Citrus Sinensis ID: 016783

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---

MRGIAWISLLPLIIVTSLIIYDEWVSTPSCKIMPSADPNDYEPGPNSGSGVDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNFAWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEYIFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSVSYCSLARESQLLIAYGFVLISLSSIMLVANITQLRRSR

ccccHHHHHHHHHHHHHEEEEcEEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHccccEEEEccccccccccccHHcHHHHHHHHHHHHcccccccEEEEcccccccccccccccHHHHHHccccccccccccEEEEccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHHHHccccccccEEEEcccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHccccEEEEcccccccccccccccEEEEEccEEccccccccEEEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc

cccHHHHHHHHHHHHHHHHHHHHHEEHHccccccccccccccccccccccccEEEEEEEccHHccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHHHHHccccccccEEEEEccEEEEEEEEEEEccccccccccHHHHHHHHHHcccccccccccccccHHHHHccccccccccccEEEEEcccccccccccccccccccccccccccccccEEccccHHHHHHHHHHcccEEEEEccccccEEEEccccccEEEEccEEcccccccEEEEEEEccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccc

MRGIAWISLLPLIIVTSLIIydewvstpsckimpsadpndyepgpnsgsgvdLKVMMVANLLLvgsdsgfvdrhfRDYYMAKFFRksfhtlnpdMLLVLGDvsakgseltrsdwlpvLDRFHQMLGTflgvpfhvllgdrdvgecsgldtgsvdwiagnfpgldssgcgafeisnISFLSLNAVALLCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNFAWREkamssksgpvlllhfplhrtmesqcgsqisntrekrrfsepgpygllhavplnATEYIFQALKpkiifsahahefcdythsdgtreVTVSAMTwkarddpgfvianfhgngrgVSVSYCSLARESQLLIAYGFVLISLSSIMLVANITQLRRSR

mrgiawisLLPLIIVTSLIIYDEWVSTPSCKIMPSADPNDYEPGPNSGSGVDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNFAWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEYIFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSVSYCSLARESQLLIAYGFVLISLSSIMLVANitqlrrsr

***IAWISLLPLIIVTSLIIYDEWVSTPSCKI******************VDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESIDLRMEA***AEAVHDFSNFAWRE********PVLLLHFPLHR***********************PYGLLHAVPLNATEYIFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSVSYCSLARESQLLIAYGFVLISLSSIMLVANITQ*****

**GIAWISLLPLIIVTSLIIYDEWVSTPSCKIMPSADPNDYEPGPNSGSGVDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNFAWR****SSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEYIFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSVSYCSLARESQLLIAYGFVLISLSSIMLVANITQLRRS*

*RGIAWISLLPLIIVTSLIIYDEWVSTPSCKIMPSADPNDYEPGPNSGSGVDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESIDLR**********HDFSNFAWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEYIFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSVSYCSLARESQLLIAYGFVLISLSSIMLVANITQLR***

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiii

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iiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiii

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SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiii

SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		383	2.2.26 [Sep-21-2011]
Q53F39		396	Metallophosphoesterase 1	yes	no	0.783	0.757	0.256	2e-24
Q0IHA5		405	Metallophosphoesterase 1	N/A	no	0.812	0.767	0.253	2e-24
Q566Y9		381	Metallophosphoesterase 1	yes	no	0.796	0.800	0.248	2e-24
Q5RET5		397	Metallophosphoesterase 1	yes	no	0.822	0.793	0.258	5e-24
B1WC86		394	Metallophosphoesterase 1	yes	no	0.793	0.771	0.244	6e-24
C7G3A0		391	Metallophosphoesterase 1	yes	no	0.801	0.785	0.233	7e-24
Q80XL7		396	Metallophosphoesterase 1	yes	no	0.783	0.757	0.253	2e-23
Q9GMS6		396	Metallophosphoesterase 1	N/A	no	0.804	0.777	0.251	4e-23
D2I2M6		392	Metallophosphoesterase 1	yes	no	0.832	0.813	0.234	7e-22
Q5ZK82		398	Metallophosphoesterase 1	yes	no	0.804	0.773	0.239	1e-21

>sp\|Q53F39\|MPPE1_HUMAN Metallophosphoesterase 1 OS=Homo sapiens GN=MPPE1 PE=1 SV=2	Back alignment and function desciption

 Score =  114 bits (284), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 160/335 (47%), Gaps = 35/335 (10%)

Query: 53  LKVMMVANLLLVGSDSG-FVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTR 111
           LK M +A+  L+G   G ++D+  R++ M + F+ +   L P+++ +LGD+  +G   T 
Sbjct: 70  LKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDIFDEGKWSTP 129

Query: 112 SDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAF 171
             W   ++RF +M      V   V+ G+ D+G    ++T  V+     F     S    F
Sbjct: 130 EAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNTYKVERFEKVF-----SSERLF 184

Query: 172 EISNISFLSLNAVAL------LCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNF 225
               I+F+ +N+VAL      +C   +     E +  +  ++   EA+GS+         
Sbjct: 185 SWKGINFVMVNSVALNGDGCGICSETE----AELIEVSHRLNCSREARGSSRC------- 233

Query: 226 AWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATE 285
                 +   S PVLL H+PL+R  ++ C  + +   E+R       Y +L      A++
Sbjct: 234 --GPGPLLPTSAPVLLQHYPLYRRSDANCSGEDAAPAEERDIPFKENYDVLSR---EASQ 288

Query: 286 YIFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSV 345
            +   L+P+++ S H H  C+  H     E++V + +W+ R++P F++ +        ++
Sbjct: 289 KLLWWLQPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRNNPSFIMGSI--TPTDYTL 346

Query: 346 SYCSLARESQLLIAY----GF-VLISLSSIMLVAN 375
           S C L RE  +LI Y    GF V+++L+   L+A+
Sbjct: 347 SKCYLPREDVVLIIYCGVVGFLVVLTLTHFGLLAS 381

Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: -EC: .EC: -

>sp\|Q0IHA5\|MPPE1_XENLA Metallophosphoesterase 1 OS=Xenopus laevis GN=mppe1 PE=2 SV=1	Back alignment and function description

>sp\|Q566Y9\|MPPE1_DANRE Metallophosphoesterase 1 OS=Danio rerio GN=mppe1 PE=2 SV=1	Back alignment and function description

>sp\|Q5RET5\|MPPE1_PONAB Metallophosphoesterase 1 OS=Pongo abelii GN=MPPE1 PE=2 SV=1	Back alignment and function description

>sp\|B1WC86\|MPPE1_RAT Metallophosphoesterase 1 OS=Rattus norvegicus GN=Mppe1 PE=2 SV=1	Back alignment and function description

>sp\|C7G3A0\|MPPE1_CRIGR Metallophosphoesterase 1 OS=Cricetulus griseus GN=MPPE1 PE=1 SV=1	Back alignment and function description

>sp\|Q80XL7\|MPPE1_MOUSE Metallophosphoesterase 1 OS=Mus musculus GN=Mppe1 PE=2 SV=1	Back alignment and function description

>sp\|Q9GMS6\|MPPE1_MACFA Metallophosphoesterase 1 OS=Macaca fascicularis GN=MPPE1 PE=2 SV=1	Back alignment and function description

>sp\|D2I2M6\|MPPE1_AILME Metallophosphoesterase 1 OS=Ailuropoda melanoleuca GN=MPPE1 PE=3 SV=1	Back alignment and function description

>sp\|Q5ZK82\|MPPE1_CHICK Metallophosphoesterase 1 OS=Gallus gallus GN=MPPE1 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		383
255590046		374	conserved hypothetical protein [Ricinus	0.840	0.860	0.633	1e-122
224063205		371	predicted protein [Populus trichocarpa]	0.840	0.867	0.577	1e-105
359492437		341	PREDICTED: metallophosphoesterase 1 [Vit	0.814	0.914	0.565	1e-105
302141934		292	unnamed protein product [Vitis vinifera]	0.697	0.914	0.604	2e-95
357513939		650	Metallophosphoesterase [Medicago truncat	0.845	0.498	0.475	1e-92
357118310		412	PREDICTED: LOW QUALITY PROTEIN: metallop	0.866	0.805	0.486	7e-86
326515260		411	predicted protein [Hordeum vulgare subsp	0.872	0.812	0.475	1e-85
147779902		276	hypothetical protein VITISV_009618 [Viti	0.652	0.905	0.587	2e-83
326526751		392	predicted protein [Hordeum vulgare subsp	0.801	0.783	0.485	4e-83
218197821		404	hypothetical protein OsI_22204 [Oryza sa	0.892	0.846	0.465	6e-83

>gi\|255590046\|ref\|XP_002535160.1\| conserved hypothetical protein [Ricinus communis] gi\|223523881\|gb\|EEF27224.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/344 (63%), Positives = 262/344 (76%), Gaps = 22/344 (6%)

Query: 20  IYDEWVSTPSCKIMP-SADPNDYEPGPNSGSGVDLKVMMVANLLLVGSDSGFVDRHFRDY 78
           +Y+EWVS PSC ++P S+  ND     N G   DLKVMMVANLLL+GS + F D++FRDY
Sbjct: 22  VYEEWVSVPSCTVVPASSQQNDVVAVKNPGE--DLKVMMVANLLLLGSKASFFDQYFRDY 79

Query: 79  YMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFLGVPFHVLLG 138
           YM+KFFRKSFH+L PDMLLVLGD+SAKG ELT++ W+ +L +FH +LG FL +PFHV+LG
Sbjct: 80  YMSKFFRKSFHSLKPDMLLVLGDLSAKGFELTKTKWVSILHQFHGILGPFLELPFHVVLG 139

Query: 139 DRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVE 198
           DRD+GECS LD+ SV WI+ +FPGLDSSGCG FEISN+SF+SLN+VALLCGNNKLRFSVE
Sbjct: 140 DRDIGECSKLDSRSVHWISRSFPGLDSSGCGGFEISNVSFVSLNSVALLCGNNKLRFSVE 199

Query: 199 KVIETESIDLRMEAKGSAEAVHDFSN-------FAWREKAMSSKSGPVLLLHFPLHRTME 251
           + IETES+DLRME +G+++ + D  N       F WRE  MSS SGPVLL+HFPLHR   
Sbjct: 200 RTIETESLDLRMEMEGASKVMDDCGNLRELPDSFRWRENTMSSGSGPVLLVHFPLHRIAN 259

Query: 252 SQCGS------------QISNTREKRRFSEPGPYGLLHAVPLNATEYIFQALKPKIIFSA 299
             C                SN  E R F+  GPY LLH VP N+T+YIFQAL+P+IIFSA
Sbjct: 260 DSCMGGNGFEKATSSFLHASNALEHRGFAGSGPYDLLHTVPPNSTDYIFQALRPRIIFSA 319

Query: 300 HAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGV 343
           H++EFCD+THSDGTREVTV AMTWKARDDPGFVIA FHG  R +
Sbjct: 320 HSYEFCDHTHSDGTREVTVPAMTWKARDDPGFVIATFHGEERAL 363

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224063205\|ref\|XP_002301040.1\| predicted protein [Populus trichocarpa] gi\|222842766\|gb\|EEE80313.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359492437\|ref\|XP_002284209.2\| PREDICTED: metallophosphoesterase 1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302141934\|emb\|CBI19137.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|357513939\|ref\|XP_003627258.1\| Metallophosphoesterase [Medicago truncatula] gi\|355521280\|gb\|AET01734.1\| Metallophosphoesterase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357118310\|ref\|XP_003560898.1\| PREDICTED: LOW QUALITY PROTEIN: metallophosphoesterase 1-like [Brachypodium distachyon]	Back alignment and taxonomy information

>gi\|326515260\|dbj\|BAK03543.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

>gi\|147779902\|emb\|CAN65840.1\| hypothetical protein VITISV_009618 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|326526751\|dbj\|BAK00764.1\| predicted protein [Hordeum vulgare subsp. vulgare]	Back alignment and taxonomy information

>gi\|218197821\|gb\|EEC80248.1\| hypothetical protein OsI_22204 [Oryza sativa Indica Group]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		383
UNIPROTKB\|C7G3A0		391	MPPE1 "Metallophosphoesterase	0.814	0.797	0.250	4.6e-25
RGD\|1309184		394	Mppe1 "metallophosphoesterase	0.817	0.794	0.259	1.2e-24
UNIPROTKB\|Q5RET5		397	MPPE1 "Metallophosphoesterase	0.801	0.773	0.264	2.4e-24
ZFIN\|ZDB-GENE-050417-195		381	mppe1 "metallophosphoesterase	0.822	0.826	0.247	2.6e-24
MGI\|MGI:2661311		396	Mppe1 "metallophosphoesterase	0.798	0.772	0.251	4.1e-24
UNIPROTKB\|Q0IHA5		405	mppe1 "Metallophosphoesterase	0.809	0.765	0.261	6.3e-24
UNIPROTKB\|Q9GMS6		396	MPPE1 "Metallophosphoesterase	0.903	0.873	0.255	1.4e-23
UNIPROTKB\|F6XU00		371	MPPE1 "Uncharacterized protein	0.796	0.822	0.253	2.4e-21
UNIPROTKB\|E2QZ96		392	MPPE1 "Uncharacterized protein	0.809	0.790	0.256	2.7e-21
UNIPROTKB\|Q5ZK82		398	MPPE1 "Metallophosphoesterase	0.895	0.861	0.243	6.2e-21

UNIPROTKB\|C7G3A0 MPPE1 "Metallophosphoesterase 1" [Cricetulus griseus (taxid:10029)]	Back alignment and assigned GO terms

 Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
 Identities = 83/331 (25%), Positives = 161/331 (48%)

Query:    53 LKVMMVANLLLVGSDSG-FVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTR 111
             LK M +A+  L+G   G ++D+  R++ M + F+ +   L P+++ +LGD+  +G   T 
Sbjct:    65 LKAMFLADTHLLGEIRGHWLDKLRREWQMERAFQTALWWLQPEVIFILGDIFDEGKWSTT 124

Query:   112 SDWLPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAF 171
               W   + RF ++      V   V++G+ D+G    +    +      F  + SS    F
Sbjct:   125 EAWADDVQRFRKIFRHGSHVQLKVVIGNHDIGFHYQMSKYRIK----RFEKVFSSE-RLF 179

Query:   172 EISNISFLSLNAVALLCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNFAWREKA 231
                 ++F+ +N+VA+  G+     S+    E E  ++  +   S E V   S     ++ 
Sbjct:   180 SWKGVNFVMVNSVAME-GDG---CSICSEAEAELREISRKLNCSRE-VQGSSQCEGEQRL 234

Query:   232 MSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEYIFQAL 291
               S   PVLL H+PL+R  ++ C  + +   E+R       Y +L      A++ +   L
Sbjct:   235 PFS--APVLLQHYPLYRASDANCSGEDAAPPEERNVPFEEKYDVLSR---EASQKLLWWL 289

Query:   292 KPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNGRGVSVSYCSLA 351
             +P+++ S H H  C+  H  G  EV+V + +W+ R++P F++ +     +  ++S C L 
Sbjct:   290 QPRLVLSGHTHSACEVLHPGGVPEVSVPSFSWRNRNNPSFIMGSL--TSKDYALSKCYLP 347

Query:   352 RESQLLIAYGFVLISLSSIMLVANITQLRRS 382
              E ++L  YG   + L  ++++A++ +L  S
Sbjct:   348 FEDRVLATYGAAAVFLV-VLILAHLERLPSS 377

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0006506 "GPI anchor biosynthetic process" evidence=IMP

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IMP

GO:0008081 "phosphoric diester hydrolase activity" evidence=IDA

GO:0030145 "manganese ion binding" evidence=IDA

GO:0034235 "GPI anchor binding" evidence=IDA

GO:0070971 "endoplasmic reticulum exit site" evidence=IDA

RGD\|1309184 Mppe1 "metallophosphoesterase 1" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5RET5 MPPE1 "Metallophosphoesterase 1" [Pongo abelii (taxid:9601)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-050417-195 mppe1 "metallophosphoesterase 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

MGI\|MGI:2661311 Mppe1 "metallophosphoesterase 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0IHA5 mppe1 "Metallophosphoesterase 1" [Xenopus laevis (taxid:8355)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9GMS6 MPPE1 "Metallophosphoesterase 1" [Macaca fascicularis (taxid:9541)]	Back alignment and assigned GO terms

UNIPROTKB\|F6XU00 MPPE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E2QZ96 MPPE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5ZK82 MPPE1 "Metallophosphoesterase 1" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00015258001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (391 aa)
		(Vitis vinifera)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		383
cd08165		156	cd08165, MPP_MPPE1, human MPPE1 and related protei	3e-33
cd08165		156	cd08165, MPP_MPPE1, human MPPE1 and related protei	9e-16
cd08163		257	cd08163, MPP_Cdc1, Saccharomyces cerevisiae CDC1 a	5e-14
cd07384		171	cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae C	8e-06
cd07384		171	cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae C	2e-04

>gnl\|CDD\|163672 cd08165, MPP_MPPE1, human MPPE1 and related proteins, metallophosphatase domain	Back alignment and domain information

 Score =  120 bits (304), Expect = 3e-33
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 1/106 (0%)

Query: 56  MMVANLLLVGSDSGF-VDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDW 114
           M +A+  L+GS  G  +D+  R++ M + F+ S   L PD++ VLGD+  +G   T  +W
Sbjct: 1   MFLADTHLLGSILGHWLDKLRREWQMERSFQTSLWLLQPDVVFVLGDLFDEGKWSTDEEW 60

Query: 115 LPVLDRFHQMLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNF 160
              ++RF +M G    +P HV++G+ D+G    + T  ++     F
Sbjct: 61  EDYVERFKKMFGHPPDLPLHVVVGNHDIGFHYEMTTYKLERFEKVF 106

MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 156

>gnl\|CDD\|163672 cd08165, MPP_MPPE1, human MPPE1 and related proteins, metallophosphatase domain	Back alignment and domain information

>gnl\|CDD\|163670 cd08163, MPP_Cdc1, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

>gnl\|CDD\|163627 cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

>gnl\|CDD\|163627 cd07384, MPP_Cdc1_like, Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		383
cd08163		257	MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related	100.0
KOG3662		410	consensus Cell division control protein/predicted	100.0
cd08166		195	MPP_Cdc1_like_1 uncharacterized subgroup related t	99.96
cd07395		262	MPP_CSTP1 Homo sapiens CSTP1 and related proteins,	99.96
PRK11148		275	cyclic 3',5'-adenosine monophosphate phosphodieste	99.95
cd07396		267	MPP_Nbla03831 Homo sapiens Nbla03831 and related p	99.94
cd07402		240	MPP_GpdQ Enterobacter aerogenes GpdQ and related p	99.93
cd07384		171	MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re	99.92
cd08165		156	MPP_MPPE1 human MPPE1 and related proteins, metall	99.91
cd08164		193	MPP_Ted1 Saccharomyces cerevisiae Ted1 and related	99.91
cd07378		277	MPP_ACP5 Homo sapiens acid phosphatase 5 and relat	99.88
cd00839		294	MPP_PAPs purple acid phosphatases of the metalloph	99.88
cd07401		256	MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal	99.86
PLN02533		427	probable purple acid phosphatase	99.85
cd07399		214	MPP_YvnB Bacillus subtilis YvnB and related protei	99.83
cd00842		296	MPP_ASMase acid sphingomyelinase and related prote	99.8
cd07393		232	MPP_DR1119 Deinococcus radiodurans DR1119 and rela	99.8
cd07392		188	MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel	99.75
TIGR03729		239	acc_ester putative phosphoesterase. Members of thi	99.73
PTZ00422		394	glideosome-associated protein 50; Provisional	99.72
COG1409		301	Icc Predicted phosphohydrolases [General function	99.71
cd07383		199	MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase	99.71
PRK11340		271	phosphodiesterase YaeI; Provisional	99.7
TIGR03767		496	P_acnes_RR metallophosphoesterase, PPA1498 family.	99.68
KOG1378		452	consensus Purple acid phosphatase [Carbohydrate tr	99.68
cd07400		144	MPP_YydB Bacillus subtilis YydB and related protei	99.64
PF00149		200	Metallophos: Calcineurin-like phosphoesterase; Int	99.63
cd07388		224	MPP_Tt1561 Thermus thermophilus Tt1561 and related	99.61
cd00840		223	MPP_Mre11_N Mre11 nuclease, N-terminal metallophos	99.6
cd07404		166	MPP_MS158 Microscilla MS158 and related proteins,	99.52
KOG2679		336	consensus Purple (tartrate-resistant) acid phospha	99.51
PF12850		156	Metallophos_2: Calcineurin-like phosphoesterase su	99.5
PHA02546		340	47 endonuclease subunit; Provisional	99.49
cd07385		223	MPP_YkuE_C Bacillus subtilis YkuE and related prot	99.47
KOG1432		379	consensus Predicted DNA repair exonuclease SIA1 [G	99.44
PRK05340		241	UDP-2,3-diacylglucosamine hydrolase; Provisional	99.43
TIGR00583		405	mre11 DNA repair protein (mre11). All proteins in	99.43
COG2129		226	Predicted phosphoesterases, related to the Icc pro	99.42
TIGR00040		158	yfcE phosphoesterase, MJ0936 family. Members of th	99.4
cd07394		178	MPP_Vps29 Homo sapiens Vps29 and related proteins,	99.4
TIGR03768		492	RPA4764 metallophosphoesterase, RPA4764 family. Th	99.36
cd07379		135	MPP_239FB Homo sapiens 239FB and related proteins,	99.34
COG1408		284	Predicted phosphohydrolases [General function pred	99.33
TIGR01854		231	lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase.	99.28
cd00841		155	MPP_YfcE Escherichia coli YfcE and related protein	99.27
cd07397		238	MPP_DevT Myxococcus xanthus DevT and related prote	99.25
PF14582		255	Metallophos_3: Metallophosphoesterase, calcineurin	99.24
PRK09453		182	phosphodiesterase; Provisional	99.21
COG2908		237	Uncharacterized protein conserved in bacteria [Fun	99.18
cd07398		217	MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat	99.12
cd00838		131	MPP_superfamily metallophosphatase superfamily, me	99.1
PRK04036		504	DNA polymerase II small subunit; Validated	99.07
COG0420		390	SbcD DNA repair exonuclease [DNA replication, reco	99.06
TIGR00619		253	sbcd exonuclease SbcD. This family is based on the	99.03
cd07386		243	MPP_DNA_pol_II_small_archeal_C archeal DNA polymer	99.02
COG1768		230	Predicted phosphohydrolase [General function predi	99.0
PRK10966		407	exonuclease subunit SbcD; Provisional	99.0
COG0622		172	Predicted phosphoesterase [General function predic	98.92
cd07403		129	MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel	98.91
cd07391		172	MPP_PF1019 Pyrococcus furiosus PF1019 and related	98.8
cd07406		257	MPP_CG11883_N Drosophila melanogaster CG11883 and	98.7
KOG3770		577	consensus Acid sphingomyelinase and PHM5 phosphate	98.67
cd00845		252	MPP_UshA_N_like Escherichia coli UshA-like family,	98.63
TIGR00024		225	SbcD_rel_arch putative phosphoesterase, SbcD/Mre11	98.59
cd07410		277	MPP_CpdB_N Escherichia coli CpdB and related prote	98.58
COG1407		235	Predicted ICC-like phosphoesterases [General funct	98.48
cd00844		262	MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t	98.44
PF09423		453	PhoD: PhoD-like phosphatase; InterPro: IPR018946 T	98.39
cd07390		168	MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro	98.39
cd07408		257	MPP_SA0022_N Staphylococcus aureus SA0022 and rela	98.38
cd07387		257	MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2	98.38
COG1311		481	HYS2 Archaeal DNA polymerase II, small subunit/DNA	98.36
cd07411		264	MPP_SoxB_N Thermus thermophilus SoxB and related p	98.31
PHA02239		235	putative protein phosphatase	98.23
cd07409		281	MPP_CD73_N CD73 ecto-5'-nucleotidase and related p	98.19
PRK09558		551	ushA bifunctional UDP-sugar hydrolase/5'-nucleotid	98.12
COG4186		186	Predicted phosphoesterase or phosphohydrolase [Gen	98.11
KOG2310		646	consensus DNA repair exonuclease MRE11 [Replicatio	98.06
PRK09419		1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	98.05
cd07412		288	MPP_YhcR_N Bacillus subtilis YhcR endonuclease and	98.02
cd07407		282	MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and	97.96
cd07405		285	MPP_UshA_N Escherichia coli UshA and related prote	97.91
PRK00166		275	apaH diadenosine tetraphosphatase; Reviewed	97.9
cd07423		234	MPP_PrpE Bacillus subtilis PrpE and related protei	97.74
cd07424		207	MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do	97.72
PRK11439		218	pphA serine/threonine protein phosphatase 1; Provi	97.68
PRK13625		245	bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision	97.62
cd07422		257	MPP_ApaH Escherichia coli ApaH and related protein	97.54
PRK09968		218	serine/threonine-specific protein phosphatase 2; P	97.53
cd07425		208	MPP_Shelphs Shewanella-like phosphatases, metallop	97.5
cd00144		225	MPP_PPP_family phosphoprotein phosphatases of the	97.49
cd07413		222	MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat	97.44
cd07421		304	MPP_Rhilphs Rhilph phosphatases, metallophosphatas	97.42
PRK09419		1163	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	97.41
TIGR01530		550	nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi	97.41
TIGR00668		279	apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric	97.26
cd07382		255	MPP_DR1281 Deinococcus radiodurans DR1281 and rela	97.25
PF04042		209	DNA_pol_E_B: DNA polymerase alpha/epsilon subunit	97.17
cd08162		313	MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA	97.16
cd07380		150	MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re	96.9
COG0737		517	UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras	96.88
TIGR00282		266	metallophosphoesterase, MG_246/BB_0505 family. A m	96.72
PRK11907		814	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	96.69
PRK09418		780	bifunctional 2',3'-cyclic nucleotide 2'-phosphodie	96.64
TIGR01390		626	CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod	96.63
smart00156		271	PP2Ac Protein phosphatase 2A homologues, catalytic	96.58
cd07417		316	MPP_PP5_C PP5, C-terminal metallophosphatase domai	96.53
PRK09420		649	cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp	96.35
KOG3325		183	consensus Membrane coat complex Retromer, subunit	96.28
PTZ00244		294	serine/threonine-protein phosphatase PP1; Provisio	95.81
cd07420		321	MPP_RdgC Drosophila melanogaster RdgC and related	95.75
KOG3947		305	consensus Phosphoesterases [General function predi	95.74
PTZ00480		320	serine/threonine-protein phosphatase; Provisional	95.65
KOG2863		456	consensus RNA lariat debranching enzyme [RNA proce	95.4
COG5555		392	Cytolysin, a secreted calcineurin-like phosphatase	95.19
cd07389		228	MPP_PhoD Bacillus subtilis PhoD and related protei	95.09
PTZ00235		291	DNA polymerase epsilon subunit B; Provisional	94.89
cd07418		377	MPP_PP7 PP7, metallophosphatase domain. PP7 is a p	94.82
cd07416		305	MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca	94.78
cd07414		293	MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme	94.68
cd07415		285	MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein	94.11
PTZ00239		303	serine/threonine protein phosphatase 2A; Provision	93.93
cd07419		311	MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a	93.53
KOG0374		331	consensus Serine/threonine specific protein phosph	93.02
COG3540		522	PhoD Phosphodiesterase/alkaline phosphatase D [Ino	91.35
cd07381		239	MPP_CapA CapA and related proteins, metallophospha	86.77
PF06874		640	FBPase_2: Firmicute fructose-1,6-bisphosphatase; I	85.49
smart00854		239	PGA_cap Bacterial capsule synthesis protein PGA_ca	82.36
PF01102		122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	81.28

>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

Probab=100.00  E-value=3.3e-46  Score=348.20  Aligned_cols=241  Identities=22%  Similarity=0.349  Sum_probs=193.8

Q ss_pred             EEEecCCCCCCCC--------CcccccchHHHHHHHHHHHHhhCCCCEEEEcCCCCCCCCCCChhcHHHHHHHHHHhhcC
Q 016783           56 MMVANLLLVGSDS--------GFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGT  127 (383)
Q Consensus        56 ~~isD~hl~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~PD~vi~~GDl~d~~~~~~~~~~~~~~~~~~~i~~~  127 (383)
                      ++|||||+.+...        +.+.++..|.++++.+..++..++||+||++|||+|+|+..++++|.+++++|.++|..
T Consensus         1 ~~vaDpql~~~~sy~~~~~~~~~~~~~~~D~ylr~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~   80 (257)
T cd08163           1 ALVADPQLVDDHTYPGRPWILNTLTEHFVDNYLRRNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDP   80 (257)
T ss_pred             CcccCCccccCCccCCCchhhhhhhHHhhHHHHHHHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcC
Confidence            4789999998642        23456788999999999988899999999999999999988899999999999999975


Q ss_pred             C-CCCcEEEecCCCCCCCCCCCChhHHHHHHhhCCCCCCCCCceEEECCEEEEEecccccccCCCccccchHHHHhHhhH
Q 016783          128 F-LGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESI  206 (383)
Q Consensus       128 ~-~~~p~~~v~GNHD~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~~~~~v~fi~Lds~~~~~~~~~~~~~~~~~l~~~~~  206 (383)
                      . ..+|+++||||||+|+++.......++|++.||..+    ++++++|++||+|||+.+.+...+  .....+..++..
T Consensus        81 ~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~Fg~~~----~~~~~~~~~fV~Lds~~l~~~~~~--~~~~~~~~~l~~  154 (257)
T cd08163          81 SPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYFGPTS----RVIDVGNHTFVILDTISLSNKDDP--DVYQPPREFLHS  154 (257)
T ss_pred             CCccceEEEeCCCcccCCCCCCCHHHHHHHHHHhCCCc----eEEEECCEEEEEEccccccCCccc--ccchhHHHHHHh
Confidence            3 247999999999998877666666899999999754    799999999999999987653322  111112222211


Q ss_pred             HHHHhhccccccccccccchhhhhccCCCCCCEEEeeccCccCCCCCCCCCcCCcccccCCCCCCCccccccCChHHHHH
Q 016783          207 DLRMEAKGSAEAVHDFSNFAWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEY  286 (383)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~Pl~~~~~~~c~~~~~~~~~~~~~~~~g~y~~~~~l~~e~~~~  286 (383)
                      .+                     +...+..++||++|+|+++.++..||+.|++.....  .+. +|+||++|+++.+..
T Consensus       155 ~l---------------------~~~~~~~p~ILl~H~Plyr~~~~~cg~~re~~~~~~--~~~-g~~yq~~l~~~~s~~  210 (257)
T cd08163         155 FS---------------------AMKVKSKPRILLTHVPLYRPPNTSCGPLRESKTPLP--YGY-GYQYQNLLEPSLSEV  210 (257)
T ss_pred             hh---------------------hccCCCCcEEEEeccccccCCCCCCCCccccCCCCC--CCC-CccceeecCHHHHHH
Confidence            11                     012345566999999999999999999887743221  123 378999999999999


Q ss_pred             HHHHcCCceEEeccCCCCceeecC-------CCceEEEecceeccCC
Q 016783          287 IFQALKPKIIFSAHAHEFCDYTHS-------DGTREVTVSAMTWKAR  326 (383)
Q Consensus       287 ll~~~~v~lvfsGH~H~~~~~~~~-------~~~~eitv~S~s~~~g  326 (383)
                      ||+.++|.+|||||+|++|++.|+       ++++|+||+||||.||
T Consensus       211 il~~~~P~~vfsGhdH~~C~~~h~~~~~~~~~~~~E~tv~S~s~~~g  257 (257)
T cd08163         211 ILKAVQPVIAFSGDDHDYCEVVHEYQFNGKSGSTREITVKSISMAMG  257 (257)
T ss_pred             HHHhhCCcEEEecCCCccceeEcccccCCCCCCceEEEecccccccC
Confidence            999999999999999999999998       5799999999999997

Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site

>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]	Back alignment and domain information

>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain	Back alignment and domain information

>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional	Back alignment and domain information

>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain	Back alignment and domain information

>PLN02533 probable purple acid phosphatase	Back alignment and domain information

>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain	Back alignment and domain information

>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain	Back alignment and domain information

>TIGR03729 acc_ester putative phosphoesterase	Back alignment and domain information

>PTZ00422 glideosome-associated protein 50; Provisional	Back alignment and domain information

>COG1409 Icc Predicted phosphohydrolases [General function prediction only]	Back alignment and domain information

>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK11340 phosphodiesterase YaeI; Provisional	Back alignment and domain information

>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family	Back alignment and domain information

>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain	Back alignment and domain information

>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11	Back alignment and domain information

>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain	Back alignment and domain information

>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily []	Back alignment and domain information

>PHA02546 47 endonuclease subunit; Provisional	Back alignment and domain information

>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain	Back alignment and domain information

>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]	Back alignment and domain information

>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional	Back alignment and domain information

>TIGR00583 mre11 DNA repair protein (mre11)	Back alignment and domain information

>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]	Back alignment and domain information

>TIGR00040 yfcE phosphoesterase, MJ0936 family	Back alignment and domain information

>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain	Back alignment and domain information

>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family	Back alignment and domain information

>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain	Back alignment and domain information

>COG1408 Predicted phosphohydrolases [General function prediction only]	Back alignment and domain information

>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase	Back alignment and domain information

>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain	Back alignment and domain information

>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A	Back alignment and domain information

>PRK09453 phosphodiesterase; Provisional	Back alignment and domain information

>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	Back alignment and domain information

>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>PRK04036 DNA polymerase II small subunit; Validated	Back alignment and domain information

>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]	Back alignment and domain information

>TIGR00619 sbcd exonuclease SbcD	Back alignment and domain information

>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain	Back alignment and domain information

>COG1768 Predicted phosphohydrolase [General function prediction only]	Back alignment and domain information

>PRK10966 exonuclease subunit SbcD; Provisional	Back alignment and domain information

>COG0622 Predicted phosphoesterase [General function prediction only]	Back alignment and domain information

>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]	Back alignment and domain information

>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain	Back alignment and domain information

>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related	Back alignment and domain information

>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]	Back alignment and domain information

>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain	Back alignment and domain information

>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B	Back alignment and domain information

>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain	Back alignment and domain information

>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]	Back alignment and domain information

>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>PHA02239 putative protein phosphatase	Back alignment and domain information

>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed	Back alignment and domain information

>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]	Back alignment and domain information

>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]	Back alignment and domain information

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>PRK00166 apaH diadenosine tetraphosphatase; Reviewed	Back alignment and domain information

>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain	Back alignment and domain information

>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional	Back alignment and domain information

>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional	Back alignment and domain information

>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain	Back alignment and domain information

>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional	Back alignment and domain information

>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain	Back alignment and domain information

>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain	Back alignment and domain information

>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain	Back alignment and domain information

>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN	Back alignment and domain information

>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	Back alignment and domain information

>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain	Back alignment and domain information

>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast	Back alignment and domain information

>cd08162 MPP_PhoA_N Synechococcus sp	Back alignment and domain information

>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain	Back alignment and domain information

>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]	Back alignment and domain information

>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family	Back alignment and domain information

>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed	Back alignment and domain information

>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase	Back alignment and domain information

>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain	Back alignment and domain information

>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain	Back alignment and domain information

>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed	Back alignment and domain information

>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional	Back alignment and domain information

>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain	Back alignment and domain information

>KOG3947 consensus Phosphoesterases [General function prediction only]	Back alignment and domain information

>PTZ00480 serine/threonine-protein phosphatase; Provisional	Back alignment and domain information

>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]	Back alignment and domain information

>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]	Back alignment and domain information

>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain	Back alignment and domain information

>PTZ00235 DNA polymerase epsilon subunit B; Provisional	Back alignment and domain information

>cd07418 MPP_PP7 PP7, metallophosphatase domain	Back alignment and domain information

>cd07416 MPP_PP2B PP2B, metallophosphatase domain	Back alignment and domain information

>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain	Back alignment and domain information

>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain	Back alignment and domain information

>PTZ00239 serine/threonine protein phosphatase 2A; Provisional	Back alignment and domain information

>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain	Back alignment and domain information

>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]	Back alignment and domain information

>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain	Back alignment and domain information

>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []	Back alignment and domain information

>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap	Back alignment and domain information

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		383
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 46/358 (12%), Positives = 96/358 (26%), Gaps = 132/358 (36%)

Query: 3   GIAWISL-------LPLIIVTSLIIYDEWVSTPSCKIMPSADPNDYEPGPNSGSGVDLKV 55
            I W++L         L ++  L              +   DPN +    +  S + L++
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKL-----------LYQI---DPN-WTSRSDHSSNIKLRI 227

Query: 56  MMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWL 115
             +   L          R            K +     + LLVL +V             
Sbjct: 228 HSIQAEL----------RRL-------LKSKPY----ENCLLVLLNV-----------QN 255

Query: 116 P-VLDRFH---QMLGT--------FLGV--PFHVLLGDRDVG----ECSGLDTGSVDWIA 157
               + F+   ++L T        FL      H+ L    +     E   L    + ++ 
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL---LLKYLD 312

Query: 158 GNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRF------SVEKVIETESIDLRME 211
                L        E+   +   L+ +A    +    +      + +K+  T  I+  + 
Sbjct: 313 CRPQDLPR------EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL--TTIIESSLN 364

Query: 212 AKGSAEAVHDFSNFA----------------WRE----------KAMSSKSGPVLL---- 241
               AE    F   +                W +            +   S   L+    
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS---LVEKQP 421

Query: 242 --LHFPLH-RTMESQCGSQISNTREKRR-----FSEPGPYGLLHAVPLNATEYIFQAL 291
                 +    +E +   ++ N     R     ++ P  +     +P    +Y +  +
Sbjct: 422 KESTISIPSIYLELKV--KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		383
3ib7_A		330	ICC protein; metallophosphoesterase, alpha-beta fo	99.92
3d03_A		274	Phosphohydrolase; glycerophosphodiesterase, metall	99.91
2nxf_A		322	Putative dimetal phosphatase; dinuclear metal cent	99.9
2xmo_A		443	LMO2642 protein; phosphodiesterase, hydrolase; 1.7	99.9
3tgh_A		342	Glideosome-associated protein 50; phosphatase fold	99.88
1ute_A		313	Protein (II purple acid phosphatase); tartrate res	99.85
1xzw_A		426	Purple acid phosphatase; hydrolase; HET: NAG FUC M	99.82
2qfp_A		424	Purple acid phosphatase; binuclear, Fe-Zn, hydrola	99.78
1uf3_A		228	Hypothetical protein TT1561; metallo-dependent pho	99.74
2yvt_A		260	Hypothetical protein AQ_1956; structural genomics,	99.73
2q8u_A		336	Exonuclease, putative; structural genomics, joint	99.67
3rl5_A		296	Metallophosphoesterase mpped2; alpha-beta fold, me	99.65
3av0_A		386	DNA double-strand break repair protein MRE11; DNA	99.6
1z2w_A		192	Vacuolar protein sorting 29; VPS29, retromer, phos	99.58
2a22_A		215	Vacuolar protein sorting 29; alpha-beta-BETA-alpha	99.55
2yeq_A		527	Apased, PHOD, alkaline phosphatase D; hydrolase, p	99.53
4fbw_A		417	DNA repair protein RAD32; DNA double-strand break	99.51
3tho_B		379	Exonuclease, putative; adenosine triphosphate, bac	99.48
1s3l_A		190	Hypothetical protein MJ0936; phosphodiesterase, nu	99.48
3t1i_A		431	Double-strand break repair protein MRE11A; DNA rep	99.48
4fbk_A		472	DNA repair and telomere maintenance protein NBS1,	99.47
1xm7_A		195	Hypothetical protein AQ_1665; structural genomics,	99.43
1nnw_A		252	Hypothetical protein; structural genomics, PSI, pr	99.43
3rqz_A		246	Metallophosphoesterase; PSI-biology, midwest cente	99.38
3qfm_A		270	SAPH, putative uncharacterized protein; sandwich f	99.35
1ii7_A		333	MRE11 nuclease; RAD50, DNA double-strand break rep	99.34
3ck2_A		176	Conserved uncharacterized protein (predicted phosp	99.33
2kkn_A		178	Uncharacterized protein; protein phosphatase 2A ho	99.3
1su1_A		208	Hypothetical protein YFCE; structural genomics, ph	99.22
1hp1_A		516	5'-nucleotidase; metallophosphatase, dinuclear, me	98.55
2z1a_A		552	5'-nucleotidase; metal-binding, nucleotide-binding	98.51
3qfk_A		527	Uncharacterized protein; structural genomics, cent	98.38
2wdc_A		562	SOXB, sulfur oxidation protein SOXB; sulfur-sulfur	98.37
4h2g_A		546	5'-nucleotidase; dimer, hydrolase, phosphatase, ex	98.28
3ive_A		509	Nucleotidase; structural genomics, PSI-2, protein	98.18
3ztv_A		579	NAD nucleotidase, NADN; hydrolase, NAD pyrophospha	98.06
3e0j_A		476	DNA polymerase subunit delta-2; DNA polymerase del	97.97
2qjc_A		262	Diadenosine tetraphosphatase, putative; putative d	97.94
1g5b_A		221	Serine/threonine protein phosphatase; bacteriophag	97.88
1wao_1		477	Serine/threonine protein phosphatase 5; hydrolase,	97.81
2dfj_A		280	Diadenosinetetraphosphatase; helices and strands m	97.75
3c9f_A		557	5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p	97.43
4h1s_A		530	5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo	97.38
2z72_A		342	Protein-tyrosine-phosphatase; cold-active enzyme,	97.19
2ie4_C		309	PP2A-alpha;, serine/threonine-protein phosphatase	97.17
3h63_A		315	Serine/threonine-protein phosphatase 5; metalloenz	97.05
3jyf_A		339	2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n	97.04
3gve_A		341	YFKN protein; alpha-beta-BETA-alpha sandwich, stru	96.97
3icf_A		335	PPT, serine/threonine-protein phosphatase T; IRO m	96.8
1fjm_A		330	Protein serine/threonine phosphatase-1 (alpha ISO	96.77
3e7a_A		299	PP-1A, serine/threonine-protein phosphatase PP1-al	96.52
3ll8_A		357	Serine/threonine-protein phosphatase 2B catalytic	96.28
1aui_A		521	Calcineurin, serine/threonine phosphatase 2B; hydr	96.12
2z06_A		252	Putative uncharacterized protein TTHA0625; metal b	95.24
1t70_A		255	Phosphatase; crystal, X-RAY crystallography, struc	95.19
3flo_A		460	DNA polymerase alpha subunit B; protein-protein co	94.57
1t71_A		281	Phosphatase, conserved HYPO; crystal, X-RAY crysta	90.86

>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A	Back alignment and structure

Probab=99.92  E-value=1.9e-23  Score=200.10  Aligned_cols=243  Identities=15%  Similarity=0.175  Sum_probs=149.8

Q ss_pred             CCCceEEEEEecCCCCCCCCCcccccchHHHHHHHHHHHHhh--CCCCEEEEcCCCCCCCCCCChhcHHHHHHHHHHhhc
Q 016783           49 SGVDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFHT--LNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLG  126 (383)
Q Consensus        49 ~~~~~~i~~isD~hl~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~PD~vi~~GDl~d~~~~~~~~~~~~~~~~~~~i~~  126 (383)
                      +.+.+||+++||+|+................+.+.+.. +++  .+||+||++||+++.+..   +++....+.+..+.+
T Consensus        22 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~-i~~~~~~~d~vi~~GDl~~~~~~---~~~~~~~~~l~~l~~   97 (330)
T 3ib7_A           22 PRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQ-LNQSGLRPDAIVFTGDLADKGEP---AAYRKLRGLVEPFAA   97 (330)
T ss_dssp             CCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHH-HHHHTCCCSEEEECSCCBTTCCH---HHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHH-HHhcCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHHHh
Confidence            45689999999999965432222222233344444433 444  799999999999998753   333332233332211


Q ss_pred             CCCCCcEEEecCCCCCCCCCCCChhHHHHHHhhCCCCCCCCCceEEECCEEEEEecccccccCCCccccchHHHHhHhhH
Q 016783          127 TFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESI  206 (383)
Q Consensus       127 ~~~~~p~~~v~GNHD~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~~~~~v~fi~Lds~~~~~~~~~~~~~~~~~l~~~~~  206 (383)
                       ..++|+++|+||||...      ...+.+.. ........+++++.++++|+++|+.......   ....+.|+.|+..
T Consensus        98 -~~~~pv~~v~GNHD~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~---~~~~~~q~~wl~~  166 (330)
T 3ib7_A           98 -QLGAELVWVMGNHDDRA------ELRKFLLD-EAPSMAPLDRVCMIDGLRIIVLDTSVPGHHH---GEIRASQLGWLAE  166 (330)
T ss_dssp             -HHTCEEEECCCTTSCHH------HHHHHHHC-CCCCCSCCCEEEEETTEEEEECCCCCTTCCS---BCCCHHHHHHHHH
T ss_pred             -hcCCCEEEeCCCCCCHH------HHHHHhcc-cccccCCcceEEEeCCEEEEEecCCCCCCCC---CccCHHHHHHHHH
Confidence             12579999999999731      01122211 1111122457899999999999998643211   2234556766644


Q ss_pred             HHHHhhccccccccccccchhhhhccCCCCCCEEEeeccCccCCCCCCCCCcCCcccccCCCCCCCccccccCChHHHHH
Q 016783          207 DLRMEAKGSAEAVHDFSNFAWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEY  286 (383)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~Pl~~~~~~~c~~~~~~~~~~~~~~~~g~y~~~~~l~~e~~~~  286 (383)
                      .+.                      ......+|+++|||++....   ...                ......+.+.+.+
T Consensus       167 ~l~----------------------~~~~~~~iv~~Hh~p~~~~~---~~~----------------~~~~~~~~~~l~~  205 (330)
T 3ib7_A          167 ELA----------------------TPAPDGTILALHHPPIPSVL---DMA----------------VTVELRDQAALGR  205 (330)
T ss_dssp             HTT----------------------SCCTTCEEEECSSCSSCCSS---GGG----------------GGGSBSCHHHHHH
T ss_pred             HHH----------------------hcccCCeEEEEECCCCCCCc---ccc----------------ccccccCHHHHHH
Confidence            331                      12334468999999876321   000                1112335667888


Q ss_pred             HHHHcCCceEEeccCCCCceeecCCCceEEEecceeccC------------CCCCcEEEEEEeCCCceEEEeEeec
Q 016783          287 IFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWKA------------RDDPGFVIANFHGNGRGVSVSYCSL  350 (383)
Q Consensus       287 ll~~~~v~lvfsGH~H~~~~~~~~~~~~eitv~S~s~~~------------g~~pgy~ll~i~~~~~~~~~~~c~l  350 (383)
                      ++++.+++++|+||+|....... +++..++.+|++...            +..+||+++++++++  +..+..-+
T Consensus       206 ~l~~~~v~~v~~GH~H~~~~~~~-~g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~--~~~~~v~~  278 (330)
T 3ib7_A          206 VLRGTDVRAILAGHLHYSTNATF-VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT--VVHSVIPL  278 (330)
T ss_dssp             HHTTSSEEEEEECSSSSCEEEEE-TTEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSC--EEEEEEEC
T ss_pred             HHhccCceEEEECCCCCcccceE-CCEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEECCC--eEEEEecc
Confidence            99999999999999999986665 478888888876311            134799999999877  55444443

PyMOL of 3ib7

>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A	Back alignment and structure

>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12	Back alignment and structure

>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}	Back alignment and structure

>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}	Back alignment and structure

>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*	Back alignment and structure

>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1	Back alignment and structure

>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*	Back alignment and structure

>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6	Back alignment and structure

>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6	Back alignment and structure

>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A	Back alignment and structure

>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*	Back alignment and structure

>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*	Back alignment and structure

>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A	Back alignment and structure

>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7	Back alignment and structure

>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}	Back alignment and structure

>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*	Back alignment and structure

>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C	Back alignment and structure

>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A	Back alignment and structure

>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}	Back alignment and structure

>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*	Back alignment and structure

>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8	Back alignment and structure

>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A	Back alignment and structure

>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0	Back alignment and structure

>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*	Back alignment and structure

>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A	Back alignment and structure

>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7	Back alignment and structure

>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}	Back alignment and structure

>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7	Back alignment and structure

>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A	Back alignment and structure

>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2	Back alignment and structure

>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}	Back alignment and structure

>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A	Back alignment and structure

>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*	Back alignment and structure

>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*	Back alignment and structure

>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*	Back alignment and structure

>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}	Back alignment and structure

>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}	Back alignment and structure

>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3	Back alignment and structure

>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3	Back alignment and structure

>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}	Back alignment and structure

>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2	Back alignment and structure

>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}	Back alignment and structure

>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A	Back alignment and structure

>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*	Back alignment and structure

>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A	Back alignment and structure

>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}	Back alignment and structure

>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}	Back alignment and structure

>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}	Back alignment and structure

>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3	Back alignment and structure

>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*	Back alignment and structure

>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A	Back alignment and structure

>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3	Back alignment and structure

>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A	Back alignment and structure

>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9	Back alignment and structure

>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}	Back alignment and structure

>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		383
d2nxfa1		320	d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo	1e-06

>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: ADPRibase-Mn-like
domain: Uncharacterized C17orf48 homolog zgc:64213
species: Zebrafish (Danio rerio) [TaxId: 7955]

 Score = 47.5 bits (111), Expect = 1e-06
 Identities = 31/287 (10%), Positives = 68/287 (23%), Gaps = 17/287 (5%)

Query: 66  SDSGFVDRHFRD--YYMAKFFRKSFHTLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQ 123
           +      R++R     +     + +       ++ LGD+   G    R      LD    
Sbjct: 22  NYLRTRRRYYRGSADLLRDAVLQ-WRRERVQCVVQLGDI-IDGHNRRRDASDRALDTVMA 79

Query: 124 MLGTFLGVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPGLDSSGCGAFEISNISFLSLNA 183
            L     V  H + G+ +    S     S    +    G D+      +       S   
Sbjct: 80  ELDA-CSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAP 138

Query: 184 VALLCGNNKLRFSVEKVIETESIDLRMEAKGSAEAVHDFSNFAWREKAMSSKSGPVLLLH 243
                  +    SV  +   E  +    +       +                   +  +
Sbjct: 139 NFRFVLLDAYDLSV--IGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFN 196

Query: 244 FPLHRTMESQCGSQISNTREKRRFS-------EPGPYGLLHAVPLNATEY---IFQALKP 293
                       + ++ +  K+                    +  N       +      
Sbjct: 197 GGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSV 256

Query: 294 KIIFSAHAHEFCDYTHSDGTREVTVSAMTWKARDDPGFVIANFHGNG 340
               + H H+    T S G + +T+  +         F  A  + + 
Sbjct: 257 LCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATAYLYEDR 303

PyMOL of d2nxfa1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		383
d2hy1a1		256	Rv0805 cyclic nucleotide phosphodiesterase {Mycoba	99.95
d3d03a1		271	Glycerophosphodiesterase GpdQ {Enterobacter aeroge	99.93
d2nxfa1		320	Uncharacterized C17orf48 homolog zgc:64213 {Zebraf	99.89
d2qfra2		312	Plant purple acid phosphatase, catalytic domain {K	99.88
d1utea_		302	Mammalian purple acid phosphatase {Pig (Sus scrofa	99.81
d2yvta1		257	Uncharacterized protein Aq_1956 {Aquifex aeolicus	99.74
d1uf3a_		228	Hypothetical protein TT1561 {Thermus thermophilus	99.73
d2a22a1		193	Vacuolar protein sorting 29, VPS29 {Cryptosporidiu	99.47
d1ii7a_		333	Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	99.47
d1z2wa1		182	Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus	99.43
d1s3la_		165	Putative phosphodiesterase MJ0936 {Methanococcus j	99.35
d1nnwa_		251	Hypothetical protein PF1291 {Archaeon Pyrococcus f	99.29
d1su1a_		184	Phosphodiesterase yfcE {Escherichia coli [TaxId: 5	99.18
d3ck2a1		173	Uncharacterized protein SP1879 {Streptococcus pneu	99.14
d1xm7a_		188	Hypothetical protein aq_1666 {Aquifex aeolicus [Ta	98.91
d1usha2		337	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	98.48
d3c9fa2		322	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	97.76
d2z1aa2		302	5'-nucleotidase (syn. UDP-sugar hydrolase), N-term	97.63
d1g5ba_		219	lambda ser/thr protein phosphatase {Bacteriophage	97.52
d1auia_		473	Protein phosphatase-2B (PP-2B, calcineurin A subun	94.96
d1jk7a_		294	Protein phosphatase-1 (PP-1) {Human (Homo sapiens)	93.97
d1s95a_		324	Serine/threonine protein phosphatase 5, PP5 {Human	90.77
d3c5wc1		288	Protein phosphatase 2A catalytic subunit alpha iso	89.03

>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: GpdQ-like
domain: Rv0805 cyclic nucleotide phosphodiesterase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=4.3e-27  Score=216.18  Aligned_cols=231  Identities=15%  Similarity=0.173  Sum_probs=141.7

Q ss_pred             CceEEEEEecCCCCCCCCCcccccchHHHHHHHHHHHHh-hCCCCEEEEcCCCCCCCCCCChhcHHHHHHHHHHhhcCCC
Q 016783           51 VDLKVMMVANLLLVGSDSGFVDRHFRDYYMAKFFRKSFH-TLNPDMLLVLGDVSAKGSELTRSDWLPVLDRFHQMLGTFL  129 (383)
Q Consensus        51 ~~~~i~~isD~hl~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~PD~vi~~GDl~d~~~~~~~~~~~~~~~~~~~i~~~~~  129 (383)
                      ..+||+||||+|+.....+..........+.+++..+.+ ..+||+|+++|||++.|.....+.+.+.+.++...    .
T Consensus         3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~~~~~~~~~~~l~~~~~~----~   78 (256)
T d2hy1a1           3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQ----L   78 (256)
T ss_dssp             CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCCHHHHHHHHHHHHHHHHH----H
T ss_pred             CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCChhHHHHHHHHhhhhhhh----c
Confidence            479999999999965432222222333344444444332 35899999999999987642222222223323222    2


Q ss_pred             CCcEEEecCCCCCCCCCCCChhHHHHHHhhCCC---CCCCCCceEEECCEEEEEecccccccCCCccccchHHHHhHhhH
Q 016783          130 GVPFHVLLGDRDVGECSGLDTGSVDWIAGNFPG---LDSSGCGAFEISNISFLSLNAVALLCGNNKLRFSVEKVIETESI  206 (383)
Q Consensus       130 ~~p~~~v~GNHD~~~~~~~~~~~~~~f~~~f~~---~~~~~~~~~~~~~v~fi~Lds~~~~~~~~~~~~~~~~~l~~~~~  206 (383)
                      ++|+++|+||||..          ..|.+.+..   .....++.+..++++|+++||.......   ....+++++|+++
T Consensus        79 ~~p~~~v~GNHD~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~---g~~~~~~~~wl~~  145 (256)
T d2hy1a1          79 GAELVWVMGNHDDR----------AELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHH---GEIRASQLGWLAE  145 (256)
T ss_dssp             TCEEEECCCTTSCH----------HHHHHHTTCCCCCCSCCCEEEEETTEEEEECCCBCTTCSS---BCCCHHHHHHHHH
T ss_pred             CCCEEEEcccccch----------hhhhhhhccccccccccceEEEecccceeeeeeeecCCcC---CcccHHHHHHHHH
Confidence            68999999999942          233443321   1122457889999999999997543221   1234556777654


Q ss_pred             HHHHhhccccccccccccchhhhhccCCCCCCEEEeeccCccCCCCCCCCCcCCcccccCCCCCCCccccccCChHHHHH
Q 016783          207 DLRMEAKGSAEAVHDFSNFAWREKAMSSKSGPVLLLHFPLHRTMESQCGSQISNTREKRRFSEPGPYGLLHAVPLNATEY  286 (383)
Q Consensus       207 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~H~Pl~~~~~~~c~~~~~~~~~~~~~~~~g~y~~~~~l~~e~~~~  286 (383)
                      .+.                      ..+.++.||++|||++.....   ..                ......+.+...+
T Consensus       146 ~L~----------------------~~~~~~~iv~~Hhpp~~~~~~---~~----------------~~~~~~~~~~~~~  184 (256)
T d2hy1a1         146 ELA----------------------TPAPDGTILALHHPPIPSVLD---MA----------------VTVELRDQAALGR  184 (256)
T ss_dssp             HHT----------------------SCCTTCEEEECSSCSSCCSSH---HH----------------HTTSBCCHHHHHH
T ss_pred             HHH----------------------hhhccCceeeeecCCcccccc---cc----------------cccccccHHHHHH
Confidence            432                      123455689999998763210   00                1112235677889


Q ss_pred             HHHHcCCceEEeccCCCCceeecCCCceEEEecceecc------CC------CCCcEEEEEEeCCC
Q 016783          287 IFQALKPKIIFSAHAHEFCDYTHSDGTREVTVSAMTWK------AR------DDPGFVIANFHGNG  340 (383)
Q Consensus       287 ll~~~~v~lvfsGH~H~~~~~~~~~~~~eitv~S~s~~------~g------~~pgy~ll~i~~~~  340 (383)
                      ++++.+++++||||+|..+.... +|++.+++||.+++      .|      ..+||.++++.+++
T Consensus       185 i~~~~~v~~~~~GH~H~~~~~~~-~gi~~~~~~s~~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~  249 (256)
T d2hy1a1         185 VLRGTDVRAILAGHLHYSTNATF-VGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT  249 (256)
T ss_dssp             HHTTSSEEEEEECSSSSCEEEEE-TTEEEEECCCCC-------------------CEEEEEECSSC
T ss_pred             HHhccCceEEEccccchhhceEE-CCEEEEEcCCccccccccCCCCCcccccCCCCEEEEEEECCC
Confidence            99999999999999999887666 47999999987642      11      24799999999888

PyMOL of d2hy1a1

>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}	Back information, alignment and structure

>d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]}	Back information, alignment and structure

>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}	Back information, alignment and structure

>d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]}	Back information, alignment and structure

>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}	Back information, alignment and structure

>d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]}	Back information, alignment and structure

>d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]}	Back information, alignment and structure

>d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]}	Back information, alignment and structure

>d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]}	Back information, alignment and structure

>d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]}	Back information, alignment and structure

>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]}	Back information, alignment and structure

>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure