1423]

Probab=96.32  E-value=0.052  Score=52.08  Aligned_cols=117  Identities=16%  Similarity=0.194  Sum_probs=74.7

Q ss_pred             CCcEEEeeeccEEEeeeEEecCCCC-------------CCC-ceEecCCCceEEEEceeeecCCCCceEeec-------C
Q 016742          145 GKGLRLKECEHVIICNLEFEGGKGP-------------DVD-AIQIKPKSKHIWIDRCSLRDYDDGLIDITR-------E  203 (383)
Q Consensus       145 G~gl~i~~a~NVIIRnL~ir~g~~~-------------d~D-aI~i~~~s~nVwIDHcs~s~~~Dglidi~~-------~  203 (383)
                      +..|.|.+++||+|.|..|..+...             ..| .|.|..++.+|=|-+|-|......+|.-..       +
T Consensus       183 ~DaI~i~~s~~VWIDH~t~s~~~~e~~~~~~~~~~~~~~~Dg~lDi~~gs~~VTvS~n~f~~h~k~~L~G~~d~~~~d~g  262 (399)
T d1bn8a_         183 YDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDG  262 (399)
T ss_dssp             CCSEEEESCEEEEEESCEEECTTCCGGGCCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEECCCTTCGGGTT
T ss_pred             CceEEEecCccEEEECceeccCCcccccccccccccccccccceeecccceeEEeECccccCCcceeEecCCCCcccccC
Confidence            5668888899999999999865311             123 446665778888888888764433332211       1


Q ss_pred             CceEEEeCceecCCCc-eeEecCCCCCCCCcceeEEEeceeecCCCCcC--Cc-----cc-cCeeEEEcceEEccc
Q 016742          204 STDITVSRCHFSSHDK-TMLIGADPSHVADRCIRVTIHHCFFDGTRQRH--PR-----VR-YAKVHLYNNYTRNWG  270 (383)
Q Consensus       204 s~~VTIS~n~f~~H~k-~~LiG~~d~~~~d~~~~VT~hhN~f~~~~~R~--Pr-----~r-~G~~hv~NN~~~n~~  270 (383)
                      ...||+-+|+|.+..- .=++..         -++-+-+|+|.+.....  |.     .+ .+++.+.||||.+..
T Consensus       263 ~~~vT~hhN~f~~~~~R~Prvr~---------g~vHv~NNy~~n~~~~~~~~~~ya~~~~~~a~il~EgN~F~~~~  329 (399)
T d1bn8a_         263 KLKITLHHNRYKNIVQRAPRVRF---------GQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPG  329 (399)
T ss_dssp             CCCEEEESCEEEEEEECSSEESS---------CEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEEESCEEECTT
T ss_pred             CceEEEEeeEecCccccCccccc---------cEEEEEccEeECCCcccccccceeeccccCceEEEEeeEEECCC
Confidence            2379999999974321 112221         14667799998765421  11     12 256889999998753

>d1bhea_ b.80.1.3 (A:) Polygalacturonase {Erwinia carotovora, subsp. carotovora [TaxId: 554]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Erwinia carotovora, subsp. carotovora [TaxId: 554]

Probab=96.09  E-value=0.038  Score=52.32  Aligned_cols=129  Identities=12%  Similarity=0.087  Sum_probs=80.2

Q ss_pred             eeeEEecCC--CCCCCceEecCCCceEEEEceeeec-----CCCCceEeecCCceEEEeCceecCCCceeEecCCCCCCC
Q 016742          159 CNLEFEGGK--GPDVDAIQIKPKSKHIWIDRCSLRD-----YDDGLIDITRESTDITVSRCHFSSHDKTMLIGADPSHVA  231 (383)
Q Consensus       159 RnL~ir~g~--~~d~DaI~i~~~s~nVwIDHcs~s~-----~~Dglidi~~~s~~VTIS~n~f~~H~k~~LiG~~d~~~~  231 (383)
                      +|++|++..  ......|.+. .+++|.|+++++..     ..|| ||+ ..+.+|+|++|.|...+-++.+.....  .
T Consensus       160 ~nv~i~~iti~ns~~~~~~~~-~~~~v~i~n~~I~~~~~~~NtDG-idi-~~s~nv~I~n~~i~~gDD~i~~ks~~~--~  234 (376)
T d1bhea_         160 KNFTLYNVSLINSPNFHVVFS-DGDGFTAWKTTIKTPSTARNTDG-IDP-MSSKNITIAYSNIATGDDNVAIKAYKG--R  234 (376)
T ss_dssp             EEEEEEEEEEECCSSCSEEEE-SCEEEEEEEEEEECCTTCSSCCS-EEE-ESCEEEEEESCEEECSSCSEEEEECTT--S
T ss_pred             ccEEEEeeEEecCCceEEEEe-CCceEEEEeEeccCCccCCCcce-eec-cccceEEEEeceeecCCCceeeecccC--C
Confidence            455555432  3446677776 68999999999864     3688 788 578999999999988777665543211  1


Q ss_pred             CcceeEEEeceeecCCCCcCCccc---cC--eeEEEcceEEccccceeee--cC--C---ceEEEEceEEecCCcc
Q 016742          232 DRCIRVTIHHCFFDGTRQRHPRVR---YA--KVHLYNNYTRNWGIYAVCA--SV--D---SQIYSQCNIYEAGQKK  295 (383)
Q Consensus       232 d~~~~VT~hhN~f~~~~~R~Pr~r---~G--~~hv~NN~~~n~~~~a~~~--~~--~---a~i~~e~Nyf~~g~~~  295 (383)
                      ....+|++.+|.|....  .-.+.   .+  .+.+.|+.+++.. .++..  ..  +   ..|.+|+..++....+
T Consensus       235 ~~~~ni~i~n~~~~~~~--g~~iGs~~~~v~nv~i~n~~~~~~~-~g~~Iks~~~~gG~v~nI~f~ni~~~~v~~p  307 (376)
T d1bhea_         235 AETRNISILHNDFGTGH--GMSIGSETMGVYNVTVDDLKMNGTT-NGLRIKSDKSAAGVVNGVRYSNVVMKNVAKP  307 (376)
T ss_dssp             CCEEEEEEEEEEECSSS--CEEEEEEESSEEEEEEEEEEEESCS-EEEEEECCTTTCCEEEEEEEEEEEEESCSEE
T ss_pred             CCcceEEEEeeEEecCC--CceeccccCCEEEEEEEeeeEcCCC-ceEEEEecCCCccEEEEEEEEeEEEeccCcc
Confidence            12348999999886532  12221   11  3678888887753 34432  11  1   1356666666665444

>d1pe9a_ b.80.1.1 (A:) Pectate lyase {Erwinia chrysanthemi, type A [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate lyase-like
domain: Pectate lyase
species: Erwinia chrysanthemi, type A [TaxId: 556]

Probab=95.84  E-value=0.079  Score=50.06  Aligned_cols=150  Identities=17%  Similarity=0.216  Sum_probs=84.6

Q ss_pred             CceEec--CCCceEEEEceeeecCC----------------CCceEeecCCceEEEeCceecCCC-ceeEecC-------
Q 016742          172 DAIQIK--PKSKHIWIDRCSLRDYD----------------DGLIDITRESTDITVSRCHFSSHD-KTMLIGA-------  225 (383)
Q Consensus       172 DaI~i~--~~s~nVwIDHcs~s~~~----------------Dglidi~~~s~~VTIS~n~f~~H~-k~~LiG~-------  225 (383)
                      .++.|.  .+++||+|-|..|+...                |. |.+..++++|=|-+|.|+.-. ..+.++.       
T Consensus       103 ~gl~i~~~~~~~NVIiRnl~ir~~~~~~~~~~~~~~~~~~~Da-i~i~~~s~~VwIDH~s~s~~~~~~~~~~~~~~~~~~  181 (361)
T d1pe9a_         103 GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDA-MNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYV  181 (361)
T ss_dssp             SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCS-EEEETTCEEEEEESCEEECTTSCGGGCCEETTEECC
T ss_pred             eeEEEeeccccceEEEEeEEeecCccCCCccccCCCcccCCCe-eEEecCCceEEEEccEeccCCccccccccccCccee
Confidence            445552  25789999999998532                44 566556788888888886311 1111111       


Q ss_pred             -CCCC--CCCcceeEEEeceeecCCCCcCCccc-----------cCeeEEEcceEEccccceeeecCCceEEEEceEEec
Q 016742          226 -DPSH--VADRCIRVTIHHCFFDGTRQRHPRVR-----------YAKVHLYNNYTRNWGIYAVCASVDSQIYSQCNIYEA  291 (383)
Q Consensus       226 -~d~~--~~d~~~~VT~hhN~f~~~~~R~Pr~r-----------~G~~hv~NN~~~n~~~~a~~~~~~a~i~~e~Nyf~~  291 (383)
                       .|..  .....-.||+-+|+|.++..- =.+.           ...+-+.+|+|.+.....=..+. .++.+.||||.+
T Consensus       182 ~~Dg~~di~~~s~~vTiS~~~f~~h~~~-~l~G~~d~~~~~d~g~~~vT~hhN~~~~~~~R~P~~r~-G~~Hv~NNy~~n  259 (361)
T d1pe9a_         182 QHDGALDIKRGSDYVTISNSLIDQHDKT-MLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVRY-GSIHSFNNVFKG  259 (361)
T ss_dssp             CCCCSEEECTTCEEEEEESCEEEEEEEC-EEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEESS-CEEEEESCEEEE
T ss_pred             eeeeeEEeecCccceEecCCcccCCCcc-eEeccCCCCccccCCcceEEEECccccCCcCcCCCeeC-ceEEEECceeec
Confidence             0100  001124899999998653211 1121           12589999999876544323332 467788999987


Q ss_pred             CCccceeeeeccccCCccccCcceEEecCCEEEcccc
Q 016742          292 GQKKMAFKYLTEKASDKEEARSGCIRSEGDLFITGTQ  328 (383)
Q Consensus       292 g~~~~~~~~~~~~~~~~~~~~~g~~~~~gn~~~nG~~  328 (383)
                      ........+..    .........+..++|+|..+..
T Consensus       260 ~~~~~~~~~~y----~~~~~~~a~il~E~NyF~~~~~  292 (361)
T d1pe9a_         260 DAKDPVYRYQY----SFGIGTSGSVLSEGNSFTIANL  292 (361)
T ss_dssp             ETTCSSSCCCC----SEEECTTCEEEEESCEEEEETC
T ss_pred             CcCccccccce----eeecCCCCEEEEEceEEECCCC
Confidence            54322111110    0011234567788999987654

>d1czfa_ b.80.1.3 (A:) Polygalacturonase {Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId: 5061]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Aspergillus niger), endo-polygalacturonase II [TaxId: 5061]

Probab=95.83  E-value=0.024  Score=53.12  Aligned_cols=73  Identities=14%  Similarity=0.227  Sum_probs=55.1

Q ss_pred             CcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCc--eEeecC----CceEEEeCceecCCCc
Q 016742          146 KGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGL--IDITRE----STDITVSRCHFSSHDK  219 (383)
Q Consensus       146 ~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dgl--idi~~~----s~~VTIS~n~f~~H~k  219 (383)
                      .||.+..++||.|+|-.|+.+    +|+|.+. .+++|+|..|.+... .|.  ..+...    -.+|++++|.|.+-..
T Consensus       153 DGidi~~s~nV~I~n~~i~tg----DDcIaik-s~~ni~i~n~~c~~~-hG~sigslG~~~~~~v~nV~v~n~~i~~t~~  226 (335)
T d1czfa_         153 DAFDVGNSVGVNIIKPWVHNQ----DDCLAVN-SGENIWFTGGTCIGG-HGLSIGSVGDRSNNVVKNVTIEHSTVSNSEN  226 (335)
T ss_dssp             CSEEECSCEEEEEESCEEECS----SCSEEES-SEEEEEEESCEEESS-CCEEEEEECSSSCCEEEEEEEEEEEEEEEEE
T ss_pred             CceEecCCCeEEEEeeEEecC----CceEEec-CceEEEEEEEEEECC-CCccccccCCCCcCCEeEEEEEeeEEECCCc
Confidence            679998889999999999965    6999997 679999999988643 232  122111    3699999999987766


Q ss_pred             eeEec
Q 016742          220 TMLIG  224 (383)
Q Consensus       220 ~~LiG  224 (383)
                      ++.|-
T Consensus       227 g~rIK  231 (335)
T d1czfa_         227 AVRIK  231 (335)
T ss_dssp             EEEEE
T ss_pred             cceEe
Confidence            66553

>d1k5ca_ b.80.1.3 (A:) Polygalacturonase {Fungus (Stereum purpureum), endo-polygalacturonase I [TaxId: 58369]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Galacturonase
domain: Polygalacturonase
species: Fungus (Stereum purpureum), endo-polygalacturonase I [TaxId: 58369]

Probab=95.72  E-value=0.02  Score=53.85  Aligned_cols=70  Identities=17%  Similarity=0.234  Sum_probs=57.1

Q ss_pred             CcEEEeeeccEEEeeeEEecCCCCCCCceEecCCCceEEEEceeeecCCCCceEeec---C--CceEEEeCceecCCCce
Q 016742          146 KGLRLKECEHVIICNLEFEGGKGPDVDAIQIKPKSKHIWIDRCSLRDYDDGLIDITR---E--STDITVSRCHFSSHDKT  220 (383)
Q Consensus       146 ~gl~i~~a~NVIIRnL~ir~g~~~d~DaI~i~~~s~nVwIDHcs~s~~~Dglidi~~---~--s~~VTIS~n~f~~H~k~  220 (383)
                      .||-+. ++||.|+|-.|+.+    +|+|.|. .++||+|+.|.+..+. | |.+..   +  ..+|+|++|.|.+...+
T Consensus       151 DGidi~-s~nV~I~n~~i~~g----DDcIaik-~g~ni~i~n~~c~~gh-G-isiGS~g~~~~V~nV~v~n~~~~~t~~G  222 (333)
T d1k5ca_         151 DGFDVS-ANNVTIQNCIVKNQ----DDCIAIN-DGNNIRFENNQCSGGH-G-ISIGSIATGKHVSNVVIKGNTVTRSMYG  222 (333)
T ss_dssp             CSEEEE-CSSEEEESCEEESS----SCSEEEE-EEEEEEEESCEEESSC-C-EEEEEECTTCEEEEEEEESCEEEEEEEE
T ss_pred             ceEeEe-cceEEEEecEEecC----CCEEEEc-CccEEEEEEEEECCCC-c-eeeecccCCCcEEEEEEEEeEEeCCcEE
Confidence            689995 89999999999975    5999997 6799999999998775 5 55531   2  36999999999987776


Q ss_pred             eEe
Q 016742          221 MLI  223 (383)
Q Consensus       221 ~Li  223 (383)
                      .-|
T Consensus       223 ~rI  225 (333)
T d1k5ca_         223 VRI  225 (333)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            655

>d1ru4a_ b.80.1.9 (A:) Pectate transeliminase {Erwinia chrysanthemi [TaxId: 556]}

class: All beta proteins
fold: Single-stranded right-handed beta-helix
superfamily: Pectin lyase-like
family: Pectate transeliminase
domain: Pectate transeliminase
species: Erwinia chrysanthemi [TaxId: 556]

Probab=93.06  E-value=0.92  Score=40.60  Aligned_cols=15  Identities=20%  Similarity=0.127  Sum_probs=11.5

Q ss_pred             eeccEEEeeeEEecC
Q 016742          152 ECEHVIICNLEFEGG  166 (383)
Q Consensus       152 ~a~NVIIRnL~ir~g  166 (383)
                      ..++++|++..|+..
T Consensus       135 ~~~~~~i~n~~i~~~  149 (400)
T d1ru4a_         135 IGSHNTFENTAFHHN  149 (400)
T ss_dssp             CSSSCEEESCEEESC
T ss_pred             cccccccccceEecC
Confidence            367888888888864