Citrus Sinensis ID: 016850

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
Protein Sequence
MCKSKRSTDMITPRRRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVSMAPR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccHHHHHHHHcccccccccccccccEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHHccccccccEEEEEEEccEEEEEEEEcccccHHHHHcccccccccccccHHHHHHHccEEEcccccccccccccccccccccccccccccccccEEEEccccccHHHHcccccccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEcccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccEcHHHHHHHHccccHHHccccccccEEEEEccccEEEEEEEcccccccHHHHHHHHHHHHHHHcccHHEEEEEEEccccEEEEEEEcccccHHHHHccccccccHHHHHHHHccccccEEEEcccHccccHHHHHccHHEEccccccccccEEEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHccHHHcccccHHHHHHHHHHHHHHHcccHcccccHHHHHHHHccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mckskrstdmitprrrcrssrpskcsfnssksssndsssdpssstlnfsstnyyhnsntssvinSSSSLQTLkkslpenphiyhLSEICAATNNFLakkftsssasaswrgtirgkdvIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACvsgncgylvyehvsganladclrnprnpsfTVLSTWLSRMQSSSIIVSEENAGSLCAKICHfgtaelcgevsgnesgkvnkiegtrgymapefqasgvvtqkcdvyAFGVVVLELLSGEEVLKFVFdegidgyrrvsvvdkaseavaggvggvrkwvdrrlkdsypVEVAEKMVLLGLqcvdedpgkrpdmrqVTGLVSKMYLEsknwadkigfptdfsvsmapr
Flexible Loop (DISEMBL)
mckskrstdmitprrrcrssrpskcsfnssksssndsssdpssSTLNFSSTNYYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTsssasaswrgtirgkdviifqrklrrsldleQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAElcgevsgnesGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSvvdkaseavaggvggvrkwvdrrlKDSYPVEVAEKMVLLGlqcvdedpgkrpdMRQVTGLVSKMYlesknwadkigfptdfsvsmapr
Low Complexity Region (SEG)
MCKSKRSTDMITprrrcrssrpskcsfnssksssndsssdpssstlnfsstnyyhnsntssvinsssslqtlkkslPENPHIYHLSEICAATNNFLAKKFTsssasasWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFgvvvlellsgeevlKFVFDEGIDGYRRVSVVDKASEavaggvggvRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVSMAPR
Disordered region (IsUnstruct)
********************************************************************************HIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVD***********VTGLVSKMYLESKNWADKIGFPT*********
Disordered Region (DISOPRED)
*********************************************************************************IYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKL*****LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVL*********GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK*************************
Disordered Region (DISEMBL)
*********************************************LNFSSTNYYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKK*********WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVSMAPR
Disordered Region (DISPRO)
*C***RSTDMITPRRRCRSSRPSK******************************************************NPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY***********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCKSKRSTDMITPRRRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVSMAPR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	381	2.2.26 [Sep-21-2011]
F4IB81	651	LysM domain receptor-like	no	no	0.724	0.423	0.292	1e-30
A8R7E6	617	Chitin elicitor receptor	no	no	0.679	0.419	0.315	7e-28
O22808	664	Protein LYK5 OS=Arabidops	no	no	0.845	0.484	0.267	7e-26
Q9T058	849	G-type lectin S-receptor-	no	no	0.677	0.303	0.274	6e-23
D7UPN3	605	Chitin elicitor receptor	no	no	0.632	0.398	0.281	2e-22
O64483	876	Senescence-induced recept	no	no	0.732	0.318	0.262	7e-22
C0LGE0	1014	Probable LRR receptor-lik	no	no	0.679	0.255	0.302	8e-22
Q9SY95	802	G-type lectin S-receptor-	no	no	0.792	0.376	0.257	2e-21
O04567	601	Probable inactive recepto	no	no	0.724	0.459	0.282	2e-21
Q9LK03	717	Proline-rich receptor-lik	no	no	0.671	0.357	0.280	4e-21

>sp|F4IB81|LYK3_ARATH LysM domain receptor-like kinase 3 OS=Arabidopsis thaliana GN=LYK3 PE=2 SV=1

 Score =  134 bits (336), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 45/321 (14%)

Query: 78  ENPHIYHLSEICAATNNFLAKKFTSSSASAS-WRGTIRGKDVIIFQRKLRRSLDLEQLRE 136
           E P ++   EI AAT+ F            S + G +R ++V +   K   +   ++   
Sbjct: 324 EKPMVFTYEEIRAATDEFSDSNLLGHGNYGSVYFGLLREQEVAV---KRMTATKTKEFAA 380

Query: 137 RLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM 196
            + V+C+ HHS+L++L+G   + +  ++VYE+V    L   L +P++   T LS W+ R 
Sbjct: 381 EMKVLCKVHHSNLVELIGYAATVDELFVVYEYVRKGMLKSHLHDPQSKGNTPLS-WIMRN 439

Query: 197 Q--------------------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGN 230
           Q                          +S+I++ E    +  AKI  FG A+L  E +G 
Sbjct: 440 QIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDE----AFRAKISDFGLAKLV-EKTGE 494

Query: 231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR 290
               V K+ GT GY+APE+ + G+ T K D+YAFGVV+ E++SG E +      G     
Sbjct: 495 GEISVTKVVGTYGYLAPEYLSDGLATSKSDIYAFGVVLFEIISGREAVIRTEAIGTKNPE 554

Query: 291 R-------VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK 343
           R       ++V+  + +++   +  ++++VD  + D YP +   K+  L  QCVD+DP  
Sbjct: 555 RRPLASIMLAVLKNSPDSM--NMSSLKEFVDPNMMDLYPHDCLFKIATLAKQCVDDDPIL 612

Query: 344 RPDMRQVTGLVSKMYLESKNW 364
           RP+M+QV   +S++ L S  W
Sbjct: 613 RPNMKQVVISLSQILLSSIEW 633

Putative Lysin motif (LysM) receptor kinase that may recognize microbe-derived N-acetylglucosamine (NAG)-containing ligands.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|A8R7E6|CERK1_ARATH Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1

 Score =  125 bits (313), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 55/314 (17%)

Query: 83  YHLSEICAATNNF-LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLE---QLRERL 138
           + L E+  AT+NF L+ K       A +   +RG+   I      + +D+E   Q    L
Sbjct: 310 FSLEELAKATDNFNLSFKIGQGGFGAVYYAELRGEKAAI------KKMDMEASKQFLAEL 363

Query: 139 SVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNP-RNPSFTVLSTWLSRMQ 197
            V+ R HH +L++L+G CV G+  +LVYE+V   NL   L    R P       W  R+Q
Sbjct: 364 KVLTRVHHVNLVRLIGYCVEGSL-FLVYEYVENGNLGQHLHGSGREPL-----PWTKRVQ 417

Query: 198 --------------------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
                                     S++I++ ++      AK+  FG  +L  EV G+ 
Sbjct: 418 IALDSARGLEYIHEHTVPVYVHRDIKSANILIDQK----FRAKVADFGLTKLT-EVGGSA 472

Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE-EVLKFVFDEGIDGYR 290
           +       GT GYMAPE    G V+ K DVYAFGVV+ EL+S +  V+K    E +  +R
Sbjct: 473 T---RGAMGTFGYMAPE-TVYGEVSAKVDVYAFGVVLYELISAKGAVVKMT--EAVGEFR 526

Query: 291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
            +  V + S         +RK +D RL DSYP +   KM  LG  C  E+   RP MR +
Sbjct: 527 GLVGVFEESFKETDKEEALRKIIDPRLGDSYPFDSVYKMAELGKACTQENAQLRPSMRYI 586

Query: 351 TGLVSKMYLESKNW 364
              +S ++  + NW
Sbjct: 587 VVALSTLFSSTGNW 600

Lysin motif (LysM) receptor kinase that functions as a cell surface receptor in chitin elicitor (chitooligosaccharides) signaling leading to innate immunity toward both biotic and abiotic stresses (e.g. tolerance to salinity, heavy-metal stresses, and Botrytis cinerea infection). Recognizes microbe-derived N-acetylglucosamine (NAG)-containing ligands. Involved in the resistance to pathogenic fungi Alternaria brassicicola and Erysiphe cichoracearum, probably by sensing microbe-associated molecular patterns (MAMP) and pathogen-associated molecular patterns (PAMP). Plays an essential role in detecting peptidoglycans (e.g. PGNs) and restricting bacterial growth. Target of the bacterial type III effector E3-ligase protein hopAB2/avrPtoB of Pseudomonas syringae pv. tomato DC3000 that mediates ubiquitination and subsequent proteolysis, thus blocking all defense responses by suppressing PAMP-triggered immunity (PTI).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O22808|LYK5_ARATH Protein LYK5 OS=Arabidopsis thaliana GN=LYK5 PE=1 SV=1

 Score =  118 bits (296), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 182/377 (48%), Gaps = 55/377 (14%)

Query: 14  RRRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTSSVINSSSSLQTLK 73
           RR  + S PS     +    S+   S P+++T  +S       SN+S      S++++L 
Sbjct: 303 RRSKKKSLPSSLPEENKLFDSSTKQSIPTTTTTQWS----IDLSNSSEAFGLKSAIESLT 358

Query: 74  KSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQ 133
                   +Y  +++ +AT+NF  +     S    +R TI G D  +      + +  + 
Sbjct: 359 --------LYRFNDLQSATSNFSDENRIKGSV---YRATINGDDAAV------KVIKGDV 401

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFT------ 187
               ++++ + +HS++I+L G C+     YLV+E+    +++D L +    S T      
Sbjct: 402 SSSEINLLKKLNHSNIIRLSGFCIREGTSYLVFEYSENGSISDWLHSSGKKSLTWKQRVE 461

Query: 188 ----------VLSTWLS------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
                      L  +++       ++S++I++      +  AKI +FG A +  E  G+ 
Sbjct: 462 IARDVAEALDYLHNYITPPHIHKNLESTNILLD----SNFRAKIANFGVARILDE--GDL 515

Query: 232 SGKVNK-IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR 290
             ++ + +EGT+GY+APE+  +GV+T K DV+AFGV VLELLSG E +     +  +G  
Sbjct: 516 DLQLTRHVEGTQGYLAPEYVENGVITSKLDVFAFGVAVLELLSGREAV--TIHKKKEGEE 573

Query: 291 RVSVVDKASEAVAGGVG---GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
            V ++ K   +V GG      +++++D  L + YP+E+A  M  L   CV  D   RP +
Sbjct: 574 EVEMLCKVINSVLGGENVREKLKEFMDPSLGNEYPLELAYTMAQLAKSCVATDLNSRPSV 633

Query: 348 RQVTGLVSKMYLESKNW 364
            QV   +S +   S +W
Sbjct: 634 TQVLTTLSMIVSSSIDW 650

May recognize microbe-derived N-acetylglucosamine (NAG)-containing ligands.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9T058|Y4119_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g11900 OS=Arabidopsis thaliana GN=At4g11900 PE=2 SV=1

 Score =  108 bits (271), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 52/310 (16%)

Query: 78  ENPHIYHLSEICAATNNF-LAKKFTSSSASASWRGTI-RGKDVIIFQRKLRRSLDLEQLR 135
           EN    +L +I  ATN+F   KK         ++G +  G +V I +   + S  L + +
Sbjct: 520 ENMCYLNLHDIMVATNSFSRKKKLGEGGFGPVYKGKLPNGMEVAIKRLSKKSSQGLTEFK 579

Query: 136 ERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLST---- 191
             + +I +  H +L++LLG CV G+   L+YE++S  +L   L       F  L +    
Sbjct: 580 NEVVLIIKLQHKNLVRLLGYCVEGDEKLLIYEYMSNKSLDGLL-------FDSLKSRELD 632

Query: 192 WLSRMQ--------------------------SSSIIVSEENAGSLCAKICHFGTAELCG 225
           W +RM+                          +S+I++ +E    +  KI  FGTA + G
Sbjct: 633 WETRMKIVNGTTRGLQYLHEYSRLRIIHRDLKASNILLDDE----MNPKISDFGTARIFG 688

Query: 226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG 285
               ++S    +I GT GYM+PE+   GV+++K D+Y+FGV++LE++SG++  +FV ++ 
Sbjct: 689 CKQIDDS--TQRIVGTFGYMSPEYALGGVISEKSDIYSFGVLLLEIISGKKATRFVHND- 745

Query: 286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP 345
               ++ S++    E+     G     +D  +  SY +E A + + + L CV + P  RP
Sbjct: 746 ----QKHSLIAYEWESWCETKG--VSIIDEPMCCSYSLEEAMRCIHIALLCVQDHPKDRP 799

Query: 346 DMRQVTGLVS 355
            + Q+  ++S
Sbjct: 800 MISQIVYMLS 809

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|D7UPN3|CERK1_ORYSJ Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica GN=CERK1 PE=1 SV=1

 Score =  107 bits (267), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 135/309 (43%), Gaps = 68/309 (22%)

Query: 83  YHLSEICAATNNF-LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVI 141
           +   EI  AT  F +  K       + +   +RG+   I +  ++ +   ++    L V+
Sbjct: 305 FSYEEIFNATQGFSMEHKIGQGGFGSVYYAELRGEKTAIKKMGMQAT---QEFLAELKVL 361

Query: 142 CRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ---- 197
              HH +L++L+G CV  NC +LVYE +   NL+  L+      +  LS W +R+Q    
Sbjct: 362 THVHHLNLVRLIGYCVE-NCLFLVYEFIDNGNLSQHLQRT---GYAPLS-WATRVQIALD 416

Query: 198 ----------------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV 235
                                 S++I++ ++      AKI  FG A+L  EV        
Sbjct: 417 SARGLEYLHEHVVPVYVHRDIKSANILLDKD----FRAKIADFGLAKLT-EVGSMSQSLS 471

Query: 236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEV-------------LKFVF 282
            ++ GT GYM PE +  G V+ K DVYAFGVV+ ELLS ++              L F+F
Sbjct: 472 TRVAGTFGYMPPEAR-YGEVSPKVDVYAFGVVLYELLSAKQAIVRSSESVSESKGLVFLF 530

Query: 283 DEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPG 342
           +E +        +D+               +D  L+  YPV+ A K+  L   C  E+PG
Sbjct: 531 EEALSAPNPTEALDE--------------LIDPSLQGDYPVDSALKIASLAKSCTHEEPG 576

Query: 343 KRPDMRQVT 351
            RP MR V 
Sbjct: 577 MRPTMRSVV 585

Plays an essential role in detecting peptidoglycans (e.g. PGNs) and restricting bacterial growth. Recognizes microbe-derived N-acetylglucosamine (NAG)-containing ligands (By similarity). Lysin motif (LysM) receptor kinase required as a cell surface receptor for chitin elicitor (chitooligosaccharides) signaling leading to innate immunity in response to both biotic and abiotic stresses. Involved in the resistance to pathogenic fungi, probably by sensing microbe-associated molecular patterns (MAMP) and pathogen-associated molecular patterns (PAMP).

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64483|SIRK_ARATH Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1

 Score =  105 bits (261), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 150/331 (45%), Gaps = 52/331 (15%)

Query: 83  YHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVIC 142
           +  SE+   TNNF  +          + G I G+ V +       +   ++ R  + ++ 
Sbjct: 564 FKYSEVVNITNNF-ERVIGKGGFGKVYHGVINGEQVAVKVLSEESAQGYKEFRAEVDLLM 622

Query: 143 RSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSS--- 199
           R HH++L  L+G C   N   L+YE+++  NL D L   R  SF +  +W  R++ S   
Sbjct: 623 RVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKR--SFIL--SWEERLKISLDA 678

Query: 200 -----------------------SIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN 236
                                  +I+++E+    L AK+  FG   L    S   SG+++
Sbjct: 679 AQGLEYLHNGCKPPIVHRDVKPTNILLNEK----LQAKMADFG---LSRSFSVEGSGQIS 731

Query: 237 K-IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV 295
             + G+ GY+ PE+ ++  + +K DVY+ GVV+LE+++G+  +     E      +V + 
Sbjct: 732 TVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAIASSKTE------KVHIS 785

Query: 296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT---- 351
           D     +A   G +R  VD+RL++ Y V  A KM  + L C +    +RP M QV     
Sbjct: 786 DHVRSILAN--GDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELK 843

Query: 352 GLVSKMYLESKNWADKIGFPT-DFSVSMAPR 381
            +V  +  + +N+ D     T +    M PR
Sbjct: 844 QIVYGIVTDQENYDDSTKMLTVNLDTEMVPR 874

Involved in innate immune response of plants.

Arabidopsis thaliana (taxid: 3702)

>sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1

 Score =  105 bits (261), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 135/298 (45%), Gaps = 39/298 (13%)

Query: 83  YHLSEICAATNNF-LAKKFTSSSASASWRGTI-RGKDVIIFQRKLRRSLDLEQLRERLSV 140
           + L +I AAT+NF + +K       + ++G +  GK + + Q   +      +    + +
Sbjct: 666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGM 725

Query: 141 ICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR------------NPRNPSFTV 188
           I    H +L+KL G CV GN   LVYE++    L+  L             + R   F  
Sbjct: 726 ISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLG 785

Query: 189 LSTWLSRMQSSSII------VSEENA---GSLCAKICHFGTAELCGEVSGNESGKVN--- 236
           ++  L+ +   S I      +   N      L AKI  FG A+L      N+ G  +   
Sbjct: 786 IAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKL------NDDGNTHIST 839

Query: 237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVD 296
           +I GT GYMAPE+   G +T+K DVY+FGVV LE++SG+    F   E       V ++D
Sbjct: 840 RIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDF-----VYLLD 894

Query: 297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV 354
            A   V    G + + VD  L   Y  E A  M+ + L C +  P  RP M QV  L+
Sbjct: 895 WA--YVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLI 950

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY95|Y1155_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS=Arabidopsis thaliana GN=At1g61550 PE=2 SV=1

 Score =  103 bits (258), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 158/338 (46%), Gaps = 36/338 (10%)

Query: 42  SSSTLNFSSTNYYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNF-LAKKF 100
           +S+   F      HN+  S V    +    LK       + + +  I  ATNNF L  K 
Sbjct: 436 ASAAFGFWRYRLKHNAIVSKVSLQGAWRNDLKSEDVSGLYFFEMKTIEIATNNFSLVNKL 495

Query: 101 TSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG 159
                   ++G ++ GK++ + +         E+    + +I +  H +L+++LG C+ G
Sbjct: 496 GQGGFGPVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEILLISKLQHINLVRILGCCIEG 555

Query: 160 NCGYLVYEHVSGANLADCLRNPRN-------PSFTVLS------TWLSRMQSSSIIVSEE 206
               LVYE +   +L   + + R          F+++        +L R     II  + 
Sbjct: 556 EERLLVYEFMVNKSLDTFIFDSRKRVEIDWPKRFSIIQGIARGLLYLHRDSRLRIIHRDV 615

Query: 207 NAGSLC------AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCD 260
              ++        KI  FG A +       ++ +  +I GT GYM+PE+  +GV ++K D
Sbjct: 616 KVSNILLDDKMNPKISDFGLARMYEGTKYQDNTR--RIVGTLGYMSPEYAWTGVFSEKSD 673

Query: 261 VYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA--GGVGGVRKWVDRRLK 318
            Y+FGV++LE++SGE++ +F +D+      R +++  A E+    GGVG    ++D+   
Sbjct: 674 TYSFGVLLLEVISGEKISRFSYDK-----ERKNLLAYAWESWCENGGVG----FLDKDAT 724

Query: 319 DS-YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS 355
           DS +P EV  + V +GL CV   P  RP+  ++  +++
Sbjct: 725 DSCHPSEVG-RCVQIGLLCVQHQPADRPNTLELLSMLT 761

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O04567|Y1719_ARATH Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1

 Score =  103 bits (257), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 149/322 (46%), Gaps = 46/322 (14%)

Query: 85  LSEICAATNNFLAKKF-TSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICR 143
           L ++ AATNNF +     SS    S++  +     +  +R        +Q R  ++ +  
Sbjct: 291 LGDLMAATNNFSSGNIDVSSRTGVSYKADLPDGSALAVKRLSACGFGEKQFRSEMNKLGE 350

Query: 144 SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRN----------PRNPSFTVLST-- 191
             H +L+ LLG CV  +   LVY+H+    L   L N          P   +  V +   
Sbjct: 351 LRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKG 410

Query: 192 -----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEG 240
                      +L +  SS++I+ +++     A+I  +G A+L G    N+S   N   G
Sbjct: 411 LAWLHHGCQPPYLHQFISSNVILLDDD---FDARITDYGLAKLVGSRDSNDSSFNNGDLG 467

Query: 241 TRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE 300
             GY+APE+ ++ V + K DVY FG+V+LEL++G++ L  +   G++G++  S+VD  S+
Sbjct: 468 ELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVI--NGVEGFKG-SLVDWVSQ 524

Query: 301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE 360
            +  G G  +  +DR + D    E   + + +   CV   P +RP M QV       Y  
Sbjct: 525 YL--GTGRSKDAIDRSICDKGHDEEILQFLKIACSCVVSRPKERPTMIQV-------YES 575

Query: 361 SKNWADKIG-------FPTDFS 375
            KN ADK G       FP  F+
Sbjct: 576 LKNMADKHGVSEHYDEFPLVFN 597

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LK03|PERK2_ARATH Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana GN=PERK2 PE=2 SV=3

 Score =  102 bits (255), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 40/296 (13%)

Query: 83  YHLSEICAATNNF-LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSV 140
           ++  E+  ATN F  A           ++G +R GK+V + Q K   S    + +  + +
Sbjct: 342 FNYEELSRATNGFSEANLLGQGGFGYVFKGMLRNGKEVAVKQLKEGSSQGEREFQAEVGI 401

Query: 141 ICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ--- 197
           I R HH  L+ L+G C++     LVYE V    L   L     P+      W SR++   
Sbjct: 402 ISRVHHRHLVALVGYCIADAQRLLVYEFVPNNTLEFHLHGKGRPTME----WSSRLKIAV 457

Query: 198 -------------SSSIIVSEENAGSLC------AKICHFGTAELCGEVSGNESGKVNKI 238
                        +  II  +  A ++       AK+  FG A++  + + + S    ++
Sbjct: 458 GSAKGLSYLHENCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVS---TRV 514

Query: 239 EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE---EVLKFVFDEGIDGYRRVSVV 295
            GT GY+APE+ +SG +T+K DV++FGVV+LEL++G    +V     D  +  + R  ++
Sbjct: 515 MGTFGYLAPEYASSGKLTEKSDVFSFGVVLLELITGRRPIDVNNVHADNSLVDWAR-PLL 573

Query: 296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT 351
           ++ SE     +G     VD++L + Y  E   +MV     CV     +RP M QV 
Sbjct: 574 NQVSE-----LGNFEVVVDKKLNNEYDKEEMARMVACAAACVRSTAPRRPRMDQVA 624

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
255580199	419	Protein kinase APK1A, chloroplast precur	0.992	0.902	0.594	1e-124
224100771	410	predicted protein [Populus trichocarpa]	0.887	0.824	0.612	1e-123
224109798	393	predicted protein [Populus trichocarpa]	0.884	0.857	0.614	1e-122
224100769	423	predicted protein [Populus trichocarpa]	0.797	0.718	0.628	1e-115
225449008	417	PREDICTED: probable LRR receptor-like se	0.973	0.889	0.552	1e-114
449449348	430	PREDICTED: probable LRR receptor-like se	0.976	0.865	0.526	1e-110
356541936	428	PREDICTED: putative leucine-rich repeat	0.965	0.859	0.510	1e-102
147771947	469	hypothetical protein VITISV_006317 [Viti	0.952	0.773	0.479	1e-102
359478371	474	PREDICTED: receptor like protein kinase	0.952	0.765	0.479	1e-102
357443189	441	Cysteine-rich receptor-like protein kina	0.971	0.839	0.513	1e-100

>gi|255580199|ref|XP_002530930.1| Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis] gi|223529489|gb|EEF31445.1| Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/422 (59%), Positives = 308/422 (72%), Gaps = 44/422 (10%)

Query: 1   MCKSKRSTDMI---TPRRRCRS-SRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTN-YYH 55
           MC+SKRST +I   +P+    S + PS  +  SS S++   ++ PSSS+ + S TN +Y 
Sbjct: 1   MCRSKRSTSIIQSLSPKSHHSSFANPSSSTSLSSSSTNYPGNNYPSSSSCSSSYTNNHYK 60

Query: 56  NSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRG 115
           N++ SS  ++  SL++LK SLPENP+IY+ SEI  ATNNFL+K F+SSS++ SWR  IR 
Sbjct: 61  NTSKSSSFSNKPSLKSLKASLPENPNIYNFSEISKATNNFLSKPFSSSSSATSWRCHIRN 120

Query: 116 KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           K+V++ QRKLRR  ++L +L++RLS ICR+HHSSLIKLLGA  SG+  YLVYE++ GANL
Sbjct: 121 KEVVLVQRKLRRDPIELPELQQRLSTICRTHHSSLIKLLGASTSGSYVYLVYEYIHGANL 180

Query: 175 ADCLRNPRNPSFTVLSTWLSRMQ----------------------------SSSIIVSEE 206
           + CLRNP+NP++TVLS W+SRMQ                            SSS+IVSE+
Sbjct: 181 STCLRNPQNPNYTVLSNWVSRMQIATDIAHGLDYIHHCTDQDSVFVHNHIKSSSVIVSED 240

Query: 207 NAGSLCAKICHFGTAELCGEVSGNE-------SGKVNKIEGTRGYMAPEFQASGVVTQKC 259
              SL AKICHFGTAELCGE+   E       S K  KIEGTRGYMAPEFQASGVVTQK 
Sbjct: 241 ---SLNAKICHFGTAELCGEMEKLEAKSLTRSSSKGMKIEGTRGYMAPEFQASGVVTQKS 297

Query: 260 DVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKD 319
           DVYAFGVVVLEL+SGEE L++VFDEG  G+RRVSV++ A  AVA G  GVR WVDRRL+D
Sbjct: 298 DVYAFGVVVLELVSGEEALRYVFDEGSGGFRRVSVIEGAKNAVASGGSGVRSWVDRRLRD 357

Query: 320 SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVSMA 379
           SYPVEVAEKMVL+GL+CV+E P KRPDM QV   VSK+YLESKNWA+KIG P DFSVSMA
Sbjct: 358 SYPVEVAEKMVLVGLECVEEQPEKRPDMEQVATRVSKLYLESKNWAEKIGVPIDFSVSMA 417

Query: 380 PR 381
           PR
Sbjct: 418 PR 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100771|ref|XP_002312007.1| predicted protein [Populus trichocarpa] gi|222851827|gb|EEE89374.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/382 (61%), Positives = 283/382 (74%), Gaps = 44/382 (11%)

Query: 41  PSSSTLNFSSTNY---YHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLA 97
           PS+ST  + STNY   Y +++ S   +S +SL  LK SLPENPHIY  SEI  ATNNFL 
Sbjct: 32  PSTSTNKYPSTNYSPNYPSTSKSWSFSSKTSLSNLKDSLPENPHIYDFSEISKATNNFLQ 91

Query: 98  KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV 157
           K F+SSS+S SWR ++RGK++I+FQRK RR ++  +L++RL  ICRSHHSS+IKLLGA  
Sbjct: 92  KPFSSSSSSVSWRCSLRGKELILFQRKFRRQIESPELQQRLLAICRSHHSSVIKLLGATT 151

Query: 158 SGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ-------------------- 197
           SGN  YL YE+V GANLA CLRNP+NPS+TVLS+WLSRMQ                    
Sbjct: 152 SGNYIYLAYEYVHGANLATCLRNPQNPSYTVLSSWLSRMQIATDIANGLDYIHHCSGLNS 211

Query: 198 --------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE----------SGKVNKIE 239
                   S SI V+E+   SL AKICHFGTAELCGE+ G E          + KV KIE
Sbjct: 212 EFVHNHIKSLSISVTED---SLNAKICHFGTAELCGEIVGKEGSSSKNFGRSNSKVMKIE 268

Query: 240 GTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKAS 299
           GTRGYMAPEFQASG+ TQKCDVYAFGVV+LEL+SGEE L++VFDEG  GY+R+SV+++A 
Sbjct: 269 GTRGYMAPEFQASGLTTQKCDVYAFGVVILELVSGEEALRYVFDEGGGGYKRISVIERAR 328

Query: 300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL 359
           E +A G G +RKWVD+R+KDSYPVEVAEKM+LLGL+CVD+DP KRPDM  V G VS++YL
Sbjct: 329 EVMAVGGGELRKWVDKRMKDSYPVEVAEKMLLLGLECVDDDPEKRPDMGLVDGRVSRLYL 388

Query: 360 ESKNWADKIGFPTDFSVSMAPR 381
           ESKNWA+KIG PTDFSVS+APR
Sbjct: 389 ESKNWAEKIGLPTDFSVSLAPR 410

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109798|ref|XP_002315314.1| predicted protein [Populus trichocarpa] gi|222864354|gb|EEF01485.1| predicted protein [Populus trichocarpa]

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/381 (61%), Positives = 281/381 (73%), Gaps = 44/381 (11%)

Query: 42  SSSTLNFSSTNYYHNSNTSS---VINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAK 98
           +SS+ N+ STNY  N +T+S     ++ +SL +L+ SLPENPHIY  SEIC ATNNFL K
Sbjct: 16  TSSSHNYPSTNYTPNYSTTSKSWSFSNKTSLSSLRDSLPENPHIYDFSEICKATNNFLQK 75

Query: 99  KFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS 158
            F+SSS+S SWR +IRGK+VI+FQRK R  + L +L+ERL  ICRSHHSSL+KLLGA  S
Sbjct: 76  PFSSSSSSTSWRCSIRGKEVILFQRKSRHQIGLPELQERLLTICRSHHSSLVKLLGASTS 135

Query: 159 GNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ--------------------- 197
           GN  YLVYE+V GANLA CLRNP+NPS+TVLS+WLSRM+                     
Sbjct: 136 GNYIYLVYEYVHGANLATCLRNPQNPSYTVLSSWLSRMKVATDLAHGLDYIHHCLGLNSE 195

Query: 198 -------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE----------SGKVNKIEG 240
                  S SI+V+E+   SL AKICHFGTAELCGE+ GNE            +V KIEG
Sbjct: 196 YVHNHVKSYSILVTED---SLNAKICHFGTAELCGEIVGNERSSAKSFGRLDSRVMKIEG 252

Query: 241 TRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE 300
           TRGYMAPE Q+ G  TQK DVYAFGVV+LEL+SGEE L++VFDEG  GY+R+SV+++A E
Sbjct: 253 TRGYMAPESQSIGGKTQKGDVYAFGVVILELVSGEEALRYVFDEGGGGYKRISVIERARE 312

Query: 301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE 360
            VA G G +RKWVD+R+KDSYPVEVAEK+VLLGL+CVD+DP  RPDM QV   VSK+YLE
Sbjct: 313 VVAVGGGELRKWVDKRVKDSYPVEVAEKIVLLGLECVDDDPENRPDMGQVEVRVSKLYLE 372

Query: 361 SKNWADKIGFPTDFSVSMAPR 381
           SKNWA+KIG PTDFSVSMAPR
Sbjct: 373 SKNWAEKIGLPTDFSVSMAPR 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100769|ref|XP_002312006.1| predicted protein [Populus trichocarpa] gi|222851826|gb|EEE89373.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/345 (62%), Positives = 251/345 (72%), Gaps = 41/345 (11%)

Query: 75  SLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQL 134
           SLPENPHIY  SEIC  TNNFL K F+SSS+S SWR +IRGK+VIIFQRK RR + L +L
Sbjct: 82  SLPENPHIYDFSEICKTTNNFLKKPFSSSSSSTSWRCSIRGKEVIIFQRKFRRQIGLPEL 141

Query: 135 RERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLS 194
           R++L  ICRSHHSS+IKLLG    GN  YLVYE+V GANLA CLRNP+NPS+TVLS+WLS
Sbjct: 142 RKKLLTICRSHHSSVIKLLGVSSPGNSIYLVYEYVHGANLATCLRNPQNPSYTVLSSWLS 201

Query: 195 RMQ----------------------------SSSIIVSEENAGSLCAKICHFGTAELCGE 226
           RMQ                            SSSI+V+E+   SL AKICHFGTAELCGE
Sbjct: 202 RMQIATDIANGLDYILHCSGLNSEFVHGRIKSSSILVTED---SLNAKICHFGTAELCGE 258

Query: 227 VSGNES----------GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEE 276
           + GNES           +  K EGT GYMAPEFQASG VTQKCDVYAFGVV+LEL+SGEE
Sbjct: 259 MVGNESSLSKNFGRSDSREMKFEGTTGYMAPEFQASGFVTQKCDVYAFGVVILELVSGEE 318

Query: 277 VLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQC 336
            L++VFD+G   Y R+SV++ A E VA G G +RKWVD+RLKDSYPVEVAEKMVLLGL+C
Sbjct: 319 ALRYVFDKGGGVYERISVIEMAREVVAAGEGELRKWVDKRLKDSYPVEVAEKMVLLGLEC 378

Query: 337 VDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVSMAPR 381
           VD+DP KRP    +   VSK+YL+SK WA K G PTDFSVS+APR
Sbjct: 379 VDDDPEKRPHTGLIDVRVSKLYLKSKKWAKKFGLPTDFSVSLAPR 423

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449008|ref|XP_002271947.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Vitis vinifera]

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 236/427 (55%), Positives = 295/427 (69%), Gaps = 56/427 (13%)

Query: 1   MCKSKRSTDMITPR-RRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNT 59
           MCKSK S   + P     RS  P      SS+ +    SS  ++   NF+    Y+ S T
Sbjct: 1   MCKSKSSISAVEPSVNHGRSDTPR-----SSRVTRTSRSSSSATDRSNFNLPTNYNTSGT 55

Query: 60  S-SVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDV 118
           S S  ++ +SL  +++SLPENPH+Y +SEIC+AT NFLAKKF+SSS++  WR ++RGKDV
Sbjct: 56  SRSSESTPASLSCIRESLPENPHVYDISEICSATGNFLAKKFSSSSSA--WRCSVRGKDV 113

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           +IFQRKLRR ++  ++R+ LSVIC+SHH SLIKLLGA +SGN  YLVY++V GA+LADCL
Sbjct: 114 VIFQRKLRRPIETAEIRKLLSVICKSHHGSLIKLLGASISGNHIYLVYDYVDGASLADCL 173

Query: 179 RNPRNPSFTVLSTWLSRMQ----------------------------SSSIIVSEENAGS 210
           RNPRNP+FTVLS W+SRMQ                            SSSI+V  +   S
Sbjct: 174 RNPRNPNFTVLSNWVSRMQIAADLAHGLDYVHHCTGLDASFVHNRIRSSSILVIND---S 230

Query: 211 LCAKICHFGTAELCGEV---SGNESG---------KVNKIEGTRGYMAPEFQASGVVTQK 258
           L AKICHFGTA+LCGE+   +G  SG          V KIEGTRGYMAPEFQ +G+ T+K
Sbjct: 231 LNAKICHFGTAQLCGEIAEGTGKNSGSSQLKRSGSAVMKIEGTRGYMAPEFQLTGLATRK 290

Query: 259 CDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG----GVGGVRKWVD 314
            DVYAFGVV+LE+LSG E LK++ D+    Y+RVSV++ A EA+      G GGVR+WVD
Sbjct: 291 SDVYAFGVVILEILSGAEALKYIADDESGTYKRVSVIETAREAIEAEGGGGGGGVRRWVD 350

Query: 315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDF 374
            RLKDSYPVEVAEKMV LGL+CV+ DPGKRP+M +V   +SK+YLESKNWAD+IG PTDF
Sbjct: 351 SRLKDSYPVEVAEKMVRLGLECVEGDPGKRPNMSEVAARISKLYLESKNWADRIGMPTDF 410

Query: 375 SVSMAPR 381
           SVSMAPR
Sbjct: 411 SVSMAPR 417

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449348|ref|XP_004142427.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Cucumis sativus] gi|449513067|ref|XP_004164219.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Cucumis sativus]

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 231/439 (52%), Positives = 296/439 (67%), Gaps = 67/439 (15%)

Query: 1   MCKSKRSTDMITPRRRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTS 60
           MCK+K+STD+I P    RSSR  + S      +   SS    SS+LNF+S N       S
Sbjct: 1   MCKTKKSTDVIDPASP-RSSRHQRTS-----KTYASSSYADPSSSLNFTSYNITTTDTKS 54

Query: 61  SVINSSSSLQT-------LKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTI 113
           S   SS S  +       LK SLP+NP IY  SEI +ATNNFL+K F+SSS+S+SWR +I
Sbjct: 55  STKGSSKSSASSRASLASLKDSLPDNPLIYEFSEIRSATNNFLSKPFSSSSSSSSWRCSI 114

Query: 114 RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN 173
           RGKDVI+FQRKL R ++L +L+ +LSVICRSHH+SL+KLLGA +SGN  Y+VY+ ++GA+
Sbjct: 115 RGKDVIVFQRKLLRPIELLELKHQLSVICRSHHNSLVKLLGASISGNYIYMVYDFIAGAS 174

Query: 174 LADCLRNPRNPSFTVLSTWLSRMQ----------------------------SSSIIVSE 205
           LA+CLRNPRNP+FTVLSTW+SRMQ                            SSSI+++E
Sbjct: 175 LAECLRNPRNPNFTVLSTWISRMQIATDLAHGLDYVHHCSGLNCKFIHNHIKSSSIVITE 234

Query: 206 ENAGSLCAKICHFGTAELCGEVS----------------------GNESGKVNKIEGTRG 243
           E   +L AKICHFGTAELCGE++                         + K  K+EGTRG
Sbjct: 235 E---TLSAKICHFGTAELCGELAMAEEERDEEEGDELEITTYRRPKRSNSKKMKLEGTRG 291

Query: 244 YMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG-IDGYRRVSVVDKASEAV 302
           Y+APE  A+G ++QK DVYAFGVVVLEL+SG E LK++FDEG   GY RVSV++ A +A+
Sbjct: 292 YIAPEMMANGTMSQKIDVYAFGVVVLELISGNEALKYIFDEGNRGGYVRVSVIETARKAM 351

Query: 303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK 362
             G+GG+R WVDRRL+DS+PVEVAEKMV++GL+CV+EDP KRPDM +V G +SK++LES 
Sbjct: 352 ESGIGGIRTWVDRRLRDSFPVEVAEKMVIVGLECVEEDPDKRPDMGRVAGKISKLFLESS 411

Query: 363 NWADKIGFPTDFSVSMAPR 381
            WA+ IG   D SVS+APR
Sbjct: 412 RWAESIGKSVDMSVSLAPR 430

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541936|ref|XP_003539428.1| PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230-like [Glycine max]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/441 (51%), Positives = 280/441 (63%), Gaps = 73/441 (16%)

Query: 1   MCKSKRSTDMITPRR---------RCRSSRPSK--CSFNSSKSSSNDSSSDPSSSTLNFS 49
           MCK+K +T+  +P R         R  SSRPS    SF+ + S+S  S+S P S      
Sbjct: 1   MCKTKMATNAASPTRSQQQATQSPRTPSSRPSPRPTSFSDNPSTSYSSNSAPYSG----- 55

Query: 50  STNYYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASW 109
           ST Y  +S+T+  I+S SSL +L+ +LPENPHIY  SEICAATNNFLAK+ +SS+    W
Sbjct: 56  STGYRLSSDTT--ISSFSSLTSLRDTLPENPHIYDFSEICAATNNFLAKRHSSSTPC--W 111

Query: 110 RGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV 169
           R T+RG DVI+FQRK RR L   QL++ LSV+CRSHH S+IKLLGA VSG+  YLVY+ V
Sbjct: 112 RCTLRGADVIVFQRKFRRKLQTPQLQQLLSVVCRSHHVSIIKLLGASVSGDHIYLVYDFV 171

Query: 170 -SGANLADCLRNPRNPSFTVLSTWLSRMQ----------------------------SSS 200
            +GA L+DCLRN  N  FTVLSTW+SRMQ                            SSS
Sbjct: 172 NNGATLSDCLRNKNNVHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINFVHNHIKSSS 231

Query: 201 IIVSEENAGSLCAKICHFGTAELCGEV--SGNESGKVNKI--------------EGTRGY 244
           IIV+E    S  A++CHFG A+LCGE+     + G++++I              EG RGY
Sbjct: 232 IIVTEP---SFNARVCHFGAAQLCGEIELDNQKLGEISEIEEKLTSSPARSKQFEGVRGY 288

Query: 245 MAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG 304
           MAPEFQASGV TQK D+YAFGVV+LELLSGEE LKF FDE    + R SV+D A  AV  
Sbjct: 289 MAPEFQASGVATQKSDIYAFGVVMLELLSGEEPLKFKFDEKTRTFVRTSVIDAARAAVVD 348

Query: 305 GVGGV----RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE 360
           G G V    R+WVDRRLKDS+PV+VAEK   + L+CV  DP KRP+M +V G +SK YL 
Sbjct: 349 GEGSVEGKLRRWVDRRLKDSFPVDVAEKWTRVALECVHVDPDKRPNMGRVAGKISKFYLT 408

Query: 361 SKNWADKIGFPTDFSVSMAPR 381
           S+ W+D I  P D +VS+ PR
Sbjct: 409 SRIWSDSIKMP-DMTVSLGPR 428

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771947|emb|CAN66759.1| hypothetical protein VITISV_006317 [Vitis vinifera]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/440 (47%), Positives = 283/440 (64%), Gaps = 77/440 (17%)

Query: 12  TPR-RRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTSSVINSSSSLQ 70
           TPR ++    RPS  + ++S++S+++ SS P      +++ + Y  S +++ I+S +SL 
Sbjct: 37  TPRIQQITRPRPSTGTASTSEASTSNVSSVP------YATGSSYIGS-SATSISSRTSLS 89

Query: 71  TLKKSLPENPHIYHLSEICAATNNFLAKKFT-SSSASASWRGTIRGKDVIIFQRKLRRSL 129
           +L+ SLPENPHIY  SEI +ATNNFLAK+++ SSS++A WR T+RGKDVI+FQRK  R L
Sbjct: 90  SLRDSLPENPHIYDFSEISSATNNFLAKRYSPSSSSTACWRCTLRGKDVIVFQRKFWRRL 149

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL 189
           ++ QL++RLSVICRSHH S+ +LLGA +SG   YLVY+ V GANLA+ LRN RNP FTVL
Sbjct: 150 EMAQLKQRLSVICRSHHKSITRLLGASISGEHLYLVYDFVKGANLANILRNQRNPDFTVL 209

Query: 190 STWLSRMQ----------------------------SSSIIVSE---ENAGSLC-----A 213
           STW+SRMQ                            S+SI+++E    N  S+      A
Sbjct: 210 STWISRMQIAADLADGLDYIHNNTGLSISFVHNRIKSNSIVITEPIKSNRTSIAETLHNA 269

Query: 214 KICHFGTAELCGEVSGNE-----------------------------SGKVNKIEGTRGY 244
           KICHFGTA+LCGE   N+                             + +  + EG RGY
Sbjct: 270 KICHFGTAQLCGETDENQLQPQVSKYEGEIVEEESFSSTKSPELKRTNSRAMQFEGVRGY 329

Query: 245 MAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA- 303
           M+PEFQ++GV TQ+ DVYAFGVV+LELLSGEE LK+ FD+    +RR SV+D A  A+  
Sbjct: 330 MSPEFQSTGVATQQSDVYAFGVVILELLSGEEPLKYKFDKTTGEFRRTSVIDTARAAIDD 389

Query: 304 --GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES 361
             G  G +R+WVD+RLKDS+PVEVAEK+  L L CV  DP +RPDM  V+G +SK+ ++S
Sbjct: 390 TDGKDGRLRRWVDKRLKDSFPVEVAEKVTRLALDCVHVDPDQRPDMSHVSGKISKLLIQS 449

Query: 362 KNWADKIGFPTDFSVSMAPR 381
           KNW DK+  PTD SVS+APR
Sbjct: 450 KNWLDKLKVPTDISVSLAPR 469

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478371|ref|XP_002285314.2| PREDICTED: receptor like protein kinase S.2-like [Vitis vinifera]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/440 (47%), Positives = 283/440 (64%), Gaps = 77/440 (17%)

Query: 12  TPR-RRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTSSVINSSSSLQ 70
           TPR ++    RPS  + ++S++S+++ SS P      +++ + Y  S +++ I+S +SL 
Sbjct: 42  TPRIQQITRPRPSTGTASTSEASTSNVSSVP------YATGSSYIGS-SATSISSRTSLS 94

Query: 71  TLKKSLPENPHIYHLSEICAATNNFLAKKFT-SSSASASWRGTIRGKDVIIFQRKLRRSL 129
           +L+ SLPENPHIY  SEI +ATNNFLAK+++ SSS++A WR T+RGKDVI+FQRK  R L
Sbjct: 95  SLRDSLPENPHIYDFSEISSATNNFLAKRYSPSSSSTACWRCTLRGKDVIVFQRKFWRRL 154

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL 189
           ++ QL++RLSVICRSHH S+ +LLGA +SG   YLVY+ V GANLA+ LRN RNP FTVL
Sbjct: 155 EMAQLKQRLSVICRSHHKSITRLLGASISGEHLYLVYDFVKGANLANILRNQRNPDFTVL 214

Query: 190 STWLSRMQ----------------------------SSSIIVSE---ENAGSLC-----A 213
           STW+SRMQ                            S+SI+++E    N  S+      A
Sbjct: 215 STWISRMQIAADLADGLDYIHNNTGLSISFVHNRIKSNSIVITEPIKSNRTSIAETLHNA 274

Query: 214 KICHFGTAELCGEVSGNE-----------------------------SGKVNKIEGTRGY 244
           KICHFGTA+LCGE   N+                             + +  + EG RGY
Sbjct: 275 KICHFGTAQLCGETDENQLQPQVSKYEGEIVEEESFSSTKSPELKRTNSRAMQFEGVRGY 334

Query: 245 MAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA- 303
           M+PEFQ++GV TQ+ DVYAFGVV+LELLSGEE LK+ FD+    +RR SV+D A  A+  
Sbjct: 335 MSPEFQSTGVATQQSDVYAFGVVILELLSGEEPLKYKFDKTTGEFRRTSVIDTARAAIDD 394

Query: 304 --GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES 361
             G  G +R+WVD+RLKDS+PVEVAEK+  L L CV  DP +RPDM  V+G +SK+ ++S
Sbjct: 395 TDGKDGRLRRWVDKRLKDSFPVEVAEKVTRLALDCVHVDPDQRPDMSHVSGKISKLLIQS 454

Query: 362 KNWADKIGFPTDFSVSMAPR 381
           KNW DK+  PTD SVS+APR
Sbjct: 455 KNWLDKLKVPTDISVSLAPR 474

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357443189|ref|XP_003591872.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355480920|gb|AES62123.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/430 (51%), Positives = 284/430 (66%), Gaps = 60/430 (13%)

Query: 1   MCKSKRSTDMITPRRRCRSSRPSKCSFNSSKSSSNDSSSDPSSSTLNFSSTNYYHNSNTS 60
           MCKSK+ST ++ P  R   + P     +++ SSSN  SS  S   +  S +  Y+NS   
Sbjct: 23  MCKSKKSTTVVQPTTR---NNPHPQRTSTTSSSSNLPSSSTSEVPITESRSYIYNNSKQK 79

Query: 61  S---------VINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRG 111
                      I++ SSL +LK +LPENPHIY  S+I +ATNNF A + +S+S    +R 
Sbjct: 80  QWSKTSSSSSSISTHSSLSSLKHALPENPHIYPFSDISSATNNFSANRLSSNS----FRC 135

Query: 112 TIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG 171
           ++  +DV++FQRK RR + L +LR+RL++ICRSHHSSL+KLLGA VSG+  YLVY+ V G
Sbjct: 136 SLHNRDVVVFQRKFRRQIHLPELRDRLALICRSHHSSLVKLLGASVSGSYIYLVYDFVPG 195

Query: 172 ANLADCLRNPRNPSFTVLSTWLSRM----------------------------QSSSIIV 203
           ANL+DCLRN RNPSFT L+TW SRM                            +SSSIIV
Sbjct: 196 ANLSDCLRNRRNPSFTDLNTWTSRMLIASDLAHGLDYVHNFAGSGSGFVHNHIKSSSIIV 255

Query: 204 SEENAGSLCAKICHFGTAELCGE----VSGNESGKVNK--------IEGTRGYMAPEFQA 251
           +EEN G    KICHFGT+ELCGE     +G++SG+  K         EGTRGYMAPEF  
Sbjct: 256 AEENFG---VKICHFGTSELCGESVDDTAGSDSGRKLKKSGSKGVRFEGTRGYMAPEFLV 312

Query: 252 SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK 311
           +GV TQK DVYAFGVVVLE+LSGEE ++F  +    GY+RVSVV+ A EA     GGVRK
Sbjct: 313 TGVATQKTDVYAFGVVVLEILSGEEAVRFELEGNEGGYKRVSVVETAKEAWKEH-GGVRK 371

Query: 312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFP 371
           WVDRRLKDS+P++VAEKM+ +GL+CV +DP +RPDM +V+  VSK+YLESK W +K+G  
Sbjct: 372 WVDRRLKDSFPMDVAEKMIRVGLECVGDDPNERPDMGRVSMEVSKLYLESKEWEEKLGTN 431

Query: 372 TDFSVSMAPR 381
            DFSVS+APR
Sbjct: 432 IDFSVSLAPR 441

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
TAIR|locus:2080580	456	AT3G57120 [Arabidopsis thalian	0.317	0.265	0.593	5.9e-76
TAIR|locus:2089860	617	CERK1 "chitin elicitor recepto	0.737	0.455	0.288	9.4e-21
TAIR|locus:2195814	651	LYK3 "LysM-containing receptor	0.304	0.178	0.272	1.7e-20
TAIR|locus:2050987	664	LYK5 "LysM-containing receptor	0.388	0.222	0.294	4.2e-16
TAIR|locus:2137010	849	AT4G11900 [Arabidopsis thalian	0.385	0.173	0.268	1.9e-15
TAIR|locus:2027559	492	AT1G56720 [Arabidopsis thalian	0.391	0.302	0.292	2.3e-15
TAIR|locus:2077730	512	AT3G59110 [Arabidopsis thalian	0.296	0.220	0.314	3e-15
UNIPROTKB|D7UPN3	605	CERK1 "Chitin elicitor recepto	0.674	0.424	0.274	3.7e-14
UNIPROTKB|Q9ARH1	647	Q9ARH1 "Receptor protein kinas	0.666	0.392	0.263	3e-13
TAIR|locus:2012325	466	AT1G09440 [Arabidopsis thalian	0.162	0.133	0.362	5.7e-13

TAIR|locus:2080580 AT3G57120 [Arabidopsis thaliana (taxid:3702)]

 Score = 401 (146.2 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
 Identities = 79/133 (59%), Positives = 97/133 (72%)

Query:    77 PENPHIYHLSEICAATNNFLAKKFTXXXXXXXWRGTIRGKDVIIFQRKLRRSLDLEQLRE 136
             PENPHIY++SEI AATNNFLA + +       WR  +RGK+V++FQRK RR +D ++LR+
Sbjct:    98 PENPHIYNVSEIRAATNNFLANRLSSSSSKASWRCNLRGKEVVVFQRKFRRRIDTDELRD 157

Query:   137 RLSVICRSHHSSLIKLLGACVSGN--CG----------YLVYEHVSGANLADCLRNPRNP 184
             RLS ICRSHH S+I LLGA VSG    G          YLVYE+V+GA+LADCLRNP+NP
Sbjct:   158 RLSDICRSHHGSIINLLGASVSGGGRVGGGGGGGGDHIYLVYEYVNGASLADCLRNPKNP 217

Query:   185 SFTVLSTWLSRMQ 197
              FTVLS W SR+Q
Sbjct:   218 KFTVLSNWTSRIQ 230

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006944 "cellular membrane fusion" evidence=RCA

TAIR|locus:2089860 CERK1 "chitin elicitor receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 9.4e-21, P = 9.4e-21
 Identities = 92/319 (28%), Positives = 141/319 (44%)

Query:    83 YHLSEICAATNNF-LAKKFTXXXXXXXWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVI 141
             + L E+  AT+NF L+ K         +   +RG+   I +  +  S   +Q    L V+
Sbjct:   310 FSLEELAKATDNFNLSFKIGQGGFGAVYYAELRGEKAAIKKMDMEAS---KQFLAELKVL 366

Query:   142 CRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNP-RNP-SFT------------ 187
              R HH +L++L+G CV G+  +LVYE+V   NL   L    R P  +T            
Sbjct:   367 TRVHHVNLVRLIGYCVEGSL-FLVYEYVENGNLGQHLHGSGREPLPWTKRVQIALDSARG 425

Query:   188 -------VLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIE 239
                     +  ++ R ++S++I++ ++      AK+  FG  +L  EV G+ +       
Sbjct:   426 LEYIHEHTVPVYVHRDIKSANILIDQK----FRAKVADFGLTKLT-EVGGSAT---RGAM 477

Query:   240 GTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRRVSVVDKAS 299
             GT GYMAPE    G V+ K DVYAF                   E +  +R +  V + S
Sbjct:   478 GTFGYMAPE-TVYGEVSAKVDVYAFGVVLYELISAKGAV-VKMTEAVGEFRGLVGVFEES 535

Query:   300 EXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL 359
                       RK +D RL DSYP +   KM  LG  C  E+   RP MR +   +S ++ 
Sbjct:   536 FKETDKEEALRKIIDPRLGDSYPFDSVYKMAELGKACTQENAQLRPSMRYIVVALSTLFS 595

Query:   360 ESKNWADKIGFPTDFSVSM 378
              + NW D   F  +  VS+
Sbjct:   596 STGNW-DVGNFQNEDLVSL 613

GO:0005576 "extracellular region" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=IMP;IDA

GO:0032491 "detection of molecule of fungal origin" evidence=IEP;IMP

GO:0035556 "intracellular signal transduction" evidence=RCA;IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009817 "defense response to fungus, incompatible interaction" evidence=IMP

GO:0010200 "response to chitin" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0002752 "cell surface pattern recognition receptor signaling pathway" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IDA

GO:0008061 "chitin binding" evidence=IDA

GO:2001080 "chitosan binding" evidence=IDA

GO:0032499 "detection of peptidoglycan" evidence=IMP

GO:0045087 "innate immune response" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0071219 "cellular response to molecule of bacterial origin" evidence=IEP

GO:0071323 "cellular response to chitin" evidence=IEP

TAIR|locus:2195814 LYK3 "LysM-containing receptor-like kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 124 (48.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
 Identities = 33/121 (27%), Positives = 60/121 (49%)

Query:    78 ENPHIYHLSEICAATNNFLAKKFTXXXXXXX-WRGTIRGKDVIIFQRKLRRSLDLEQLRE 136
             E P ++   EI AAT+ F              + G +R ++V +   K   +   ++   
Sbjct:   324 EKPMVFTYEEIRAATDEFSDSNLLGHGNYGSVYFGLLREQEVAV---KRMTATKTKEFAA 380

Query:   137 RLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM 196
              + V+C+ HHS+L++L+G   + +  ++VYE+V    L   L +P++   T LS W+ R 
Sbjct:   381 EMKVLCKVHHSNLVELIGYAATVDELFVVYEYVRKGMLKSHLHDPQSKGNTPLS-WIMRN 439

Query:   197 Q 197
             Q
Sbjct:   440 Q 440

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016998 "cell wall macromolecule catabolic process" evidence=IEA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2050987 LYK5 "LysM-containing receptor-like kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
 Identities = 46/156 (29%), Positives = 72/156 (46%)

Query:   213 AKICHFGTAELCGEVSGNESGKVNK-IEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXX 271
             AKI +FG A +  E  G+   ++ + +EGT+GY+APE+  +GV+T K DV+AF       
Sbjct:   499 AKIANFGVARILDE--GDLDLQLTRHVEGTQGYLAPEYVENGVITSKLDVFAFGVAVLEL 556

Query:   272 XXXXXXXKFVFDEGIDGYRRVSVVDKASEXXXXXXXXXRK---WVDRRLKDSYPVEVAEK 328
                         +  +G   V ++ K             K   ++D  L + YP+E+A  
Sbjct:   557 LSGREAV--TIHKKKEGEEEVEMLCKVINSVLGGENVREKLKEFMDPSLGNEYPLELAYT 614

Query:   329 MVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNW 364
             M  L   CV  D   RP + QV   +S +   S +W
Sbjct:   615 MAQLAKSCVATDLNSRPSVTQVLTTLSMIVSSSIDW 650

GO:0005576 "extracellular region" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0008061 "chitin binding" evidence=IDA

GO:0071323 "cellular response to chitin" evidence=IEP

TAIR|locus:2137010 AT4G11900 [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
 Identities = 43/160 (26%), Positives = 80/160 (50%)

Query:   196 MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV 255
             +++S+I++ +E    +  KI  FGTA + G    ++S    +I GT GYM+PE+   GV+
Sbjct:   663 LKASNILLDDE----MNPKISDFGTARIFGCKQIDDS--TQRIVGTFGYMSPEYALGGVI 716

Query:   256 TQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRRVSVVDKASEXXXXXXXXXRKWVDR 315
             ++K D+Y+F              +FV ++     ++ S++  A E            +D 
Sbjct:   717 SEKSDIYSFGVLLLEIISGKKATRFVHND-----QKHSLI--AYEWESWCETKGVSIIDE 769

Query:   316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS 355
              +  SY +E A + + + L CV + P  RP + Q+  ++S
Sbjct:   770 PMCCSYSLEEAMRCIHIALLCVQDHPKDRPMISQIVYMLS 809

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2027559 AT1G56720 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 48/164 (29%), Positives = 80/164 (48%)

Query:   196 MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV 255
             ++SS+I++++E      AK+  FG A+L G     +S    ++ GT GY+APE+  SG++
Sbjct:   306 IKSSNILINDE----FNAKVSDFGLAKLLG---AGKSHVTTRVMGTFGYVAPEYANSGLL 358

Query:   256 TQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRRVSVVDKASEXXXXXXXXXRKWVDR 315
              +K DVY+F              +   D G   +  V++VD              + VD 
Sbjct:   359 NEKSDVYSFGVVLLEAITG----RDPVDYGRPAHE-VNLVDWLK--MMVGTRRSEEVVDP 411

Query:   316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV-SKMY 358
              ++   P    ++ +L  L+CVD D  KRP M QV  ++ S+ Y
Sbjct:   412 NIEVKPPTRSLKRALLTALRCVDPDSDKRPKMSQVVRMLESEEY 455

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2077730 AT3G59110 [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
 Identities = 38/121 (31%), Positives = 58/121 (47%)

Query:    81 HIYHLSEICAATNNFLAKKFTXXXXXXX-WRGT-IRGKDVIIFQRKLRRSLDLEQLRERL 138
             H + L ++  ATN F A+           ++G  I G DV +  +KL  +L   +   R+
Sbjct:   176 HWFTLRDLQLATNRFAAENVIGEGGYGVVYKGRLINGNDVAV--KKLLNNLGQAEKEFRV 233

Query:   139 SVICRSH--HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM 196
              V    H  H +L++LLG C+ G    LVYE+V+  NL   L        T+  TW +RM
Sbjct:   234 EVEAIGHVRHKNLVRLLGYCIEGVNRMLVYEYVNSGNLEQWLHGAMGKQSTL--TWEARM 291

Query:   197 Q 197
             +
Sbjct:   292 K 292

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|D7UPN3 CERK1 "Chitin elicitor receptor kinase 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 202 (76.2 bits), Expect = 3.7e-14, P = 3.7e-14
 Identities = 80/291 (27%), Positives = 124/291 (42%)

Query:    83 YHLSEICAATNNF-LAKKFTXXXXXXXWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVI 141
             +   EI  AT  F +  K         +   +RG+   I  +K+      E L E L V+
Sbjct:   305 FSYEEIFNATQGFSMEHKIGQGGFGSVYYAELRGEKTAI--KKMGMQATQEFLAE-LKVL 361

Query:   142 CRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRN----P--------------RN 183
                HH +L++L+G CV  NC +LVYE +   NL+  L+     P              R 
Sbjct:   362 THVHHLNLVRLIGYCVE-NCLFLVYEFIDNGNLSQHLQRTGYAPLSWATRVQIALDSARG 420

Query:   184 PSFT---VLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIE 239
               +    V+  ++ R ++S++I++ ++      AKI  FG A+L  EV         ++ 
Sbjct:   421 LEYLHEHVVPVYVHRDIKSANILLDKD----FRAKIADFGLAKLT-EVGSMSQSLSTRVA 475

Query:   240 GTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRRVSVVDKAS 299
             GT GYM PE +  G V+ K DVYAF                  +   +    V + ++A 
Sbjct:   476 GTFGYMPPEARY-GEVSPKVDVYAFGVVLYELLSAKQAIVRSSESVSESKGLVFLFEEAL 534

Query:   300 EXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                        + +D  L+  YPV+ A K+  L   C  E+PG RP MR V
Sbjct:   535 SAPNPTEALD-ELIDPSLQGDYPVDSALKIASLAKSCTHEEPGMRPTMRSV 584

GO:0005515 "protein binding" evidence=IPI

GO:0008061 "chitin binding" evidence=IDA

GO:0010200 "response to chitin" evidence=IDA

GO:0043621 "protein self-association" evidence=IDA

UNIPROTKB|Q9ARH1 Q9ARH1 "Receptor protein kinase PERK1" [Brassica napus (taxid:3708)]

 Score = 196 (74.1 bits), Expect = 3.0e-13, P = 3.0e-13
 Identities = 76/288 (26%), Positives = 121/288 (42%)

Query:    87 EICAATNNFL-AKKFTXXXXXXXWRGTI-RGKDVIIFQRKLRRSLDLEQLRERLSVICRS 144
             E+  ATN F  A            +G +  GK+V + Q K+       + +  + +I R 
Sbjct:   267 ELARATNGFSEANLLGQGGFGYVHKGVLPSGKEVAVKQLKVGSGQGEREFQAEVEIISRV 326

Query:   145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSF---TVLSTWLSRMQSSS- 200
             HH  L+ L+G C++G    LVYE V   NL   L     P+    T L   L   +  S 
Sbjct:   327 HHRHLVSLVGYCIAGAKRLLVYEFVPNNNLELHLHGEGRPTMEWSTRLKIALGSAKGLSY 386

Query:   201 --------IIVSEENAGSLC------AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMA 246
                     II  +  A ++       AK+  FG A++  + + + S    ++ GT GY+A
Sbjct:   387 LHEDCNPKIIHRDIKASNILIDFKFEAKVADFGLAKIASDTNTHVS---TRVMGTFGYLA 443

Query:   247 PEFQASGVVTQKCDVYAFXXXXXXXXXXX----XXXKFVFDEGIDGYRRVSVVDKASEXX 302
             PE+ ASG +T+K DV++F                   +V D  +D  R   ++++ASE  
Sbjct:   444 PEYAASGKLTEKSDVFSFGVVLLELITGRRPVDANNVYVDDSLVDWAR--PLLNRASEQG 501

Query:   303 XXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                        D ++ + Y  E   +MV     CV     +RP M Q+
Sbjct:   502 DFEGLA-----DAKMNNGYDREEMARMVACAAACVRHSARRRPRMSQI 544

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005887 "integral to plasma membrane" evidence=IDA

TAIR|locus:2012325 AT1G09440 [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
 Identities = 25/69 (36%), Positives = 43/69 (62%)

Query:   196 MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV 255
             ++SS+I++ +       AKI  FG A+L G+    +S    ++ GT GY+APE+  +G++
Sbjct:   284 IKSSNILIDDR----FNAKISDFGLAKLLGD---GKSHVTTRVMGTFGYVAPEYANTGLL 336

Query:   256 TQKCDVYAF 264
              +K DVY+F
Sbjct:   337 NEKSDVYSF 345

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	381
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-18
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-16
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	5e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-14
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-11
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-10
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-08
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	5e-08
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-07
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	3e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-07
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-07
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	7e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-07
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-06
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-06
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-06
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-06
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-06
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	7e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-05
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	5e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	7e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-04
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-04
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	6e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	6e-04
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-04
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	8e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	8e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	9e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	9e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.001
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.001
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.001
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.002
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	0.002
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	0.002
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.002
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.002
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 81.1 bits (201), Expect = 6e-18
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 23/183 (12%)

Query: 115 GKDVII-FQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN 173
           GK V I   +K   S  LE+L   + ++ + +H +++KL G     N  YLV E+  G +
Sbjct: 18  GKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGS 77

Query: 174 LADCLRNPRNPSFTVLSTW---------LSRMQSSSII---VSEEN----AGSLCAKICH 217
           L D L+       +              L  + S+ II   +  EN    + +   K+  
Sbjct: 78  LKDLLKENEGK-LSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLAD 136

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGEE 276
           FG ++L           V    GT  YMAPE     G  ++K D+++ GV++ EL   ++
Sbjct: 137 FGLSKLLTSDKSLLKTIV----GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYELPELKD 192

Query: 277 VLK 279
           +++
Sbjct: 193 LIR 195

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 59/268 (22%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQ----LRERLSVICRSHHSSLIKLLGACVSGNCGYL 164
            +G   GK+V +  + L+     +Q    LRE   ++ +  H +++KLLG C       +
Sbjct: 20  LKGKGDGKEVEVAVKTLKEDASEQQIEEFLRE-ARIMRKLDHPNIVKLLGVCTEEEPLMI 78

Query: 165 VYEHVSGANLADCLRNPRNPSFTV--LSTW----------LSRMQ-------SSSIIVSE 205
           V E++ G +L D LR  R    ++  L ++          L           + + +V E
Sbjct: 79  VMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE 138

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG---YMAPEFQASGVVTQKCDVY 262
                   KI  FG   L  ++         K++G +    +MAPE    G  T K DV+
Sbjct: 139 NL----VVKISDFG---LSRDL---YDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVW 188

Query: 263 AFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYP 322
           +FGV++ E+ +  E            Y  +S  +            V +++ +  +   P
Sbjct: 189 SFGVLLWEIFTLGEEP----------YPGMSNAE------------VLEYLKKGYRLPKP 226

Query: 323 VEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                ++  L LQC  EDP  RP   ++
Sbjct: 227 PNCPPELYKLMLQCWAEDPEDRPTFSEL 254

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 73.7 bits (182), Expect = 5e-15
 Identities = 61/273 (22%), Positives = 106/273 (38%), Gaps = 66/273 (24%)

Query: 109 WRGTIRGK------DVIIFQRKLRRSLDLEQ----LRERLSVICRSHHSSLIKLLGACVS 158
           ++G ++GK      +V +  + L+     +Q    LRE   ++ +  H +++KLLG C  
Sbjct: 16  YKGKLKGKGGKKKVEVAV--KTLKEDASEQQIEEFLRE-ARIMRKLDHPNVVKLLGVCTE 72

Query: 159 GNCGYLVYEHVSGANLADCLRNPRN--PSFTVLS---------TWLSRMQ-------SSS 200
               Y+V E++ G +L   LR  R       +LS          +L           + +
Sbjct: 73  EEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARN 132

Query: 201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG---YMAPEFQASGVVTQ 257
            +V E        KI  FG   L  ++         +  G +    +MAPE    G  T 
Sbjct: 133 CLVGENL----VVKISDFG---LSRDL---YDDDYYRKRGGKLPIRWMAPESLKEGKFTS 182

Query: 258 KCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL 317
           K DV++FGV++ E+ +  E            Y  +S  +            V +++    
Sbjct: 183 KSDVWSFGVLLWEIFTLGEQP----------YPGMSNEE------------VLEYLKNGY 220

Query: 318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
           +   P     ++  L LQC  EDP  RP   ++
Sbjct: 221 RLPQPPNCPPELYDLMLQCWAEDPEDRPTFSEL 253

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 71.8 bits (177), Expect = 3e-14
 Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 32/173 (18%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR 182
           +K +   D E++   + ++ +  H ++++L       +  YLV E+  G +L D L+  +
Sbjct: 33  KKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLK--K 90

Query: 183 NPSFT----------VLSTWLSRMQSSSII----------VSEENAGSLCAKICHFGTAE 222
               +          +LS  L  + S  I+          + E+       K+  FG A 
Sbjct: 91  RGRLSEDEARFYLRQILSA-LEYLHSKGIVHRDLKPENILLDEDG----HVKLADFGLAR 145

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                  +   K+    GT  YMAPE        +  D+++ GV++ ELL+G+
Sbjct: 146 QL-----DPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 71.4 bits (176), Expect = 4e-14
 Identities = 67/285 (23%), Positives = 110/285 (38%), Gaps = 89/285 (31%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSLDLEQ----LRERLSVICRSHHSSLIKLLGACVSGNCG 162
            + +G   G +  +  + L+     E+    L E  S++ +  H ++++LLG C  G   
Sbjct: 18  GTLKGDGEGTETKVAVKTLKEGASEEEREEFLEE-ASIMKKLSHPNIVRLLGVCTQGEPL 76

Query: 163 YLVYEHVSGANLADCLRNPRNPSFTVLST-WLSRM--QSSS------------------- 200
           Y+V E++ G +L D LR         L+   L +M  Q +                    
Sbjct: 77  YIVTEYMPGGDLLDFLRKHGEK----LTLKDLLQMALQIAKGMEYLESKNFVHRDLAARN 132

Query: 201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG---YMAPEFQASGVVTQ 257
            +V+E        KI  FG   L  ++  ++  +  K  G +    +MAPE    G  T 
Sbjct: 133 CLVTENL----VVKISDFG---LSRDIYEDDYYR--KRGGGKLPIKWMAPESLKDGKFTS 183

Query: 258 KCDVYAFGVVVLELLSG----------EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG 307
           K DV++FGV++ E+ +           EEVL+ +     DGY                  
Sbjct: 184 KSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELL----EDGY------------------ 221

Query: 308 GVRKWVDRRLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                   RL   ++ P E+ E M    LQC   DP  RP   ++
Sbjct: 222 --------RLPRPENCPDELYELM----LQCWAYDPEDRPTFSEL 254

Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 70.9 bits (174), Expect = 6e-14
 Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 59/264 (22%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
             G  RG+ V +   K   S   +      SV+    H +L++LLG  + GN  Y+V E+
Sbjct: 23  MLGDYRGQKVAVKCLK-DDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81

Query: 169 VSGANLADCLRNPRNPSFTVLSTWL-------SRMQ-------------SSSIIVSEENA 208
           ++  +L D LR+ R  +   L+  L         M+             + +++VSE+  
Sbjct: 82  MAKGSLVDYLRS-RGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL- 139

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV 268
               AK+  FG A+      G +SGK+  ++ T    APE       + K DV++FG+++
Sbjct: 140 ---VAKVSDFGLAK--EASQGQDSGKL-PVKWT----APEALREKKFSTKSDVWSFGILL 189

Query: 269 LELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK--DSYPVEVA 326
            E          ++  G   Y R+ + D     V  G          R++  +  P EV 
Sbjct: 190 WE----------IYSFGRVPYPRIPLKD-VVPHVEKGY---------RMEAPEGCPPEVY 229

Query: 327 EKMVLLGLQCVDEDPGKRPDMRQV 350
           + M      C + DP KRP  +Q+
Sbjct: 230 KVM----KDCWELDPAKRPTFKQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 32/190 (16%)

Query: 107 ASWRGTIRGKDV---IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGY 163
           A  +GT  GK V   I+ +R  +   D    RE + ++ R  H ++++L+ A    +  Y
Sbjct: 18  AKHKGT--GKIVAVKILKKRSEKSKKDQTARRE-IRILRRLSHPNIVRLIDAFEDKDHLY 74

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM-----------------QSSSIIVSEE 206
           LV E+  G +L D L      S         ++                 +  +I++ E 
Sbjct: 75  LVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDEN 134

Query: 207 NAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFG 265
                  KI  FG A+   + S + +  V    GT  YMAPE          K DV++ G
Sbjct: 135 GV----VKIADFGLAKKLLKSSSSLTTFV----GTPWYMAPEVLLGGNGYGPKVDVWSLG 186

Query: 266 VVVLELLSGE 275
           V++ ELL+G+
Sbjct: 187 VILYELLTGK 196

Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 70/294 (23%), Positives = 112/294 (38%), Gaps = 100/294 (34%)

Query: 109 WRGTIRGK-----DVIIFQRKLRRSLDLEQ----LRERLSVICRSHHSSLIKLLGACVSG 159
           ++G ++GK     +V +  + L+     E+    L+E   V+ +  H ++++LLG C   
Sbjct: 12  YKGKLKGKDGKTTEVAV--KTLKEDASEEERKDFLKE-ARVMKKLGHPNVVRLLGVCTEE 68

Query: 160 NCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ----------------SSSII- 202
              YLV E++ G +L D LR  R    +   + LS                   S   + 
Sbjct: 69  EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVH 128

Query: 203 ---------VSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG-----YMAPE 248
                    V E+       KI  FG   L  +V  ++  +    + T G     +MAPE
Sbjct: 129 RDLAARNCLVGEDL----VVKISDFG---LSRDVYDDDYYR----KKTGGKLPIRWMAPE 177

Query: 249 FQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYRRVSVVDKA 298
               G+ T K DV++FGV++ E+          LS EEVL+++      GYR        
Sbjct: 178 SLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL----RKGYR-------- 225

Query: 299 SEAVAGGVGGVRKWVDRRLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                             L   +  P E+ E M    L C   DP  RP   ++
Sbjct: 226 ------------------LPKPEYCPDELYELM----LSCWQLDPEDRPTFSEL 257

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 62.6 bits (152), Expect = 1e-10
 Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 48/223 (21%)

Query: 146 HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSE 205
           H +++KL+G C S    YL++E++ G NL++ LRN        LS W  R + +  I   
Sbjct: 742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN--------LS-WERRRKIAIGIAK- 791

Query: 206 ENAGSLCAKICHFGTAELCGEVS-------GNESGKV-----------NKIEGTRGYMAP 247
               +L    C    A + G +S       G +   +            K   +  Y+AP
Sbjct: 792 ----ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAP 847

Query: 248 EFQASGVVTQKCDVYAFGVVVLELLSGEEV--LKFVFDEGIDGYRRVSVVDKASEAVAGG 305
           E + +  +T+K D+Y FG++++ELL+G+     +F     I  + R    D         
Sbjct: 848 ETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSD--------- 898

Query: 306 VGGVRKWVDRRLKDSYPV---EVAEKMVLLGLQCVDEDPGKRP 345
              +  W+D  ++    V   E+ E M  L L C   DP  RP
Sbjct: 899 -CHLDMWIDPSIRGDVSVNQNEIVEVMN-LALHCTATDPTARP 939

Length = 968

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 58.7 bits (143), Expect = 7e-10
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 21/163 (12%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHVSGANLADCLRNPRNPSF- 186
           +LE L   + ++    H ++++  G+      N   +  E+VSG +L+  L+  +     
Sbjct: 42  ELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLK--KFGKLP 99

Query: 187 -TVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCGEVSGNES 232
             V+  +       L+ + S+ I+   +   N         K+  FG A+  G++   E 
Sbjct: 100 EPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG 159

Query: 233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                + GT  +MAPE        +  D+++ G  V+E+ +G+
Sbjct: 160 TG--SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.4 bits (129), Expect = 4e-08
 Identities = 51/256 (19%), Positives = 89/256 (34%), Gaps = 38/256 (14%)

Query: 116 KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA 175
           K +    +++ R L   Q+   L+     H  +++KL          YLV E+V G +L 
Sbjct: 32  KKLESKSKEVERFLREIQILASLN-----HPPNIVKLYDFFQDEGSLYLVMEYVDGGSLE 86

Query: 176 DCLRNPRNPSFTVLSTW----------LSRMQSSSII---VSEEN----AGSLCAKICHF 218
           D L+          S            L  + S  II   +  EN          K+  F
Sbjct: 87  DLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDF 146

Query: 219 GTAEL--CGEVSGNESGKVNKIEGTRGYMAPE---FQASGVVTQKCDVYAFGVVVLELLS 273
           G A+L      + +     +   GT GYMAPE     +    +   D+++ G+ + ELL+
Sbjct: 147 GLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLT 206

Query: 274 GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG 333
           G     F  ++      +   +                 +   L  S P  +++    L 
Sbjct: 207 GL--PPFEGEKNSSATSQTLKIILE---------LPTPSLASPLSPSNPELISKAASDLL 255

Query: 334 LQCVDEDPGKRPDMRQ 349
            + + +DP  R     
Sbjct: 256 KKLLAKDPKNRLSSSS 271

Length = 384

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 54.9 bits (132), Expect = 5e-08
 Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 34/186 (18%)

Query: 124 KLRRSLDLEQLRER------LSVICRSHHSSLIKLLGACVSGNCG----YLVYEHVSGAN 173
           KL R+   E+  +R       ++  R +H +++ LL    SG       + V+E+V G  
Sbjct: 9   KLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLD---SGEAPPGLLFAVFEYVPGRT 65

Query: 174 LADCLRN--PRNPSFTV---------LSTWLSR------MQSSSIIVSEENAGSLCAKIC 216
           L + L          T          L+   ++      ++  +I+VS+       AK+ 
Sbjct: 66  LREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRP-HAKVL 124

Query: 217 HFGTAEL---CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
            FG   L     +       +  ++ GT  Y APE      VT   D+YA+G++ LE L+
Sbjct: 125 DFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLT 184

Query: 274 GEEVLK 279
           G+ V++
Sbjct: 185 GQRVVQ 190

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 46/204 (22%)

Query: 123 RKLRRSLDLEQLRERLS---VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR 179
           + LR+    ++ +E L    ++   +H +++KLLG C+     Y++ E + G +L   LR
Sbjct: 32  KTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLR 91

Query: 180 NPRNPSF-TVLST----------------WLSRMQ-------SSSIIVSEENAGSLCAKI 215
           + R   F   L T                +L +M        + + +VSE+  G    ++
Sbjct: 92  DARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEK--GYDADRV 149

Query: 216 CHFGTAELCGEVSGNESGKVNKIEGTR----GYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
              G   L  ++  ++  +    EG       +MAPE    G  T + DV++FGV++ E+
Sbjct: 150 VKIGDFGLARDIYKSDYYRK---EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEI 206

Query: 272 L----------SGEEVLKFVFDEG 285
           L          + +EVL+ V   G
Sbjct: 207 LTLGQQPYPALNNQEVLQHVTAGG 230

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 53/235 (22%)

Query: 136 ERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRN--------PRNPSFT 187
           E  +V+ + HH +L++LLG  +  N  Y+V E +S  NL + LR          +   F+
Sbjct: 48  EETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFS 106

Query: 188 V-LSTWLSRMQSS----------SIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN 236
           + ++  +  ++S           +I+VSE+      AK+  FG A +     G ++ K+ 
Sbjct: 107 LDVAEGMEYLESKKLVHRDLAARNILVSEDGV----AKVSDFGLARV--GSMGVDNSKL- 159

Query: 237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVD 296
                  + APE       + K DV+++GV++ E          VF  G   Y ++S + 
Sbjct: 160 ----PVKWTAPEALKHKKFSSKSDVWSYGVLLWE----------VFSYGRAPYPKMS-LK 204

Query: 297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT 351
           +  E V  G          R++   P      + +L   C + +P KRP   ++ 
Sbjct: 205 EVKECVEKGY---------RMEP--PEGCPADVYVLMTSCWETEPKKRPSFHKLR 248

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 64/265 (24%)

Query: 109 WRGTIRGK-DVIIFQRKLRRSLDLEQLRERL----SVICRSHHSSLIKLLGACVSGNCGY 163
           ++G ++G  +V +   K  RS     L+ +      ++ +  H +++KL+G CV     Y
Sbjct: 12  YKGVLKGNTEVAV---KTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIY 68

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLSR--------MQSSSII----------VSE 205
           +V E V G +L   LR  +N         +S         ++S + I          V E
Sbjct: 69  IVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE 128

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG-----YMAPEFQASGVVTQKCD 260
            N      KI  FG       +S  E G +  +          + APE    G  T + D
Sbjct: 129 NNV----LKISDFG-------MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESD 177

Query: 261 VYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDS 320
           V+++G+++ E           F  G   Y  +S      +         R+ ++   +  
Sbjct: 178 VWSYGILLWE----------TFSLGDTPYPGMS----NQQT--------RERIESGYRMP 215

Query: 321 YPVEVAEKMVLLGLQCVDEDPGKRP 345
            P    E++  L LQC   DP  RP
Sbjct: 216 APQLCPEEIYRLMLQCWAYDPENRP 240

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 64/272 (23%), Positives = 107/272 (39%), Gaps = 80/272 (29%)

Query: 107 ASWRGTIRGKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV 165
            +W GT +   V +  + L+  ++  E   +   ++ +  H  L++L   C      Y+V
Sbjct: 25  GTWNGTTK---VAV--KTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIV 79

Query: 166 YEHVSGANLADCLRNP-----RNPSFTVLST-------WLSRMQ-------SSSIIVSEE 206
            E++S  +L D L++      R P    ++        +L           + +I+V E 
Sbjct: 80  TEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE- 138

Query: 207 NAGSLCAKICHFGTAELC--GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
              +L  KI  FG A L    E +  E  K   I+ T    APE    G  T K DV++F
Sbjct: 139 ---NLVCKIADFGLARLIEDDEYTAREGAKF-PIKWT----APEAANYGRFTIKSDVWSF 190

Query: 265 GVVVLEL----------LSGEEVLKFVFDEGID-GYRRVSVVDKASEAVAGGVGGVRKWV 313
           G+++ E+          ++  EVL     E ++ GYR     +                 
Sbjct: 191 GILLTEIVTYGRVPYPGMTNREVL-----EQVERGYRMPRPPN----------------- 228

Query: 314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP 345
                   P E+ + M    LQC D+DP +RP
Sbjct: 229 -------CPEELYDLM----LQCWDKDPEERP 249

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 51.0 bits (123), Expect = 3e-07
 Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 33/173 (19%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTW- 192
             E+  +   + H  +IKL          Y V E+     L   +R  +  S     T  
Sbjct: 49  KIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIR--KYGSLDEKCTRF 106

Query: 193 --------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCGEVSGNESGKVNKI 238
                   L  + S  II   +  EN      +  KI  FGTA++    S  ES K +  
Sbjct: 107 YAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDAT 166

Query: 239 E----------------GTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                            GT  Y++PE        +  D++A G ++ ++L+G+
Sbjct: 167 NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 27/198 (13%)

Query: 95  FLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLG 154
            L KK  +      W GT  G   +  +     ++  E   E   ++ +  H  L++L  
Sbjct: 9   QLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLY- 67

Query: 155 ACVSGNCGYLVYEHVSGANLADCL-----RNPRNPSFTVLST-------WLSRM------ 196
           A VS    Y+V E++S  +L D L     R  + P+   ++        ++ RM      
Sbjct: 68  AVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 127

Query: 197 -QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV 255
            +S++I+V +   G +C KI  FG A L   +  NE       +    + APE    G  
Sbjct: 128 LRSANILVGD---GLVC-KIADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRF 180

Query: 256 TQKCDVYAFGVVVLELLS 273
           T K DV++FG+++ EL++
Sbjct: 181 TIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 50.7 bits (122), Expect = 4e-07
 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 29/180 (16%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           GK+V I   KL      E++   + ++ +  H +++K  G+ +  +  ++V E  SG +L
Sbjct: 25  GKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL 84

Query: 175 ADCLRNPRNPSFT----------VLS--TWLSRMQ-------SSSIIVSEENAGSLCAKI 215
            D L++  N + T          +L    +L           +++I+++ +  G +  K+
Sbjct: 85  KDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD--GEV--KL 139

Query: 216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
             FG   L  ++S  ++   N + GT  +MAPE         K D+++ G+  +EL  G+
Sbjct: 140 IDFG---LSAQLS--DTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 38/170 (22%), Positives = 82/170 (48%), Gaps = 10/170 (5%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           GK V + +  LR+    E L   + ++    H +++++  + + G+  ++V E + G  L
Sbjct: 45  GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104

Query: 175 ADCLRNPRNPSFTVLSTWLSRMQSSSII----VSEENAGSLCAKICHFGTAEL-----CG 225
            D + + R     + +  L+ +++ S++    V   +  S    + H G  +L     C 
Sbjct: 105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164

Query: 226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
           +VS  E  +   + GT  +MAPE  +      + D+++ G++V+E++ GE
Sbjct: 165 QVS-KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 50.0 bits (120), Expect = 6e-07
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 22/175 (12%)

Query: 118 VIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADC 177
            I  Q    +++  +++ + + V+    H +L+K  G  V     Y+  E+ SG  L + 
Sbjct: 32  EIRIQDNDPKTI--KEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEEL 89

Query: 178 LRNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN-----AGSLCAKICHFGTAE 222
           L + R     V+  +       L+ + S  I+   +   N      G +  K+  FG A 
Sbjct: 90  LEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVI--KLGDFGCAV 147

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQK---CDVYAFGVVVLELLSG 274
                +     +V  + GT  YMAPE    G         D+++ G VVLE+ +G
Sbjct: 148 KLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATG 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 50.2 bits (120), Expect = 6e-07
 Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 57/256 (22%)

Query: 127 RSLDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRN 183
            S + E L   L ++  SH   H +++ LLGAC  G    ++ E+    +L + LR  R 
Sbjct: 78  HSSEREALMSELKIM--SHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE 135

Query: 184 PSFTVLSTW------------LSRMQSSSII---VSEENA----GSLCAKICHFGTAELC 224
              + L+              ++ + S + I   ++  N     G +  KIC FG A   
Sbjct: 136 ---SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKI-VKICDFGLAR-- 189

Query: 225 GEVSGNESGKVNKIEGTR---GYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFV 281
            ++  N+S  V K    R    +MAPE   + V T + DV+++G+++ E+          
Sbjct: 190 -DIM-NDSNYVVK-GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI---------- 236

Query: 282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP 341
           F  G + Y  + V  K             K +    + + P     ++  +   C D DP
Sbjct: 237 FSLGSNPYPGMPVDSK-----------FYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADP 285

Query: 342 GKRPDMRQVTGLVSKM 357
            KRP  +Q+  L+ K 
Sbjct: 286 LKRPTFKQIVQLIGKQ 301

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 49.7 bits (118), Expect = 7e-07
 Identities = 61/269 (22%), Positives = 106/269 (39%), Gaps = 49/269 (18%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
           W GT  G   +  +     ++  E   +   V+ +  H  L++L  A VS    Y+V E+
Sbjct: 23  WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEY 81

Query: 169 VSGANLADCLRNP-----RNPSFTVLST-------WLSRM-------QSSSIIVSEENAG 209
           +S  +L D L+       R P    ++        ++ RM       ++++I+V E    
Sbjct: 82  MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE---- 137

Query: 210 SLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVL 269
           +L  K+  FG A L   +  NE       +    + APE    G  T K DV++FG+++ 
Sbjct: 138 NLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194

Query: 270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKM 329
           EL +   V          G     V+D+               V+R  +   P E  E +
Sbjct: 195 ELTTKGRV-------PYPGMVNREVLDQ---------------VERGYRMPCPPECPESL 232

Query: 330 VLLGLQCVDEDPGKRPDMRQVTGLVSKMY 358
             L  QC  ++P +RP    +   +   +
Sbjct: 233 HDLMCQCWRKEPEERPTFEYLQAFLEDYF 261

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 41/184 (22%)

Query: 119 IIFQRKL-RRSLDLE---QLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
            I   K  R  ++     Q+   L ++ + +   ++   GA  +     +  E++ G +L
Sbjct: 27  KIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL 86

Query: 175 ADCLRNPRNP---------SFTVLS--TWLSR--------MQSSSIIVSEENAGSLCAKI 215
              L+  +           +  VL   T+L          ++ S+I+V+    G +  K+
Sbjct: 87  DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR--GQI--KL 142

Query: 216 CHFGTAELCGEVSGNESGKVNKIE----GTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
           C FG       VSG     VN +     GT  YMAPE       + K D+++ G+ ++EL
Sbjct: 143 CDFG-------VSGQ---LVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIEL 192

Query: 272 LSGE 275
            +G 
Sbjct: 193 ATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 24/177 (13%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           GK V + +  LR+    E L   + ++   HH +++ +  + + G+  ++V E + G  L
Sbjct: 47  GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106

Query: 175 ADCLRNPRNPSFTVLSTWLS----------------RMQSSSIIVSEENAGSLCAKICHF 218
            D + + R     + +  LS                 ++S SI+++ +       K+  F
Sbjct: 107 TDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR----IKLSDF 162

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
           G    C +VS  E  K   + GT  +MAPE  +      + D+++ G++V+E++ GE
Sbjct: 163 G---FCAQVS-KEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 20/157 (12%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL-RNPR--NPSFTVLS 190
           LRE + V+ +  H +++ L  A       YLV+E+V    L + L  +P    P      
Sbjct: 48  LRE-VKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLPPDAVRSY 105

Query: 191 TW-----LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCGEVSGNESGKVNKIE 239
            W     ++   S +II   +  EN   + S   K+C FG A     +    +  +    
Sbjct: 106 IWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARA---LRARPASPLTDYV 162

Query: 240 GTRGYMAPEFQASGVVTQK-CDVYAFGVVVLELLSGE 275
            TR Y APE         K  DV+A G ++ ELL GE
Sbjct: 163 ATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGE 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 32/192 (16%)

Query: 120 IFQRKLRRSLDL-EQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY-EHVSGANLADC 177
           I  R   R  D+ + LR  +  +    H ++++ LG   +      ++ E+V G ++  C
Sbjct: 40  IAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLG-FETTEEYLSIFLEYVPGGSIGSC 98

Query: 178 LRNP--------RNPSFTVLSTWLSRMQSSSIIVSEENAGSL-------CAKICHFGTAE 222
           LR          R  +  VL   L+ + S  I+  +  A +L       C KI  FG ++
Sbjct: 99  LRTYGRFEEQLVRFFTEQVLEG-LAYLHSKGILHRDLKADNLLVDADGIC-KISDFGISK 156

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEF---QASGVVTQKCDVYAFGVVVLELLSG----- 274
              ++  N+      ++G+  +MAPE     + G  + K D+++ G VVLE+ +G     
Sbjct: 157 KSDDIYDNDQN--MSMQGSVFWMAPEVIHSYSQGY-SAKVDIWSLGCVVLEMFAGRRPWS 213

Query: 275 -EEVLKFVFDEG 285
            EE +  +F  G
Sbjct: 214 DEEAIAAMFKLG 225

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 48.1 bits (114), Expect = 2e-06
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 39/168 (23%)

Query: 138 LSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR----NPSF------ 186
           L V+C+  HH ++I LLGAC      YL  E+    NL D LR  R    +P+F      
Sbjct: 46  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 105

Query: 187 --TVLSTWLSRMQSSSI----IVSEEN-------------AGSLCAKICHFGTAELCGEV 227
             T+ S  L    +        +S++                +  AKI  FG       +
Sbjct: 106 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG-------L 158

Query: 228 SGNESGKVNKIEGTRG--YMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           S  +   V K  G     +MA E     V T   DV+++GV++ E++S
Sbjct: 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 47/172 (27%)

Query: 138 LSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR----NPSF------ 186
           L V+C+  HH ++I LLGAC +    Y+  E+    NL D LR  R    +P+F      
Sbjct: 53  LEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGT 112

Query: 187 -TVLST---------------WLSRMQ-------SSSIIVSEENAGSLCAKICHFGTAEL 223
            + L++               +LS  Q       + +++V E    +L +KI  FG    
Sbjct: 113 ASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE----NLASKIADFG---- 164

Query: 224 CGEVSGNESGKVNKIEGTRG--YMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
              +S  E   V K  G     +MA E     V T K DV++FGV++ E++S
Sbjct: 165 ---LSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 28/164 (17%)

Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSF- 186
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR        
Sbjct: 43  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 102

Query: 187 --------TVLSTWLSRMQSSSII----------VSEENAGSLCAKICHFGTAELC-GEV 227
                   T +S+ +  ++  + I          V E +      K+  FG + L  G+ 
Sbjct: 103 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHL----VKVADFGLSRLMTGDT 158

Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
               +G    I+ T    APE  A    + K DV+AFGV++ E+
Sbjct: 159 YTAHAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 37/176 (21%)

Query: 144 SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-----NPSFTVLSTWLSRMQS 198
            HH  +++LLG   +G    +V E ++  +L   LR+ R     NP     +  L +   
Sbjct: 68  CHH--VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPT--LQKFIQ 123

Query: 199 SSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG--------------- 243
            +  +++  A     K  H   A     V+ + + K+     TR                
Sbjct: 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 244 ---YMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGI 286
              +MAPE    GV T K DV++FGVV+ E+          LS EEVLKFV D G 
Sbjct: 184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH 239

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 27/172 (15%)

Query: 126 RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR------ 179
           +    +++LR+ +  + + +H +++K   + V G+  +LV  ++SG +L D ++      
Sbjct: 38  KCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRG 97

Query: 180 -NPRNPSFTVLSTWLSRM-------------QSSSIIVSEENAGSLCAKICHFGTAELCG 225
                   TVL   L  +             ++ +I++ E+  GS+  KI  FG +    
Sbjct: 98  GLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGED--GSV--KIADFGVSASLA 153

Query: 226 EVSGNESGKVNKIEGTRGYMAPEF--QASGVVTQKCDVYAFGVVVLELLSGE 275
           +             GT  +MAPE   Q  G    K D+++FG+  +EL +G 
Sbjct: 154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGY-DFKADIWSFGITAIELATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 67/264 (25%)

Query: 138 LSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR----NPSFTVLSTW 192
           L V+C+  HH ++I LLGAC      YL  E+    NL D LR  R    +P+F + ++ 
Sbjct: 58  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 117

Query: 193 LSRMQSSSIIVSEENAG-------------------------SLCAKICHFGTAELCGEV 227
            S + S  ++    +                           +  AKI  FG +      
Sbjct: 118 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR----- 172

Query: 228 SGNESGKVNKIEGTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVF 282
                G+   ++ T G     +MA E     V T   DV+++GV++ E++S         
Sbjct: 173 -----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--------- 218

Query: 283 DEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPG 342
             G   Y  ++  +   +   G           RL+   P+   +++  L  QC  E P 
Sbjct: 219 -LGGTPYCGMTCAELYEKLPQG----------YRLEK--PLNCDDEVYDLMRQCWREKPY 265

Query: 343 KRPDMRQVTGLVSKMYLESKNWAD 366
           +RP   Q+   +++M  E K + +
Sbjct: 266 ERPSFAQILVSLNRMLEERKTYVN 289

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 26/185 (14%)

Query: 106 SASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV 165
              W+  +R   V I   K    L  +  ++ +  + R  H  LI L   C  G   Y++
Sbjct: 24  EGLWKNRVR---VAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80

Query: 166 YEHVSGANLADCLRNPRNPSFTV---------LSTWLSRMQSSSIIVSEENA-------G 209
            E +   +L   LR+P      V         ++  ++ ++  + I  +  A        
Sbjct: 81  TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED 140

Query: 210 SLCAKICHFGTAELCGE-VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV 268
            +C K+  FG A L  E V  +   K+        + APE  + G  + K DV++FG+++
Sbjct: 141 LVC-KVADFGLARLIKEDVYLSSDKKI-----PYKWTAPEAASHGTFSTKSDVWSFGILL 194

Query: 269 LELLS 273
            E+ +
Sbjct: 195 YEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 31/199 (15%)

Query: 96  LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGA 155
           L KK  +      W G   G   +  +   + S+  E      +++ +  H  L++L  A
Sbjct: 10  LVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLY-A 68

Query: 156 CVSGNCGYLVYEHVSGANLADCLRNPRNPSFTV------------------LSTWLSR-M 196
            V+    Y++ E++   +L D L+ P     T+                     ++ R +
Sbjct: 69  VVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDL 128

Query: 197 QSSSIIVSEENAGSLCAKICHFGTAELC--GEVSGNESGKVNKIEGTRGYMAPEFQASGV 254
           ++++I+VSE    +LC KI  FG A L    E +  E  K   I+ T    APE    G 
Sbjct: 129 RAANILVSE----TLCCKIADFGLARLIEDNEYTAREGAKF-PIKWT----APEAINYGT 179

Query: 255 VTQKCDVYAFGVVVLELLS 273
            T K DV++FG+++ E+++
Sbjct: 180 FTIKSDVWSFGILLTEIVT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 45.2 bits (108), Expect = 2e-05
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
            K+  FG   L  E+S +E  + N   GT  Y+APE        +  D ++ GV++ E+L
Sbjct: 132 IKLTDFG---LAKELS-SEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187

Query: 273 SG 274
           +G
Sbjct: 188 TG 189

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 35/163 (21%), Positives = 75/163 (46%), Gaps = 26/163 (15%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL 189
           ++E +++ ++V+ +     + K  G+ + G   +++ E++ G +  D LR      F + 
Sbjct: 45  EIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQI- 103

Query: 190 STWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES 232
           +T L  +                 +++++++SE+       K+  FG A   G+++  + 
Sbjct: 104 ATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD----VKLADFGVA---GQLTDTQI 156

Query: 233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
            K N   GT  +MAPE         K D+++ G+  +EL  GE
Sbjct: 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 31/145 (21%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIE----GTRGYMAPEFQASGVVTQKCDVYAFGVVVL 269
           K+C FG +   GE+       +N I     GT  YM+PE    G  T K DV++ G+ ++
Sbjct: 144 KLCDFGVS---GEL-------INSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISII 193

Query: 270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR---RLKDSYPVEVA 326
           EL  G    KF F             D   +   G +  +++ V     RL  S   E  
Sbjct: 194 ELALG----KFPFAFSNI-------DDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDL 242

Query: 327 EKMVLLGLQCVDEDPGKRPDMRQVT 351
              V     C+ +DP +RP  +Q+ 
Sbjct: 243 RDFVDA---CLLKDPTERPTPQQLC 264

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 51/192 (26%), Positives = 77/192 (40%), Gaps = 43/192 (22%)

Query: 134 LRERLSVICRS--------HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR--- 182
           LRER+  +  +        HH  +++LLG    G    +V E ++  +L   LR+ R   
Sbjct: 50  LRERIEFLNEASVMKGFTCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEA 107

Query: 183 -NPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGT 241
            N       T L  M   +  +++  A     K  H   A     V+ + + K+     T
Sbjct: 108 ENNPGRPPPT-LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 166

Query: 242 RG------------------YMAPEFQASGVVTQKCDVYAFGVVVLEL----------LS 273
           R                   +MAPE    GV T   D+++FGVV+ E+          LS
Sbjct: 167 RDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226

Query: 274 GEEVLKFVFDEG 285
            E+VLKFV D G
Sbjct: 227 NEQVLKFVMDGG 238

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 43.9 bits (103), Expect = 7e-05
 Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 59/186 (31%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP----S 185
           DL    E + +I +  H ++I LLGAC      Y++ E+ S  NL + LR  R P    S
Sbjct: 66  DLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 123

Query: 186 FTV---------------LSTWLSR--------------MQSSSIIVSEENAGSLCAKIC 216
           + +                +  ++R              + + +++V+E N      KI 
Sbjct: 124 YDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNV----MKIA 179

Query: 217 HFGTAELCGEVSGNESGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVV 267
            FG A             VN I+     T G     +MAPE     V T + DV++FGV+
Sbjct: 180 DFGLAR-----------DVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 228

Query: 268 VLELLS 273
           + E+ +
Sbjct: 229 MWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 43.9 bits (104), Expect = 7e-05
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE----FQASGVVTQKCDVYAFGVV 267
             KIC FG A    E  G  +G + +   TR Y APE    FQ+    T+  DV++ G +
Sbjct: 143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQS---YTKAIDVWSVGCI 199

Query: 268 VLELLSGEEVLK 279
           + ELL  + V K
Sbjct: 200 LAELLGRKPVFK 211

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 51/257 (19%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
           W GT  G   +  +     ++  E   +   ++ +  H  L+ L  A VS    Y+V E 
Sbjct: 23  WMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLY-AVVSEEPIYIVTEF 81

Query: 169 VSGANLADCLRNP-----RNPSFTVLST-------WLSRM-------QSSSIIVSEENAG 209
           +   +L D L+       + P    ++        ++ RM       ++++I+V +    
Sbjct: 82  MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD---- 137

Query: 210 SLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVL 269
           +L  KI  FG A L   +  NE       +    + APE    G  T K DV++FG+++ 
Sbjct: 138 NLVCKIADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194

Query: 270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG-GVRKWVDRRLKDSYPVEVAEK 328
           EL                       V K      G V   V + V+R  +   P    E 
Sbjct: 195 EL-----------------------VTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPES 231

Query: 329 MVLLGLQCVDEDPGKRP 345
           +  L   C  +DP +RP
Sbjct: 232 LHELMKLCWKKDPDERP 248

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 58/253 (22%), Positives = 93/253 (36%), Gaps = 91/253 (35%)

Query: 146 HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP--------------------- 184
           H ++I LLG C      Y+V E+ +  NL D LR  R P                     
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134

Query: 185 -SFTV-LSTWLSRMQSSSII----------VSEENAGSLCAKICHFGTAELCGEVSGNES 232
            SF   ++  +  + S   I          V+E++      KI  FG A    ++   + 
Sbjct: 135 VSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHV----MKIADFGLAR---DIHHIDY 187

Query: 233 GKVNKIEGTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL--LSG--------EEV 277
            +    + T G     +MAPE     V T + DV++FGV++ E+  L G        EE+
Sbjct: 188 YR----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243

Query: 278 LKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCV 337
            K +     +GYR    ++K                        P    +++  L   C 
Sbjct: 244 FKLL----KEGYR----MEK------------------------PQNCTQELYHLMRDCW 271

Query: 338 DEDPGKRPDMRQV 350
            E P +RP  +Q+
Sbjct: 272 HEVPSQRPTFKQL 284

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 34/162 (20%), Positives = 77/162 (47%), Gaps = 24/162 (14%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR-NPRNPSF-- 186
           ++E +++ ++V+ +     + +  G+ + G   +++ E++ G +  D L+  P   ++  
Sbjct: 45  EIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIA 104

Query: 187 TVLSTWLSRM-------------QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG 233
           T+L   L  +             +++++++SE+       K+  FG A   G+++  +  
Sbjct: 105 TILREILKGLDYLHSERKIHRDIKAANVLLSEQGD----VKLADFGVA---GQLTDTQI- 156

Query: 234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
           K N   GT  +MAPE         K D+++ G+  +EL  GE
Sbjct: 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 35/185 (18%)

Query: 114 RGKDVIIFQRKLRRSLD---LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS 170
            G+ V + +  LRR       + LRE +  +    H  ++KLL     G+   LV E++ 
Sbjct: 24  TGETVALKKVALRRLEGGIPNQALRE-IKALQACQHPYVVKLLDVFPHGSGFVLVMEYM- 81

Query: 171 GANLADCLRNPRNP-------SFT-VLSTWLSRMQSSSII---VSEEN---AGSLCAKIC 216
            ++L++ LR+   P       S+  +L   ++ M ++ I+   +   N   +     KI 
Sbjct: 82  PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIA 141

Query: 217 HFGTAEL-CGEVSGNESGKVNKIEGTRGYMAPE------FQASGVVTQKCDVYAFGVVVL 269
            FG A L   E     S +V     TR Y APE          GV     D++A G +  
Sbjct: 142 DFGLARLFSEEEPRLYSHQV----ATRWYRAPELLYGARKYDPGV-----DLWAVGCIFA 192

Query: 270 ELLSG 274
           ELL+G
Sbjct: 193 ELLNG 197

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 35/173 (20%), Positives = 82/173 (47%), Gaps = 16/173 (9%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G++V I Q  L++    E +   + V+  + + +++  L + + G+  ++V E+++G +L
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

Query: 175 ADCLRNPRNPSFTVLSTW------LSRMQSSSIIVSEENAGSL------CAKICHFGTAE 222
            D +         + +        L  + S+ +I  +  + ++        K+  FG   
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--- 161

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
            C +++  +S K + + GT  +MAPE         K D+++ G++ +E++ GE
Sbjct: 162 FCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 42.0 bits (98), Expect = 3e-04
 Identities = 36/177 (20%), Positives = 83/177 (46%), Gaps = 24/177 (13%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G++V I Q  L++    E +   + V+    + +++  L + + G+  ++V E+++G +L
Sbjct: 44  GQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSL 103

Query: 175 AD---------------CLRNPRNPSFTVLSTWLSR-MQSSSIIVSEENAGSLCAKICHF 218
            D               C    +   F   +  + R ++S ++++  + +     K+  F
Sbjct: 104 TDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGS----VKLTDF 159

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
           G    C +++  +S K + + GT  +MAPE         K D+++ G++ +E++ GE
Sbjct: 160 G---FCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 41.4 bits (97), Expect = 4e-04
 Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 58/259 (22%)

Query: 116 KDVIIFQRKLRRSLDLEQL--RERLS------VICRSHHSSLIKLLGACVSGNCGYLVYE 167
           K VII Q      + +EQ+   ERL+      V+    H ++I+     +      +V E
Sbjct: 26  KLVIIKQ------IPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79

Query: 168 HVSGANLADCLRNPRN---PSFTVLSTW------LSRMQSSSIIVSE-------ENAGSL 211
           +  G  LA+ ++   N      T+L  +      L  + +  I+  +        +   +
Sbjct: 80  YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM 139

Query: 212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
             KI  FG +++    S     K   + GT  Y++PE        QK D++A G V+ EL
Sbjct: 140 VVKIGDFGISKILSSKS-----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL 194

Query: 272 LSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVL 331
            S    LK  F    +     ++V K        +            D Y  ++  + ++
Sbjct: 195 AS----LKRAF----EAANLPALVLKIMSGTFAPIS-----------DRYSPDL--RQLI 233

Query: 332 LGLQCVDEDPGKRPDMRQV 350
           L +  ++ DP KRP + Q+
Sbjct: 234 LSM--LNLDPSKRPQLSQI 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 41.4 bits (98), Expect = 4e-04
 Identities = 41/185 (22%), Positives = 82/185 (44%), Gaps = 39/185 (21%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERL----SVICRSHHSSLIKLLGACVSGNCGYLVYEHVS 170
           GK+V I + +LR+     Q +E +     ++    H +++    + + G+  ++V E++ 
Sbjct: 44  GKEVAIKKMRLRK-----QNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMD 98

Query: 171 GANLADCLRNPRNPSF-------TVLSTWLSRMQ-------------SSSIIVSEENAGS 210
           G +L D +    N           V    L  ++             S +I++S++  GS
Sbjct: 99  GGSLTDIITQ--NFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD--GS 154

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
           +  K+  FG      +++  E  K N + GT  +MAPE         K D+++ G++ +E
Sbjct: 155 V--KLADFG---FAAQLT-KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIE 208

Query: 271 LLSGE 275
           +  GE
Sbjct: 209 MAEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 59/233 (25%), Positives = 95/233 (40%), Gaps = 55/233 (23%)

Query: 139 SVICRSHHSSLIKLLGACVSGNCG-YLVYEHVSGANLADCLRNPRNPS------------ 185
           SV+ +  HS+L++LLG  V    G Y+V E+++  +L D LR+ R  S            
Sbjct: 51  SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSL 109

Query: 186 -------FTVLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK 237
                  +   + ++ R + + +++VSE+N     AK+  FG   L  E S  +      
Sbjct: 110 DVCEAMEYLEANNFVHRDLAARNVLVSEDNV----AKVSDFG---LTKEASSTQDTGKLP 162

Query: 238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK 297
           ++ T    APE       + K DV++FG+++ E+ S   V           Y R+ + D 
Sbjct: 163 VKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGRV----------PYPRIPLKDV 208

Query: 298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                   V  V K       D  P  V + M     QC   D   RP   Q+
Sbjct: 209 --------VPRVEKGYKMDAPDGCPPVVYDVMK----QCWHLDAATRPSFLQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 6e-04
 Identities = 53/242 (21%), Positives = 87/242 (35%), Gaps = 68/242 (28%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H ++I+L G         ++ E++   +L   LR   +  FTV               +
Sbjct: 63  DHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKY 121

Query: 193 LSRMQS-------SSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYM 245
           LS M          +I+V+      L  K+  FG +    +     + K  KI   R + 
Sbjct: 122 LSEMNYVHRDLAARNILVNSN----LVCKVSDFGLSRRLEDSEATYTTKGGKIP-IR-WT 175

Query: 246 APEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYRRVSVV 295
           APE  A    T   DV++FG+V+ E++S           ++V+K V     DGYR     
Sbjct: 176 APEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV----EDGYRLPP-- 229

Query: 296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS 355
                                     P++    +  L L C  +D  +RP   Q+   + 
Sbjct: 230 --------------------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLD 263

Query: 356 KM 357
           KM
Sbjct: 264 KM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 18/182 (9%)

Query: 111 GTIRGKDVIIFQRKLRRSLD--LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
           GT+     + + R      +  +E LR+ + ++ R +H  +I++LGA    +   L  E 
Sbjct: 25  GTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW 84

Query: 169 VSGANLADCLRN--PRNPSFTV-----LSTWLSRMQSSSIIVSEENAGSLCA-------K 214
           ++G +++  L        +  +     L   LS +  + II  +    +L         +
Sbjct: 85  MAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLR 144

Query: 215 ICHFGTA-ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           I  FG A  L  + +G    +  ++ GT  +MAPE        + CDV++ G V++E+ +
Sbjct: 145 IADFGAAARLAAKGTGAGEFQ-GQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT 203

Query: 274 GE 275
            +
Sbjct: 204 AK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 6e-04
 Identities = 35/173 (20%), Positives = 82/173 (47%), Gaps = 16/173 (9%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G++V I Q  L++    E +   + V+  + + +++  L + + G+  ++V E+++G +L
Sbjct: 44  GQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 103

Query: 175 ADCLRNPRNPSFTVLSTW------LSRMQSSSIIVSEENAGSL------CAKICHFGTAE 222
            D +         + +        L  + S+ +I  +  + ++        K+  FG   
Sbjct: 104 TDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG--- 160

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
            C +++  +S K + + GT  +MAPE         K D+++ G++ +E++ GE
Sbjct: 161 FCAQITPEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 53/199 (26%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL 189
           D E+  E L+      H +++K  G C  G+   +V+E++   +L   LR+   P    L
Sbjct: 54  DFEREAELLTNF---QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRS-HGPDAAFL 109

Query: 190 STWLSRMQSSSI-----IVSEENAG-----------------------SLCAKICHFGTA 221
            +  S M   ++     I  +  +G                        L  KI  FG +
Sbjct: 110 KSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMS 169

Query: 222 ELCGEVSGNESGKVNKIEGTR----GYMAPEFQASGVVTQKCDVYAFGVVVLEL------ 271
               +V   +     ++ G       +M PE       T + DV++FGVV+ E+      
Sbjct: 170 R---DVYTTD---YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ 223

Query: 272 ----LSGEEVLKFVFDEGI 286
               LS EEV++ +  +G 
Sbjct: 224 PWYGLSNEEVIECI-TQGR 241

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 41.0 bits (96), Expect = 6e-04
 Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 27/174 (15%)

Query: 122 QRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRN- 180
             K R+   L+ L   ++++    H ++++ LG+ +  +   +  E+V G ++A  L N 
Sbjct: 41  SSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNY 100

Query: 181 -------PRNPSFTVLSTWLSRMQSSSII--------VSEENAGSLCAKICHFGTAELCG 225
                   RN    +L   L+ + +  II        +  +N G +  KI  FG ++   
Sbjct: 101 GAFEETLVRNFVRQIL-KGLNYLHNRGIIHRDIKGANILVDNKGGI--KISDFGISK--- 154

Query: 226 EVSGNE-SGKVNK----IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
           ++  N  S K N     ++G+  +MAPE       T+K D+++ G +V+E+L+G
Sbjct: 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 7e-04
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 6/62 (9%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELL 272
           K+  FG A    +VS +++     + GT  +MAPE  + SG  +   D+++ G  V+ELL
Sbjct: 139 KLADFGVATKLNDVSKDDAS----VVGTPYWMAPEVIEMSGA-STASDIWSLGCTVIELL 193

Query: 273 SG 274
           +G
Sbjct: 194 TG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.6 bits (95), Expect = 8e-04
 Identities = 54/239 (22%), Positives = 90/239 (37%), Gaps = 43/239 (17%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR 182
            K+ R    E + E   V+ +   S +I+   + +      +V E+    +L   L+  R
Sbjct: 36  SKMNRREREEAIDEA-RVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQR 94

Query: 183 NPSFTVLSTW---------LSRMQSSSIIVSEENAGSLC------AKICHFGTAELCGEV 227
                    W         L+ + S  I+  +  + +L        KI   G A+L  + 
Sbjct: 95  GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD- 153

Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID 287
               +   N I GT  Y++PE        +K DV+A GVV+ E  +G    K  FD    
Sbjct: 154 ---NTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG----KHPFDANNQ 206

Query: 288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD 346
           G    +++ K    V   V              Y  ++A+    L  QC+ +D  +RPD
Sbjct: 207 G----ALILKIIRGVFPPVSQ-----------MYSQQLAQ----LIDQCLTKDYRQRPD 246

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 40.7 bits (95), Expect = 8e-04
 Identities = 58/273 (21%), Positives = 99/273 (36%), Gaps = 65/273 (23%)

Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFT 187
           S +L  L    +++ + +H  +IKL GAC       L+ E+    +L   LR  R    +
Sbjct: 44  SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPS 103

Query: 188 VLSTWLSRMQSSSIIVSEE--NAGSLCA---------------KICHFGTAELCGEVSGN 230
            L +  +R  S      E     G L +               K+ H   A     V+  
Sbjct: 104 YLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG 163

Query: 231 ESGKVNKIEGTRG------------------YMAPEFQASGVVTQKCDVYAFGVVVLELL 272
              K++    +R                   +MA E     + T + DV++FGV++ E++
Sbjct: 164 RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223

Query: 273 SGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY----PVEVAEK 328
           +           G + Y               G+   R +    LK  Y    P   +E+
Sbjct: 224 T----------LGGNPYP--------------GIAPERLF--NLLKTGYRMERPENCSEE 257

Query: 329 MVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES 361
           M  L L C  ++P KRP    ++  + KM ++S
Sbjct: 258 MYNLMLTCWKQEPDKRPTFADISKELEKMMVKS 290

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 40.2 bits (94), Expect = 9e-04
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 33/174 (18%)

Query: 126 RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPS 185
           R S  ++ L E +++     H ++++ LG+        +  E V G +L+  LR+   P 
Sbjct: 44  RDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPL 103

Query: 186 FTVLST-------------WLSRMQSSSIIVSEE--------NAGSLCAKICHFGTAE-L 223
                T             +L   Q    IV  +        N  S   KI  FGT++ L
Sbjct: 104 KDNEQTIIFYTKQILEGLKYLHDNQ----IVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159

Query: 224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGE 275
            G     E+       GT  YMAPE    G        D+++ G  ++E+ +G+
Sbjct: 160 AGINPCTET-----FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.1 bits (94), Expect = 9e-04
 Identities = 49/218 (22%), Positives = 81/218 (37%), Gaps = 44/218 (20%)

Query: 146 HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ-------- 197
           H +LI+L G  V  +   +V E     +L D LR      F + +     +Q        
Sbjct: 55  HENLIRLYGV-VLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL 113

Query: 198 -SSSII---VSEEN---AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQ 250
            S   I   ++  N   A     KI  FG      +   +   + +  +    + APE  
Sbjct: 114 ESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL-KVPFAWCAPESL 172

Query: 251 ASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV 309
            +   +   DV+ FGV + E+ + GEE        G+ G + +  +DK  E         
Sbjct: 173 RTRTFSHASDVWMFGVTLWEMFTYGEEPWA-----GLSGSQILKKIDKEGE--------- 218

Query: 310 RKWVDRRLK--DSYPVEVAEKMVLLGLQCVDEDPGKRP 345
                 RL+  ++ P ++   M    LQC   +P  RP
Sbjct: 219 ------RLERPEACPQDIYNVM----LQCWAHNPADRP 246

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 40.1 bits (93), Expect = 0.001
 Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 26/163 (15%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL 189
           ++E +++ ++V+ +     + K  G+ +     +++ E++ G +  D L  P     T +
Sbjct: 45  EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQI 103

Query: 190 STWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES 232
           +T L  +                 +++++++SE        K+  FG A   G+++  + 
Sbjct: 104 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGE----VKLADFGVA---GQLTDTQI 156

Query: 233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
            K N   GT  +MAPE         K D+++ G+  +EL  GE
Sbjct: 157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 49/261 (18%)

Query: 111 GTIRGKDVIIFQRKLRRSL--DLE-QLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE 167
           G +R  +  +  +  R +L  DL+ +  +   ++ +  H ++++L+G C      Y+V E
Sbjct: 14  GRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 73

Query: 168 HVSGANLADCLRN--PRNPSFTVL------STWLSRMQSSSII----------VSEENAG 209
            V G +    LR   PR     ++      +  +  ++S   I          V+E+N  
Sbjct: 74  LVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNV- 132

Query: 210 SLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVL 269
               KI  FG +    +     +G + +I     + APE    G  + + DV++FG+++ 
Sbjct: 133 ---LKISDFGMSREEEDGVYASTGGMKQIPVK--WTAPEALNYGRYSSESDVWSFGILLW 187

Query: 270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKM 329
           E           F  G   Y  +S   +  EA+  GV         RL    P    + +
Sbjct: 188 E----------AFSLGAVPYANLS-NQQTREAIEQGV---------RLP--CPELCPDAV 225

Query: 330 VLLGLQCVDEDPGKRPDMRQV 350
             L  +C + DPG+RP    V
Sbjct: 226 YRLMERCWEYDPGQRPSFSTV 246

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 26/178 (14%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERL---SVICRSH-HSSLIKLLGACVSGNCGYLVYEHVS 170
           G+ V +    LR+    +Q RE L    VI R + H +++++  + + G   +++ E + 
Sbjct: 46  GRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQ 101

Query: 171 GANLADCLRNPR-------NPSFTVLSTWLSRMQSSSIIVSEENAGSLC------AKICH 217
           G  L D +   R           +VL   L  + S  +I  +  + S+        K+  
Sbjct: 102 GGALTDIVSQTRLNEEQIATVCESVLQA-LCYLHSQGVIHRDIKSDSILLTLDGRVKLSD 160

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
           FG    C ++S  +  K   + GT  +MAPE  +      + D+++ G++V+E++ GE
Sbjct: 161 FG---FCAQIS-KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 18/191 (9%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR 182
           + LR+S +    RERL++I      +++ L    VS +  +LV +H  G  L   +    
Sbjct: 24  KGLRKSSEYS--RERLTIIPHCV-PNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL 80

Query: 183 NPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKI----------CHFGTAELCGEVSGNES 232
           N     +  W + M  +   +  E  G +C  +           H             +S
Sbjct: 81  NIPEECVKRWAAEMVVALDALHRE--GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS 138

Query: 233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV 292
                +E    Y APE       T+ CD ++ G ++ ELL+G+ +++     GI+ +  +
Sbjct: 139 CDGEAVE--NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE-CHPSGINTHTTL 195

Query: 293 SVVDKASEAVA 303
           ++ +  SE   
Sbjct: 196 NIPEWVSEEAR 206

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 10/53 (18%)

Query: 244 YMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGI 286
           +M+PE    GV T   DV++FGVV+ E+          +S E+VL+FV + G+
Sbjct: 187 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL 239

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 29/138 (21%)

Query: 214 KICHFGTAELCG-EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
           K+  FG +++ G E S  E+     + GT  YM+PE         K D++A G V+ ELL
Sbjct: 141 KLGDFGISKILGSEYSMAET-----VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL 195

Query: 273 SGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLL 332
           +    LK  FD                  V   V G    V       Y  E    ++ L
Sbjct: 196 T----LKRTFD-----------ATNPLNLVVKIVQGNYTPVV----SVYSSE----LISL 232

Query: 333 GLQCVDEDPGKRPDMRQV 350
               + +DP KRP   +V
Sbjct: 233 VHSLLQQDPEKRPTADEV 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 41/177 (23%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP----S 185
           DL    E + +I +  H ++I LLGAC      Y++ E+ S  NL + LR  R P    S
Sbjct: 63  DLVSEMEMMKMIGK--HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYS 120

Query: 186 FTVLS----------------------TWLSR-------MQSSSIIVSEENAGSLCAKIC 216
           F                           +L+        + + +++V+E+N      KI 
Sbjct: 121 FDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNV----MKIA 176

Query: 217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
            FG A     +   +     ++     +MAPE     V T + DV++FGV++ E+ +
Sbjct: 177 DFGLARDVHNIDYYKKTTNGRLPVK--WMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 26/178 (14%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERL---SVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS 170
           G+ V + +  LR+    +Q RE L    VI R   H +++++  + + G+  ++V E + 
Sbjct: 44  GRQVAVKKMDLRK----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99

Query: 171 GANLADCLRNPR-------NPSFTVLSTWLSRMQSSSIIVSEENAGSLC------AKICH 217
           G  L D + + R            VL   LS + +  +I  +  + S+        K+  
Sbjct: 100 GGALTDIVTHTRMNEEQIATVCLAVLKA-LSFLHAQGVIHRDIKSDSILLTSDGRVKLSD 158

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
           FG    C +VS  E  +   + GT  +MAPE  +      + D+++ G++V+E++ GE
Sbjct: 159 FG---FCAQVS-KEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 41/177 (23%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP----- 184
           DL    E + +I +  H ++I LLGAC      Y++ E+ S  NL + LR  R P     
Sbjct: 69  DLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYC 126

Query: 185 -----------SFTVLST----------WLSR-------MQSSSIIVSEENAGSLCAKIC 216
                      SF  L +          +L+        + + +++V+E+N      KI 
Sbjct: 127 YNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNV----MKIA 182

Query: 217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
            FG A     +   +     ++     +MAPE     + T + DV++FGV++ E+ +
Sbjct: 183 DFGLARDIHHIDYYKKTTNGRLPVK--WMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	381
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
PTZ00284	467	protein kinase; Provisional	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.98
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.98
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.98
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.98
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.98
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.98
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.98
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.98
PHA03210	501	serine/threonine kinase US3; Provisional	99.98
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.98
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.98
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.98
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.98
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.98
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.98
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.98
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.98
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.98
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.98
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.97
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.96
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.93
KOG1152	772	consensus Signal transduction serine/threonine kin	99.92
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.91
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.9
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.9
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.89
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.89
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.88
PLN00181	793	protein SPA1-RELATED; Provisional	99.85
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.8
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.8
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.79
PRK09188	365	serine/threonine protein kinase; Provisional	99.78
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.77
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.76
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.74
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.7
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.7
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.67
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.66
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.63
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.62
PRK10345	210	hypothetical protein; Provisional	99.62
PRK12274	218	serine/threonine protein kinase; Provisional	99.59
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.57
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.55
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.54
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.51
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.48
PRK14879	211	serine/threonine protein kinase; Provisional	99.46
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.4
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.39
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.31
smart00090	237	RIO RIO-like kinase.	99.25
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.22
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.2
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.13
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.12
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.1
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.94
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.93
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.89
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.78
KOG1243	690	consensus Protein kinase [General function predict	98.67
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.66
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.52
KOG3087	229	consensus Serine/threonine protein kinase [General	98.37
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.23
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.21
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.18
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.09
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.08
COG4248	637	Uncharacterized protein with protein kinase and he	97.91
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.9
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.81
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.75
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.68
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.62
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.55
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.51
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.42
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.39
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.27
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.99
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.92
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.88
PRK09902	216	hypothetical protein; Provisional	96.78
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	96.47
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.38
PRK10593	297	hypothetical protein; Provisional	96.37
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.35
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.32
PRK12396	409	5-methylribose kinase; Reviewed	96.07
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.06
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.05
PLN02876	822	acyl-CoA dehydrogenase	95.39
PLN02756	418	S-methyl-5-thioribose kinase	95.33
PF01636	239	APH: Phosphotransferase enzyme family This family	95.2
PRK05231	319	homoserine kinase; Provisional	95.11
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.81
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.78
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	94.53
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.43
KOG1236	565	consensus Predicted unusual protein kinase [Genera	92.55
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	92.47
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	91.99
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	90.85
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	90.15
PLN02236	344	choline kinase	88.2
COG2334	331	Putative homoserine kinase type II (protein kinase	87.84
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	87.55
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	86.54
PHA00451	362	protein kinase	85.0
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	81.72
KOG3021	313	consensus Predicted kinase [General function predi	80.49

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-47  Score=335.88  Aligned_cols=238  Identities=19%  Similarity=0.256  Sum_probs=192.3

Q ss_pred             ceeeHHHHHHHhcCCcccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEE
Q 016850           81 HIYHLSEICAATNNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACV  157 (381)
Q Consensus        81 ~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~  157 (381)
                      ..++++|++.      ...||+|..|+|||++++  ++-+|+|.+....+. ..+++.+|++++++++|||||.+||.|.
T Consensus        74 ~~i~~~dle~------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~  147 (364)
T KOG0581|consen   74 NGISLSDLER------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY  147 (364)
T ss_pred             cccCHHHhhh------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence            3467777753      367999999999999997  778888887544443 5788999999999999999999999999


Q ss_pred             eCC-eeeEEEeccCCCCHHHHhcCCCCCCccc------------------hHHHHHHhhhcceeecccCCCccceEEccc
Q 016850          158 SGN-CGYLVYEHVSGANLADCLRNPRNPSFTV------------------LSTWLSRMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       158 ~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~------------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                      +.+ ..+|+||||++|+|++++...+..++..                  ..++|+||||+|||++..    +.||||||
T Consensus       148 ~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNsk----GeVKicDF  223 (364)
T KOG0581|consen  148 SNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSK----GEVKICDF  223 (364)
T ss_pred             eCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccC----CCEEeccc
Confidence            988 5999999999999999999765555333                  234567899999999997    66999999


Q ss_pred             ccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHH
Q 016850          219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKA  298 (381)
Q Consensus       219 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~  298 (381)
                      |+++.+-.      ....+++||..|||||.+.+..|+.++||||||++++|+++|+.||......      ....++..
T Consensus       224 GVS~~lvn------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~------~~~~~~Ll  291 (364)
T KOG0581|consen  224 GVSGILVN------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP------YLDIFELL  291 (364)
T ss_pred             cccHHhhh------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC------CCCHHHHH
Confidence            99987522      2667899999999999999999999999999999999999999999754111      11223322


Q ss_pred             HHHHcCCccchhhhhcccccCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          299 SEAVAGGVGGVRKWVDRRLKDSYPVE-VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..++            ....+..|.. +++++++||.+||++||.+||++.|+++
T Consensus       292 ~~Iv------------~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  292 CAIV------------DEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHh------------cCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            2222            2223445554 8999999999999999999999999975

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-45  Score=345.13  Aligned_cols=266  Identities=30%  Similarity=0.500  Sum_probs=215.4

Q ss_pred             CCceeeHHHHHHHhcCCcc-cccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEE
Q 016850           79 NPHIYHLSEICAATNNFLA-KKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGAC  156 (381)
Q Consensus        79 ~~~~~~~~~~~~~~~~f~~-~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~  156 (381)
                      ....|++.++..+|++|.. ..||+|+||.||+|.+.+ +.||||+..........+|.+|+++|.+++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            6778999999999999976 567999999999999975 78999965443332145699999999999999999999999


Q ss_pred             EeCC-eeeEEEeccCCCCHHHHhcCCC--CCCccchH--------------------HHHHHhhhcceeecccCCCccce
Q 016850          157 VSGN-CGYLVYEHVSGANLADCLRNPR--NPSFTVLS--------------------TWLSRMQSSSIIVSEENAGSLCA  213 (381)
Q Consensus       157 ~~~~-~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~--------------------~~~~~l~~~Nill~~~~~~~~~~  213 (381)
                      .+.+ +.+||+|||++|+|.++|+...  .++|.+..                    .+|+|||++|||||++    +.+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~----~~a  216 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED----FNA  216 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC----CCE
Confidence            9988 5999999999999999999865  34443321                    3455778999999987    889


Q ss_pred             EEcccccccccccCCCCcccccccc-CCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          214 KICHFGTAELCGEVSGNESGKVNKI-EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       214 kl~DFG~a~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      ||+|||+|+.....    ....... .||.+|+|||++..+..+.++|||||||+++||+||+.+.+.....     ...
T Consensus       217 KlsDFGLa~~~~~~----~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~-----~~~  287 (361)
T KOG1187|consen  217 KLSDFGLAKLGPEG----DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR-----GEL  287 (361)
T ss_pred             EccCccCcccCCcc----ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCc-----ccc
Confidence            99999999764220    1111222 8999999999999999999999999999999999999887644311     222


Q ss_pred             hHHHHHHHHHcCCccchhhhhccccc-CCCCH-HHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          293 SVVDKASEAVAGGVGGVRKWVDRRLK-DSYPV-EVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      .+.+|....+..+  .+.+++|+.+. ..++. .....+..++.+|++.+|.+||+|.||+++|+.+..
T Consensus       288 ~l~~w~~~~~~~~--~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  288 SLVEWAKPLLEEG--KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             cHHHHHHHHHHCc--chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            3777776666553  78999999987 56664 577889999999999999999999999999966544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-45  Score=339.69  Aligned_cols=236  Identities=25%  Similarity=0.358  Sum_probs=187.9

Q ss_pred             ccccccCCCceEEEEEECCce-EEEEEeccccccc--HHHHHHHHHHHhhcCCCCcceEEEEEEeCC-eeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIRGKD-VIIFQRKLRRSLD--LEQLRERLSVICRSHHSSLIKLLGACVSGN-CGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~-v~vk~~~~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-~~~lv~e~~~~g  172 (381)
                      .+.||.|+||+||+|.++|+. ||||++.......  .+.|.+|+.+|.+|+|||||+|+|+|.+.. .++||||||++|
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG  125 (362)
T ss_pred             hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence            355999999999999999999 8888876543322  568999999999999999999999999887 799999999999


Q ss_pred             CHHHHhcC--CCCCCccch-----------------H-HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          173 NLADCLRN--PRNPSFTVL-----------------S-TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       173 sL~~~l~~--~~~~~~~~~-----------------~-~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|.++|+.  .+.++...+                 . .+|+|||+.|||++...   .++||||||+++......    
T Consensus       126 sL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~---~~~KI~DFGlsr~~~~~~----  198 (362)
T KOG0192|consen  126 SLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG---KTLKIADFGLSREKVISK----  198 (362)
T ss_pred             cHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC---CEEEECCCccceeecccc----
Confidence            99999987  344443322                 2 45667778888888762   279999999998753211    


Q ss_pred             ccccccCCCccccchhhhc--CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          233 GKVNKIEGTRGYMAPEFQA--SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~--~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ...+...||+.|||||++.  ...|+.++|||||||++|||+||+.||.....           ...           ..
T Consensus       199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----------~~~-----------~~  256 (362)
T KOG0192|consen  199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----------VQV-----------AS  256 (362)
T ss_pred             ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----------HHH-----------HH
Confidence            2334478999999999999  56899999999999999999999999975332           111           11


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      .......++..+..+++.+..||.+||..||..||++.+++..|+.+....
T Consensus       257 ~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  257 AVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             HHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence            122344455666668889999999999999999999999999999886643

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-45  Score=336.85  Aligned_cols=245  Identities=24%  Similarity=0.366  Sum_probs=200.3

Q ss_pred             CCceeeHHHHHHHhcCCcccccccCCCceEEEEEECCc-eEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEE
Q 016850           79 NPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGK-DVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV  157 (381)
Q Consensus        79 ~~~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~~~-~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~  157 (381)
                      ....+.-+++..      .+.||+|.||.||.|.+++. .||+|.++.. ....+.|.+|+++|++|+|+|||+++|+|.
T Consensus       199 d~wei~r~~l~l------~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~  271 (468)
T KOG0197|consen  199 DPWEIPREELKL------IRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCT  271 (468)
T ss_pred             CCeeecHHHHHH------HHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEe
Confidence            344566666642      46799999999999999976 9999987554 335678999999999999999999999999


Q ss_pred             eCCeeeEEEeccCCCCHHHHhcCC--CCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccc
Q 016850          158 SGNCGYLVYEHVSGANLADCLRNP--RNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       158 ~~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                      .++.+|||||||+.|+|.++|+..  ......+++                 .+|+||.++|||++++    ..+||+||
T Consensus       272 ~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~----~~vKIsDF  347 (468)
T KOG0197|consen  272 KQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDED----LVVKISDF  347 (468)
T ss_pred             cCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccC----ceEEEccc
Confidence            988999999999999999999973  333333332                 3466788999999998    67999999


Q ss_pred             ccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHH
Q 016850          219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       219 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      |+|+...   .+.........-+..|.|||.+..+.++.+||||||||+||||+| |+.|++....              
T Consensus       348 GLAr~~~---d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn--------------  410 (468)
T KOG0197|consen  348 GLARLIG---DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN--------------  410 (468)
T ss_pred             ccccccC---CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------------
Confidence            9999643   233334445556789999999999999999999999999999999 7777764322              


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                               ..+.+.+++..+...|..|++.+.++|..||+.+|++|||++.+...|++++..
T Consensus       411 ---------~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  411 ---------EEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             ---------HHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence                     224455667777788889999999999999999999999999999999988764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-44  Score=324.15  Aligned_cols=229  Identities=19%  Similarity=0.301  Sum_probs=179.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc--ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR--RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||.|+||+||+|+++  +..||||.+...  .....+.+..|+.+|+.|+|||||+|++++++++.+|||||||.|
T Consensus        14 ~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~g   93 (429)
T KOG0595|consen   14 LSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNG   93 (429)
T ss_pred             ehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCC
Confidence            4567999999999999995  789999987665  333567789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCc--cceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGS--LCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~--~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |||.+||+.++..++..+..                 +|+||||+|||+.......  ..+||+|||+|+.+.     ..
T Consensus        94 GDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~-----~~  168 (429)
T KOG0595|consen   94 GDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ-----PG  168 (429)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC-----ch
Confidence            99999999987776554432                 4567889999998853322  679999999999874     34


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ....+.||++.|||||++..++|+.|+|+||+|+|+|+|++|+.||......           +.....-          
T Consensus       169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~-----------eL~~~~~----------  227 (429)
T KOG0595|consen  169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK-----------ELLLYIK----------  227 (429)
T ss_pred             hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH-----------HHHHHHh----------
Confidence            4567899999999999999999999999999999999999999999743221           1111100          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV  350 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev  350 (381)
                      ......+..+...+..+.+|+...++.+|..|.+..+-
T Consensus       228 k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  228 KGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDF  265 (429)
T ss_pred             ccccccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence            11122233344455566778888888888888775544

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-45  Score=328.97  Aligned_cols=232  Identities=21%  Similarity=0.284  Sum_probs=182.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.|-+|..+  ++.||||++..+...       ....+.+|++||++|+|||||+++++|++.+..||||
T Consensus       176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl  255 (475)
T KOG0615|consen  176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL  255 (475)
T ss_pred             eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence            4678999999999999885  899999998655433       2334679999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCCCcc-------chH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFT-------VLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||++||+|.+.+..++...+.       |++          +.|+||||+|||+..+. ..+.+||+|||+|+..+    
T Consensus       256 E~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~-e~~llKItDFGlAK~~g----  330 (475)
T KOG0615|consen  256 EYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA-EDCLLKITDFGLAKVSG----  330 (475)
T ss_pred             EEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC-cceEEEecccchhhccc----
Confidence            999999999999876644322       222          34567889999998752 34789999999999753    


Q ss_pred             CccccccccCCCccccchhhhcCCC---CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGV---VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                       ......+.||||.|.|||++.+..   +..++||||+||+||-+++|.+||.....+.       .+.+++..   +  
T Consensus       331 -~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-------sl~eQI~~---G--  397 (475)
T KOG0615|consen  331 -EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-------SLKEQILK---G--  397 (475)
T ss_pred             -cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-------cHHHHHhc---C--
Confidence             445678899999999999998654   3457899999999999999999997543321       12221111   0  


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .      -.+.+.....++++..+||.+||..||++|||+.|+|+
T Consensus       398 -~------y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  398 -R------YAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             -c------ccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence             0      01123345678999999999999999999999999975

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.9e-44  Score=334.50  Aligned_cols=229  Identities=17%  Similarity=0.247  Sum_probs=182.3

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+..||+|||+.||.++.  .|..||+|++..+   .....+.+.+||+|.+.|+|||||++|++|+|.+..|||+|+|+
T Consensus        22 ~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~  101 (592)
T KOG0575|consen   22 RGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCH  101 (592)
T ss_pred             eeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecC
Confidence            466799999999999998  3889999987442   34467899999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-------HhhhcceeecccCC------CccceEEcccccccccccCCCCccccccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-------RMQSSSIIVSEENA------GSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-------~l~~~Nill~~~~~------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .|+|..+++.++...+..++.+++       +||..+|+|+|.+.      .|++|||+|||||..+..    ......+
T Consensus       102 ~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~----~~Erk~T  177 (592)
T KOG0575|consen  102 RGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY----DGERKKT  177 (592)
T ss_pred             CccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC----cccccce
Confidence            999999999877776665544333       34444444444443      226799999999988643    3345668


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      .||||.|+|||++....++..+||||+||++|-|+.|++||+..           .+.+-           +..+.... 
T Consensus       178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----------~vket-----------y~~Ik~~~-  234 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----------TVKET-----------YNKIKLNE-  234 (592)
T ss_pred             ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----------hHHHH-----------HHHHHhcC-
Confidence            99999999999999999999999999999999999999999732           11111           11111111 


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..+|...+.++++||.++|+.||.+|||+.+|+.
T Consensus       235 -Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  235 -YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             -cccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             2346678899999999999999999999999964

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.8e-44  Score=304.04  Aligned_cols=229  Identities=15%  Similarity=0.212  Sum_probs=179.1

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEE-EEEeCCe-eeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLG-ACVSGNC-GYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~-~~~~~~~-~~lv~e~~~  170 (381)
                      .++||.|+||+||++++  +|..+|.|++....-.  .+++...|+.+|++|+|||||++|+ .|.+++. ++||||||.
T Consensus        24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~  103 (375)
T KOG0591|consen   24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCD  103 (375)
T ss_pred             HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhc
Confidence            47799999999999987  5888998887643322  4678999999999999999999999 4555555 899999999


Q ss_pred             CCCHHHHhcC----CCCCCccchH---------------------HHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          171 GANLADCLRN----PRNPSFTVLS---------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       171 ~gsL~~~l~~----~~~~~~~~~~---------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      .|+|.+.|+.    .+..+++.+.                     ..|+||||+||+++..    +++||+|||+++.+.
T Consensus       104 ~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~----gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  104 AGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTAN----GVVKLGDFGLGRFLS  179 (375)
T ss_pred             ccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCC----CceeeccchhHhHhc
Confidence            9999999864    3334433322                     2356788999999987    679999999999874


Q ss_pred             cCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                      .    ........+|||.||+||.+.+..|+.++||||+||++|||+.-++||...           ++.....++.   
T Consensus       180 s----~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----------n~~~L~~KI~---  241 (375)
T KOG0591|consen  180 S----KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----------NLLSLCKKIE---  241 (375)
T ss_pred             c----hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----------cHHHHHHHHH---
Confidence            3    444567899999999999999999999999999999999999999999742           2222211111   


Q ss_pred             ccchhhhhcccccCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYP-VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                               ..--++.| ..++.++..||..|+..||+.||+...++..+..
T Consensus       242 ---------qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  242 ---------QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             ---------cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence                     11122334 6789999999999999999999996555554443

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-42  Score=316.92  Aligned_cols=243  Identities=18%  Similarity=0.275  Sum_probs=195.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ++.||+|+|++|++|+..  ++.+|||+...+   .....+.+.+|-.+|.+| .||.||+||-.|.|+..+|+|+||++
T Consensus        78 g~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~  157 (604)
T KOG0592|consen   78 GKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAP  157 (604)
T ss_pred             hheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecC
Confidence            566999999999999985  889999985332   222456788999999999 89999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCC---
Q 016850          171 GANLADCLRNPRNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---  230 (381)
                      +|+|.++|+..+.+.+...                 .++|+||||+||||+.+    +++||+|||.|+.+......   
T Consensus       158 nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~d----mhikITDFGsAK~l~~~~~~~~~  233 (604)
T KOG0592|consen  158 NGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKD----GHIKITDFGSAKILSPSQKSQEN  233 (604)
T ss_pred             CCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCC----CcEEEeeccccccCChhhccccC
Confidence            9999999998877664432                 34567889999999998    77999999999987543322   


Q ss_pred             ------ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          231 ------ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       231 ------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                            .......++||..|.+||+|.++..++.+|||+||||||+|+.|++||....+.        ...+        
T Consensus       234 ~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney--------liFq--------  297 (604)
T KOG0592|consen  234 PVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY--------LIFQ--------  297 (604)
T ss_pred             ccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH--------HHHH--------
Confidence                  111235699999999999999999999999999999999999999999743221        1111        


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCC
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGF  370 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~  370 (381)
                            ++++  +...+|..+++.+.+||.+.|..||.+|+++.+|   -++-+.+..+|+++-..
T Consensus       298 ------kI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qI---k~HpFF~~Vdw~nlw~~  352 (604)
T KOG0592|consen  298 ------KIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQI---KAHPFFEGVDWENLWQQ  352 (604)
T ss_pred             ------HHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHH---hhCcccccCChhhhhhc
Confidence                  1111  2234566777899999999999999999999776   44778888999986443

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-42  Score=311.89  Aligned_cols=248  Identities=18%  Similarity=0.287  Sum_probs=200.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|...  ++.||+|++.+.... ..+++.+|+.+|.+++++||.++||.+..+..++++||||.||+
T Consensus        18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGs   97 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGS   97 (467)
T ss_pred             chhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcc
Confidence            367999999999999986  788999998776555 57889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +.+.|+....+.+..+                 ..+|++|+++|||+...    +.+||+|||++-.+..    ......
T Consensus        98 v~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~----g~vkl~DfgVa~ql~~----~~~rr~  169 (467)
T KOG0201|consen   98 VLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES----GDVKLADFGVAGQLTN----TVKRRK  169 (467)
T ss_pred             hhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc----CcEEEEecceeeeeec----hhhccc
Confidence            9999988665433322                 23456788999999887    5699999999987643    223347


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      +++||+.|||||++....|+.++|||||||+.+||++|.+|+.....                       ..+.-.+.+.
T Consensus       170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----------------------mrvlflIpk~  226 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----------------------MRVLFLIPKS  226 (467)
T ss_pred             cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----------------------ceEEEeccCC
Confidence            89999999999999988999999999999999999999999864322                       1222233444


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH-----------HHHHHHHHhhhhhhh-cCCCccee
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG-----------LVSKMYLESKNWADK-IGFPTDFS  375 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-----------~L~~~~~~~~~~~~~-~~~~~~~~  375 (381)
                      ..+.+...+++.+++||..||.+||+.||+|.++++           .|.+++..-+.|-.. .+.|.++.
T Consensus       227 ~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i~r~~~~~~~~~~~~~~~~  297 (467)
T KOG0201|consen  227 APPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELIDRYKRWRVKKLELPEEIS  297 (467)
T ss_pred             CCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHHHHHHHHhhcccCCcccCC
Confidence            444455578889999999999999999999999985           567777777777775 34444443

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-42  Score=304.84  Aligned_cols=242  Identities=17%  Similarity=0.229  Sum_probs=189.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||+||.++.+  ++-+|+|+.+.+.-.   ..+....|..||.+++||.||+++-.|++.+.+|||+||+.|
T Consensus        30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~G  109 (357)
T KOG0598|consen   30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNG  109 (357)
T ss_pred             eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCC
Confidence            567899999999999885  778898876544332   467788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.|.-+|++++.+.+..+..|                 ++||||+||||+++    ++++|+||||++...    .....
T Consensus       110 GeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~----GHi~LtDFgL~k~~~----~~~~~  181 (357)
T KOG0598|consen  110 GELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQ----GHIKLTDFGLCKEDL----KDGDA  181 (357)
T ss_pred             ccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCC----CcEEEeccccchhcc----cCCCc
Confidence            999999999888876654433                 34788999999998    779999999998632    23334


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ..+.|||+.|||||++.+..|+.++|.||+||++|||++|.+||.....           ......+.           .
T Consensus       182 t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-----------~~~~~~I~-----------~  239 (357)
T KOG0598|consen  182 TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-----------KKMYDKIL-----------K  239 (357)
T ss_pred             cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-----------HHHHHHHh-----------c
Confidence            5568999999999999999999999999999999999999999964221           11111111           1


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-hHHHHHHHHHHHHHhhhhhhhcC
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-MRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                      .. ....+...+.++++++.++|..||++|.. -.++.+.=++-+....+|+.+..
T Consensus       240 ~k-~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~  294 (357)
T KOG0598|consen  240 GK-LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLA  294 (357)
T ss_pred             Cc-CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHh
Confidence            11 12234447889999999999999999974 22333333456677778887643

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=2.3e-42  Score=335.36  Aligned_cols=236  Identities=20%  Similarity=0.285  Sum_probs=189.2

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||+||+|...       ...||||..+..... ..++|+||+++|..|+|||||+|+|+|.+++.+|+|+||
T Consensus       491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY  570 (774)
T KOG1026|consen  491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY  570 (774)
T ss_pred             hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence            467999999999999874       356888876665555 678999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC--------------CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcc
Q 016850          169 VSGANLADCLRNPRN--------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~--------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      |..|||.+||..+..              +...+.+                 ..|+||..+|+|+.++    .+|||+|
T Consensus       571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~----l~VKIsD  646 (774)
T KOG1026|consen  571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN----LVVKISD  646 (774)
T ss_pred             cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc----eEEEecc
Confidence            999999999975432              1111222                 2345778999999998    8899999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      ||+++.+..  .++........-..+|||||.+..++|+.+||||||||+|||+++ |+.||....+             
T Consensus       647 fGLsRdiYs--sDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn-------------  711 (774)
T KOG1026|consen  647 FGLSRDIYS--SDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN-------------  711 (774)
T ss_pred             cccchhhhh--hhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-------------
Confidence            999987521  222222223445789999999999999999999999999999998 8888865433             


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                                +.+.+.+..+.....|.+++.++.+||..||+.+|++||+++||-.+|+......
T Consensus       712 ----------~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  712 ----------QEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             ----------HHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence                      2233334444346678899999999999999999999999999999999876543

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-41  Score=314.00  Aligned_cols=232  Identities=23%  Similarity=0.371  Sum_probs=188.5

Q ss_pred             ceeeHHHHHHHhcCCcccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC
Q 016850           81 HIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN  160 (381)
Q Consensus        81 ~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~  160 (381)
                      +.+.+++|.      ..+-||.|+.|.||+|++.+..||||+++.       .-..+|+-|++|+||||+.|.|+|....
T Consensus       119 WeiPFe~Is------ELeWlGSGaQGAVF~Grl~netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqsP  185 (904)
T KOG4721|consen  119 WEIPFEEIS------ELEWLGSGAQGAVFLGRLHNETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQSP  185 (904)
T ss_pred             ccCCHHHhh------hhhhhccCcccceeeeeccCceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCCc
Confidence            345555552      235689999999999999999999998642       2334788899999999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHhcCCCCCC-----------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          161 CGYLVYEHVSGANLADCLRNPRNPS-----------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++|||||||..|.|...|+..+...                 .++-.++|+|||+-|||+..+.    .|||+|||.++.
T Consensus       186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d----~VKIsDFGTS~e  261 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD----VVKISDFGTSKE  261 (904)
T ss_pred             eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc----eEEeccccchHh
Confidence            9999999999999999999876543                 3334567788889999998874    499999999987


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..+     ......++||..|||||++++...+.|+|||||||+||||+||.-||.......+               ++
T Consensus       262 ~~~-----~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------------Iw  321 (904)
T KOG4721|consen  262 LSD-----KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------------IW  321 (904)
T ss_pred             hhh-----hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------------EE
Confidence            533     2344578999999999999999999999999999999999999999975443221               12


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      +..       ...+....|..+++.++-|+++||+..|..||++.+|+..|.-
T Consensus       322 GVG-------sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  322 GVG-------SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             ecc-------CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            211       2234455677889999999999999999999999999988763

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5.2e-41  Score=310.10  Aligned_cols=258  Identities=16%  Similarity=0.231  Sum_probs=198.4

Q ss_pred             cCC-cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEE
Q 016850           93 NNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ++| ..+.||+|+||.||+|+-+  |.-+|+|+++...-.   ..+.++.|-.+|....+|+||+||-.|.+.+.+||||
T Consensus       141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiM  220 (550)
T KOG0605|consen  141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIM  220 (550)
T ss_pred             ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEE
Confidence            345 3567899999999999875  788999987654433   4567888999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCCCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccC--
Q 016850          167 EHVSGANLADCLRNPRNPSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV--  227 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~--  227 (381)
                      ||+||||+..+|...+.+.+..                 ...+|+||||+|+|+|..    +++||+||||+.-+...  
T Consensus       221 EylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~----GHiKLSDFGLs~gl~~~~~  296 (550)
T KOG0605|consen  221 EYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAK----GHIKLSDFGLSTGLDKKHR  296 (550)
T ss_pred             EecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCC----CCEeeccccccchhhhhhh
Confidence            9999999999999877766443                 345667899999999998    77999999998532110  


Q ss_pred             ---------------------CCC----c----------------cccccccCCCccccchhhhcCCCCCcchhHHHHHH
Q 016850          228 ---------------------SGN----E----------------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGV  266 (381)
Q Consensus       228 ---------------------~~~----~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGv  266 (381)
                                           ...    .                .......+|||.|||||++.+..|+..+|.|||||
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~  376 (550)
T KOG0605|consen  297 IESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGC  376 (550)
T ss_pred             hhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHH
Confidence                                 000    0                01122467999999999999999999999999999


Q ss_pred             HHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 016850          267 VVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD  346 (381)
Q Consensus       267 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs  346 (381)
                      |+|||+.|.+||.......    ....+..|..                .+.-+....++++++|||.+||. ||++|.-
T Consensus       377 ImyEmLvGyPPF~s~tp~~----T~rkI~nwr~----------------~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  377 IMYEMLVGYPPFCSETPQE----TYRKIVNWRE----------------TLKFPEEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             HHHHHHhCCCCCCCCCHHH----HHHHHHHHhh----------------hccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            9999999999997433211    0011111111                11111123456899999999999 9999998


Q ss_pred             hHHHHHHHHHHHHHhhhhhhhcCCCccee
Q 016850          347 MRQVTGLVSKMYLESKNWADKIGFPTDFS  375 (381)
Q Consensus       347 ~~evl~~L~~~~~~~~~~~~~~~~~~~~~  375 (381)
                      ..-+-+.-++-+.+..+|+.+.+.++-+-
T Consensus       436 ~~G~~EIK~HPfF~~v~W~~l~~~~apfv  464 (550)
T KOG0605|consen  436 SKGAEEIKKHPFFKGVDWDHLREMPAPFV  464 (550)
T ss_pred             cccHHHHhcCCccccCCcchhhcCCCCCC
Confidence            77777777788999999999988876543

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2.9e-39  Score=295.58  Aligned_cols=243  Identities=17%  Similarity=0.213  Sum_probs=183.6

Q ss_pred             CceeeHHHHHHHhcCCcccccccCCCceEEEEEECCceEEEEEeccccccc---HHHHHHHHHHHhhcCCCCcceEEEEE
Q 016850           80 PHIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLD---LEQLRERLSVICRSHHSSLIKLLGAC  156 (381)
Q Consensus        80 ~~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~  156 (381)
                      ...++.+++...    ....||+|++|.||+|.++++.||||+........   .+.+.+|+.+|++++|||||+++|++
T Consensus        12 ~~~i~~~~i~~~----~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~   87 (283)
T PHA02988         12 IKCIESDDIDKY----TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFI   87 (283)
T ss_pred             ceecCHHHcCCC----CCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeE
Confidence            344556666211    23457999999999999999999999876543332   46788999999999999999999998


Q ss_pred             Ee----CCeeeEEEeccCCCCHHHHhcCCCCCCccchHH------------------HHHHhhhcceeecccCCCccceE
Q 016850          157 VS----GNCGYLVYEHVSGANLADCLRNPRNPSFTVLST------------------WLSRMQSSSIIVSEENAGSLCAK  214 (381)
Q Consensus       157 ~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~------------------~~~~l~~~Nill~~~~~~~~~~k  214 (381)
                      .+    ...+++||||+++|+|.+++.......+.....                  .|++|+|+||+++++    +.+|
T Consensus        88 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~----~~~k  163 (283)
T PHA02988         88 IDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN----YKLK  163 (283)
T ss_pred             EecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCC----CcEE
Confidence            77    346899999999999999998765544332221                  244677999999987    5699


Q ss_pred             EcccccccccccCCCCccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          215 ICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       215 l~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      |+|||+++.+..       ......|+..|+|||++.+  ..++.++|||||||++|||++|+.||.....         
T Consensus       164 l~dfg~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---------  227 (283)
T PHA02988        164 IICHGLEKILSS-------PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---------  227 (283)
T ss_pred             EcccchHhhhcc-------ccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---------
Confidence            999999986432       1123568999999999876  6789999999999999999999999964211         


Q ss_pred             hHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          293 SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                        .+.....           .........+..+++.+.+|+.+||+.||.+|||+.|+++.|+.++.
T Consensus       228 --~~~~~~i-----------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        228 --KEIYDLI-----------INKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             --HHHHHHH-----------HhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence              1111111           11111222343567889999999999999999999999999998764

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.7e-41  Score=288.71  Aligned_cols=238  Identities=17%  Similarity=0.182  Sum_probs=175.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..++|+|+||+||+++++  |+-||||++.-..+.  -.+-..||+++|++|+|+|+|.++++|.....++||+|||+ .
T Consensus         7 LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~d-h   85 (396)
T KOG0593|consen    7 LGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCD-H   85 (396)
T ss_pred             hhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecc-h
Confidence            357899999999999996  788999987654443  24556899999999999999999999999999999999996 5


Q ss_pred             CHHHHhcCCC-CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      ++.+.|.... ..+.+.+.                 .+|+||||+|||+...    +++||||||+|+.+..    ....
T Consensus        86 TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~----gvvKLCDFGFAR~L~~----pgd~  157 (396)
T KOG0593|consen   86 TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN----GVVKLCDFGFARTLSA----PGDN  157 (396)
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC----CcEEeccchhhHhhcC----Ccch
Confidence            6666665533 33322221                 3466888999999987    6699999999998743    3334


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH----------c
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV----------A  303 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~----------~  303 (381)
                      .+..+.|.+|+|||.+.+ .+|+..+||||+||++.||++|++.|+...+-        ..+..+...+          .
T Consensus       158 YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi--------DQLy~I~ktLG~L~prhq~iF  229 (396)
T KOG0593|consen  158 YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI--------DQLYLIRKTLGNLIPRHQSIF  229 (396)
T ss_pred             hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH--------HHHHHHHHHHcccCHHHHHHh
Confidence            566889999999998887 68999999999999999999999999865432        1122222111          1


Q ss_pred             CCccchhhhhcccc------cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRL------KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....-+..+.-+..      ...+ +.++.-+.+|++.||+.||++|++.++++.
T Consensus       230 ~~N~~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  230 SSNPFFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ccCCceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            11111111111111      1111 345668999999999999999999999973

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-40  Score=308.89  Aligned_cols=226  Identities=19%  Similarity=0.290  Sum_probs=183.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      -++||+|+.|.||.++..  ++.||||++.+......+-+.+|+.+|+.++|+|||.+++.|...+.+|+|||||+||+|
T Consensus       278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL  357 (550)
T KOG0578|consen  278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL  357 (550)
T ss_pred             hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence            368999999999999874  788999999888888888899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+.+.... +.+.+++                 .+|+|||..|||+..+    +.+||+|||++..+..    ......+
T Consensus       358 TDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~----g~vKltDFGFcaqi~~----~~~KR~T  428 (550)
T KOG0578|consen  358 TDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD----GSVKLTDFGFCAQISE----EQSKRST  428 (550)
T ss_pred             hhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC----CcEEEeeeeeeecccc----ccCcccc
Confidence            99998754 3333322                 3455778888888887    4599999999987643    2235667


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      .+|||.|||||++....|++++|||||||+++||+-|++||-...          .+.. .+.+..          ....
T Consensus       429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~----------PlrA-lyLIa~----------ng~P  487 (550)
T KOG0578|consen  429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN----------PLRA-LYLIAT----------NGTP  487 (550)
T ss_pred             ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC----------hHHH-HHHHhh----------cCCC
Confidence            899999999999999999999999999999999999999985311          1111 111111          1112


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..+++.+++|+.+||+.|+.+|++|.|+|+
T Consensus       488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            23346778999999999999999999999999975

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-40  Score=298.16  Aligned_cols=233  Identities=20%  Similarity=0.327  Sum_probs=178.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC--eeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN--CGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||++.+.  |...|||..........+.+.+|+.+|++|+|||||+++|......  .++|+|||+++|
T Consensus        22 ~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~G  101 (313)
T KOG0198|consen   22 GKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGG  101 (313)
T ss_pred             hccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCC
Confidence            567999999999999986  6899999876664444677999999999999999999999754444  699999999999


Q ss_pred             CHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++...+ .+++..+..+                 |.||||+|||++..+   +.+||+|||+++.... .......
T Consensus       102 sL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~---~~~KlaDFG~a~~~~~-~~~~~~~  177 (313)
T KOG0198|consen  102 SLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSN---GDVKLADFGLAKKLES-KGTKSDS  177 (313)
T ss_pred             cHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCC---CeEEeccCcccccccc-ccccccc
Confidence            9999999876 4554444332                 336679999998831   5699999999987542 1122233


Q ss_pred             ccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....||+.|||||++..+. ...++|||||||++.||+||++||....          ....+           +..+.
T Consensus       178 ~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~----------~~~~~-----------~~~ig  236 (313)
T KOG0198|consen  178 ELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF----------EEAEA-----------LLLIG  236 (313)
T ss_pred             cccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc----------chHHH-----------HHHHh
Confidence            45688999999999998643 3469999999999999999999986320          01111           11111


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      .....+..|...++++++|+.+|+..||++||||.++|+..
T Consensus       237 ~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  237 REDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             ccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            12233456777889999999999999999999999997644

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5.1e-40  Score=304.27  Aligned_cols=224  Identities=18%  Similarity=0.268  Sum_probs=182.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||||+.+  .+.||+|.+......  +.+.+.+|++|+++|+|||||.++++|+...++|+|.|||. 
T Consensus         6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~-   84 (808)
T KOG0597|consen    6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAV-   84 (808)
T ss_pred             HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhh-
Confidence            3467999999999999986  567888876443322  46779999999999999999999999999999999999996 


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|..+|...+.+++.++..+                 +++++|.|||++..    +++|+||||+|+....    ....
T Consensus        85 g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~----~~~KlcdFg~Ar~m~~----~t~v  156 (808)
T KOG0597|consen   85 GDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG----GTLKLCDFGLARAMST----NTSV  156 (808)
T ss_pred             hhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC----Cceeechhhhhhhccc----Ccee
Confidence            599999999988887765433                 33567999999987    6799999999997543    3445


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .+...|||.|||||++.++.|+..+|+||+|||+||+++|++||...           .+...+..+.           .
T Consensus       157 ltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----------si~~Lv~~I~-----------~  214 (808)
T KOG0597|consen  157 LTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----------SITQLVKSIL-----------K  214 (808)
T ss_pred             eeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----------HHHHHHHHHh-----------c
Confidence            67789999999999999999999999999999999999999999531           2222222222           1


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .  ....|...+..++.|+...|.+||..|.+..+++.
T Consensus       215 d--~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  215 D--PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             C--CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            1  12345688999999999999999999999999865

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-40  Score=309.59  Aligned_cols=221  Identities=19%  Similarity=0.265  Sum_probs=183.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ++.||.|+.|.|-+|++.  |+.+|||++......   ....+.+||-||+.|.||||+++|++|++..++|+|.||+++
T Consensus        17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g   96 (786)
T KOG0588|consen   17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG   96 (786)
T ss_pred             cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence            678999999999999995  899999987655322   466789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.|+++|...+.++++.+..++                 +||||+|+||+..+    .|||+|||+|.+-     .....
T Consensus        97 GELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~----nIKIADFGMAsLe-----~~gkl  167 (786)
T KOG0588|consen   97 GELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN----NIKIADFGMASLE-----VPGKL  167 (786)
T ss_pred             chhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc----CEeeeccceeecc-----cCCcc
Confidence            9999999998888766654443                 46779999999874    4999999999762     33345


Q ss_pred             ccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ..+.||.|+|.|||++.|..| +.++||||+|||||.|+||+.||++                          +++..++
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------------------------dNir~LL  221 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------------------------DNIRVLL  221 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------------------------ccHHHHH
Confidence            678999999999999999988 5899999999999999999999962                          1122221


Q ss_pred             ccccc--CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+-..  .++|..++.++.+|+.+||..||.+|.|++||++
T Consensus       222 lKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  222 LKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             HHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence            11111  2357789999999999999999999999999965

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-40  Score=295.57  Aligned_cols=237  Identities=16%  Similarity=0.222  Sum_probs=180.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.|.-++||+|++.  +..||||++.+.... +.+.+.+|+..|+.++|||||+++..|..+..+|+||.||.+|+
T Consensus        31 ~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS  110 (516)
T KOG0582|consen   31 QEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGS  110 (516)
T ss_pred             EEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCc
Confidence            466999999999999984  889999999887766 46899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC--CCCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          174 LADCLRNPR--NPSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       174 L~~~l~~~~--~~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +.+.|+..-  .+.+..                 ...+|++||+.|||++++    +.|||+|||++..+.... .+...
T Consensus       111 ~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~d----G~VkLadFgvsa~l~~~G-~R~~~  185 (516)
T KOG0582|consen  111 LLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSD----GTVKLADFGVSASLFDSG-DRQVT  185 (516)
T ss_pred             HHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCC----CcEEEcCceeeeeecccC-ceeeE
Confidence            999998632  233222                 224556888999999999    669999999987765433 22222


Q ss_pred             c-cccCCCccccchhhhc--CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          235 V-NKIEGTRGYMAPEFQA--SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       235 ~-~~~~gt~~y~aPE~~~--~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      . +.++||+.|||||++.  ...|+.|+|||||||+..||.+|..||.....           ......-+.+.....  
T Consensus       186 rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP-----------mkvLl~tLqn~pp~~--  252 (516)
T KOG0582|consen  186 RFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP-----------MKVLLLTLQNDPPTL--  252 (516)
T ss_pred             eeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh-----------HHHHHHHhcCCCCCc--
Confidence            2 7789999999999854  34799999999999999999999999963211           111111111111100  


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .-..+..+.....+..+++++..||++||.+|||++++++
T Consensus       253 -~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  253 -LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             -ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence             0111112223345678999999999999999999999974

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-40  Score=309.54  Aligned_cols=255  Identities=20%  Similarity=0.304  Sum_probs=195.1

Q ss_pred             hhhcCCCCCceeeHHHHHHHhcCCcccccccCCCceEEEEEEC--Cc---e-EEEEEecccc---cccHHHHHHHHHHHh
Q 016850           72 LKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIR--GK---D-VIIFQRKLRR---SLDLEQLRERLSVIC  142 (381)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~--~~---~-v~vk~~~~~~---~~~~~~~~~E~~il~  142 (381)
                      ++.......+++..+++.      ..++||+|+||.||+|++.  +.   . ||+|..+...   .....++.+|.++|+
T Consensus       143 L~~PI~r~~Wel~H~~v~------l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr  216 (474)
T KOG0194|consen  143 LKRPIPRQKWELSHSDIE------LGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMR  216 (474)
T ss_pred             ecccccccccEEeccCcc------ccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHH
Confidence            444555566677766663      3488999999999999985  21   3 7787766423   335778999999999


Q ss_pred             hcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCC-CCccc-----------------hHHHHHHhhhcceeec
Q 016850          143 RSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRN-PSFTV-----------------LSTWLSRMQSSSIIVS  204 (381)
Q Consensus       143 ~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~-----------------~~~~~~~l~~~Nill~  204 (381)
                      +++|||||++||++.....++||||+|+||+|.++|+.... .+..+                 -..+|+||..+|+|++
T Consensus       217 ~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~  296 (474)
T KOG0194|consen  217 QLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS  296 (474)
T ss_pred             hCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec
Confidence            99999999999999999999999999999999999998763 33222                 1234567778888888


Q ss_pred             ccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCcccccccc
Q 016850          205 EENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFD  283 (381)
Q Consensus       205 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~  283 (381)
                      ..    ..+||+|||+++...    ..........-...|+|||.+..+.|+.++|||||||++||+++ |..||.....
T Consensus       297 ~~----~~vKISDFGLs~~~~----~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~  368 (474)
T KOG0194|consen  297 KK----GVVKISDFGLSRAGS----QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN  368 (474)
T ss_pred             CC----CeEEeCccccccCCc----ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH
Confidence            86    448999999997642    11111112346789999999999999999999999999999999 7888865432


Q ss_pred             CCcccccchhHHHHHHHHHcCCccchhhhh-cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          284 EGIDGYRRVSVVDKASEAVAGGVGGVRKWV-DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      .           +            +...+ ....+...+...+..+..++.+||..||++||+|.++.+.|+.++....
T Consensus       369 ~-----------~------------v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  369 Y-----------E------------VKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             H-----------H------------HHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            1           1            11112 3344445555677889999999999999999999999999999988755


Q ss_pred             h
Q 016850          363 N  363 (381)
Q Consensus       363 ~  363 (381)
                      +
T Consensus       426 ~  426 (474)
T KOG0194|consen  426 A  426 (474)
T ss_pred             c
Confidence            3

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-39  Score=300.32  Aligned_cols=259  Identities=21%  Similarity=0.304  Sum_probs=191.8

Q ss_pred             ceeeHHHHHHHhcCCcccccccCCCceEEEEEECCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEe
Q 016850           81 HIYHLSEICAATNNFLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVS  158 (381)
Q Consensus        81 ~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~  158 (381)
                      +.+.++++.      ....||+|.||+||+|+|- +.||||+++.....  ..+.|++|+.++++-+|.||+-+.|+|..
T Consensus       387 WeIp~~ev~------l~~rIGsGsFGtV~Rg~wh-GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  387 WEIPPEEVL------LGERIGSGSFGTVYRGRWH-GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             cccCHHHhh------ccceeccccccceeecccc-cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            345555553      4678999999999999995 47899998765544  57889999999999999999999999998


Q ss_pred             CCeeeEEEeccCCCCHHHHhcCCCC-CC-----------------ccchHHHHHHhhhcceeecccCCCccceEEccccc
Q 016850          159 GNCGYLVYEHVSGANLADCLRNPRN-PS-----------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       159 ~~~~~lv~e~~~~gsL~~~l~~~~~-~~-----------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      .+. .||+.+|+|-+|+.+|+..+. +.                 .+.-.++|+|||..||+++++    +.|||+|||+
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~----~kVkIgDFGL  534 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHED----LKVKIGDFGL  534 (678)
T ss_pred             Cce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccC----CcEEEecccc
Confidence            887 999999999999999986431 11                 122234566777888888886    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      +..-...  ..........|...|||||+++.   ..|++.+|||||||++|||++|..||.....+.+-.         
T Consensus       535 atvk~~w--~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif---------  603 (678)
T KOG0193|consen  535 ATVKTRW--SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF---------  603 (678)
T ss_pred             eeeeeee--ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE---------
Confidence            9754322  12223445668999999998874   468999999999999999999999997332221110         


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCc
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPT  372 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~  372 (381)
                         .+..  +    +..++.. .....+++++++|+..||..++++||.+.+|+..|++++......+...+.|.
T Consensus       604 ---mVGr--G----~l~pd~s-~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~RS~S~P~  668 (678)
T KOG0193|consen  604 ---MVGR--G----YLMPDLS-KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINRSASEPV  668 (678)
T ss_pred             ---Eecc--c----ccCccch-hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccccCcCccc
Confidence               0000  0    0001110 11235678999999999999999999999999999999886555555555543

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-40  Score=300.63  Aligned_cols=235  Identities=21%  Similarity=0.240  Sum_probs=175.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccccc-HHHHHHHHHHHhhcC-CCCcceEEEEEEeCC-eeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD-LEQLRERLSVICRSH-HSSLIKLLGACVSGN-CGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~-~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~-~~~lv~e~~~  170 (381)
                      ..++||.|+||.||+|+..  +..||||+.+.+-... .-.-.||++.|++|. |||||+|.+++.+.+ ++++|||||+
T Consensus        14 ~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md   93 (538)
T KOG0661|consen   14 VIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD   93 (538)
T ss_pred             HHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh
Confidence            3578999999999999874  8889998876554442 223468999999998 999999999999887 9999999995


Q ss_pred             CCCHHHHhcCCC-CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                       .+|.+++++++ .+.+..+.                 .+|+||||+|||+...    ..+||+|||+||.+.     ..
T Consensus        94 -~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~----~~iKiaDFGLARev~-----Sk  163 (538)
T KOG0661|consen   94 -CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGN----DVIKIADFGLAREVR-----SK  163 (538)
T ss_pred             -hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccc----ceeEecccccccccc-----cC
Confidence             89999999874 33333333                 2455778999999864    559999999998753     23


Q ss_pred             ccccccCCCccccchhhhc-CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH--cCCc--c
Q 016850          233 GKVNKIEGTRGYMAPEFQA-SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV--AGGV--G  307 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~  307 (381)
                      ...+..+.|.+|+|||++. .+.|+.+.||||+|||++|+.+-++.|++..+           .|++.++.  .|..  .
T Consensus       164 pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE-----------~Dqi~KIc~VLGtP~~~  232 (538)
T KOG0661|consen  164 PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE-----------IDQIYKICEVLGTPDKD  232 (538)
T ss_pred             CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH-----------HHHHHHHHHHhCCCccc
Confidence            3566788999999999764 67899999999999999999999999986433           22222221  1100  0


Q ss_pred             chhh--------------hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 GVRK--------------WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ~~~~--------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+.+              ...-.+....+ .++.++.+||.+||.+||++||||.++++
T Consensus       233 ~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  233 SWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             cchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence            0111              01111111123 37889999999999999999999999965

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=5e-39  Score=276.81  Aligned_cols=246  Identities=20%  Similarity=0.265  Sum_probs=193.7

Q ss_pred             eeHHHHHHHhcCCcccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEE
Q 016850           83 YHLSEICAATNNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACV  157 (381)
Q Consensus        83 ~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~  157 (381)
                      ++++|.+      ..+.||.|+||+|.+++.+  +..+|+|+.....-.   ..+...+|..+|+.+.||++|++++.|.
T Consensus        41 ~~l~dfe------~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~  114 (355)
T KOG0616|consen   41 YSLQDFE------RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK  114 (355)
T ss_pred             cchhhhh------heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec
Confidence            7777764      2467999999999999986  788999987554433   3566788999999999999999999999


Q ss_pred             eCCeeeEEEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccccc
Q 016850          158 SGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       158 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      +.+.+|+||||++||.|+.+|+..+++++..++.+.                 +||||+|||+|..    +.+||+|||+
T Consensus       115 d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~----G~iKitDFGF  190 (355)
T KOG0616|consen  115 DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQN----GHIKITDFGF  190 (355)
T ss_pred             cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccC----CcEEEEeccc
Confidence            999999999999999999999998888766654433                 3667999999998    6799999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      |+.+..       ..-+.||||.|+|||+++...|+.++|.|||||++|||+.|.+||.....           ..-   
T Consensus       191 AK~v~~-------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----------~~i---  249 (355)
T KOG0616|consen  191 AKRVSG-------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----------IQI---  249 (355)
T ss_pred             eEEecC-------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----------HHH---
Confidence            987532       35679999999999999999999999999999999999999999974322           111   


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-ChH-HHHHHHHHHHHHhhhhhhhcC
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-DMR-QVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~-evl~~L~~~~~~~~~~~~~~~  369 (381)
                              +.+++...  -.+|...+.++++|+..+|+.|-.+|. ++. -+.+...+-+....+|+....
T Consensus       250 --------Y~KI~~~~--v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~  310 (355)
T KOG0616|consen  250 --------YEKILEGK--VKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQ  310 (355)
T ss_pred             --------HHHHHhCc--ccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhh
Confidence                    11222222  346788899999999999999999993 333 233333344455566665543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.9e-39  Score=275.54  Aligned_cols=239  Identities=18%  Similarity=0.187  Sum_probs=178.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc--HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD--LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|.||.||+|++.  |+.||||+++.....+  .....|||+.|+.++|+||+.++++|-..+.+.||+|||+ .
T Consensus         7 ~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-t   85 (318)
T KOG0659|consen    7 LEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-T   85 (318)
T ss_pred             hhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-c
Confidence            467999999999999984  8999999988765442  3457899999999999999999999999999999999996 7


Q ss_pred             CHHHHhcCCCCCC------------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRNPS------------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~~~------------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|...|++....-                  .+.....|+||||.|+|+.++    +.+||+|||+|+.+....    ..
T Consensus        86 dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~----g~lKiADFGLAr~f~~p~----~~  157 (318)
T KOG0659|consen   86 DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD----GQLKIADFGLARFFGSPN----RI  157 (318)
T ss_pred             cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC----CcEEeecccchhccCCCC----cc
Confidence            9999998865321                  111224467889999999998    669999999999876422    22


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc-------CCc
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA-------GGV  306 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  306 (381)
                      ....+-|.+|+|||++.| ..|+..+||||.|||+.||+.|.+.|++..+-        ..+..+...+.       .+.
T Consensus       158 ~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi--------dQL~~If~~LGTP~~~~WP~~  229 (318)
T KOG0659|consen  158 QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI--------DQLSKIFRALGTPTPDQWPEM  229 (318)
T ss_pred             cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH--------HHHHHHHHHcCCCCcccCccc
Confidence            333478999999998886 46999999999999999999999999754331        11111111110       000


Q ss_pred             cchhhhhccc-----ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRR-----LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+.++.+-.     ........++.++.||+.+||..||.+|+++.|+++
T Consensus       230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            1111111111     111122346778899999999999999999999865

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-39  Score=325.23  Aligned_cols=237  Identities=21%  Similarity=0.318  Sum_probs=182.9

Q ss_pred             ccccccCCCceEEEEEEC---Cc----eEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR---GK----DVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~~----~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ...||+|+||.||+|...   +.    .||+|.+.... .....+|.+|..+|++++|||||+++|++.+....+|++||
T Consensus       697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~ley  776 (1025)
T KOG1095|consen  697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEY  776 (1025)
T ss_pred             eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehh
Confidence            456899999999999984   32    36666654332 33678899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCC-------ccchH-----------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          169 VSGANLADCLRNPRNPS-------FTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~-------~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      |++|+|..||++.+...       ...++                 .+|+||..+|+||+..    .++||+|||+|+.+
T Consensus       777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~----r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER----RVVKIADFGLARDI  852 (1025)
T ss_pred             cccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc----CcEEEcccchhHhh
Confidence            99999999999863221       11121                 2455777999999998    67999999999954


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..  .++........-...|||||.+..+.++.++|||||||++||++| |..||....+.           +....   
T Consensus       853 y~--~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-----------~v~~~---  916 (1025)
T KOG1095|consen  853 YD--KDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-----------EVLLD---  916 (1025)
T ss_pred             hh--chheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH-----------HHHHH---
Confidence            22  122222222234579999999999999999999999999999999 88888644321           11111   


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                              +.... +.+.|..|+..+.++|.+||+.+|++||++..|++.+..+....+
T Consensus       917 --------~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~  966 (1025)
T KOG1095|consen  917 --------VLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL  966 (1025)
T ss_pred             --------HHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence                    11222 455678899999999999999999999999999999998877654

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-40  Score=312.13  Aligned_cols=266  Identities=18%  Similarity=0.240  Sum_probs=209.0

Q ss_pred             eeeHHHHHHHhcCCc----------ccccccCCCceEEEEEEC--C---ceEEEEEecccccc-cHHHHHHHHHHHhhcC
Q 016850           82 IYHLSEICAATNNFL----------AKKFTSSSASASWRGTIR--G---KDVIIFQRKLRRSL-DLEQLRERLSVICRSH  145 (381)
Q Consensus        82 ~~~~~~~~~~~~~f~----------~~~lg~G~~g~V~~~~~~--~---~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~  145 (381)
                      .++|+|-.++...|.          ++.||.|.||.|++|+++  +   ..||||.++.-... .+.+|..|+.||.+++
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            466777777766653          456899999999999985  3   46777775443222 4678999999999999


Q ss_pred             CCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCC-Cccc-----------------hHHHHHHhhhcceeecccC
Q 016850          146 HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP-SFTV-----------------LSTWLSRMQSSSIIVSEEN  207 (381)
Q Consensus       146 h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~-----------------~~~~~~~l~~~Nill~~~~  207 (381)
                      ||||++|.|+.......+||.|||++|+|+.||..+... ..-|                 ....|+||...|||++.+ 
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn-  767 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN-  767 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc-
Confidence            999999999999999999999999999999999886543 1111                 224567888999999997 


Q ss_pred             CCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCc
Q 016850          208 AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGI  286 (381)
Q Consensus       208 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~  286 (381)
                         +++|++|||+++.+.+..... ......+-...|.|||.+...+++.++|||||||++||.++ |+.||..+.+   
T Consensus       768 ---LvCKVsDFGLSRvledd~~~~-ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN---  840 (996)
T KOG0196|consen  768 ---LVCKVSDFGLSRVLEDDPEAA-YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---  840 (996)
T ss_pred             ---eEEEeccccceeecccCCCcc-ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---
Confidence               889999999999875433111 11222333579999999999999999999999999999877 9999876544   


Q ss_pred             ccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhh
Q 016850          287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~  366 (381)
                                          .++.+.+...++.+.|..++..|..||..||++|-.+||.+.+|+..|.+++.....-..
T Consensus       841 --------------------QdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~  900 (996)
T KOG0196|consen  841 --------------------QDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKT  900 (996)
T ss_pred             --------------------HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcc
Confidence                                224444566677777889999999999999999999999999999999999887665555


Q ss_pred             hcCCCccee
Q 016850          367 KIGFPTDFS  375 (381)
Q Consensus       367 ~~~~~~~~~  375 (381)
                      ..+.....+
T Consensus       901 ~~~~~~r~s  909 (996)
T KOG0196|consen  901 IAPESPRPS  909 (996)
T ss_pred             cCCCCCCCc
Confidence            555444443

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-38  Score=293.14  Aligned_cols=225  Identities=21%  Similarity=0.264  Sum_probs=178.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc----cc-ccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR----RS-LDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~----~~-~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||+|++|.+.  +..||+|++...    .. ...+.+.+|+.++++++ ||||+++++++.....+++|||
T Consensus        21 ~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmE  100 (370)
T KOG0583|consen   21 LGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVME  100 (370)
T ss_pred             eeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEE
Confidence            4678999999999999884  789999965443    11 23556778999999998 9999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ||.||+|.++|.+.+.+.+..+..                 +|+||||+|||++.+.   .++||+|||++....    .
T Consensus       101 y~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~---~~~Kl~DFG~s~~~~----~  173 (370)
T KOG0583|consen  101 YCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE---GNLKLSDFGLSAISP----G  173 (370)
T ss_pred             ecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC---CCEEEeccccccccC----C
Confidence            999999999999966665544332                 3457789999999873   459999999998752    2


Q ss_pred             ccccccccCCCccccchhhhcCCC-CC-cchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGV-VT-QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                      ......+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||....           .......+       
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-----------~~~l~~ki-------  235 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-----------VPNLYRKI-------  235 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-----------HHHHHHHH-------
Confidence            344567899999999999999876 75 88999999999999999999997411           11111111       


Q ss_pred             hhhhhcccccCCCCHHH-HHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          309 VRKWVDRRLKDSYPVEV-AEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                          ...  ...+|..+ ++++..|+.+||..||.+|+++.+|+
T Consensus       236 ----~~~--~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  236 ----RKG--EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             ----hcC--CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence                111  12234445 88999999999999999999999997

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-38  Score=288.92  Aligned_cols=239  Identities=18%  Similarity=0.224  Sum_probs=178.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~  170 (381)
                      .++||+|.||.||+|+..  |+.||+|+++.....  ...-..|||.||++|+||||++|.+...+.  ..+|||+|||+
T Consensus       122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd  201 (560)
T KOG0600|consen  122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD  201 (560)
T ss_pred             HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc
Confidence            468999999999999984  788999998776633  466788999999999999999999998875  78999999996


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                       .||.-++.... .+...++..                 .|+|||.+|||++.+    +++||+|||||+++..   ...
T Consensus       202 -hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~----G~LKiaDFGLAr~y~~---~~~  273 (560)
T KOG0600|consen  202 -HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNN----GVLKIADFGLARFYTP---SGS  273 (560)
T ss_pred             -chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCC----CCEEeccccceeeccC---CCC
Confidence             79999988743 344444332                 345677888888887    6799999999998543   344


Q ss_pred             ccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch-h
Q 016850          233 GKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV-R  310 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  310 (381)
                      ...+..+-|++|+|||++.|. .|+.++|+||.||||.||++|++.|+...+        +..++.+.+....-.+.. .
T Consensus       274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE--------veQl~kIfklcGSP~e~~W~  345 (560)
T KOG0600|consen  274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE--------VEQLHKIFKLCGSPTEDYWP  345 (560)
T ss_pred             cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH--------HHHHHHHHHHhCCCChhccc
Confidence            456778899999999998875 699999999999999999999999975433        222333333322111111 1


Q ss_pred             -------hhhcc------cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 -------KWVDR------RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 -------~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             ..+.+      .+... ....+....+|+..+|..||.+|.||.++|+
T Consensus       346 ~~kLP~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  346 VSKLPHATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cccCCcccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence                   00111      01100 1234567899999999999999999998864

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.8e-38  Score=280.35  Aligned_cols=243  Identities=20%  Similarity=0.251  Sum_probs=187.5

Q ss_pred             ccccccCCCceEEEEEECC--ceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIRG--KDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~--~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||.|.-|+||++.+++  ..+|+|++....-.   ...+...|.+||+.++||.++.||+.|+.++..|+|||||+|
T Consensus        82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpG  161 (459)
T KOG0610|consen   82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPG  161 (459)
T ss_pred             HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCC
Confidence            3679999999999999985  78899986543332   345567799999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCC--CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCC----
Q 016850          172 ANLADCLRNPRN--PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS----  228 (381)
Q Consensus       172 gsL~~~l~~~~~--~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~----  228 (381)
                      |+|..+++.+..  +++..+.                 ++.+||||+|||++++    ++|.|+||.|+..+....    
T Consensus       162 GdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvred----GHIMLsDFDLS~~~~~~Pt~~~  237 (459)
T KOG0610|consen  162 GDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVRED----GHIMLSDFDLSLRCPVSPTLVK  237 (459)
T ss_pred             ccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecC----CcEEeeeccccccCCCCCeeec
Confidence            999999987643  3322222                 2235788999999998    779999999986542100    


Q ss_pred             ---------------------------CCc---------------------cccccccCCCccccchhhhcCCCCCcchh
Q 016850          229 ---------------------------GNE---------------------SGKVNKIEGTRGYMAPEFQASGVVTQKCD  260 (381)
Q Consensus       229 ---------------------------~~~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sD  260 (381)
                                                 ...                     ......++||-.|+|||++.+...+.++|
T Consensus       238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD  317 (459)
T KOG0610|consen  238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD  317 (459)
T ss_pred             cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence                                       000                     01224578999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccC
Q 016850          261 VYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDED  340 (381)
Q Consensus       261 IwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d  340 (381)
                      .|+|||++|||+.|.-||......                      ..+..++.+.+.-...+.++..++|||+++|.+|
T Consensus       318 WWtfGIflYEmLyG~TPFKG~~~~----------------------~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKd  375 (459)
T KOG0610|consen  318 WWTFGIFLYEMLYGTTPFKGSNNK----------------------ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKD  375 (459)
T ss_pred             HHHHHHHHHHHHhCCCCcCCCCch----------------------hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccC
Confidence            999999999999999999865432                      3344444444443333467889999999999999


Q ss_pred             CCCCCC-hHHHHHHHHHHHHHhhhhh
Q 016850          341 PGKRPD-MRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       341 P~~RPs-~~evl~~L~~~~~~~~~~~  365 (381)
                      |.+|.. ..-+.+.=++-+.+.++|+
T Consensus       376 P~kRlg~~rGA~eIK~HpFF~gVnWa  401 (459)
T KOG0610|consen  376 PSKRLGSKRGAAEIKRHPFFEGVNWA  401 (459)
T ss_pred             hhhhhccccchHHhhcCccccCCChh
Confidence            999987 2233333457789999998

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-39  Score=281.24  Aligned_cols=223  Identities=19%  Similarity=0.271  Sum_probs=181.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ..+||+|+||.||++.++  |+.+|||++  ..+.+.+++.+|+.||++++.|++|++||.|.....+|||||||--|++
T Consensus        38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~V--PV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSi  115 (502)
T KOG0574|consen   38 VGKLGEGSYGSVHKAIHRESGHVLAIKKV--PVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSI  115 (502)
T ss_pred             HHHhcCCcchHHHHHHHhccCcEEEEEec--CccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcH
Confidence            468999999999999986  778888874  4456789999999999999999999999988888889999999999999


Q ss_pred             HHHhcCCCC-CC-----------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPRN-PS-----------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~~-~~-----------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+.+..++. +.                 .+.+..+|++||..||||+-+    ++.||+|||+|-.+.+    .-...+
T Consensus       116 SDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~----G~AKLADFGVAGQLTD----TMAKRN  187 (502)
T KOG0574|consen  116 SDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD----GIAKLADFGVAGQLTD----TMAKRN  187 (502)
T ss_pred             HHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc----chhhhhhccccchhhh----hHHhhC
Confidence            999986543 22                 223445678899999999998    6699999999987532    334567


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      +..|||.|||||++..-.|++++||||||++..||..|++||.....-     ..                  .-++...
T Consensus       188 TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-----RA------------------IFMIPT~  244 (502)
T KOG0574|consen  188 TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-----RA------------------IFMIPTK  244 (502)
T ss_pred             ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-----ce------------------eEeccCC
Confidence            789999999999999999999999999999999999999999643220     00                  0001111


Q ss_pred             --ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 --LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 --~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        -.-.-|..++.++.++++.||.+.|++|-|+-++++
T Consensus       245 PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  245 PPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             CCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence              111236778999999999999999999999988875

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.1e-37  Score=292.55  Aligned_cols=237  Identities=21%  Similarity=0.303  Sum_probs=172.5

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeC-CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSG-NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~-~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.       ++.||+|+....... ..+.+.+|+.+|.++ +|||||++++++... +.+++|
T Consensus        11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv   90 (338)
T cd05102          11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVI   90 (338)
T ss_pred             eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEE
Confidence            3577999999999999752       357888886543222 346789999999999 899999999988764 468999


Q ss_pred             EeccCCCCHHHHhcCCCC--------------------------------------------------------------
Q 016850          166 YEHVSGANLADCLRNPRN--------------------------------------------------------------  183 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~--------------------------------------------------------------  183 (381)
                      |||+++|+|.++|.....                                                              
T Consensus        91 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (338)
T cd05102          91 VEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSP  170 (338)
T ss_pred             EecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCC
Confidence            999999999999975321                                                              


Q ss_pred             CCcc-------chHH----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccccc
Q 016850          184 PSFT-------VLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMA  246 (381)
Q Consensus       184 ~~~~-------~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~a  246 (381)
                      ....       +++.          +|+||||+|||++.+    ..+||+|||+++.+...  ..........+++.|+|
T Consensus       171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~----~~~kl~DfG~a~~~~~~--~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN----NVVKICDFGLARDIYKD--PDYVRKGSARLPLKWMA  244 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC----CcEEEeecccccccccC--cchhcccCCCCCccccC
Confidence            1111       1222          234677889988876    56999999999864221  11111223456789999


Q ss_pred             hhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHH
Q 016850          247 PEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEV  325 (381)
Q Consensus       247 PE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (381)
                      ||++.+..++.++|||||||++|||++ |..||......           ......+.           .......+..+
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-----------~~~~~~~~-----------~~~~~~~~~~~  302 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-----------EEFCQRLK-----------DGTRMRAPENA  302 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-----------HHHHHHHh-----------cCCCCCCCCCC
Confidence            999988899999999999999999997 99999643210           00111111           11111223345


Q ss_pred             HHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          326 AEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       326 ~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ++.+.+|+.+||+.||++||++.++++.|++++.+
T Consensus       303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            67899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-38  Score=295.46  Aligned_cols=234  Identities=20%  Similarity=0.301  Sum_probs=190.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+||.|.||.||.|.|+  .-.||||.+  +.+. ..++|..|..+|+.++|||+|+|+|+|..+..+|||+|||..|+
T Consensus       272 khKLGGGQYGeVYeGvWKkyslTvAVKtL--KEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGN  349 (1157)
T KOG4278|consen  272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGN  349 (1157)
T ss_pred             eeccCCCcccceeeeeeeccceeeehhhh--hhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCcc
Confidence            457999999999999998  456666653  3333 67899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCcc-------------------chHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          174 LADCLRNPRNPSFT-------------------VLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       174 L~~~l~~~~~~~~~-------------------~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.+||.+.......                   ....+|+||...|+|+.+++    .||++||||+++...   +....
T Consensus       350 LLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh----iVKvADFGLsRlMtg---DTYTA  422 (1157)
T KOG4278|consen  350 LLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH----IVKVADFGLSRLMTG---DTYTA  422 (1157)
T ss_pred             HHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc----eEEeeccchhhhhcC---Cceec
Confidence            99999875533211                   11235678889999999984    599999999998532   33334


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....-.+.|.|||-+....++.++|||+|||+|||+.| |-.||+...           +            -.+..++
T Consensus       423 HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----------l------------SqVY~LL  479 (1157)
T KOG4278|consen  423 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------L------------SQVYGLL  479 (1157)
T ss_pred             ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----------H------------HHHHHHH
Confidence            445556789999999988899999999999999999998 677775432           1            2245556


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ...++.+.|..|++++.+||.+||+..|.+||+++|+-+.++.++.++-
T Consensus       480 EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sS  528 (1157)
T KOG4278|consen  480 EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSS  528 (1157)
T ss_pred             hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccc
Confidence            6777777788999999999999999999999999999999999976543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-38  Score=278.25  Aligned_cols=240  Identities=18%  Similarity=0.252  Sum_probs=176.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEec--ccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe-----CCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRK--LRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS-----GNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~--~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~~~~lv~e  167 (381)
                      .+.||.|+||.|+.+...  |..||||++.  .......++-.||+++|+.++|+||+.+++++..     -+.+|+|+|
T Consensus        27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e  106 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE  106 (359)
T ss_pred             cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence            478999999999999885  8899999986  4555577889999999999999999999999875     456899999


Q ss_pred             ccCCCCHHHHhcCCCCCCcc-----------------chHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFT-----------------VLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~-----------------~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +| +.+|.+.|+.+..+...                 .+..+|+||||.|++++.+    ..+||||||+|+.....  .
T Consensus       107 lM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~----c~lKI~DFGLAR~~~~~--~  179 (359)
T KOG0660|consen  107 LM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNAD----CDLKICDFGLARYLDKF--F  179 (359)
T ss_pred             HH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccC----CCEEeccccceeecccc--C
Confidence            99 58999999987644322                 2223445667777777776    45899999999986432  3


Q ss_pred             ccccccccCCCccccchhhhc-CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc---
Q 016850          231 ESGKVNKIEGTRGYMAPEFQA-SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV---  306 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  306 (381)
                      .....+..+.|.+|.|||++. ...|+.+.||||+|||+.||++|++-|++...-        ..+..+...+....   
T Consensus       180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v--------~Ql~lI~~~lGtP~~e~  251 (359)
T KOG0660|consen  180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYV--------HQLQLILELLGTPSEED  251 (359)
T ss_pred             cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchH--------HHHHHHHHhcCCCCHHH
Confidence            344557788999999999775 467999999999999999999999999754321        11111111111100   


Q ss_pred             ------cchhhhhc---cc----ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 ------GGVRKWVD---RR----LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ------~~~~~~~~---~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            +....++.   ..    +...+ ++..+.+.+|+.+||..||.+|+|++|+|+
T Consensus       252 l~~i~s~~ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  252 LQKIRSEKARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HHHhccHHHHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                  01111111   11    11112 256788999999999999999999998854

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.3e-38  Score=292.69  Aligned_cols=226  Identities=15%  Similarity=0.253  Sum_probs=183.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc--HHHHHHHHHHHhhcCCCCcceEEEEEEeCCe-eeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD--LEQLRERLSVICRSHHSSLIKLLGACVSGNC-GYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~lv~e~~~~  171 (381)
                      .+.+|+|+||.+++.+++  ++.+++|++.......  +....+|+.++++++|||||.+++.|..+++ ++|||+||+|
T Consensus         9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eG   88 (426)
T KOG0589|consen    9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEG   88 (426)
T ss_pred             hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCC
Confidence            577999999999888774  7899999988776553  4567899999999999999999999999888 9999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+.|.+.+  .+++..+..|                 |+|||++||++..++    .|||+|||+|+.++.    ..
T Consensus        89 g~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~----~VkLgDfGlaK~l~~----~~  160 (426)
T KOG0589|consen   89 GDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK----KVKLGDFGLAKILNP----ED  160 (426)
T ss_pred             CCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC----ceeecchhhhhhcCC----ch
Confidence            99999998765  3444444433                 346667888887774    389999999998753    22


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ....+.+||+.||+||++.+..|+.++|||||||++|||++-+++|....           ....+.+.           
T Consensus       161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----------m~~Li~ki-----------  218 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----------MSELILKI-----------  218 (426)
T ss_pred             hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----------hHHHHHHH-----------
Confidence            35677899999999999999999999999999999999999999997432           12221111           


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                       .+......|..++.++..||..||..+|..||++.++|..
T Consensus       219 -~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  219 -NRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             -hhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence             1222344577889999999999999999999999999876

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-37  Score=287.44  Aligned_cols=239  Identities=22%  Similarity=0.292  Sum_probs=185.4

Q ss_pred             ccccccCCCceEEEEEECC-ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .++||+|-||.|.++...+ ..||||+.+..... .+.+|.+|+++|.+|+|||||+|+|+|..++.+|+|+|||++|+|
T Consensus       543 ~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDL  622 (807)
T KOG1094|consen  543 KEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDL  622 (807)
T ss_pred             hhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcH
Confidence            6789999999999999986 89999997765554 458899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCC--c-------cc----------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPRNPS--F-------TV----------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~~~~--~-------~~----------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .++|.++....  .       .+          +...|++|.+.|+|++.+    +++||+|||.++.+.  ........
T Consensus       623 nqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e----~~iKiadfgmsR~ly--sg~yy~vq  696 (807)
T KOG1094|consen  623 NQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGE----FTIKIADFGMSRNLY--SGDYYRVQ  696 (807)
T ss_pred             HHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCc----ccEEecCcccccccc--cCCceeee
Confidence            99998874332  0       11          223455677999999987    889999999998652  22333333


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh--CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS--GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ...+-.+.|||||.+..++++.++|+|+||+++||+++  .+.||....++        ...+..-....+        -
T Consensus       697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--------~vven~~~~~~~--------~  760 (807)
T KOG1094|consen  697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--------QVVENAGEFFRD--------Q  760 (807)
T ss_pred             cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--------HHHHhhhhhcCC--------C
Confidence            45566889999999999999999999999999999865  67887643332        112211111111        1


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      ........|..++.++.++|.+||..|-++||+++++...|++.
T Consensus       761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            12223345677888999999999999999999999998877754

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=9.2e-37  Score=287.89  Aligned_cols=228  Identities=14%  Similarity=0.173  Sum_probs=165.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|++.  ++.||+|+....... ....+.+|+++|+.++|+|||++++++.+.+.+++||||+++|+
T Consensus        79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  158 (353)
T PLN00034         79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGS  158 (353)
T ss_pred             hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCc
Confidence            467999999999999985  789999987543332 35678999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCC---CccchH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCC
Q 016850          174 LADCLRNPRNP---SFTVLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEG  240 (381)
Q Consensus       174 L~~~l~~~~~~---~~~~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~g  240 (381)
                      |.+........   ...+++          .+|++|+|+|||++++    ..+||+|||+++.+...    ........|
T Consensus       159 L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~~~kL~DfG~~~~~~~~----~~~~~~~~g  230 (353)
T PLN00034        159 LEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSA----KNVKIADFGVSRILAQT----MDPCNSSVG  230 (353)
T ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC----CCEEEcccccceecccc----ccccccccc
Confidence            87643221110   011111          2345677999999876    56999999999875321    112234679


Q ss_pred             CccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          241 TRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       241 t~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      |..|+|||++..     ...+.++|||||||++|||++|+.||......        ........            +..
T Consensus       231 t~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--------~~~~~~~~------------~~~  290 (353)
T PLN00034        231 TIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--------DWASLMCA------------ICM  290 (353)
T ss_pred             CccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--------cHHHHHHH------------Hhc
Confidence            999999998742     23457899999999999999999999622110        00000000            001


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..++.++.+||.+||+.||++||++.|+++
T Consensus       291 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        291 SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1112233456778999999999999999999999976

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.7e-38  Score=280.42  Aligned_cols=222  Identities=16%  Similarity=0.224  Sum_probs=179.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|.||+|-+|+..  |+.||||.++..   ...+.-.+++||+||..|+||||+++|++|++.+.+.|||||..+
T Consensus        58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~  137 (668)
T KOG0611|consen   58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASG  137 (668)
T ss_pred             HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCC
Confidence            467999999999999873  899999976543   334566789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.|.+|+.+++.+++.....++                 +|||.+|||||++    +++||+|||++.++     .....
T Consensus       138 GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N----~NiKIADFGLSNly-----~~~kf  208 (668)
T KOG0611|consen  138 GELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQN----NNIKIADFGLSNLY-----ADKKF  208 (668)
T ss_pred             ccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCC----CCeeeeccchhhhh-----ccccH
Confidence            9999999998888766655444                 3667999999998    56999999999875     23345


Q ss_pred             ccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .+++||++.|.+||++.+..| ++.+|.|||||+||-|+.|..||+..+.           -..+.++..+         
T Consensus       209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----------k~lvrQIs~G---------  268 (668)
T KOG0611|consen  209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----------KRLVRQISRG---------  268 (668)
T ss_pred             HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----------HHHHHHhhcc---------
Confidence            678999999999999999888 6899999999999999999999974321           1112222111         


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .+.   .+..+.++.-||.+||..||++|.|+.+|..
T Consensus       269 --aYr---EP~~PSdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  269 --AYR---EPETPSDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             --ccc---CCCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence              111   1123446788999999999999999999864

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-37  Score=286.34  Aligned_cols=234  Identities=16%  Similarity=0.215  Sum_probs=177.2

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||+|+||.||+|+..  ++.||+|++....   ......+.+|+.+|.+++|||||++++++.+.+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999985  6789999875432   22456788899999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++..........+..                 +|++|+|+||+++.+    +.+||+|||+++....    .......
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~----~~~kl~Dfg~~~~~~~----~~~~~~~  152 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQ----GHIALCDFGLCKLNMK----DDDKTNT  152 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCC----CcEEEEECcccccCcc----CCCcccc
Confidence            99998766555443322                 234567899998876    5699999999875321    1122345


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      .+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........           ..  
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----------~~~~~~~~-----------~~--  208 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----------NEMYRKIL-----------QE--  208 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----------HHHHHHHH-----------cC--
Confidence            6799999999999988999999999999999999999999963211           11111111           11  


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhh
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~  365 (381)
                      ...++..+++.+.+|+.+||+.||.+||++..+.+.|++-+....+|.
T Consensus       209 ~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~  256 (312)
T cd05585         209 PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWK  256 (312)
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHH
Confidence            122344567889999999999999999987666666665555444443

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-37  Score=279.09  Aligned_cols=230  Identities=21%  Similarity=0.267  Sum_probs=172.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--------------cHHHHHHHHHHHhhcCCCCcceEEEEEEe-
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--------------DLEQLRERLSVICRSHHSSLIKLLGACVS-  158 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--------------~~~~~~~E~~il~~l~h~nIv~l~~~~~~-  158 (381)
                      ..+.||+|.||+|-+|+..  ++.||||++......              ..+++.+||.||++|+|||||+|+++..+ 
T Consensus       101 l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP  180 (576)
T KOG0585|consen  101 LIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDP  180 (576)
T ss_pred             hhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCc
Confidence            5788999999999999984  889999986432111              24689999999999999999999999886 


Q ss_pred             -CCeeeEEEeccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccc
Q 016850          159 -GNCGYLVYEHVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       159 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                       .+.+|||+|||..|.+...=....-+.+.++.                 .+|+||||+|+|++++    +++||+|||+
T Consensus       181 ~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~----g~VKIsDFGV  256 (576)
T KOG0585|consen  181 ESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD----GTVKISDFGV  256 (576)
T ss_pred             ccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC----CcEEeeccce
Confidence             46799999999998876543322213333333                 3456788999999998    6699999999


Q ss_pred             ccccccCCC-CccccccccCCCccccchhhhcCCC----CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHH
Q 016850          221 AELCGEVSG-NESGKVNKIEGTRGYMAPEFQASGV----VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       221 a~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      +..+..... +........+|||.|+|||.+.++.    .+.+.||||+||+||+|+.|+.||-...           .+
T Consensus       257 s~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~-----------~~  325 (576)
T KOG0585|consen  257 SNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF-----------EL  325 (576)
T ss_pred             eeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-----------HH
Confidence            987633211 1122334588999999999987632    3689999999999999999999995321           11


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                      +.           +.+++...+.-+..+.+.+.+++||.++|++||..|.+..+|.
T Consensus       326 ~l-----------~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik  370 (576)
T KOG0585|consen  326 EL-----------FDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIK  370 (576)
T ss_pred             HH-----------HHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhe
Confidence            11           2233333333333345788999999999999999999998884

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.2e-37  Score=279.61  Aligned_cols=229  Identities=22%  Similarity=0.349  Sum_probs=168.1

Q ss_pred             ccccccCCCceEEEEEEC------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||.|.||.||+|.+.      +..|+||........ ..+.+.+|++++++++||||++++|++...+..++|||||
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            457999999999999997      678899887543332 4688999999999999999999999999888899999999


Q ss_pred             CCCCHHHHhcCC--CCCCccchHHHHHH-----------------hhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          170 SGANLADCLRNP--RNPSFTVLSTWLSR-----------------MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       170 ~~gsL~~~l~~~--~~~~~~~~~~~~~~-----------------l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ++|+|.++|...  ..........|+.+                 |++.||+++++    +.+||+|||++......  .
T Consensus        84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~----~~~Kl~~f~~~~~~~~~--~  157 (259)
T PF07714_consen   84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSN----GQVKLSDFGLSRPISEK--S  157 (259)
T ss_dssp             TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETT----TEEEEESTTTGEETTTS--S
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccc--c
Confidence            999999999886  44444444444332                 33788888876    67999999999875211  1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........+...|+|||.+.+..++.++||||||+++|||++ |+.||......        .+.              
T Consensus       158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--------~~~--------------  215 (259)
T PF07714_consen  158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--------EII--------------  215 (259)
T ss_dssp             SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--------HHH--------------
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccc--------------
Confidence            1122334557889999999988889999999999999999999 67887532110        111              


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                       ..+........+..++..+.+++.+||..||++||++.++++.|
T Consensus       216 -~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  216 -EKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             -HHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             -ccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence             11112222334445677899999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.2e-36  Score=278.14  Aligned_cols=231  Identities=19%  Similarity=0.306  Sum_probs=173.8

Q ss_pred             ccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|...+       ..|++|........ ....+.+|++++++++||||+++++++.+.+..+++|||
T Consensus        10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~   89 (283)
T cd05048          10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY   89 (283)
T ss_pred             hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence            5679999999999998753       45788876543322 356789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC----------------CCccchHH-----------------HHHHhhhcceeecccCCCccceEE
Q 016850          169 VSGANLADCLRNPRN----------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~----------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl  215 (381)
                      +++|+|.+++.....                .....+..                 .|.+|+|+||+++++    ..+||
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~----~~~~L  165 (283)
T cd05048          90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG----LTVKI  165 (283)
T ss_pred             CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC----CcEEE
Confidence            999999999976422                11111111                 234677999999876    56999


Q ss_pred             cccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhH
Q 016850          216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~  294 (381)
                      +|||+++.....  ..........+++.|+|||.+.+..++.++|||||||++|||++ |..||......        . 
T Consensus       166 ~dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--------~-  234 (283)
T cd05048         166 SDFGLSRDIYSA--DYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--------E-  234 (283)
T ss_pred             CCCcceeecccc--ccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--------H-
Confidence            999999764221  11112234457889999999988889999999999999999998 99998632210        1 


Q ss_pred             HHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          295 VDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                                    +...+........+..+++.+.+|+.+||+.||++||++.+|++.|+.
T Consensus       235 --------------~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         235 --------------VIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --------------HHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                          111111222223345677899999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-37  Score=286.88  Aligned_cols=235  Identities=22%  Similarity=0.341  Sum_probs=186.3

Q ss_pred             ccccccCCCceEEEEEEC----Cce--EEEEEeccc-ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR----GKD--VIIFQRKLR-RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~----~~~--v~vk~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|-||.||+|.+.    |..  ||||..+.. ...+.+.|..|..+|++++|||||+|+|+|.+. ..|||||++
T Consensus       394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmEL~  472 (974)
T KOG4257|consen  394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVMELA  472 (974)
T ss_pred             HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEecc
Confidence            457899999999999983    444  555554332 223578899999999999999999999998875 479999999


Q ss_pred             CCCCHHHHhcCCCC-CCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPRN-PSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~~-~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +.|.|..||+.++. ++...                 ....|+||...|||+...    -.|||+|||+++.+.+   +.
T Consensus       473 ~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp----~CVKLaDFGLSR~~ed---~~  545 (974)
T KOG4257|consen  473 PLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSP----QCVKLADFGLSRYLED---DA  545 (974)
T ss_pred             cchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCc----ceeeecccchhhhccc---cc
Confidence            99999999998653 22111                 223567888999999887    4599999999998743   22


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ....+...-...|||||.+.-..++.++|||-|||++||++. |..||.+..+.                       .+.
T Consensus       546 yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs-----------------------DVI  602 (974)
T KOG4257|consen  546 YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS-----------------------DVI  602 (974)
T ss_pred             hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc-----------------------ceE
Confidence            222334455789999999988999999999999999999876 99999765432                       122


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ..+..+-+.+.|++|++.+..|+.+||..||.+||.+.++...|.+++.+.+
T Consensus       603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek  654 (974)
T KOG4257|consen  603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEK  654 (974)
T ss_pred             EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhh
Confidence            2344555677888999999999999999999999999999999999998655

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=4.2e-37  Score=286.72  Aligned_cols=234  Identities=18%  Similarity=0.180  Sum_probs=175.3

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||+|+..  ++.||+|++.....   .....+.+|+.+|++++||||+++++++.+.+.+||||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            5899999999999884  78899998754322   234567889999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.......+.++..                 +|++|+|+||+++.+    +.+||+|||+++....    ......
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~----~~~kl~DfG~a~~~~~----~~~~~~  153 (323)
T cd05571          82 LFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD----GHIKITDFGLCKEGIS----DGATMK  153 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC----CCEEEeeCCCCccccc----CCCccc
Confidence            999998766555444332                 234667999999876    5699999999875311    112234


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .. ....+.          .. 
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----------~~-~~~~~~----------~~-  210 (323)
T cd05571         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----------EK-LFELIL----------ME-  210 (323)
T ss_pred             ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----------HH-HHHHHH----------cC-
Confidence            56799999999999988999999999999999999999999963211           00 001110          00 


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                       ...++..+++++.+|+.+||+.||++||     ++.++++   +-+....+|...
T Consensus       211 -~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~---h~~f~~~~~~~~  262 (323)
T cd05571         211 -EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME---HRFFASINWQDV  262 (323)
T ss_pred             -CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc---CCCcCCCCHHHH
Confidence             1123445678899999999999999999     6777753   333344444443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.2e-37  Score=259.32  Aligned_cols=223  Identities=16%  Similarity=0.187  Sum_probs=178.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .++.||+|-||.||.|+.+  +--||+|+.....-   ....++.+|++|-..|+||||+++|++|.+....||++||.+
T Consensus        26 igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~  105 (281)
T KOG0580|consen   26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAP  105 (281)
T ss_pred             ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecC
Confidence            4688999999999999997  45677777543321   246789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC--CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPR--NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~--~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|+|...|...+  .+.+....                 .+++||+|+|+|++..+    .+||+|||.+..-      .
T Consensus       106 ~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~----~lkiAdfGwsV~~------p  175 (281)
T KOG0580|consen  106 RGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG----ELKIADFGWSVHA------P  175 (281)
T ss_pred             CchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC----CeeccCCCceeec------C
Confidence            999999999433  33333222                 23457789999998874    4999999998652      2


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .....+.|||..|.+||+..+..++..+|+|++|+++||++.|.+||+....            +          +.+.+
T Consensus       176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~------------~----------etYkr  233 (281)
T KOG0580|consen  176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH------------S----------ETYKR  233 (281)
T ss_pred             CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh------------H----------HHHHH
Confidence            4566789999999999999999999999999999999999999999974321            1          11222


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..-+  -.+|..++..+.|+|.+|+.++|.+|....|+++
T Consensus       234 I~k~~--~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  234 IRKVD--LKFPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHcc--ccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            22222  2346778899999999999999999999888865

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=4e-36  Score=281.08  Aligned_cols=239  Identities=17%  Similarity=0.230  Sum_probs=172.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||++++.  +..+|+|....... ...+++.+|+++|++++|||||++++++.+++..++||||+++|
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   88 (331)
T cd06649           9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   88 (331)
T ss_pred             EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCC
Confidence            3567999999999999986  66788887654322 23567999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++......+...+.                  .+|++|+|+||+++.+    +.+||+|||++..+..      ..
T Consensus        89 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~------~~  158 (331)
T cd06649          89 SLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR----GEIKLCDFGVSGQLID------SM  158 (331)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCC----CcEEEccCcccccccc------cc
Confidence            999999876554433221                  2345677999999876    5699999999876422      12


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-c-------
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-V-------  306 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------  306 (381)
                      .....|++.|+|||++.+..++.++|||||||++|||++|+.||........        ........... .       
T Consensus       159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  230 (331)
T cd06649         159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKEL--------EAIFGRPVVDGEEGEPHSIS  230 (331)
T ss_pred             cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHhcccccccccCCccccC
Confidence            2345799999999999988899999999999999999999999963221100        00000000000 0       


Q ss_pred             --------------------c---chhhhhcccccCC-CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 --------------------G---GVRKWVDRRLKDS-YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 --------------------~---~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                          .   .+...+.....+. ....+++++.+||.+||+.||++|||+.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~  300 (331)
T cd06649         231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN  300 (331)
T ss_pred             cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                0   0000000000111 11235678999999999999999999999975

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1e-36  Score=289.37  Aligned_cols=235  Identities=21%  Similarity=0.301  Sum_probs=172.5

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|++.       +..||+|+....... ..+.+.+|+++++.+ +|+|||+++++|...+..++||
T Consensus        42 ~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~  121 (374)
T cd05106          42 FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVIT  121 (374)
T ss_pred             ehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeH
Confidence            3577999999999999852       246888887543322 356788999999999 8999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCC---------------------------------------------------------------
Q 016850          167 EHVSGANLADCLRNPRN---------------------------------------------------------------  183 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~---------------------------------------------------------------  183 (381)
                      |||++|+|.+++.....                                                               
T Consensus       122 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (374)
T cd05106         122 EYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEE  201 (374)
T ss_pred             hhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchh
Confidence            99999999999864210                                                               


Q ss_pred             -------CCccc-------hH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccC
Q 016850          184 -------PSFTV-------LS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIE  239 (381)
Q Consensus       184 -------~~~~~-------~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~  239 (381)
                             .....       +.          .+|++|+|+||+++++    ..+||+|||+++.....  ..........
T Consensus       202 ~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~----~~~kL~DfGla~~~~~~--~~~~~~~~~~  275 (374)
T cd05106         202 DTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG----RVAKICDFGLARDIMND--SNYVVKGNAR  275 (374)
T ss_pred             ccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC----CeEEEeeceeeeeccCC--cceeeccCCC
Confidence                   11111       11          1344677999999876    56999999999764321  1111122334


Q ss_pred             CCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc
Q 016850          240 GTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK  318 (381)
Q Consensus       240 gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (381)
                      +++.|+|||++.+..++.++|||||||++|||++ |+.||......           ..           +.........
T Consensus       276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-----------~~-----------~~~~~~~~~~  333 (374)
T cd05106         276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-----------SK-----------FYKMVKRGYQ  333 (374)
T ss_pred             CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-----------HH-----------HHHHHHcccC
Confidence            5678999999988899999999999999999997 99999643211           00           0111111112


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          319 DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ...+...++++.+++.+||+.||++||++.+|++.|++++
T Consensus       334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            2223334678999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.4e-36  Score=288.58  Aligned_cols=233  Identities=22%  Similarity=0.296  Sum_probs=170.5

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|++.       +..||+|+.+.... ...+.+.+|+.+|..+ +|||||+++++|.+.+..++|||
T Consensus        40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E  119 (375)
T cd05104          40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE  119 (375)
T ss_pred             hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence            578999999999999742       45788888654332 2456788999999999 89999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC----------------------------------------------------------------
Q 016850          168 HVSGANLADCLRNPRN----------------------------------------------------------------  183 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~----------------------------------------------------------------  183 (381)
                      ||++|+|.+++.....                                                                
T Consensus       120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (375)
T cd05104         120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV  199 (375)
T ss_pred             hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence            9999999999965321                                                                


Q ss_pred             -----------CCcc-------chH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          184 -----------PSFT-------VLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       184 -----------~~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                                 ....       ++.          .+|++|+|.|||++++    ..+||+|||+++......  .....
T Consensus       200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~----~~~kl~DfG~a~~~~~~~--~~~~~  273 (375)
T cd05104         200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG----RITKICDFGLARDIRNDS--NYVVK  273 (375)
T ss_pred             HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC----CcEEEecCccceeccCcc--ccccc
Confidence                       0111       111          1234677899998875    569999999998653211  11112


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||++.+..++.++|||||||++|||++ |..||......           ......           +.
T Consensus       274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-----------~~~~~~-----------~~  331 (375)
T cd05104         274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-----------SKFYKM-----------IK  331 (375)
T ss_pred             CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-----------HHHHHH-----------HH
Confidence            22345678999999998899999999999999999998 88888532211           011111           11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      .......+...+.++.+|+.+||+.||++||++.+|++.|++.
T Consensus       332 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         332 EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            1111122233456899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-37  Score=271.54  Aligned_cols=245  Identities=16%  Similarity=0.187  Sum_probs=175.4

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEeccccccc--HHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD--LEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~  171 (381)
                      .+|++|+||.||+|+++  +.-||+|+++......  .-.-.|||.+|.+++|||||.+-++...  -+.+|||||||+ 
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-  160 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-  160 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-
Confidence            57999999999999996  6788888876655431  2346789999999999999999998773  456999999996 


Q ss_pred             CCHHHHhcCCC-CCCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNPR-NPSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~~-~~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      .||..+|.... .+...+                 ..++|+|||++|+|+.+.    +.+||+|||+|+.++.    ...
T Consensus       161 hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~----G~lKiaDFGLAR~ygs----p~k  232 (419)
T KOG0663|consen  161 HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK----GILKIADFGLAREYGS----PLK  232 (419)
T ss_pred             hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC----CcEEecccchhhhhcC----Ccc
Confidence            79999998765 222111                 123456888999999988    5599999999998754    334


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ..+..+-|.+|+|||++.+. .|+.+.|+||+|||+.||+++++.|+...+-... .....++....+.++.+...+..+
T Consensus       233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl-~~If~llGtPte~iwpg~~~lp~~  311 (419)
T KOG0663|consen  233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQL-DKIFKLLGTPSEAIWPGYSELPAV  311 (419)
T ss_pred             cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHH-HHHHHHhCCCccccCCCccccchh
Confidence            56677889999999998875 6999999999999999999999999864431100 000111111112222222222111


Q ss_pred             --------hcccccCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 --------VDRRLKDSYPVE-VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 --------~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ....++..++.. .++.-.+|+..+|..||++|.||.|.|+
T Consensus       312 k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  312 KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence                    111122223322 4578899999999999999999999864

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-37  Score=291.08  Aligned_cols=241  Identities=19%  Similarity=0.265  Sum_probs=187.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+|+++..+  +..+|||..+...   ..+.+..+.|..|+... +||.++.++..|...+++|+||||+
T Consensus       372 ~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~  451 (694)
T KOG0694|consen  372 LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYV  451 (694)
T ss_pred             EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEec
Confidence            3577899999999999986  6789999876543   33678888999998887 5999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      .||++..+.+. +.+.+..+.                 ++.+|||-.|||||.+    +++||+|||+++..    ....
T Consensus       452 ~Ggdm~~~~~~-~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~e----Gh~kiADFGlcKe~----m~~g  522 (694)
T KOG0694|consen  452 AGGDLMHHIHT-DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTE----GHVKIADFGLCKEG----MGQG  522 (694)
T ss_pred             CCCcEEEEEec-ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEccc----CcEEeccccccccc----CCCC
Confidence            99996555543 333322222                 2335788999999998    67999999999852    2334


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ....++||||.|||||++.+..|+.++|.|||||++|||+.|+.||+..+++        .+.+.              +
T Consensus       523 ~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--------e~Fds--------------I  580 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--------EVFDS--------------I  580 (694)
T ss_pred             CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHH--------------H
Confidence            4677899999999999999999999999999999999999999999854432        11111              1


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHHHHHHHHHHHhhhhhhhcC
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~~~~~~~~~~~~~  369 (381)
                      +.  ....+|..++.+...++.++|.+||++|..+  .+.-+..++-+....+|..+..
T Consensus       581 ~~--d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~  637 (694)
T KOG0694|consen  581 VN--DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLN  637 (694)
T ss_pred             hc--CCCCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhh
Confidence            11  1234677889999999999999999999876  2333345566677778877653

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.5e-36  Score=272.79  Aligned_cols=231  Identities=21%  Similarity=0.278  Sum_probs=172.0

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.     +..|++|..+..... ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus        10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   89 (266)
T cd05064          10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS   89 (266)
T ss_pred             eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC
Confidence            467899999999999863     457888876543322 34578899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... ...+..+..                 +|++|+|.||+++.+    ..+|++|||.+.....   ...
T Consensus        90 ~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~----~~~~l~dfg~~~~~~~---~~~  162 (266)
T cd05064          90 NGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSD----LVCKISGFRRLQEDKS---EAI  162 (266)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCC----CcEEECCCcccccccc---cch
Confidence            999999997643 334333332                 234567999999876    5699999998765311   111


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......++..|+|||.+.+..++.++|||||||++||+++ |+.||......        ....    .          
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~----~----------  220 (266)
T cd05064         163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIK----A----------  220 (266)
T ss_pred             hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHH----H----------
Confidence            11123345678999999998999999999999999999775 99999643210        1111    1          


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                       +........+..++..+.+++.+||+.+|.+||++.+|++.|+++
T Consensus       221 -~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         221 -VEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             -HHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence             111111223445677899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=2e-36  Score=279.71  Aligned_cols=238  Identities=20%  Similarity=0.253  Sum_probs=169.4

Q ss_pred             cccccccCCCceEEEEEEC------------------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEE
Q 016850           96 LAKKFTSSSASASWRGTIR------------------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGAC  156 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~------------------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~  156 (381)
                      ..+.||+|+||.||+|.++                  +..||+|........ ...++.+|+++|.+++|||||++++++
T Consensus         9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~   88 (304)
T cd05096           9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVC   88 (304)
T ss_pred             eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence            3577999999999999863                  235888876543322 356789999999999999999999999


Q ss_pred             EeCCeeeEEEeccCCCCHHHHhcCCCC-------------------CCccch-----------------HHHHHHhhhcc
Q 016850          157 VSGNCGYLVYEHVSGANLADCLRNPRN-------------------PSFTVL-----------------STWLSRMQSSS  200 (381)
Q Consensus       157 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------------~~~~~~-----------------~~~~~~l~~~N  200 (381)
                      .+.+..++||||+++|+|.+++.....                   ..+..+                 ...|++|+|+|
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~N  168 (304)
T cd05096          89 VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRN  168 (304)
T ss_pred             ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhh
Confidence            999999999999999999999865321                   111111                 12344677999


Q ss_pred             eeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh--CCccc
Q 016850          201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS--GEEVL  278 (381)
Q Consensus       201 ill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt--g~~pf  278 (381)
                      ||++++    +.+||+|||+++.+...  ..........++..|+|||++.++.++.++|||||||++|||++  +..||
T Consensus       169 ill~~~----~~~kl~DfG~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~  242 (304)
T cd05096         169 CLVGEN----LTIKIADFGMSRNLYAG--DYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPY  242 (304)
T ss_pred             eEEcCC----ccEEECCCccceecccC--ceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCC
Confidence            999876    56999999999764221  11112233456889999999988889999999999999999987  45566


Q ss_pred             cccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          279 KFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      .....        ..............        ........+..++..+.+|+.+||+.||.+|||+.+|.+.|+
T Consensus       243 ~~~~~--------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         243 GELTD--------EQVIENAGEFFRDQ--------GRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CcCCH--------HHHHHHHHHHhhhc--------cccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            43211        11112111111100        000111123345678999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=8.7e-37  Score=285.25  Aligned_cols=237  Identities=17%  Similarity=0.223  Sum_probs=177.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|++.  ++.||+|++.....   ...+.+.+|+++|++++|||||++++++.+++..|+||||+++
T Consensus        23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  102 (329)
T PTZ00263         23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG  102 (329)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence            567999999999999985  67899998754321   2356788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++......+...+..                 +|++|+|+|||++.+    +.+||+|||+++....       .
T Consensus       103 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~~~~~~~-------~  171 (329)
T PTZ00263        103 GELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNK----GHVKVTDFGFAKKVPD-------R  171 (329)
T ss_pred             ChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCC----CCEEEeeccCceEcCC-------C
Confidence            99999998766555443322                 234677999999876    5699999999986432       1


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........           .
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----------~~~~~~i~-----------~  229 (329)
T PTZ00263        172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----------FRIYEKIL-----------A  229 (329)
T ss_pred             cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----------HHHHHHHh-----------c
Confidence            2245799999999999988899999999999999999999999953211           11111111           1


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHHHHHHHHHHHhhhhhhhc
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~~~~~~~~~~~~  368 (381)
                      .  ...++..++..+.+|+.+||+.||.+||+.  ..+-+.+++-+....+|....
T Consensus       230 ~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~  283 (329)
T PTZ00263        230 G--RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLY  283 (329)
T ss_pred             C--CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHH
Confidence            1  112233456789999999999999999973  123333444455555666543

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=8.9e-37  Score=279.52  Aligned_cols=240  Identities=15%  Similarity=0.165  Sum_probs=176.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|.+.  ++.||+|.......   .....+.+|+.++.+++|+||+++++++.+.+.+++||||+++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05631           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence            467899999999999874  78899998653321   2345678899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+++....  ..+...+..                 +|++|+|+|||++++    ..+||+|||++.....     .
T Consensus        85 g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~----~~~kl~Dfg~~~~~~~-----~  155 (285)
T cd05631          85 GDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDR----GHIRISDLGLAVQIPE-----G  155 (285)
T ss_pred             CcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC----CCEEEeeCCCcEEcCC-----C
Confidence            99998886432  233333222                 234567999999876    5699999999976421     1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......        ..+.....+          
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--------~~~~~~~~~----------  217 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--------KREEVDRRV----------  217 (285)
T ss_pred             CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--------hHHHHHHHh----------
Confidence            12234579999999999998899999999999999999999999997432210        011111100          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhhhhc
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~~~~  368 (381)
                        ......++..+++.+.+|+.+||+.||.+||+     +++++   ++-+.+..+|....
T Consensus       218 --~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~---~h~~~~~~~~~~~~  273 (285)
T cd05631         218 --KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVK---QHPIFKNINFKRLE  273 (285)
T ss_pred             --hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHh---cCHhhcCCCHHHHH
Confidence              00112234456778999999999999999998     55554   45555555665544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-37  Score=280.94  Aligned_cols=224  Identities=17%  Similarity=0.219  Sum_probs=182.4

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ++.||+|.|++|-+|++  .|..||||++....-.  ....+.+|+..|+.++|||||+||++....-.+|||+|+-++|
T Consensus        23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G  102 (864)
T KOG4717|consen   23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG  102 (864)
T ss_pred             hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence            56799999999999988  5999999997543322  4677999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCC-CCCcc-----------------chHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFT-----------------VLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~-----------------~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|++||-.+. ...+.                 ++...|+||||+||++-+.-   +.|||+|||++..+.     ....
T Consensus       103 Dl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl---GlVKLTDFGFSNkf~-----PG~k  174 (864)
T KOG4717|consen  103 DLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL---GLVKLTDFGFSNKFQ-----PGKK  174 (864)
T ss_pred             hHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec---CceEeeeccccccCC-----Ccch
Confidence            9999997653 22222                 23334567889999988743   779999999997653     3345


Q ss_pred             ccccCCCccccchhhhcCCCCC-cchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVT-QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~-~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .++.||.+.|-|||++.+..|+ +++||||||||||-|++|++||+...+.                      +.+..++
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----------------------ETLTmIm  232 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----------------------ETLTMIM  232 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----------------------hhhhhhh
Confidence            6789999999999999999996 7899999999999999999999754331                      2233333


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..  ...|..++.++++||..||..||++|.+.+||..
T Consensus       233 DCK--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  233 DCK--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             ccc--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            332  3458889999999999999999999999988853

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=8.1e-36  Score=268.93  Aligned_cols=231  Identities=18%  Similarity=0.230  Sum_probs=171.9

Q ss_pred             ccccCCCceEEEEEE----CCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTI----RGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~----~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|.+    .+..+++|+.......  ..+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            589999999999976    2578888876543322  3567899999999999999999999875 45678999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++..........+..+                 |.+|+|.||+++++    ..+||+|||+++....... .....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~----~~~kl~Dfg~~~~~~~~~~-~~~~~  155 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ----HYAKISDFGLSKALGADEN-YYKAK  155 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC----CeEEECCCccccccCCCCC-eeeec
Confidence            99999977655544433332                 33566888888876    5699999999986532111 11111


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||.+....++.++|||||||++|||++ |+.||......        ..               ...+.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~---------------~~~i~  212 (257)
T cd05116         156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EV---------------TQMIE  212 (257)
T ss_pred             CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HH---------------HHHHH
Confidence            22345689999999988889999999999999999998 99998632110        11               11112


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      .......+..+++++.++|.+||+.||++||++.+|.+.|+.+|
T Consensus       213 ~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~  256 (257)
T cd05116         213 SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY  256 (257)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence            22222334456788999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=6.4e-36  Score=274.45  Aligned_cols=235  Identities=22%  Similarity=0.291  Sum_probs=174.3

Q ss_pred             ccccccCCCceEEEEEECC-------ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|+...       ..+++|....... ...+++.+|+++++.++||||+++++.+...+..++||||
T Consensus         5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (290)
T cd05045           5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY   84 (290)
T ss_pred             cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence            4678999999999998732       4566666543322 2356789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC------------------------CCccc-----------------hHHHHHHhhhcceeecccC
Q 016850          169 VSGANLADCLRNPRN------------------------PSFTV-----------------LSTWLSRMQSSSIIVSEEN  207 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~------------------------~~~~~-----------------~~~~~~~l~~~Nill~~~~  207 (381)
                      +++|+|.+++.....                        .....                 ...+|++|+|+||+++++ 
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~-  163 (290)
T cd05045          85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG-  163 (290)
T ss_pred             cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC-
Confidence            999999999865321                        11111                 113456788999999887 


Q ss_pred             CCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCc
Q 016850          208 AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGI  286 (381)
Q Consensus       208 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~  286 (381)
                         ..+||+|||+++......  .........++..|+|||.+.+..++.++||||||+++|||++ |..||.....   
T Consensus       164 ---~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---  235 (290)
T cd05045         164 ---RKMKISDFGLSRDVYEED--SYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP---  235 (290)
T ss_pred             ---CcEEeccccccccccCcc--chhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH---
Confidence               569999999997642211  1111223446778999999988889999999999999999998 9999853211   


Q ss_pred             ccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                               ....           ...........+..++..+.+++.+||+.||++||++.++++.|++++.+
T Consensus       236 ---------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         236 ---------ERLF-----------NLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             ---------HHHH-----------HHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence                     0111           11111122223344567899999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=7.9e-36  Score=273.61  Aligned_cols=241  Identities=17%  Similarity=0.238  Sum_probs=177.7

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||++...       +..+++|..........+.+.+|++++++++||||+++++++...+.+++||||
T Consensus         9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   88 (288)
T cd05093           9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY   88 (288)
T ss_pred             eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence            4567899999999999852       244677765544444567799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC-------------CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccc
Q 016850          169 VSGANLADCLRNPR-------------NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-------------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                      +++|+|.+++....             ..++..+..                 +|++|+|+||+++++    ..+||+||
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~----~~~kl~df  164 (288)
T cd05093          89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN----LLVKIGDF  164 (288)
T ss_pred             CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC----CcEEeccC
Confidence            99999999997543             123322222                 234567999999876    56999999


Q ss_pred             ccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHH
Q 016850          219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       219 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      |+++.....  ..........+++.|+|||++.+..++.++|||||||++|+|++ |..||......        .... 
T Consensus       165 g~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--------~~~~-  233 (288)
T cd05093         165 GMSRDVYST--DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--------EVIE-  233 (288)
T ss_pred             CccccccCC--ceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHH-
Confidence            999764321  11111223446789999999998889999999999999999998 89998532210        0111 


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhh
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~  365 (381)
                        ....            ......+..++..+.+|+.+||+.||.+||++.++++.|+++......|.
T Consensus       234 --~i~~------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~~~  287 (288)
T cd05093         234 --CITQ------------GRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVYL  287 (288)
T ss_pred             --HHHc------------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhccccc
Confidence              1110            00111122345679999999999999999999999999999987665553

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-38  Score=264.25  Aligned_cols=230  Identities=18%  Similarity=0.227  Sum_probs=173.5

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      +.||+|.|+.|+++.+.  |+.+++|.+..+.  ..+.+++.+|+.|.+.|+|||||+|.+.+......|||+|+|+||+
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~d   96 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE   96 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchH
Confidence            56999999999999885  8888888765433  2367899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCC-------ccchHHHHHHhhhcceeecccCCCc---------cceEEcccccccccccCCCCccccccc
Q 016850          174 LADCLRNPRNPS-------FTVLSTWLSRMQSSSIIVSEENAGS---------LCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       174 L~~~l~~~~~~~-------~~~~~~~~~~l~~~Nill~~~~~~~---------~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      |..-|..+.-..       .+|++..+.+.|..||++++.++.|         --+||+|||+|..++     .......
T Consensus        97 l~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-----~g~~~~G  171 (355)
T KOG0033|consen   97 LFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-----DGEAWHG  171 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-----Ccccccc
Confidence            987665432111       2344444444444444444433322         348999999998764     2334567


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      .+|||+|||||++....|+..+|||+.|||||-|+.|.+||.....+           +...++..+.         -..
T Consensus       172 ~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-----------rlye~I~~g~---------yd~  231 (355)
T KOG0033|consen  172 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----------RLYEQIKAGA---------YDY  231 (355)
T ss_pred             ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-----------HHHHHHhccc---------cCC
Confidence            88999999999999999999999999999999999999999753221           1111112111         112


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+.+++..++|+.+||..||++|.|+.|+|+
T Consensus       232 ~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  232 PSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            33345678899999999999999999999999874

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-36  Score=280.30  Aligned_cols=230  Identities=21%  Similarity=0.259  Sum_probs=186.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||.|.||.||+++.+  |+.+|+|.+......   +.+.+.+|+++|++|. |||||.++++|++...+++|||+|.
T Consensus        40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~  119 (382)
T KOG0032|consen   40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE  119 (382)
T ss_pred             hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC
Confidence            467999999999999985  788999987665543   4578999999999998 9999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ||.|.+.|... ...+..+                 ...|+||||+|+|+......+..+|++|||++.....     ..
T Consensus       120 GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~-----~~  193 (382)
T KOG0032|consen  120 GGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP-----GE  193 (382)
T ss_pred             CchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-----Cc
Confidence            99999999876 2332222                 2234577899999988765557899999999987532     34


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++....|+..+||||+||++|.|++|.+||........           ......+         
T Consensus       194 ~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-----------~~~i~~~---------  253 (382)
T KOG0032|consen  194 RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-----------FLAILRG---------  253 (382)
T ss_pred             eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-----------HHHHHcC---------
Confidence            56788999999999999989999999999999999999999999975433211           0111111         


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..+.....+.++..++++|..||..||.+|+++.++|+
T Consensus       254 ~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  254 DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            112344456678999999999999999999999999988

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=3.1e-36  Score=272.58  Aligned_cols=231  Identities=21%  Similarity=0.306  Sum_probs=174.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|.+.  ++.|++|.... .....+.+.+|++++++++||||+++++++..++.+++||||+++|+|
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (263)
T cd05052          11 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL   89 (263)
T ss_pred             eeecCCcccceEEEEEEecCCceEEEEEecC-CchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcH
Confidence            467999999999999985  67888887643 333467789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++....  ..+...+..                 .|++|+|+||+++++    ..+||+|||++.....   ......
T Consensus        90 ~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~----~~~kl~df~~~~~~~~---~~~~~~  162 (263)
T cd05052          90 LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN----HLVKVADFGLSRLMTG---DTYTAH  162 (263)
T ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC----CcEEeCCCcccccccc---ceeecc
Confidence            99997543  233222222                 223566999999876    5599999999976432   111111


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||.+.+..++.++|||||||++|||++ |..||.....           .+ ....           +.
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----------~~-~~~~-----------~~  219 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------SQ-VYEL-----------LE  219 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----------HH-HHHH-----------HH
Confidence            22334678999999988899999999999999999998 9999863211           01 1111           11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      .......+..++..+.+++.+||+.||++||++.++++.|+.++
T Consensus       220 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  263 (263)
T cd05052         220 KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF  263 (263)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence            11222334456678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.9e-36  Score=293.36  Aligned_cols=228  Identities=19%  Similarity=0.239  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC---CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR---GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|...   +..|++|+...........+.+|+.+|+.++|||||++++++...+.+||||||+++|
T Consensus        71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg  150 (478)
T PTZ00267         71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGG  150 (478)
T ss_pred             EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCC
Confidence            3567899999999999874   4567777654444444567888999999999999999999999999999999999999


Q ss_pred             CHHHHhcCC----CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRNP----RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~~----~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.++|...    .......+..                 +|+||||+|||++..    +.+||+|||+++.+...  ..
T Consensus       151 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~----~~~kL~DFgla~~~~~~--~~  224 (478)
T PTZ00267        151 DLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPT----GIIKLGDFGFSKQYSDS--VS  224 (478)
T ss_pred             CHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCC----CcEEEEeCcCceecCCc--cc
Confidence            999988642    2233222221                 234677999999876    56999999999875321  11


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+.......+       
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----------~~~~~~~~~~-------  286 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----------REIMQQVLYG-------  286 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhC-------
Confidence            1223456799999999999988999999999999999999999999953211           1111111111       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          . ....+..++..+.+||.+||+.||++||++.+++.
T Consensus       287 ----~-~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        287 ----K-YDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             ----C-CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence                1 11223346678999999999999999999999864

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=4.1e-36  Score=280.02  Aligned_cols=222  Identities=16%  Similarity=0.148  Sum_probs=169.5

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||++...  ++.||+|+......   .....+.+|+++++.++||||+++++++...+.+||||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence            5899999999999874  78899998754322   234567789999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |..++.......+..+..+                 |++|+|+|||++.+    +.+||+|||+++....    ......
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~~~~~~~----~~~~~~  153 (323)
T cd05595          82 LFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCKEGIS----DGATMK  153 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC----CCEEecccHHhccccC----CCCccc
Confidence            9999987665554443322                 34567999999876    5699999999875311    112233


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........           .. 
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----------~~~~~~~~-----------~~-  210 (323)
T cd05595         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----------ERLFELIL-----------ME-  210 (323)
T ss_pred             cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----------HHHHHHHh-----------cC-
Confidence            46799999999999988999999999999999999999999963211           00001111           00 


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~  352 (381)
                       ...++..+++.+.+|+.+||+.||++||     ++.++++
T Consensus       211 -~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         211 -EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             -CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence             1123345677899999999999999998     6776654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=3.5e-36  Score=281.01  Aligned_cols=222  Identities=18%  Similarity=0.159  Sum_probs=170.4

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||++...  ++.||+|+.....   ......+.+|+.+|+.++||||+++++++.+.+.+|+||||+++|+
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            5899999999999885  7889999875432   2235678889999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.......+.++..+                 |++|+|+|||++.+    +.+||+|||+++....    ......
T Consensus        82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~----~~~kL~DfG~~~~~~~----~~~~~~  153 (328)
T cd05593          82 LFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD----GHIKITDFGLCKEGIT----DAATMK  153 (328)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC----CcEEEecCcCCccCCC----cccccc
Confidence            9999987665554443322                 34677999999876    5699999999875321    112234


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .... ..+.          .  
T Consensus       154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----------~~~~-~~~~----------~--  209 (328)
T cd05593         154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----------EKLF-ELIL----------M--  209 (328)
T ss_pred             cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----------HHHH-HHhc----------c--
Confidence            56799999999999988999999999999999999999999963211           0000 0110          0  


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~  352 (381)
                      ....++..+++++.+|+.+||+.||++||     ++.++++
T Consensus       210 ~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         210 EDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             CCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            01123445677899999999999999997     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=6.8e-36  Score=285.26  Aligned_cols=234  Identities=18%  Similarity=0.279  Sum_probs=172.7

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|++.       +..||+|++...... ..+.+.+|+++|+++. |||||++++++.+.+..|||||
T Consensus        42 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E  121 (400)
T cd05105          42 GRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITE  121 (400)
T ss_pred             hheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEE
Confidence            567999999999999863       236899987543332 3567999999999995 9999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC----------------------------------------------------------------
Q 016850          168 HVSGANLADCLRNPRN----------------------------------------------------------------  183 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~----------------------------------------------------------------  183 (381)
                      ||++|+|.++|.....                                                                
T Consensus       122 y~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (400)
T cd05105         122 YCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYS  201 (400)
T ss_pred             ecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhh
Confidence            9999999999865320                                                                


Q ss_pred             --------------------------------CCcc-------chHH----------HHHHhhhcceeecccCCCccceE
Q 016850          184 --------------------------------PSFT-------VLST----------WLSRMQSSSIIVSEENAGSLCAK  214 (381)
Q Consensus       184 --------------------------------~~~~-------~~~~----------~~~~l~~~Nill~~~~~~~~~~k  214 (381)
                                                      ....       ++..          +|++|+|+||+++++    ..+|
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~----~~~k  277 (400)
T cd05105         202 DIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG----KIVK  277 (400)
T ss_pred             hcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC----CEEE
Confidence                                            0001       1111          123566888888876    5699


Q ss_pred             EcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchh
Q 016850          215 ICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVS  293 (381)
Q Consensus       215 l~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~  293 (381)
                      |+|||+++.+...  ..........+++.|+|||++.+..++.++|||||||++|||++ |..||......         
T Consensus       278 L~DfGla~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~---------  346 (400)
T cd05105         278 ICDFGLARDIMHD--SNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD---------  346 (400)
T ss_pred             EEeCCcceecccc--ccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh---------
Confidence            9999999865321  11112233457789999999988889999999999999999997 88998642110         


Q ss_pred             HHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          294 VVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                        ......           +........+..++..+.+++.+||+.||++||++.+|.++|++++
T Consensus       347 --~~~~~~-----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         347 --STFYNK-----------IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             --HHHHHH-----------HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence              000111           1111122233456778999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-36  Score=276.46  Aligned_cols=235  Identities=19%  Similarity=0.198  Sum_probs=178.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|...  ++.||+|+......   ...+.+.+|+++|++++||||+++++++.+.+.+++||||+++
T Consensus         6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   85 (291)
T cd05612           6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG   85 (291)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence            567999999999999986  78899998754322   2346688999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++...+......+..+                 |++|+|+|||++++    +.+||+|||+++....       .
T Consensus        86 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~----~~~kl~Dfg~~~~~~~-------~  154 (291)
T cd05612          86 GELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKE----GHIKLTDFGFAKKLRD-------R  154 (291)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC----CCEEEEecCcchhccC-------C
Confidence            999999987665554433322                 33567999999876    5699999999976422       1


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .........           
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----------~~~~~~i~~-----------  212 (291)
T cd05612         155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----------FGIYEKILA-----------  212 (291)
T ss_pred             cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHh-----------
Confidence            2245799999999999988899999999999999999999999963211           111111111           


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhhhhcC
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                      .  ...++...++.+.+|+.+||+.||.+||+     +.+++   ++-+....+|.....
T Consensus       213 ~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l---~h~~~~~~~~~~~~~  267 (291)
T cd05612         213 G--KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVK---NHRWFKSVDWDDVPQ  267 (291)
T ss_pred             C--CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHh---cCccccCCCHHHHhc
Confidence            0  11234445678999999999999999995     66664   444455556665443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3e-36  Score=294.09  Aligned_cols=234  Identities=13%  Similarity=0.158  Sum_probs=182.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEE-EEEe------CCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLG-ACVS------GNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~-~~~~------~~~~~lv~  166 (381)
                      .+.|-+|||+.||+|+..  +..+|+|++...+....+.+.+||++|++|+ |+|||.+++ ....      .-+++|+|
T Consensus        42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm  121 (738)
T KOG1989|consen   42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM  121 (738)
T ss_pred             EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence            567899999999999985  3899999998887778899999999999996 999999999 3321      23578999


Q ss_pred             eccCCCCHHHHhcCC--CCCCccchH-------------------HHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          167 EHVSGANLADCLRNP--RNPSFTVLS-------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       167 e~~~~gsL~~~l~~~--~~~~~~~~~-------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      |||+||.|-|++..+  ..+.+.+++                   .+|+|||-+||||.++    +..||||||.|.-.-
T Consensus       122 EyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~----g~~KLCDFGSatt~~  197 (738)
T KOG1989|consen  122 EYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSAD----GNYKLCDFGSATTKI  197 (738)
T ss_pred             hhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCC----CCEEeCccccccccc
Confidence            999999999999853  234444443                   4567899999999998    569999999986432


Q ss_pred             cCCCCccc-----cccccCCCccccchhhh---cCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          226 EVSGNESG-----KVNKIEGTRGYMAPEFQ---ASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       226 ~~~~~~~~-----~~~~~~gt~~y~aPE~~---~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      ........     ..-...-|+.|+|||++   .+..++.|+|||+|||+||-|+....||+...               
T Consensus       198 ~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg---------------  262 (738)
T KOG1989|consen  198 LSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG---------------  262 (738)
T ss_pred             CCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------------
Confidence            21111110     11234479999999976   46678999999999999999999999997432               


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                                 -..++...+.-+..+.++..+.+||..||+.||.+||++-+|+..+-++...
T Consensus       263 -----------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  263 -----------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             -----------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence                       2223334444333457899999999999999999999999999999888554

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.8e-36  Score=286.91  Aligned_cols=235  Identities=22%  Similarity=0.324  Sum_probs=174.7

Q ss_pred             cccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|++.+       ..||+|++...... ..+.+.+|+++|.++. |||||++++++...+..++||
T Consensus        41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~  120 (401)
T cd05107          41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIIT  120 (401)
T ss_pred             hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEE
Confidence            35789999999999999743       57999987654332 3457889999999997 999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCC--------------------------------------------------------------
Q 016850          167 EHVSGANLADCLRNPRNP--------------------------------------------------------------  184 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~--------------------------------------------------------------  184 (381)
                      |||++|+|.++|+..+..                                                              
T Consensus       121 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (401)
T cd05107         121 EYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVK  200 (401)
T ss_pred             eccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhh
Confidence            999999999999753210                                                              


Q ss_pred             ------------------------------------Ccc-------chH----------HHHHHhhhcceeecccCCCcc
Q 016850          185 ------------------------------------SFT-------VLS----------TWLSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       185 ------------------------------------~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~  211 (381)
                                                          .+.       ++.          ..|++|+|+|||+++.    .
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~----~  276 (401)
T cd05107         201 YADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEG----K  276 (401)
T ss_pred             hhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCC----C
Confidence                                                000       111          1244677999999876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++.+....  .........+++.|+|||.+.+..++.++|||||||++|||++ |..||.....       
T Consensus       277 ~~kL~DfGla~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~-------  347 (401)
T cd05107         277 LVKICDFGLARDIMRDS--NYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM-------  347 (401)
T ss_pred             EEEEEecCcceeccccc--ccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-------
Confidence            69999999997642211  1111223457889999999988889999999999999999998 8888853211       


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                          .+.....+           ........+..++.++.+|+.+||..+|.+||++.+|++.|+.++
T Consensus       348 ----~~~~~~~~-----------~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         348 ----NEQFYNAI-----------KRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             ----hHHHHHHH-----------HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                11111111           111122234445678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=8.8e-36  Score=268.47  Aligned_cols=227  Identities=20%  Similarity=0.287  Sum_probs=168.5

Q ss_pred             ccccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||++.+.+ ..+++|... ......+++.+|+++|++++||||+++++++.+.+..++||||+++|+|.
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~   87 (256)
T cd05114           9 MKELGSGQFGVVHLGKWRAQIKVAIKAIN-EGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL   87 (256)
T ss_pred             eeEecCCcCceEEEEEeccCceEEEEecc-cCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence            5679999999999999864 577777654 33334678999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ......+..                 .|++|+|.||+++++    ..+||+|||+++....   ........
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~----~~~kl~d~g~~~~~~~---~~~~~~~~  160 (256)
T cd05114          88 NYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSST----GVVKVSDFGMTRYVLD---DEYTSSSG  160 (256)
T ss_pred             HHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCC----CeEEECCCCCccccCC---CceeccCC
Confidence            9997543 233332222                 234567999999876    5699999999876421   11111123


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||++.+..++.++||||||+++|||++ |+.||.....        ......   ...            .
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--------~~~~~~---i~~------------~  217 (256)
T cd05114         161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--------YEVVEM---ISR------------G  217 (256)
T ss_pred             CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHH---HHC------------C
Confidence            345678999999988889999999999999999999 8999853211        011111   110            0


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      .....+...+..+.+++.+||+.||++||++.++++.|
T Consensus       218 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         218 FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            01111223456789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-36  Score=287.10  Aligned_cols=228  Identities=19%  Similarity=0.247  Sum_probs=180.3

Q ss_pred             ccccccCCCceEEEEEEC---C--ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR---G--KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~--~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.|++|.|+   |  -.||||.++..... ...+|.+|+.+|.+|+|+|+|+|||+..+ ..+.+|||+++
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap  193 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP  193 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence            367999999999999995   3  35778876554433 67899999999999999999999999888 67889999999


Q ss_pred             CCCHHHHhcCCCC--CCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPRN--PSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~~--~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      .|+|.+.|++...  +....                 ...+|+||...|+||-.-    -.||||||||.+.++.....+
T Consensus       194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasp----rtVKI~DFGLmRaLg~ned~Y  269 (1039)
T KOG0199|consen  194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASP----RTVKICDFGLMRALGENEDMY  269 (1039)
T ss_pred             cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheeccc----ceeeeecccceeccCCCCcce
Confidence            9999999988322  11111                 123567888999999886    459999999999886533222


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       .......-...|+|||.+....++.++|||+|||++|||++ |+.||.....                       ..+.
T Consensus       270 -vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----------------------~qIL  325 (1039)
T KOG0199|consen  270 -VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----------------------IQIL  325 (1039)
T ss_pred             -EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----------------------HHHH
Confidence             33445556789999999999999999999999999999999 7888864332                       1123


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      +.++...+...|..|++++.+++.+||..+|++||++..|.+.
T Consensus       326 ~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  326 KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            3344444555677899999999999999999999999999743

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=6.6e-36  Score=269.98  Aligned_cols=230  Identities=19%  Similarity=0.316  Sum_probs=172.0

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .++||+|+||.||+|... ++.|++|..... ....+.+.+|+.++++++|+||+++++++.+.+..++||||+++|+|.
T Consensus        11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (261)
T cd05072          11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLL   89 (261)
T ss_pred             eeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHH
Confidence            577999999999999986 567888775432 234678999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  ......+..                 .|++|+|.||++++.    +.+||+|||++......   ......
T Consensus        90 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~----~~~~l~dfg~~~~~~~~---~~~~~~  162 (261)
T cd05072          90 DFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSES----LMCKIADFGLARVIEDN---EYTARE  162 (261)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCC----CcEEECCCccceecCCC---ceeccC
Confidence            9997532  223222221                 234567999999886    56999999999875321   111122


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||++.+..++.++|||||||++|+|++ |+.||......        .....    +           ..
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~----~-----------~~  219 (261)
T cd05072         163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--------DVMSA----L-----------QR  219 (261)
T ss_pred             CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--------HHHHH----H-----------Hc
Confidence            3446778999999988889999999999999999998 99998632110        11111    1           00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      .........++.++.+++.+||..||++||+++++++.|+++
T Consensus       220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         220 GYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            111112223567899999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.8e-36  Score=279.75  Aligned_cols=230  Identities=15%  Similarity=0.175  Sum_probs=173.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+......   .....+.+|++++..++||||+++++++.+.+..||||||++
T Consensus         5 ~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   84 (333)
T cd05600           5 ILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVP   84 (333)
T ss_pred             EEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCC
Confidence            3577999999999999985  68899998754322   234668899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.........++..                 +|++|+|+|||++.+    +.+||+|||++.....       
T Consensus        85 g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~kL~Dfg~a~~~~~-------  153 (333)
T cd05600          85 GGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDAS----GHIKLTDFGLSKGIVT-------  153 (333)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC----CCEEEEeCcCCccccc-------
Confidence            999999998766555443332                 234677999999876    5699999999976422       


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......        .........        ...+
T Consensus       154 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~--------~~~~  217 (333)
T cd05600         154 YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--------ETWENLKYW--------KETL  217 (333)
T ss_pred             ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--------HHHHHHHhc--------cccc
Confidence            234567999999999999889999999999999999999999999642210        011110000        0000


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...........+++++.+|+.+||..+|.+||++.++++
T Consensus       218 ~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~  256 (333)
T cd05600         218 QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN  256 (333)
T ss_pred             cCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence            000000001245778999999999999999999998865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.1e-35  Score=272.48  Aligned_cols=248  Identities=15%  Similarity=0.106  Sum_probs=170.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|+++  ++.||+|+......  ...+.+.+|++++++++||||+++++++.+++.+++||||+++
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (287)
T cd07848           5 VLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEK   84 (287)
T ss_pred             EEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCC
Confidence            3567899999999999995  67889988754332  2356788999999999999999999999999999999999988


Q ss_pred             CCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +.|..+...........+..                 +|++|+|+||+++.+    ..+||+|||++..+..   .....
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~---~~~~~  157 (287)
T cd07848          85 NMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN----DVLKLCDFGFARNLSE---GSNAN  157 (287)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC----CcEEEeeccCcccccc---ccccc
Confidence            77765554433444333322                 234567999999876    5699999999987532   11122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhH----HHHHHHHHcCCccchh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSV----VDKASEAVAGGVGGVR  310 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  310 (381)
                      .....|++.|+|||++.+..++.++|||||||++|||++|++||.......... .....    .......... .....
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~  235 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLF-TIQKVLGPLPAEQMKLFYS-NPRFH  235 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhhCCCCHHHHHhhhc-cchhc
Confidence            234578999999999988889999999999999999999999997432210000 00000    0000000000 00000


Q ss_pred             hhhcccc------cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRL------KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..      .......++..+.+|+.+||+.||++|||++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000000      00111235678999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.2e-35  Score=275.12  Aligned_cols=175  Identities=19%  Similarity=0.281  Sum_probs=141.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||++.+.  +..+++|....... ...+.+.+|+++|++++|||||+++++|.+++.+++||||+++|
T Consensus         9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   88 (333)
T cd06650           9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   88 (333)
T ss_pred             eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCC
Confidence            4577999999999999986  66777776654322 23567899999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++..........+.                  ..|++|+|+|||++++    +.+||+|||++..+..      ..
T Consensus        89 ~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~----~~~kL~Dfg~~~~~~~------~~  158 (333)
T cd06650          89 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR----GEIKLCDFGVSGQLID------SM  158 (333)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCC----CCEEEeeCCcchhhhh------hc
Confidence            999999876544433221                  1234567888888876    5599999999876422      12


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKF  280 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~  280 (381)
                      .....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            2345789999999999988899999999999999999999999964

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=8.1e-36  Score=269.33  Aligned_cols=229  Identities=22%  Similarity=0.383  Sum_probs=175.6

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||.|+||.||+|... ++.+++|............+.+|+.+++.++||||+++++++.+.+..++||||+++|+|.
T Consensus        11 ~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   90 (261)
T cd05148          11 ERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLL   90 (261)
T ss_pred             hhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHH
Confidence            567999999999999986 5778888765554445678999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  .....++..                 .|.+|+|+||+++++    ..+||+|||++......    .....
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~----~~~kl~d~g~~~~~~~~----~~~~~  162 (261)
T cd05148          91 AFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED----LVCKVADFGLARLIKED----VYLSS  162 (261)
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCC----ceEEEccccchhhcCCc----ccccc
Confidence            9998643  233332222                 233567999999887    56999999999765321    11122


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||.+.+..++.++||||||+++|+|++ |+.||.....        ......               +..
T Consensus       163 ~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--------~~~~~~---------------~~~  219 (261)
T cd05148         163 DKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--------HEVYDQ---------------ITA  219 (261)
T ss_pred             CCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHH---------------HHh
Confidence            3456788999999988889999999999999999998 8999863221        011111               111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ......+..+++.+.++|.+||+.||.+|||+.++++.|+.
T Consensus       220 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         220 GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            12222344566789999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.1e-35  Score=269.46  Aligned_cols=230  Identities=18%  Similarity=0.260  Sum_probs=172.0

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|.+.       +..|++|........ ..+.+.+|+++|++++|+||+++++++...+..++||||
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   89 (280)
T cd05049          10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY   89 (280)
T ss_pred             HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence            467999999999999873       357888886554333 457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC--------------CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcc
Q 016850          169 VSGANLADCLRNPRN--------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~--------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      +++|+|.++|.....              ..+..+.                 .+|++|+|.||+++.+    ..+||+|
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~----~~~kl~d  165 (280)
T cd05049          90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD----LVVKIGD  165 (280)
T ss_pred             CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC----CeEEECC
Confidence            999999999976431              1111111                 1234567999999877    5699999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      ||+++.....  ..........+++.|+|||++.+..++.++|||||||++|||++ |..||......        ...+
T Consensus       166 ~g~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--------~~~~  235 (280)
T cd05049         166 FGMSRDVYTT--DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--------EVIE  235 (280)
T ss_pred             cccceecccC--cceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHHH
Confidence            9999754221  11111223446789999999999999999999999999999998 99998532211        1111


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      ..               ........+..++..+.+++.+||+.||++||++.||++.|+
T Consensus       236 ~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         236 CI---------------TQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HH---------------HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            11               111111223345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=3.1e-35  Score=270.10  Aligned_cols=237  Identities=15%  Similarity=0.225  Sum_probs=175.7

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ...||+|+||.||+|...       +..+++|..........+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   89 (291)
T cd05094          10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM   89 (291)
T ss_pred             eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence            467899999999999853       2446777654433334567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCC----------------CCccchHH-----------------HHHHhhhcceeecccCCCccceEEc
Q 016850          170 SGANLADCLRNPRN----------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKIC  216 (381)
Q Consensus       170 ~~gsL~~~l~~~~~----------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~  216 (381)
                      ++++|.+++.....                .++..+..                 +|++|+|.||+++++    ..++|+
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~----~~~~l~  165 (291)
T cd05094          90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN----LLVKIG  165 (291)
T ss_pred             CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC----CcEEEC
Confidence            99999999975421                22222222                 234677999999876    569999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |||++......  ..........++..|+|||++.+..++.++|||||||++|||++ |+.||......        ...
T Consensus       166 dfg~a~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~~~  235 (291)
T cd05094         166 DFGMSRDVYST--DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--------EVI  235 (291)
T ss_pred             CCCcccccCCC--ceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHH
Confidence            99999764321  11112234557889999999998899999999999999999999 99998532110        111


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      +.    +           ........+..++..+.+++.+||+.||.+||++.+|++.|+++.....
T Consensus       236 ~~----~-----------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~  287 (291)
T cd05094         236 EC----I-----------TQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP  287 (291)
T ss_pred             HH----H-----------hCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence            11    1           1111111223456789999999999999999999999999999976543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1e-35  Score=283.55  Aligned_cols=233  Identities=14%  Similarity=0.176  Sum_probs=169.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||+|++.....   ...+.+.+|+++|++++|||||++++++.+.+.+|+|||||+
T Consensus         5 ~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~   84 (381)
T cd05626           5 KIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP   84 (381)
T ss_pred             EEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCC
Confidence            3577999999999999984  67899998754322   235678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC---
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---  230 (381)
                      +|+|.+++......++..+..                 +|+||||+|||++..    +.+||+|||+++.+......   
T Consensus        85 gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~----~~~kL~DFGl~~~~~~~~~~~~~  160 (381)
T cd05626          85 GGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD----GHIKLTDFGLCTGFRWTHNSKYY  160 (381)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC----CCEEEeeCcCCcccccccccccc
Confidence            999999998766555443332                 234677999999876    56999999998643211000   


Q ss_pred             ----------------------------------------ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHH
Q 016850          231 ----------------------------------------ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE  270 (381)
Q Consensus       231 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~e  270 (381)
                                                              ........+||+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e  240 (381)
T cd05626         161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE  240 (381)
T ss_pred             cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence                                                    0001124579999999999998889999999999999999


Q ss_pred             HHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHH--hhccCCCCCCChH
Q 016850          271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQ--CVDEDPGKRPDMR  348 (381)
Q Consensus       271 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~  348 (381)
                      |++|+.||......           .........         ...........+++++.+|+.+  |+..+|..||++.
T Consensus       241 lltG~~Pf~~~~~~-----------~~~~~i~~~---------~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~  300 (381)
T cd05626         241 MLVGQPPFLAPTPT-----------ETQLKVINW---------ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD  300 (381)
T ss_pred             HHhCCCCCcCCCHH-----------HHHHHHHcc---------ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence            99999999642210           000001000         0011111122356789999988  4455666799999


Q ss_pred             HHHH
Q 016850          349 QVTG  352 (381)
Q Consensus       349 evl~  352 (381)
                      ++++
T Consensus       301 ~~l~  304 (381)
T cd05626         301 DIKA  304 (381)
T ss_pred             HHhc
Confidence            9965

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-36  Score=282.30  Aligned_cols=221  Identities=18%  Similarity=0.252  Sum_probs=173.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ...||.|+||.||-|++.  ...||||+.......   ...++.+||..|++|+|||+|.+-|+|..+...||||||| -
T Consensus        31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-l  109 (948)
T KOG0577|consen   31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-L  109 (948)
T ss_pred             HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-h
Confidence            367999999999999984  677888887655443   4578899999999999999999999999999999999999 6


Q ss_pred             CCHHHHhcCCCCC-C-----------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNPRNP-S-----------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~~~~-~-----------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+-.|+|.-++.. .                 .+....+|+|||..||||.+.    +.|||+|||.|...        .
T Consensus       110 GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~----g~VKLaDFGSAsi~--------~  177 (948)
T KOG0577|consen  110 GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP----GLVKLADFGSASIM--------A  177 (948)
T ss_pred             ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC----Ceeeeccccchhhc--------C
Confidence            8888887644321 1                 222345678899999999998    66999999988653        3


Q ss_pred             cccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          234 KVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ..+.++|||.|||||++.   .+.|+-++|||||||++.||..+++|+-....           ...           +.
T Consensus       178 PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-----------MSA-----------LY  235 (948)
T KOG0577|consen  178 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSA-----------LY  235 (948)
T ss_pred             chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-----------HHH-----------HH
Confidence            467799999999999875   57899999999999999999999999742211           111           11


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+....-+.....+++..+..|+..||++-|.+|||.++++.
T Consensus       236 HIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  236 HIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            111111122224578999999999999999999999999864

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1e-35  Score=276.89  Aligned_cols=237  Identities=16%  Similarity=0.228  Sum_probs=174.8

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|.+.  ++.||+|+.....   ....+.+.+|+.++..+ +||||+++++++.+.+.+|+||||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            5899999999999985  6789999875432   22456677899988877 7999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++..........+..+                 |++|+|+|||++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~----~~~kL~DfG~~~~~~~----~~~~~  153 (320)
T cd05590          82 DLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE----GHCKLADFGMCKEGIF----NGKTT  153 (320)
T ss_pred             hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC----CcEEEeeCCCCeecCc----CCCcc
Confidence            99999987665554433322                 34567999999877    5699999999875321    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........ .          .
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----------~~~~~~i~-~----------~  211 (320)
T cd05590         154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----------DDLFEAIL-N----------D  211 (320)
T ss_pred             cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----------HHHHHHHh-c----------C
Confidence            456799999999999988899999999999999999999999963221           11111111 0          0


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHH---HHHHHHHHHHhhhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV---TGLVSKMYLESKNWADK  367 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev---l~~L~~~~~~~~~~~~~  367 (381)
                        ....+..++.++.+|+.+||+.||++||++.++   -+.+++-+.....|...
T Consensus       212 --~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~  264 (320)
T cd05590         212 --EVVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKL  264 (320)
T ss_pred             --CCCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence              112233456789999999999999999998442   33344444544555443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.3e-35  Score=271.43  Aligned_cols=231  Identities=18%  Similarity=0.267  Sum_probs=171.0

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+      .+..+++|........ ....+.+|++++++++||||+++++++...+..|+||||+
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   89 (283)
T cd05090          10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL   89 (283)
T ss_pred             eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence            46799999999999985      2467888876543222 3467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCC-----------------CCccch-----------------HHHHHHhhhcceeecccCCCccceEE
Q 016850          170 SGANLADCLRNPRN-----------------PSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       170 ~~gsL~~~l~~~~~-----------------~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl  215 (381)
                      ++|+|.+++.....                 ....++                 ...|++|+|+||+++++    ..+||
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~----~~~kl  165 (283)
T cd05090          90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ----LHVKI  165 (283)
T ss_pred             CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC----CcEEe
Confidence            99999999853221                 111111                 12345778999999887    55999


Q ss_pred             cccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhH
Q 016850          216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~  294 (381)
                      +|||+++.....  ..........++..|+|||++.+..++.++|||||||++|||++ |..||.....        ...
T Consensus       166 ~dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--------~~~  235 (283)
T cd05090         166 SDLGLSREIYSA--DYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--------QEV  235 (283)
T ss_pred             ccccccccccCC--cceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence            999999764221  11112234456788999999988889999999999999999998 9888853211        011


Q ss_pred             HHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          295 VDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      .               +.+........+..+++.+.+++.+||+.||++||++.+|++.|+.
T Consensus       236 ~---------------~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         236 I---------------EMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             H---------------HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            1               1111111122333456789999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.1e-35  Score=275.87  Aligned_cols=244  Identities=15%  Similarity=0.214  Sum_probs=174.9

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|++.  ++.+|+|+.....   ......+.+|+.++.++ +|||||++++++.+.+.+++||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~   81 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG   81 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence            5899999999999985  6789999876432   22345678899998877 8999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|..++......+...+..+                 |++|+|+||+++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~----~~~kL~DfG~~~~~~~----~~~~~  153 (329)
T cd05618          82 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCKEGLR----PGDTT  153 (329)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC----CCEEEeeCCccccccC----CCCcc
Confidence            99999877665554433322                 34667999999876    5699999999875321    11123


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.........   ...........+..          .
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~---~~~~~~~~~~~i~~----------~  220 (329)
T cd05618         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP---DQNTEDYLFQVILE----------K  220 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCc---ccccHHHHHHHHhc----------C
Confidence            3567999999999999989999999999999999999999999642221110   00111111111111          1


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH---HHHHHHHHHHHhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ---VTGLVSKMYLESKNWA  365 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e---vl~~L~~~~~~~~~~~  365 (381)
                        ....|...+..+.+|+.+||+.||++||++..   +.+.+++-+....+|.
T Consensus       221 --~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~  271 (329)
T cd05618         221 --QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD  271 (329)
T ss_pred             --CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence              11234456778999999999999999999531   2233444444444554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=3e-36  Score=280.32  Aligned_cols=237  Identities=19%  Similarity=0.226  Sum_probs=177.3

Q ss_pred             cccccCCCceEEEEEE-----CCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTI-----RGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      +.||+|+||.||++..     .++.+|+|++......  ....+.+|+++|++++||||+++++++.+.+.+|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            4689999999999875     3688999987543322  34567789999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++......++..+..++                 ++|+|+||+++++    +.+||+|||+++....    ...
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kL~Dfg~~~~~~~----~~~  153 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE----GHIKLTDFGLSKESID----HEK  153 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCC----CcEEEeeccCCcccCC----CCC
Confidence            99999999876655544443332                 3566888888876    5599999999876422    112


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+.......          
T Consensus       154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----------~~~~~~i~~----------  212 (318)
T cd05582         154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----------KETMTMILK----------  212 (318)
T ss_pred             ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----------HHHHHHHHc----------
Confidence            23456799999999999888899999999999999999999999963211           111111110          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH--HHHHHHHHHHHhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ--VTGLVSKMYLESKNWAD  366 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e--vl~~L~~~~~~~~~~~~  366 (381)
                       .  ....+..+++.+.+|+.+||+.||.+||++.+  +.+.++.-+.+..+|..
T Consensus       213 -~--~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~  264 (318)
T cd05582         213 -A--KLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNK  264 (318)
T ss_pred             -C--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHH
Confidence             0  11233445678999999999999999999877  55556554444444443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=5e-35  Score=262.83  Aligned_cols=229  Identities=17%  Similarity=0.283  Sum_probs=169.9

Q ss_pred             cccccCCCceEEEEEE--CCceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           98 KKFTSSSASASWRGTI--RGKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      +.||+|+||.||+|++  .++.+++|....... .....+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            3689999999999988  478888887543322 2356789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ...+..+..                 .|.+|+|.||+++++    ..+||+|||++......  .......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~----~~~kl~dfg~~~~~~~~--~~~~~~~  154 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEK----NVLKISDFGMSREEEDG--VYASTGG  154 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCC----CcEEECccccCcccccc--cccccCC
Confidence            99997543 233333222                 234667999999876    56999999998754211  0011111


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||.+.++.++.++|||||||++|||++ |..||......        .    ..           ..+..
T Consensus       155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~----~~-----------~~~~~  211 (252)
T cd05084         155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------Q----TR-----------EAIEQ  211 (252)
T ss_pred             CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------H----HH-----------HHHHc
Confidence            1223567999999988889999999999999999998 88888532110        0    00           11111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      ......+..++..+.+|+.+||+.||++||++.++++.|+
T Consensus       212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         212 GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            1222334455678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.3e-35  Score=278.30  Aligned_cols=233  Identities=16%  Similarity=0.232  Sum_probs=175.2

Q ss_pred             cccccccCCCceEEEEEECC---ceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRG---KDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~---~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|.+.+   ..||+|+.....   ....+.+.+|+.+++.++|||||++++++.+.+.+|+||||+
T Consensus        34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~  113 (340)
T PTZ00426         34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFV  113 (340)
T ss_pred             EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCC
Confidence            35779999999999998742   478888764332   223567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.+++..........+..                 +|++|+|+|||++.+    +.+||+|||+++....      
T Consensus       114 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~----~~ikL~DFG~a~~~~~------  183 (340)
T PTZ00426        114 IGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKD----GFIKMTDFGFAKVVDT------  183 (340)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC----CCEEEecCCCCeecCC------
Confidence            9999999998766655443322                 234677999999876    5699999999976421      


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                       ......||+.|+|||++.+..++.++|||||||++|||++|+.||......        ....   ...          
T Consensus       184 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~---~i~----------  241 (340)
T PTZ00426        184 -RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQ---KIL----------  241 (340)
T ss_pred             -CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHH---HHh----------
Confidence             123467999999999999888999999999999999999999999632110        0011   111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~  366 (381)
                       ...  ..++..+++.+.+++.+||+.||++|+     ++.+++   +.-+....+|..
T Consensus       242 -~~~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~---~hp~f~~~~~~~  294 (340)
T PTZ00426        242 -EGI--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVK---EHPWFGNIDWVS  294 (340)
T ss_pred             -cCC--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHH---cCCCcCCCCHHH
Confidence             111  123344567889999999999999995     777764   333444445544

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=3.2e-35  Score=274.65  Aligned_cols=245  Identities=16%  Similarity=0.206  Sum_probs=175.9

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|.+.  ++.||+|+++...   ....+.+.+|+.++..+ +||||+++++++.+.+.+|+|||||++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g   81 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG   81 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            5899999999999985  7789999875432   22345688899999998 7999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++...+..+...+..+                 |++|+|+||+++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~----~~~kL~Dfg~~~~~~~----~~~~~  153 (329)
T cd05588          82 DLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE----GHIKLTDYGMCKEGIR----PGDTT  153 (329)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----CCEEECcCcccccccc----CCCcc
Confidence            99999977666655444332                 34567999999876    5699999999874211    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.........   .....+...+.+.          ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~---~~~~~~~~~~~~~----------~~  220 (329)
T cd05588         154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNP---DQNTEDYLFQVIL----------EK  220 (329)
T ss_pred             ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccc---cccchHHHHHHHH----------cC
Confidence            4567999999999999989999999999999999999999999643221100   0011111111111          11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH---HHHHHHHHHHHhhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ---VTGLVSKMYLESKNWAD  366 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e---vl~~L~~~~~~~~~~~~  366 (381)
                        ....|..++..+.+++.+||+.||.+|+++..   +.+.+++-+....+|..
T Consensus       221 --~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~  272 (329)
T cd05588         221 --QIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDL  272 (329)
T ss_pred             --CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHH
Confidence              11233445678999999999999999998431   23334443444444543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=9.1e-36  Score=271.71  Aligned_cols=238  Identities=14%  Similarity=0.174  Sum_probs=170.6

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||+|+||.||++...  ++.+|+|+......   .....+..|++++++++||||+++++++.++..+++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999885  78899988653221   1234566799999999999999999999999999999999999999


Q ss_pred             HHHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++.....  .....+..                 .|++|+|+||+++++    ..++|+|||++.....     ....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~----~~~~l~Dfg~~~~~~~-----~~~~  151 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ----GNCRLSDLGLAVELKD-----GKTI  151 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC----CCEEEeeceeeeecCC-----Ccee
Confidence            998865432  23222221                 123567899999876    5599999999876432     1122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....|+..|+|||++.+..++.++|||||||++|||++|+.||.......       .........           ...
T Consensus       152 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-------~~~~~~~~~-----------~~~  213 (277)
T cd05607         152 TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-------AKEELKRRT-----------LED  213 (277)
T ss_pred             eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-------hHHHHHHHh-----------hcc
Confidence            34568999999999998889999999999999999999999996422110       011111111           111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH-HHHHHHHHhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG-LVSKMYLESKNWA  365 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~-~L~~~~~~~~~~~  365 (381)
                      .... ....+++++.+|+.+||+.||++||++.|+++ .++.-+.+..+|.
T Consensus       214 ~~~~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~  263 (277)
T cd05607         214 EVKF-EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFP  263 (277)
T ss_pred             cccc-ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHH
Confidence            1110 11245678999999999999999999988763 3344444444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=6.4e-36  Score=279.83  Aligned_cols=244  Identities=18%  Similarity=0.226  Sum_probs=174.8

Q ss_pred             cccccccCCCceEEEEEE-----CCceEEEEEecccc----cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTI-----RGKDVIIFQRKLRR----SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||.||+++.     .++.||+|+.....    ....+.+.+|++++.++ +||||+++++++.+.+.+++|
T Consensus         4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (332)
T cd05614           4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI   83 (332)
T ss_pred             EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence            356799999999999876     36789999865322    12345688899999999 599999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+++|+|.+++..........+..+                 |+||+|+|||++.+    +.+||+|||+++.+..  
T Consensus        84 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~----~~~kl~DfG~~~~~~~--  157 (332)
T cd05614          84 LDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSE----GHVVLTDFGLSKEFLS--  157 (332)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCC----CCEEEeeCcCCccccc--
Confidence            999999999999987666554443322                 34677999999886    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                       ..........||+.|+|||++.+. .++.++|||||||++|||++|+.||.......        ........+.    
T Consensus       158 -~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--------~~~~~~~~~~----  224 (332)
T cd05614         158 -EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN--------TQSEVSRRIL----  224 (332)
T ss_pred             -cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC--------CHHHHHHHHh----
Confidence             111223346799999999998765 47899999999999999999999996332210        0011111110    


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH--HHHHHHHHHHHHhhhhhh
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR--QVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~--evl~~L~~~~~~~~~~~~  366 (381)
                              ......+..+++.+.+++.+||+.||++||++.  .+-+.++.-+.+...|..
T Consensus       225 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~  277 (332)
T cd05614         225 --------KCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEA  277 (332)
T ss_pred             --------cCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence                    011223445677899999999999999999544  333334444444444433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.4e-35  Score=272.41  Aligned_cols=241  Identities=14%  Similarity=0.141  Sum_probs=166.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+....... ....+.+|+.+++.++||||+++++++.+.+..++||||++ +
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~   87 (303)
T cd07869           9 KLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-T   87 (303)
T ss_pred             EeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-c
Confidence            4578999999999999985  788999987644332 34567889999999999999999999999999999999995 7


Q ss_pred             CHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..                 +|++|+|+||++++.    +.+||+|||+++....    ....
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~----~~~~  159 (303)
T cd07869          88 DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT----GELKLADFGLARAKSV----PSHT  159 (303)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC----CCEEECCCCcceeccC----CCcc
Confidence            8888886543 233322222                 234677999999876    5599999999875321    1122


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-ccchh--
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-VGGVR--  310 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--  310 (381)
                      .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+.       .............. ...+.  
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  232 (303)
T cd07869         160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI-------QDQLERIFLVLGTPNEDTWPGV  232 (303)
T ss_pred             CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH-------HHHHHHHHHHhCCCChhhccch
Confidence            344668999999998865 45789999999999999999999999743210       01111111100000 00000  


Q ss_pred             ----hhhcccccCCCC---------HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 ----KWVDRRLKDSYP---------VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ----~~~~~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          ...........+         ...++.+.+|+.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                000000000000         012357889999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.4e-35  Score=275.54  Aligned_cols=237  Identities=20%  Similarity=0.267  Sum_probs=172.9

Q ss_pred             cccccccCCCceEEEEEEC--Cc----eEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GK----DVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~----~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|++.  +.    .||+|+...... ...+++.+|+.+++.++||||++++|++... ..++|+||
T Consensus        11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~   89 (316)
T cd05108          11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL   89 (316)
T ss_pred             eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeeec
Confidence            3567999999999999873  33    378887654322 2456788999999999999999999998865 56799999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++.... ......+..                 +|++|+|+||+++++    ..+||+|||+++.+....  
T Consensus        90 ~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~----~~~kl~DfG~a~~~~~~~--  163 (316)
T cd05108          90 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGADE--  163 (316)
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCC----CcEEEccccccccccCCC--
Confidence            99999999998743 233222222                 234677899999876    559999999998753211  


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........++..|+|||++.+..++.++|||||||++|||++ |+.||......        .    ...         
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--------~----~~~---------  222 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--------E----ISS---------  222 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--------H----HHH---------
Confidence            1111222345678999999998899999999999999999998 99998532110        0    011         


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                        ++........+..++..+.+++.+||..||.+||++.+++..|..+..+..
T Consensus       223 --~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         223 --ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             --HHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence              111111112233455678999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.7e-35  Score=274.48  Aligned_cols=223  Identities=17%  Similarity=0.199  Sum_probs=168.8

Q ss_pred             cccccCCCceEEEEEE-----CCceEEEEEecccc----cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           98 KKFTSSSASASWRGTI-----RGKDVIIFQRKLRR----SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      +.||+|+||.||+++.     .++.||+|......    ......+.+|+.+|+.++||||+++++++..++.+|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5689999999999986     36789999865422    12345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +++|+|.+++..........+..                 +|++|+|+|||++.+    +.+||+|||+++....    .
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~  153 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQ----GHVKLTDFGLCKESIH----E  153 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----CCEEEeeCcCCeeccc----C
Confidence            99999999998766544333221                 234667999999876    5699999999875321    1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........         
T Consensus       154 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----------~~~~~~~~---------  213 (323)
T cd05584         154 GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----------KKTIDKIL---------  213 (323)
T ss_pred             CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----------HHHHHHHH---------
Confidence            1223346799999999999888899999999999999999999999963211           11111111         


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~  352 (381)
                        ..  ....+..+++.+.+|+.+||+.||++||     ++.++++
T Consensus       214 --~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         214 --KG--KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             --cC--CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence              11  1122344567899999999999999999     6777654

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=6.6e-35  Score=263.06  Aligned_cols=231  Identities=18%  Similarity=0.279  Sum_probs=170.0

Q ss_pred             ccccCCCceEEEEEEC----CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR----GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||+|.+.    +..||+|+....... ..+.+.+|+.++++++||||+++++++.. +..++||||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            4899999999999874    345788876544322 34678999999999999999999998764 56899999999999


Q ss_pred             HHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... ..++..+..+                 |++|+|.||+++.+    ..+||+|||++......... ....
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~----~~~kl~dfg~~~~~~~~~~~-~~~~  155 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ----HYAKISDFGLSKALGADDSY-YKAR  155 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC----CcEEeccCCccccccCCccc-eecc
Confidence            999997533 3343333322                 33667999999876    56999999999764321111 1111


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||++.+..++.++|||||||++||+++ |..||......           +            +...+.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----------~------------~~~~~~  212 (257)
T cd05115         156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-----------E------------VMSFIE  212 (257)
T ss_pred             CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-----------H------------HHHHHH
Confidence            22334678999999988889999999999999999996 99998643210           0            111111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      .......+..+++++.+++.+||..||++||++.+|.+.|+.++
T Consensus       213 ~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~  256 (257)
T cd05115         213 QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY  256 (257)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence            11223344456788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5e-35  Score=263.71  Aligned_cols=232  Identities=19%  Similarity=0.282  Sum_probs=171.8

Q ss_pred             cccccCCCceEEEEEEC--C---ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR--G---KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~---~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|.+.  +   ..+++|........ ..+++.+|+++++++.|||||++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            36899999999999874  2   56888876544332 4567899999999999999999999876 4568999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.++|.......+..+..++                 .+|+|+||+++++    ..+||+|||+++.+..... ....
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~----~~~kl~df~~~~~~~~~~~-~~~~  154 (257)
T cd05060          80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR----HQAKISDFGMSRALGAGSD-YYRA  154 (257)
T ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC----CcEEeccccccceeecCCc-cccc
Confidence            9999999876655544443332                 3566999999876    5699999999986532111 1111


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....++..|+|||.+.+..++.++|||||||++||+++ |..||.....        ......               +
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~---------------~  211 (257)
T cd05060         155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAM---------------L  211 (257)
T ss_pred             ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHH---------------H
Confidence            122234578999999988889999999999999999998 9999863221        011111               1


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ........+..++..+.+++.+||..||++||++.++++.|++++
T Consensus       212 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         212 ESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            111112233445678999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.4e-35  Score=264.94  Aligned_cols=231  Identities=24%  Similarity=0.356  Sum_probs=171.4

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ..++||+|+||.||+|++. +..|++|+.... ....+++.+|++++++++||||+++++++.. +..++||||+++|+|
T Consensus        10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L   87 (262)
T cd05071          10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL   87 (262)
T ss_pred             EeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCCCCcH
Confidence            4678999999999999886 456778776432 2345789999999999999999999998754 557999999999999


Q ss_pred             HHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++....  ...+..+..                 .|.+|+|.||+++++    ..+||+|||+++.+...   .....
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~----~~~~L~dfg~~~~~~~~---~~~~~  160 (262)
T cd05071          88 LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDN---EYTAR  160 (262)
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCC----CcEEeccCCceeecccc---ccccc
Confidence            99997632  223222222                 234567999999876    56999999999765321   11112


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||++.+..++.++|||||||++|||++ |..||......        ...    ..+.           
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~----~~~~-----------  217 (262)
T cd05071         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVL----DQVE-----------  217 (262)
T ss_pred             cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHH----HHHh-----------
Confidence            23446778999999988889999999999999999999 88888532210        011    1110           


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      .......+..++..+.+++.+||+.||++||++.++++.|+++|
T Consensus       218 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         218 RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            01111223456678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.6e-35  Score=265.26  Aligned_cols=234  Identities=17%  Similarity=0.229  Sum_probs=167.1

Q ss_pred             ccccCCCceEEEEEEC-----CceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEE-eCCeeeEEEeccCC
Q 016850           99 KFTSSSASASWRGTIR-----GKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYEHVSG  171 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lv~e~~~~  171 (381)
                      .||+|+||.||+|.+.     ...+++|+..... ....+.+.+|+.+++.++||||+++++++. .++..++||||+++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            5899999999999863     2467888754322 224567889999999999999999999876 45568899999999


Q ss_pred             CCHHHHhcCCCC-CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNPRN-PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~~~-~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++..... .....+.                 ..|++|+|+||+++++    ..+||+|||+++...........
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~----~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          82 GDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES----FTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC----CcEEECCccccccccCCcceeec
Confidence            999999976432 2222211                 1234677999999876    56999999999764321111111


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhC-CccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG-EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......++..|+|||.+.+..++.++|||||||++|||++| .+||.....           .+.......         
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----------~~~~~~~~~---------  217 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-----------FDITVYLLQ---------  217 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-----------HHHHHHHhc---------
Confidence            12234567899999999888899999999999999999995 556642211           111111110         


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                         ......+..+++.+.+++.+||+.+|++||++.++++.|++++.
T Consensus       218 ---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         218 ---GRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             ---CCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence               01111223345689999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-36  Score=283.36  Aligned_cols=249  Identities=14%  Similarity=0.176  Sum_probs=177.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.||||++....   ......+.+|+.+|+.++||||+++++++.+.+.+|||||||+
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~   84 (364)
T cd05599           5 SIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLP   84 (364)
T ss_pred             EEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCC
Confidence            3567999999999999985  7889999875432   2234567889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc--
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE--  231 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~--  231 (381)
                      +|+|.+++.....+.+..+..+                 |++|+|+|||++.+    +.+||+|||+++.+.......  
T Consensus        85 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~----~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          85 GGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAK----GHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----CCEEEeecccceecccccccccc
Confidence            9999999987665554443322                 34667999999876    569999999987542211000  


Q ss_pred             --------------------------------cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcccc
Q 016850          232 --------------------------------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLK  279 (381)
Q Consensus       232 --------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~  279 (381)
                                                      .......+||+.|+|||++.+..++.++|||||||++|||++|..||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence                                            001123579999999999998899999999999999999999999996


Q ss_pred             ccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          280 FVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      ....           .+........         ...+.......+++.+.+||.+||. +|.+|++...+.+.|+.-+.
T Consensus       241 ~~~~-----------~~~~~~i~~~---------~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~  299 (364)
T cd05599         241 SDNP-----------QETYRKIINW---------KETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF  299 (364)
T ss_pred             CCCH-----------HHHHHHHHcC---------CCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence            3221           1111111100         0001111111356789999999996 99999983333333555555


Q ss_pred             HhhhhhhhcC
Q 016850          360 ESKNWADKIG  369 (381)
Q Consensus       360 ~~~~~~~~~~  369 (381)
                      ...+|.....
T Consensus       300 ~~~~~~~~~~  309 (364)
T cd05599         300 KGVDWEHIRE  309 (364)
T ss_pred             CCCCHHHHhh
Confidence            5556655433

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.6e-35  Score=267.62  Aligned_cols=231  Identities=21%  Similarity=0.279  Sum_probs=168.3

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ....||+|+||.||+|.+.       +..||+|+...... ....++.+|+.+++.++||||+++++++.+....++|||
T Consensus        10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e   89 (277)
T cd05062          10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME   89 (277)
T ss_pred             eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEe
Confidence            4567899999999999864       34688887543222 234568899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC----------CCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccc
Q 016850          168 HVSGANLADCLRNPRN----------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~----------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      |+++|+|.+++.....          .....+..                 .|.+|+|.||+++++    +.++|+|||+
T Consensus        90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~----~~~~l~dfg~  165 (277)
T cd05062          90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----FTVKIGDFGM  165 (277)
T ss_pred             cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC----CCEEECCCCC
Confidence            9999999999975321          11122211                 223567999999976    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++.+....  .........+++.|+|||++.+..++.++|||||||++|||++ |..||......        ....   
T Consensus       166 ~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~~~---  232 (277)
T cd05062         166 TRDIYETD--YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QVLR---  232 (277)
T ss_pred             ccccCCcc--eeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHH---
Confidence            87643211  1111122356789999999988889999999999999999999 78888532110        1111   


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      ....            ......+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus       233 ~~~~------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         233 FVME------------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHc------------CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            0110            0011123345568999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=6.7e-35  Score=264.23  Aligned_cols=232  Identities=22%  Similarity=0.296  Sum_probs=172.8

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.     ...|++|........ ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   88 (266)
T cd05033           9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYME   88 (266)
T ss_pred             eeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCC
Confidence            567899999999999984     246788876443322 35678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... ......+..                 .|.+|+|.||+++++    ..++|+|||+++.+...  ...
T Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~----~~~~l~dfg~~~~~~~~--~~~  162 (266)
T cd05033          89 NGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN----LVCKVSDFGLSRRLEDS--EAT  162 (266)
T ss_pred             CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC----CCEEECccchhhccccc--ccc
Confidence            999999997643 333333322                 233567999999886    56999999999876311  111


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.....        ....+.              
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~--------------  220 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--------QDVIKA--------------  220 (266)
T ss_pred             eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--------HHHHHH--------------
Confidence            11123345678999999988889999999999999999998 9999853211        011111              


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                       +........+..+++.+.+|+.+||+.||++||++.+|++.|+++
T Consensus       221 -~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         221 -VEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             -HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence             111111122334567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=4.6e-35  Score=262.72  Aligned_cols=227  Identities=19%  Similarity=0.294  Sum_probs=168.5

Q ss_pred             ccccCCCceEEEEEEC-CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           99 KFTSSSASASWRGTIR-GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      .||+|+||.||+|... ++.+++|+....... ....+.+|++++++++||||+++++++...+..++||||+++|+|.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            5899999999999875 667888875443322 34568899999999999999999999999999999999999999999


Q ss_pred             HhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccccc
Q 016850          177 CLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKI  238 (381)
Q Consensus       177 ~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  238 (381)
                      ++.... ......+..                 +|.+|+|+||+++++    ..+||+|||++.....   .........
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~----~~~~l~d~g~~~~~~~---~~~~~~~~~  154 (250)
T cd05085          82 FLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGEN----NVLKISDFGMSRQEDD---GIYSSSGLK  154 (250)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCC----CeEEECCCccceeccc---cccccCCCC
Confidence            987543 223232222                 234677999999876    5699999999875322   111111223


Q ss_pred             CCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          239 EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       239 ~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      .++..|+|||++.++.++.++||||||+++|++++ |..||......        ...    ..           +....
T Consensus       155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~----~~-----------~~~~~  211 (250)
T cd05085         155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAR----EQ-----------VEKGY  211 (250)
T ss_pred             CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHH----HH-----------HHcCC
Confidence            45678999999988889999999999999999998 99998632210        000    00           11111


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      ....+..++..+.+++.+||..+|++||++.++++.|.
T Consensus       212 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         212 RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            12223345678999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=5.5e-36  Score=283.33  Aligned_cols=252  Identities=16%  Similarity=0.214  Sum_probs=184.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||++...  ++.||+|++....   ......+.+|+.++.+++||||+++++.+.+.+.+|||||||++
T Consensus         6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g   85 (360)
T cd05627           6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG   85 (360)
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence            467899999999999985  7789999875432   22356788899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC----
Q 016850          172 ANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN----  230 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~----  230 (381)
                      |+|.+++..........+..                 +|++|+|+|||++.+    +.+||+|||+++.+......    
T Consensus        86 g~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~----~~vkL~DfG~~~~~~~~~~~~~~~  161 (360)
T cd05627          86 GDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAK----GHVKLSDFGLCTGLKKAHRTEFYR  161 (360)
T ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCC----CCEEEeeccCCccccccccccccc
Confidence            99999998766655444332                 234677999999876    56999999998754211000    


Q ss_pred             ---------------------------ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcccccccc
Q 016850          231 ---------------------------ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFD  283 (381)
Q Consensus       231 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~  283 (381)
                                                 ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~  241 (360)
T cd05627         162 NLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (360)
T ss_pred             ccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH
Confidence                                       00111245799999999999999999999999999999999999999964221


Q ss_pred             CCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhh
Q 016850          284 EGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN  363 (381)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~  363 (381)
                      .           ........        + ...+.......+++++.+||.+|+. ||.+|++...+.+.+++-+....+
T Consensus       242 ~-----------~~~~~i~~--------~-~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         242 Q-----------ETYRKVMN--------W-KETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             H-----------HHHHHHHc--------C-CCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCC
Confidence            0           11011110        0 0001000011256789999999774 999999877777777888888888


Q ss_pred             hhhhcCCCcc
Q 016850          364 WADKIGFPTD  373 (381)
Q Consensus       364 ~~~~~~~~~~  373 (381)
                      |......+..
T Consensus       301 ~~~~~~~~~~  310 (360)
T cd05627         301 WGHIRERPAA  310 (360)
T ss_pred             HHHHhcCCCC
Confidence            8877655544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=2e-35  Score=275.69  Aligned_cols=238  Identities=15%  Similarity=0.178  Sum_probs=175.1

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHH-HHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLS-VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|++.  ++.+|+|+......   .....+.+|.. +++.++||||+++++++.+.+.+|+||||+++|
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            5899999999999985  56788988654321   12334455544 567789999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++..........+..                 +|++|+|+|||++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~----~~~kl~DfG~a~~~~~----~~~~~  153 (325)
T cd05602          82 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ----GHIVLTDFGLCKENIE----HNGTT  153 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----CCEEEccCCCCccccc----CCCCc
Confidence            9999998765554333322                 234677999999876    5699999999875321    12223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|++||.....           .+......           ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~-----------~~  211 (325)
T cd05602         154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----------AEMYDNIL-----------NK  211 (325)
T ss_pred             ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----------HHHHHHHH-----------hC
Confidence            456799999999999998999999999999999999999999963211           11111111           00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH-HHHHHHHHHHHhhhhhhhc
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ-VTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-vl~~L~~~~~~~~~~~~~~  368 (381)
                        ....+..+++.+.+++.+||+.||.+||++.+ +.+.++..+....+|....
T Consensus       212 --~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~  263 (325)
T cd05602         212 --PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLI  263 (325)
T ss_pred             --CcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHH
Confidence              11123346678999999999999999999875 4455666666666776654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.1e-35  Score=273.25  Aligned_cols=222  Identities=16%  Similarity=0.208  Sum_probs=167.3

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|.+.  ++.||+|+.....   ....+.+..|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            35899999999999985  6789999875432   22455677788888765 899999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++.........++..                 +|++|+|+||+++.+    +.+||+|||+++....    ....
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~  152 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD----GHIKIADFGMCKENVF----GDNR  152 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----CCEEeCccCCCeeccc----CCCc
Confidence            99999998765555433322                 234677999999876    5699999999864211    1122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......        ....    .+..          
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~----~~~~----------  210 (316)
T cd05620         153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFE----SIRV----------  210 (316)
T ss_pred             eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHH----HHHh----------
Confidence            34567999999999999889999999999999999999999999632210        1111    1100          


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-HHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-QVT  351 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl  351 (381)
                        .....+..++.++.+|+.+||+.||.+||++. +++
T Consensus       211 --~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         211 --DTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             --CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence              01122334567899999999999999999985 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9e-35  Score=262.64  Aligned_cols=230  Identities=20%  Similarity=0.310  Sum_probs=172.6

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+. ++.|++|..... ....+++.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (261)
T cd05068          11 LRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLL   89 (261)
T ss_pred             EEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHH
Confidence            577999999999999985 567888776432 234678999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  ...+..+..                 .|.+|+|+||+++++    ..+||+|||+++.....   ......
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~~l~dfg~~~~~~~~---~~~~~~  162 (261)
T cd05068          90 EYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGEN----NICKVADFGLARVIKED---IYEARE  162 (261)
T ss_pred             HHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCC----CCEEECCcceEEEccCC---cccccC
Confidence            9997644  333333222                 223567999999886    55999999999875421   111112


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||++.+..++.++||||||+++|||++ |+.||.....        .....    .           +..
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~----~-----------~~~  219 (261)
T cd05068         163 GAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQ----Q-----------VDQ  219 (261)
T ss_pred             CCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHH----H-----------HHc
Confidence            2233468999999988889999999999999999999 9999863211        00111    1           111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      ......+..++..+.+++.+||+.||.+||++.++++.|+++
T Consensus       220 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         220 GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            111222334567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.9e-35  Score=275.31  Aligned_cols=238  Identities=15%  Similarity=0.159  Sum_probs=175.7

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHH-HHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLS-VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|++.  ++.||+|++.....   .....+.+|.. +++.++|||||++++++.+.+..|+||||+++|
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG   81 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5899999999999984  67899998654321   12344555654 678899999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|..++..........+..                 +|++|+|+||+++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~~~~~~~----~~~~~  153 (321)
T cd05603          82 ELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ----GHVVLTDFGLCKEGVE----PEETT  153 (321)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----CCEEEccCCCCccCCC----CCCcc
Confidence            9999987665554333322                 234677999999876    5699999999875311    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ...... +          ...
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~-i----------~~~  211 (321)
T cd05603         154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----------SQMYDN-I----------LHK  211 (321)
T ss_pred             ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----------HHHHHH-H----------hcC
Confidence            456799999999999888899999999999999999999999963211           111111 1          111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-HHHHHHHHHHHHhhhhhhhc
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-QVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~L~~~~~~~~~~~~~~  368 (381)
                        ....+...+..+.+++.+||+.||.+||++. ++++.++..+....+|....
T Consensus       212 --~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~  263 (321)
T cd05603         212 --PLQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLY  263 (321)
T ss_pred             --CCCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHh
Confidence              1122334567899999999999999999864 66676776666666676543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=5.7e-35  Score=271.45  Aligned_cols=219  Identities=17%  Similarity=0.228  Sum_probs=165.7

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|.+.  ++.||+|.++...   ....+.+..|..++..+ +||||+++++++.+.+.+++||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5899999999999985  6679999875432   22345566777777754 8999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++......+...+..+                 |++|+|+||+++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~----~~~kL~Dfg~a~~~~~----~~~~~  153 (316)
T cd05592          82 DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD----GHIKIADFGMCKENMN----GEGKA  153 (316)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC----CCEEEccCcCCeECCC----CCCcc
Confidence            99999987665554443332                 23567889888876    5699999999975321    11233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......        ...    ..+..           
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~----~~i~~-----------  210 (316)
T cd05592         154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELF----DSILN-----------  210 (316)
T ss_pred             ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHH----HHHHc-----------
Confidence            4567999999999999888999999999999999999999999642210        011    11100           


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                       ..+.++..++.++.+|+.+||+.||.+||++.+
T Consensus       211 -~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~  243 (316)
T cd05592         211 -DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDG  243 (316)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence             112234456678999999999999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.3e-35  Score=279.32  Aligned_cols=245  Identities=14%  Similarity=0.160  Sum_probs=173.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|...  ++.||+|+......   .....+.+|+.++.+++||||+++++.+.+.+.+|||||||+
T Consensus         5 ~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~   84 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLP   84 (363)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCC
Confidence            3567999999999999885  78899998754321   234568889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC---
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---  230 (381)
                      +|+|.+++..........+..                 +|+||+|+|||++.+    +.+||+|||+++.+......   
T Consensus        85 gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~----~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          85 GGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK----GHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC----CCEEEeeccCccccccccccccc
Confidence            999999998766655444332                 234677999999876    56999999998764321000   


Q ss_pred             ----------------------------ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccc
Q 016850          231 ----------------------------ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVF  282 (381)
Q Consensus       231 ----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~  282 (381)
                                                  ........+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence                                        0001134579999999999998899999999999999999999999996322


Q ss_pred             cCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCC---CCCChHHHHHHHHHHHH
Q 016850          283 DEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPG---KRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~---~RPs~~evl~~L~~~~~  359 (381)
                      .           .+........         ...+.......+++++.+++.+++. +|.   .||++.||++   +-+.
T Consensus       241 ~-----------~~~~~~i~~~---------~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~---hp~f  296 (363)
T cd05628         241 P-----------QETYKKVMNW---------KETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT---NPFF  296 (363)
T ss_pred             H-----------HHHHHHHHcC---------cCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC---CCCC
Confidence            1           0111111100         0000000011246788899988664 444   4578888854   4445


Q ss_pred             Hhhhhhhhc
Q 016850          360 ESKNWADKI  368 (381)
Q Consensus       360 ~~~~~~~~~  368 (381)
                      +..+|....
T Consensus       297 ~~~~~~~~~  305 (363)
T cd05628         297 EGVDWEHIR  305 (363)
T ss_pred             CCCCHHHHH
Confidence            555666553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=5.4e-35  Score=271.89  Aligned_cols=217  Identities=17%  Similarity=0.196  Sum_probs=166.3

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|.+.  ++.||+|++....   ......+.+|+.++..+ +||||+++++++.+.+.+|+||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG   81 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5899999999999985  6789999875432   22456678899999888 7999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++......++.++..+                 |++|+|+||+++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~----~~~~~  153 (318)
T cd05570          82 DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE----GHIKIADFGMCKEGIL----GGVTT  153 (318)
T ss_pred             CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC----CcEEecccCCCeecCc----CCCcc
Confidence            99999987766655443332                 23566899999876    5699999999865211    11222


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||......        ..    ...+.          ..
T Consensus       154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~----~~~i~----------~~  211 (318)
T cd05570         154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------EL----FQSIL----------ED  211 (318)
T ss_pred             cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HH----HHHHH----------cC
Confidence            3457999999999999999999999999999999999999999632210        01    11110          00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCCh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM  347 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~  347 (381)
                        ...++..+++.+.+||.+||+.||.+||++
T Consensus       212 --~~~~~~~~~~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         212 --EVRYPRWLSKEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             --CCCCCCcCCHHHHHHHHHHccCCHHHcCCC
Confidence              112234456789999999999999999999

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=5.3e-35  Score=268.18  Aligned_cols=240  Identities=13%  Similarity=0.145  Sum_probs=168.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||.|+||.||+|...  ++.||+|+....... ....+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus         9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~   87 (288)
T cd07871           9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-S   87 (288)
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-c
Confidence            3567999999999999885  778999987554332 34567899999999999999999999999999999999996 6


Q ss_pred             CHHHHhcCCCC-CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRN-PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~-~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++..... .+...+.                 .+|++|+|+|||++++    +.+||+|||+++....    ....
T Consensus        88 ~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~----~~~kl~DfG~~~~~~~----~~~~  159 (288)
T cd07871          88 DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK----GELKLADFGLARAKSV----PTKT  159 (288)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC----CCEEECcCcceeeccC----CCcc
Confidence            99999875432 3332222                 2344677999999886    5699999999976422    1122


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC--------
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG--------  305 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  305 (381)
                      .....|++.|+|||++.+ ..++.++|||||||++|||++|++||......        .............        
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  231 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--------EELHLIFRLLGTPTEETWPGI  231 (288)
T ss_pred             ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCChHHhhcc
Confidence            334568999999998865 56899999999999999999999999643211        1111111110000        


Q ss_pred             --ccchhhhhcccccCC----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 --VGGVRKWVDRRLKDS----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 --~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ...+.....+.....    .....+.++++|+.+||+.||.+|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         232 TSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             ccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence              000011110110000    01134567899999999999999999999974

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=4.7e-35  Score=267.64  Aligned_cols=231  Identities=17%  Similarity=0.220  Sum_probs=170.7

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|...       +..||+|+....... ..+.+.+|+.++.+++|||||++++++...+..++++||
T Consensus        10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~   89 (283)
T cd05091          10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY   89 (283)
T ss_pred             HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence            467999999999999873       367888887544332 246688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC----------------CCCcc-------chH----------HHHHHhhhcceeecccCCCccceEE
Q 016850          169 VSGANLADCLRNPR----------------NPSFT-------VLS----------TWLSRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       169 ~~~gsL~~~l~~~~----------------~~~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~~~kl  215 (381)
                      +++++|.+++....                .....       ++.          ..|++|+|.||+++++    ..+||
T Consensus        90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~----~~~kl  165 (283)
T cd05091          90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK----LNVKI  165 (283)
T ss_pred             CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC----CceEe
Confidence            99999999985321                11111       111          2345677999999876    55999


Q ss_pred             cccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhH
Q 016850          216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~  294 (381)
                      +|||+++.....  ..........+++.|+|||++.++.++.++|||||||++|||++ |..||.....           
T Consensus       166 ~Dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----------  232 (283)
T cd05091         166 SDLGLFREVYAA--DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----------  232 (283)
T ss_pred             cccccccccccc--hheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----------
Confidence            999998764321  11112234456789999999988889999999999999999998 8888753211           


Q ss_pred             HHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          295 VDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      .+.....            ........+..++..+.+|+.+||+.||++||++.+|+..|+.
T Consensus       233 ~~~~~~i------------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         233 QDVIEMI------------RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHH------------HcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            1111111            1111122344566789999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.3e-34  Score=267.96  Aligned_cols=239  Identities=22%  Similarity=0.314  Sum_probs=176.2

Q ss_pred             CcccccccCCCceEEEEEECC---------ceEEEEEecccc-cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeee
Q 016850           95 FLAKKFTSSSASASWRGTIRG---------KDVIIFQRKLRR-SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        95 f~~~~lg~G~~g~V~~~~~~~---------~~v~vk~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~  163 (381)
                      ...+.||+|+||.||++.+.+         ..+|+|...... .....++.+|+++++++ +||||+++++++...+..+
T Consensus        21 ~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~  100 (307)
T cd05098          21 VLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLY  100 (307)
T ss_pred             EEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            356889999999999998632         358888765432 22456788999999999 8999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCCC----------------CCccchH-----------------HHHHHhhhcceeecccCCCc
Q 016850          164 LVYEHVSGANLADCLRNPRN----------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGS  210 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~----------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~  210 (381)
                      +||||+++|+|.++|.....                ..+..++                 ..|++|+|+||+++++    
T Consensus       101 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~----  176 (307)
T cd05098         101 VIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----  176 (307)
T ss_pred             EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCC----
Confidence            99999999999999976421                2222221                 2344677999999876    


Q ss_pred             cceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccc
Q 016850          211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGY  289 (381)
Q Consensus       211 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~  289 (381)
                      ..+||+|||+++.+...  ..........+++.|+|||++.+..++.++|||||||++|||++ |..||.....      
T Consensus       177 ~~~kL~dfg~a~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------  248 (307)
T cd05098         177 NVMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------  248 (307)
T ss_pred             CcEEECCCccccccccc--chhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------
Confidence            56999999998764321  11111122334578999999988889999999999999999998 8888853211      


Q ss_pred             cchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          290 RRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                           .+ ....           +........+..++.++.+|+.+||..+|.+||++.+|++.|++++....
T Consensus       249 -----~~-~~~~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         249 -----EE-LFKL-----------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             -----HH-HHHH-----------HHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence                 01 1111           11111222344566789999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.6e-35  Score=276.26  Aligned_cols=222  Identities=17%  Similarity=0.149  Sum_probs=168.4

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||++...  ++.||+|+......   .....+.+|++++..++||||+++++++.+.+.+||||||+++|+
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            5899999999999874  78899998754322   234567889999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHH------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPRNPSFTVLST------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.......+..+..                  +|++|+|+|||++.+    +.+||+|||+++....    .....
T Consensus        82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~----~~~kL~Dfg~~~~~~~----~~~~~  153 (325)
T cd05594          82 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD----GHIKITDFGLCKEGIK----DGATM  153 (325)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC----CCEEEecCCCCeecCC----CCccc
Confidence            999998766555433222                  234566888888776    5699999999875321    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .. ....+.          ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----------~~-~~~~i~----------~~  211 (325)
T cd05594         154 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----------EK-LFELIL----------ME  211 (325)
T ss_pred             ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----------HH-HHHHHh----------cC
Confidence            346799999999999988999999999999999999999999953211           00 001110          00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~  352 (381)
                        ...++..+++++.+|+.+||+.||++|+     ++.++++
T Consensus       212 --~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         212 --EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             --CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence              1122344567899999999999999997     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=8.1e-35  Score=270.40  Aligned_cols=222  Identities=17%  Similarity=0.213  Sum_probs=167.0

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|++.  ++.||+|......   ....+.+..|..++..+ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            35899999999999985  6789999875432   22345677788888764 999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++..........+..+                 |++|+|+|||++.+    ..+||+|||+++....    ....
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~  152 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD----GHIKIADFGMCKENML----GDAK  152 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC----CCEEEccCCcceECCC----CCCc
Confidence            999999987655544333322                 34567999999876    5699999999875311    1112


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....        ......    +..          
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~----i~~----------  210 (316)
T cd05619         153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--------EELFQS----IRM----------  210 (316)
T ss_pred             eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--------HHHHHH----HHh----------
Confidence            3456799999999999988899999999999999999999999963211        011111    100          


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-HHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-QVT  351 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl  351 (381)
                        ....++..++.++.+++.+||+.||.+||++. +++
T Consensus       211 --~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         211 --DNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             --CCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence              01122334567899999999999999999997 553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=3.3e-34  Score=280.13  Aligned_cols=186  Identities=15%  Similarity=0.157  Sum_probs=138.8

Q ss_pred             HHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCC------CCcceEEEEEE
Q 016850           87 EICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHH------SSLIKLLGACV  157 (381)
Q Consensus        87 ~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~l~~~~~  157 (381)
                      ++...++.| ..+.||+|+||+||+|.+.  ++.||||+++... .....+..|++++.+++|      .+|+++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            333344555 4567899999999999884  6789999875322 223456678888877754      45899999887


Q ss_pred             eC-CeeeEEEeccCCCCHHHHhcCCCCCCccc------------------hHHHHHHhhhcceeecccCC----------
Q 016850          158 SG-NCGYLVYEHVSGANLADCLRNPRNPSFTV------------------LSTWLSRMQSSSIIVSEENA----------  208 (381)
Q Consensus       158 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~------------------~~~~~~~l~~~Nill~~~~~----------  208 (381)
                      .. +++|||||++ +++|.+++.....+....                  ...+|+||||+|||++..+.          
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence            64 5789999999 789999987765444222                  12455677899999976531          


Q ss_pred             --CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcccccc
Q 016850          209 --GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFV  281 (381)
Q Consensus       209 --~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~  281 (381)
                        ....+||+|||++....       ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||...
T Consensus       281 ~~~~~~vkl~DfG~~~~~~-------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDER-------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             CCCCceEEECCCCccccCc-------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence              12359999999875421       1234568999999999999999999999999999999999999999643

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.7e-35  Score=289.87  Aligned_cols=229  Identities=15%  Similarity=0.225  Sum_probs=170.3

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC--------eee
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGN--------CGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--------~~~  163 (381)
                      ..+.||+|+||+||+|+.  .++.||+|++.....  .....+.+|+.+|..++|+||+++++.+...+        .++
T Consensus        36 i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~  115 (496)
T PTZ00283         36 ISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIA  115 (496)
T ss_pred             EEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEE
Confidence            456799999999999987  488999998755432  24567889999999999999999998775432        368


Q ss_pred             EEEeccCCCCHHHHhcCCC----CCCccc-------hHH----------HHHHhhhcceeecccCCCccceEEccccccc
Q 016850          164 LVYEHVSGANLADCLRNPR----NPSFTV-------LST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~----~~~~~~-------~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      +||||+++|+|.++|....    ......       ++.          +|++|+|+|||++.+    +.+||+|||+++
T Consensus       116 lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~----~~vkL~DFGls~  191 (496)
T PTZ00283        116 LVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSN----GLVKLGDFGFSK  191 (496)
T ss_pred             EEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCC----CCEEEEecccCe
Confidence            9999999999999997532    222222       111          234677999999876    569999999998


Q ss_pred             ccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       223 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      .+....  .........||+.|+|||++.+..++.++|||||||++|||++|+.||....           ..+......
T Consensus       192 ~~~~~~--~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----------~~~~~~~~~  258 (496)
T PTZ00283        192 MYAATV--SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----------MEEVMHKTL  258 (496)
T ss_pred             eccccc--cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----------HHHHHHHHh
Confidence            753211  1122345679999999999999899999999999999999999999996321           111111111


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      .+            .....+..+++.+.+|+.+||+.||.+||++.++++.
T Consensus       259 ~~------------~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        259 AG------------RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             cC------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            10            1112344567889999999999999999999999864

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-34  Score=260.91  Aligned_cols=225  Identities=23%  Similarity=0.326  Sum_probs=175.2

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      .+.||.|+||.||+|...++.|++|....... ..+++.+|+.++++++|+||+++++++.+.+..++||||+++++|.+
T Consensus        11 ~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   89 (256)
T cd05039          11 GATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVD   89 (256)
T ss_pred             eeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHH
Confidence            56789999999999999999999999765443 56789999999999999999999999999999999999999999999


Q ss_pred             HhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          177 CLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       177 ~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      ++....  ...+..+..                 .|.+|+|.||+++++    +.+||+|||+++....       ....
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~----~~~~l~d~g~~~~~~~-------~~~~  158 (256)
T cd05039          90 YLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSED----LVAKVSDFGLAKEASQ-------GQDS  158 (256)
T ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCC----CCEEEccccccccccc-------cccc
Confidence            997654  333333222                 345677999999876    5699999999976421       1112


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||++..+.++.++||||||+++||+++ |..||.....        ..+.    ..           +...
T Consensus       159 ~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~----~~-----------~~~~  215 (256)
T cd05039         159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVV----PH-----------VEKG  215 (256)
T ss_pred             CCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HHHH----HH-----------HhcC
Confidence            345678999999988889999999999999999997 9999853211        0111    11           1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      .....+..+++.+.+++.+||..+|++||++.++++.|+.
T Consensus       216 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         216 YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            1122233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-35  Score=282.34  Aligned_cols=244  Identities=16%  Similarity=0.165  Sum_probs=172.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||++...  ++.||+|++....   ....+.+.+|++++++++|||||++++++.+.+.+||||||++
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~   84 (377)
T cd05629           5 TVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLP   84 (377)
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCC
Confidence            3577999999999999884  7889999865432   1234668889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC---
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---  230 (381)
                      +|+|.+++..........+..                 +|+||+|+|||++.+    +.+||+|||+++.+......   
T Consensus        85 gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~----~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          85 GGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRG----GHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC----CCEEEeecccccccccccccccc
Confidence            999999998766555433322                 234677999999876    56999999999643110000   


Q ss_pred             ------cc----------------------------------ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHH
Q 016850          231 ------ES----------------------------------GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE  270 (381)
Q Consensus       231 ------~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~e  270 (381)
                            ..                                  ......+||+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                  00                                  00013579999999999998899999999999999999


Q ss_pred             HHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC---Ch
Q 016850          271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP---DM  347 (381)
Q Consensus       271 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~  347 (381)
                      |++|++||.....           .+........         ...+.......++.++.+|+.+||. +|.+|+   ++
T Consensus       241 lltG~~Pf~~~~~-----------~~~~~~i~~~---------~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~  299 (377)
T cd05629         241 CLIGWPPFCSENS-----------HETYRKIINW---------RETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGA  299 (377)
T ss_pred             hhcCCCCCCCCCH-----------HHHHHHHHcc---------CCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence            9999999963221           0111111100         0001101112356789999999997 777765   76


Q ss_pred             HHHHHHHHHHHHHhhhhhhh
Q 016850          348 RQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       348 ~evl~~L~~~~~~~~~~~~~  367 (381)
                      .+++   .+-+....+|+..
T Consensus       300 ~~~l---~hp~~~~~~~~~~  316 (377)
T cd05629         300 HEIK---SHPFFRGVDWDTI  316 (377)
T ss_pred             HHHh---cCCCcCCCCHHHH
Confidence            6664   4444444555544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.3e-34  Score=264.36  Aligned_cols=230  Identities=14%  Similarity=0.212  Sum_probs=170.6

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||++...       +..+++|..........+.+.+|+++++.++|+||+++++++.+.+..++||||+
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   89 (280)
T cd05092          10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM   89 (280)
T ss_pred             ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence            567999999999999742       4567777755444445678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCC---------------CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcc
Q 016850          170 SGANLADCLRNPRN---------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       170 ~~gsL~~~l~~~~~---------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      ++|+|.+++.....               ..+..+..                 +|++|+|+||+++++    ..+||+|
T Consensus        90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~----~~~kL~d  165 (280)
T cd05092          90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG----LVVKIGD  165 (280)
T ss_pred             CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC----CCEEECC
Confidence            99999999976431               22222221                 234677999999876    5699999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      ||+++.....  ..........+++.|+|||++.+..++.++|||||||++|||++ |.+||......        ... 
T Consensus       166 fg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~-  234 (280)
T cd05092         166 FGMSRDIYST--DYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--------EAI-  234 (280)
T ss_pred             CCceeEcCCC--ceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--------HHH-
Confidence            9999764221  11111223345788999999988889999999999999999998 89998532110        011 


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                        ....            .......+..+++.+.+|+.+||+.||.+||++.+|++.|+
T Consensus       235 --~~~~------------~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         235 --ECIT------------QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             --HHHH------------cCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence              1111            11111223345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=7.6e-35  Score=264.59  Aligned_cols=232  Identities=16%  Similarity=0.228  Sum_probs=167.4

Q ss_pred             ccccccCCCceEEEEEECCc----eEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeE
Q 016850           97 AKKFTSSSASASWRGTIRGK----DVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~----~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~l  164 (381)
                      ++.||+|+||.||+|.+...    .+|+|......  ....+.+.+|+++++.++|+||+++++++...      ...++
T Consensus         4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~   83 (272)
T cd05075           4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV   83 (272)
T ss_pred             ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence            56799999999999998532    57887765432  22457788999999999999999999987532      24689


Q ss_pred             EEeccCCCCHHHHhcCCC------CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccc
Q 016850          165 VYEHVSGANLADCLRNPR------NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTA  221 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~------~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a  221 (381)
                      ||||+++|+|.+++....      ..+...+.                 .+|++|+|+||+++++    ..+||+|||++
T Consensus        84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~  159 (272)
T cd05075          84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN----MNVCVADFGLS  159 (272)
T ss_pred             EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC----CCEEECCCCcc
Confidence            999999999999874321      12222221                 2345677999999876    56999999999


Q ss_pred             cccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHH
Q 016850          222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      +......  .........+++.|+|||.+.+..++.++|||||||++|||++ |+.||......        ...    .
T Consensus       160 ~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~----~  225 (272)
T cd05075         160 KKIYNGD--YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--------EIY----D  225 (272)
T ss_pred             cccCccc--ceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHH----H
Confidence            8653211  1111123346778999999988889999999999999999999 78888632110        111    1


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      .+..           ......+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       226 ~~~~-----------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         226 YLRQ-----------GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHc-----------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            1111           011112334566799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.9e-35  Score=281.92  Aligned_cols=231  Identities=13%  Similarity=0.167  Sum_probs=167.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.+|+|++.....   .....+.+|++++++++|||||++++.+.+.+.+|+|||||+
T Consensus         5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~   84 (382)
T cd05625           5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP   84 (382)
T ss_pred             EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence            3567999999999999984  67889998754322   234578899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC----
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG----  229 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~----  229 (381)
                      +|+|.+++..........+..                 +|++|||+|||++.+    +.+||+|||++..+.....    
T Consensus        85 gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~----g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          85 GGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD----GHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CCEEEeECCCCcccccccccccc
Confidence            999999998765555433332                 234677999999876    5699999999754311000    


Q ss_pred             ---------------------------------------CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHH
Q 016850          230 ---------------------------------------NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE  270 (381)
Q Consensus       230 ---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~e  270 (381)
                                                             .........+||+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  240 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence                                                   00001123579999999999998899999999999999999


Q ss_pred             HHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC---h
Q 016850          271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD---M  347 (381)
Q Consensus       271 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~  347 (381)
                      |++|++||.....           .+.......         ............+++++.+++.+|+ .||.+|++   +
T Consensus       241 lltG~~Pf~~~~~-----------~~~~~~i~~---------~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~  299 (382)
T cd05625         241 MLVGQPPFLAQTP-----------LETQMKVIN---------WQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA  299 (382)
T ss_pred             HHhCCCCCCCCCH-----------HHHHHHHHc---------cCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence            9999999964221           011111110         0011111112345678899998876 59999998   5


Q ss_pred             HHHH
Q 016850          348 RQVT  351 (381)
Q Consensus       348 ~evl  351 (381)
                      .+++
T Consensus       300 ~ei~  303 (382)
T cd05625         300 DEIK  303 (382)
T ss_pred             HHHh
Confidence            5554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-34  Score=275.31  Aligned_cols=242  Identities=15%  Similarity=0.138  Sum_probs=167.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|...  ++.||+|+..      ...+.+|+++|++|+|||||++++++......++|||++ .++
T Consensus        96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~-~~~  168 (391)
T PHA03212         96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY-KTD  168 (391)
T ss_pred             EEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC-CCC
Confidence            4577999999999999985  6788888632      245789999999999999999999999999999999999 589


Q ss_pred             HHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |..++......+...++                 .+|++|||+|||++..    +.+||+|||+++....   .......
T Consensus       169 L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~----~~vkL~DFG~a~~~~~---~~~~~~~  241 (391)
T PHA03212        169 LYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHP----GDVCLGDFGAACFPVD---INANKYY  241 (391)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCC----CCEEEEeCCccccccc---ccccccc
Confidence            99998776555543332                 2345677999999876    5599999999975321   1112234


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC--------Cccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG--------GVGG  308 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  308 (381)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||............ .............        ....
T Consensus       242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~-~~~l~~i~~~~g~~p~~~~~~~~~~  320 (391)
T PHA03212        242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDS-DRQIKLIIRRSGTHPNEFPIDAQAN  320 (391)
T ss_pred             cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCch-hHHHHHHHHHhcCChhhcCcchhHH
Confidence            567999999999999889999999999999999999999877432211100000 0000000000000        0000


Q ss_pred             hhhhh----c-----ccccCCC--CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VRKWV----D-----RRLKDSY--PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~~~~----~-----~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +...+    .     +...+..  ....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00000    0     0000000  1134668999999999999999999999975

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=1.3e-34  Score=267.44  Aligned_cols=241  Identities=25%  Similarity=0.315  Sum_probs=175.4

Q ss_pred             ccccccCCCceEEEEEEC--CceE--EEEEecccc-cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDV--IIFQRKLRR-SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v--~vk~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.  +..+  ++|...... ......+.+|++++.++ +||||+++++++..++.+++||||++
T Consensus        12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   91 (303)
T cd05088          12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   91 (303)
T ss_pred             eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence            467999999999999974  4443  555433222 22456788999999999 89999999999999999999999999


Q ss_pred             CCCHHHHhcCCCC----------------CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcc
Q 016850          171 GANLADCLRNPRN----------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       171 ~gsL~~~l~~~~~----------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      +|+|.+++.....                .....+.                 ..|++|+|+|||++++    ..+||+|
T Consensus        92 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~----~~~kl~d  167 (303)
T cd05088          92 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN----YVAKIAD  167 (303)
T ss_pred             CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC----CcEEeCc
Confidence            9999999975431                1221111                 2234677999999876    5599999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      ||+++....     ........++..|+|||++.+..++.++|||||||++|||+| |..||......        ....
T Consensus       168 fg~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~  234 (303)
T cd05088         168 FGLSRGQEV-----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYE  234 (303)
T ss_pred             cccCcccch-----hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--------HHHH
Confidence            999864211     011112234678999999988888999999999999999998 99998532110        1111


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcC
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                      .               +........+..+++.+.+|+.+||+.+|++||++.++++.|+.++.+.+.+-...-
T Consensus       235 ~---------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~~~~  292 (303)
T cd05088         235 K---------------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTL  292 (303)
T ss_pred             H---------------HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhhhhh
Confidence            0               111111122334567899999999999999999999999999999888877665443

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1e-34  Score=270.35  Aligned_cols=234  Identities=17%  Similarity=0.195  Sum_probs=173.5

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|+..  ++.||+|++....   ....+.+..|.+++..+ +||||+++++++.+.+.+|+||||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            5899999999999986  5789999875432   22345677899999876 8999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|..++.......+..+..                 .|++|+|+||+++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~----~~~kL~Dfg~~~~~~~----~~~~~  153 (321)
T cd05591          82 DLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE----GHCKLADFGMCKEGIL----NGVTT  153 (321)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC----CCEEEeecccceeccc----CCccc
Confidence            9999998766555443322                 234677999999886    5699999999875321    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......           ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----------~~~~~~i~-----------~~  211 (321)
T cd05591         154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----------DDLFESIL-----------HD  211 (321)
T ss_pred             cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----------HHHHHHHH-----------cC
Confidence            456799999999999988999999999999999999999999964321           11111111           11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCC-------ChHHHHHHHHHHHHHhhhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-------DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~L~~~~~~~~~~~~~  367 (381)
                      .  ...+..++.++.+++.+||+.||++||       ++.++++   .-+.+..+|...
T Consensus       212 ~--~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~---hp~~~~~~~~~~  265 (321)
T cd05591         212 D--VLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ---HPFFKEIDWVLL  265 (321)
T ss_pred             C--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc---CCccCCCCHHHH
Confidence            1  112334567899999999999999999       5666643   334444455543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=4.5e-35  Score=273.08  Aligned_cols=237  Identities=16%  Similarity=0.179  Sum_probs=171.7

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHH-HHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLS-VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||+||+|++.  ++.||+|++.....   .....+.+|.. +++.++|||||++++++.+.+..|+||||+++|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g   81 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence            5899999999999984  78899998754321   12344555655 467799999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|..++.......+..+..                 +|++|+|+|||++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~----~~~kl~Dfg~~~~~~~----~~~~~  153 (323)
T cd05575          82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ----GHVVLTDFGLCKEGIE----HSKTT  153 (323)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC----CcEEEeccCCCccccc----CCCcc
Confidence            9999998766555443332                 233567999999876    5699999999875311    12223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......           ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----------~~~~~~i~-----------~~  211 (323)
T cd05575         154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----------AEMYDNIL-----------NK  211 (323)
T ss_pred             ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----------HHHHHHHH-----------cC
Confidence            456799999999999988999999999999999999999999963211           11111111           11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH-HHHHHHHHHHHhhhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ-VTGLVSKMYLESKNWADK  367 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-vl~~L~~~~~~~~~~~~~  367 (381)
                      .  ...+...+..+.+++.+||+.||.+||++.+ +.+.++.-+....+|...
T Consensus       212 ~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~  262 (323)
T cd05575         212 P--LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDL  262 (323)
T ss_pred             C--CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence            1  1122345678999999999999999999853 334444444444445443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.5e-35  Score=279.59  Aligned_cols=229  Identities=15%  Similarity=0.167  Sum_probs=168.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+.....   ....+.+.+|+.+++.++||||+++++++.+++.+|+|||||+
T Consensus        47 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~  126 (370)
T cd05596          47 VIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMP  126 (370)
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCC
Confidence            3567899999999999985  7789999864321   2234567889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.... .+...+.                 .+|++|+|+|||++.+    +.+||+|||++.....   ....
T Consensus       127 gg~L~~~l~~~~-l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~----~~~kL~DfG~~~~~~~---~~~~  198 (370)
T cd05596         127 GGDLVNLMSNYD-IPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS----GHLKLADFGTCMKMDA---NGMV  198 (370)
T ss_pred             CCcHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCC----CCEEEEeccceeeccC---CCcc
Confidence            999999997643 2322221                 2234677999999876    5699999999976432   1111


Q ss_pred             cccccCCCccccchhhhcCC----CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          234 KVNKIEGTRGYMAPEFQASG----VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~----~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .....+||+.|+|||++.+.    .++.++|||||||++|||++|+.||.....           ...........    
T Consensus       199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----------~~~~~~i~~~~----  263 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----------VGTYSKIMDHK----  263 (370)
T ss_pred             cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----------HHHHHHHHcCC----
Confidence            22456799999999988643    478999999999999999999999964211           11111111100    


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~  352 (381)
                           ..+.......++..+.+||.+||+.+|++  |+++.++++
T Consensus       264 -----~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         264 -----NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             -----CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence                 00111111235788999999999999988  999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=5.5e-35  Score=272.58  Aligned_cols=218  Identities=17%  Similarity=0.191  Sum_probs=162.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHH---hhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVI---CRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il---~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|.+.  ++.||+|+.....   ....+.+.+|+.++   +.++||||+++++++.+.+.+|+||||
T Consensus         4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~   83 (324)
T cd05589           4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY   83 (324)
T ss_pred             EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence            467999999999999985  7889999875432   12345677777665   566899999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +++|+|..++... .+.+..+..                 +|++|+|+||+++.+    +.+||+|||+++....    .
T Consensus        84 ~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~----~~~kL~Dfg~~~~~~~----~  154 (324)
T cd05589          84 AAGGDLMMHIHTD-VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTE----GFVKIADFGLCKEGMG----F  154 (324)
T ss_pred             CCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCC----CcEEeCcccCCccCCC----C
Confidence            9999999988754 333333222                 234667999999887    5699999999865321    1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........|++.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......         
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----------~~~~~~i~---------  214 (324)
T cd05589         155 GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----------EEVFDSIV---------  214 (324)
T ss_pred             CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHH---------
Confidence            2223456799999999999988999999999999999999999999963221           01111111         


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM  347 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~  347 (381)
                        ..  ...++..+++.+.+++.+||+.||.+||++
T Consensus       215 --~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         215 --ND--EVRYPRFLSREAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             --hC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence              00  112334557789999999999999999953

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-36  Score=266.73  Aligned_cols=235  Identities=17%  Similarity=0.206  Sum_probs=167.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--C---eeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG--N---CGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~---~~~lv~e~~  169 (381)
                      .+.+|.|+||.||+|...  ++.||||+......    .-.+|+++|++++|||||+|.-+|...  .   .+.+|||||
T Consensus        29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym  104 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM  104 (364)
T ss_pred             eEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence            356899999999999985  68999998754433    335699999999999999999988732  2   457899999


Q ss_pred             CCCCHHHHhcC----CCCCCcc-----------------chHHHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          170 SGANLADCLRN----PRNPSFT-----------------VLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       170 ~~gsL~~~l~~----~~~~~~~-----------------~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      | -+|.++++.    +...+.-                 .....|+||||.|+|+|.+.   +.+||||||.|+.+....
T Consensus       105 P-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t---g~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  105 P-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT---GVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             h-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC---CeEEeccCCcceeeccCC
Confidence            7 699999984    2222211                 12234568889999999876   789999999999874321


Q ss_pred             CCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC---
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG---  304 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---  304 (381)
                           ......-|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|++....        ..+..+.+.+..   
T Consensus       181 -----pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~--------dQL~eIik~lG~Pt~  247 (364)
T KOG0658|consen  181 -----PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV--------DQLVEIIKVLGTPTR  247 (364)
T ss_pred             -----CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH--------HHHHHHHHHhCCCCH
Confidence                 22345568999999988874 6999999999999999999999999864321        111111111111   


Q ss_pred             -----CccchhhhhcccccCC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 -----GVGGVRKWVDRRLKDS-----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 -----~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           -.....+...+.+...     +....++++.+|+.++|+.+|.+|.++.|++.
T Consensus       248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             HHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                 0011111111122111     23456789999999999999999999998864

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2.8e-34  Score=265.20  Aligned_cols=234  Identities=22%  Similarity=0.301  Sum_probs=173.1

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|...       +..+|+|..+.... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus        39 ~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~  118 (302)
T cd05055          39 FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVIT  118 (302)
T ss_pred             EcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEE
Confidence            3567899999999999751       34678887654322 2346789999999999 7999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCC--CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          167 EHVSGANLADCLRNPRN--PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~--~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      ||+++|+|.+++.....  .++.++.                 ..|.+|+|+||+++++    ..++|+|||+++.+...
T Consensus       119 e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~~l~dfg~~~~~~~~  194 (302)
T cd05055         119 EYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHG----KIVKICDFGLARDIMND  194 (302)
T ss_pred             EcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCC----CeEEECCCcccccccCC
Confidence            99999999999975432  3333222                 2345677999999876    56999999999865321


Q ss_pred             CCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                      .  .........++..|+|||++.+..++.++|||||||++|||++ |..||......           ...        
T Consensus       195 ~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-----------~~~--------  253 (302)
T cd05055         195 S--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-----------SKF--------  253 (302)
T ss_pred             C--ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-----------HHH--------
Confidence            1  1111223446788999999988889999999999999999998 99998632210           001        


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                         ............+...++.+.+++.+||..+|++||++.++++.|+++
T Consensus       254 ---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         254 ---YKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             ---HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence               111111112222334567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2e-34  Score=262.72  Aligned_cols=234  Identities=20%  Similarity=0.274  Sum_probs=169.0

Q ss_pred             cccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.+       ..|++|........ ....+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   89 (277)
T cd05036          10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLE   89 (277)
T ss_pred             eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEe
Confidence            35678999999999999854       45666654332222 34568999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC-------CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          168 HVSGANLADCLRNPRN-------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~-------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      |+++|+|.+++.....       ..+..+..                 +|.+|+|+||++++.+. ...+||+|||+++.
T Consensus        90 ~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~-~~~~kl~dfg~~~~  168 (277)
T cd05036          90 LMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP-GRVAKIADFGMARD  168 (277)
T ss_pred             cCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC-CcceEeccCccccc
Confidence            9999999999976432       22222222                 23356799999976431 24589999999986


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHH
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      +...  ..........++..|+|||++.+..++.++|||||||++|||++ |..||......        ...    .. 
T Consensus       169 ~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~~----~~-  233 (277)
T cd05036         169 IYRA--SYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EVM----EF-  233 (277)
T ss_pred             cCCc--cceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHH----HH-
Confidence            5211  11111112334578999999988889999999999999999997 99998632210        011    11 


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                                +........+..++..+.+++.+||+.||++||++.+|++.|+
T Consensus       234 ----------~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         234 ----------VTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             ----------HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence                      1111122234455678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-34  Score=258.89  Aligned_cols=229  Identities=24%  Similarity=0.376  Sum_probs=176.6

Q ss_pred             cccccCCCceEEEEEEC-----CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|...     +..+++|........ ..+.+.+|+++++.++|+||+++++++.+....++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            35899999999999986     678888887554433 267899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCC---------CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          172 ANLADCLRNP---------RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       172 gsL~~~l~~~---------~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      |+|.+++...         ...++..+..+                 |.+|+|.||+++.+    ..+||+|||.+....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~----~~~~l~dfg~~~~~~  156 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGED----LVVKISDFGLSRDVY  156 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCC----CcEEEcccccccccc
Confidence            9999999875         44444433332                 33567999999987    569999999998754


Q ss_pred             cCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                      ....  ........+++.|+|||.+....++.++||||||+++|||++ |..||.....        ....+    .   
T Consensus       157 ~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~----~---  219 (262)
T cd00192         157 DDDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLE----Y---  219 (262)
T ss_pred             cccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHH----H---
Confidence            3111  122345667899999999988889999999999999999999 6999864311        01111    1   


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                              +........+..++..+.+++.+||+.||.+||++.++++.|+
T Consensus       220 --------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         220 --------LRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --------HHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                    1111122334456788999999999999999999999998773

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.9e-34  Score=264.99  Aligned_cols=233  Identities=23%  Similarity=0.320  Sum_probs=171.6

Q ss_pred             ccccccCCCceEEEEEECC-------ceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|.+.+       ..+++|....... .....+.+|++++.++ +|+||+++++++..++.+++|||
T Consensus        17 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e   96 (293)
T cd05053          17 GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVE   96 (293)
T ss_pred             eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEE
Confidence            4678999999999998742       4677777654322 2345688999999999 89999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC----------------CCCccchH-----------------HHHHHhhhcceeecccCCCccceE
Q 016850          168 HVSGANLADCLRNPR----------------NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAK  214 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~----------------~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~k  214 (381)
                      |+++|+|.+++....                ...+..+.                 ..|++|+|+||+++++    ..+|
T Consensus        97 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~----~~~k  172 (293)
T cd05053          97 YAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED----HVMK  172 (293)
T ss_pred             eCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC----CeEE
Confidence            999999999996532                11111111                 2334677999999876    5699


Q ss_pred             EcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchh
Q 016850          215 ICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVS  293 (381)
Q Consensus       215 l~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~  293 (381)
                      |+|||+++.+...  ..........++..|+|||++.+..++.++|||||||++|||++ |..||.....          
T Consensus       173 L~Dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----------  240 (293)
T cd05053         173 IADFGLARDIHHI--DYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----------  240 (293)
T ss_pred             eCccccccccccc--cceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH----------
Confidence            9999999865321  11111222345678999999988889999999999999999997 8888853211          


Q ss_pred             HHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          294 VVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                       .+ .           ............+..++..+.+|+.+||..||++|||+.++++.|+++.
T Consensus       241 -~~-~-----------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         241 -EE-L-----------FKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             -HH-H-----------HHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence             00 0           1111111122234455678999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-34  Score=258.63  Aligned_cols=227  Identities=20%  Similarity=0.307  Sum_probs=168.8

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.++ ++.+++|+... .......+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus         9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (256)
T cd05059           9 LKELGSGQFGVVHLGKWRGKIDVAIKMIRE-GAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL   87 (256)
T ss_pred             hhhhccCCCceEEEeEecCCccEEEEEecc-CCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence            567999999999999986 45778887542 2334567889999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ...+..+..                 .|++|+|+||+++++    +.+||+|||+++....   ........
T Consensus        88 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~----~~~kl~dfg~~~~~~~---~~~~~~~~  160 (256)
T cd05059          88 NYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGED----NVVKVSDFGLARYVLD---DQYTSSQG  160 (256)
T ss_pred             HHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCC----CcEEECCcccceeccc---ccccccCC
Confidence            9997543 233322222                 234667999999876    5699999999876421   11111122


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||.+.+..++.++||||||+++||+++ |+.||......        ....   .            +...
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~---~------------~~~~  217 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--------EVVE---S------------VSAG  217 (256)
T ss_pred             CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--------HHHH---H------------HHcC
Confidence            234568999999998899999999999999999999 89998632110        1111   0            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      .....+..++..+.+++.+||..+|++||++.++++.|
T Consensus       218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         218 YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            11222334577899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.4e-35  Score=250.47  Aligned_cols=227  Identities=19%  Similarity=0.260  Sum_probs=175.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc----c----HHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL----D----LEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~----~----~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      .+.||.|..++|-++.++  ++++++|++......    .    .+.-.+|+.||+++ .||||+++.++|+.+..+++|
T Consensus        22 keilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlV  101 (411)
T KOG0599|consen   22 KEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLV  101 (411)
T ss_pred             HHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhh
Confidence            456799999999998885  788999887543221    1    34556799999998 799999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      +|.|+.|.|+|+|...-..+++..                 .+.|+||||+|||++++    .++||+|||+++.+.   
T Consensus       102 Fdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn----~~i~isDFGFa~~l~---  174 (411)
T KOG0599|consen  102 FDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDN----MNIKISDFGFACQLE---  174 (411)
T ss_pred             hhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccc----cceEEeccceeeccC---
Confidence            999999999999987544443322                 24566888999999997    679999999998863   


Q ss_pred             CCccccccccCCCccccchhhhc------CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQA------SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                        ........||||+|+|||.+.      ...|+..+|+|++|||+|-|+.|.+||..-.          .+.  ....+
T Consensus       175 --~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk----------Qml--MLR~I  240 (411)
T KOG0599|consen  175 --PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK----------QML--MLRMI  240 (411)
T ss_pred             --CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH----------HHH--HHHHH
Confidence              233556789999999999875      3468999999999999999999999996211          111  11111


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+.        -.+..+...+++...++||.+||+.||.+|.|++|+|.
T Consensus       241 meGk--------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  241 MEGK--------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             Hhcc--------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            1110        01222335678889999999999999999999999975

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.2e-34  Score=260.45  Aligned_cols=232  Identities=18%  Similarity=0.269  Sum_probs=170.3

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe------ee
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNC------GY  163 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~------~~  163 (381)
                      .+.||+|+||.||+|.+.     +..||+|+.......  ..+.+.+|+++++.++||||+++++++.....      .+
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   83 (273)
T cd05035           4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM   83 (273)
T ss_pred             ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence            567899999999999874     256899987643322  35678999999999999999999998876544      79


Q ss_pred             EEEeccCCCCHHHHhcCCC------CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccc
Q 016850          164 LVYEHVSGANLADCLRNPR------NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~------~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      +||||+++|+|..++....      ..++..+.                 .+|++|+|+||+++++    ..+||+|||+
T Consensus        84 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~dfg~  159 (273)
T cd05035          84 VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED----MTVCVADFGL  159 (273)
T ss_pred             EEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC----CeEEECCccc
Confidence            9999999999999985432      22222221                 2334677999999876    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++......  .........++..|+|||++.+..++.++|||||||++|||++ |..||.....        ....+   
T Consensus       160 ~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--------~~~~~---  226 (273)
T cd05035         160 SKKIYSGD--YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--------HEIYD---  226 (273)
T ss_pred             eeeccccc--cccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--------HHHHH---
Confidence            98653211  1111122345678999999988889999999999999999999 8888853221        01111   


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                       .           +........+..++..+.+++.+||+.||.+||++.|+++.|+++
T Consensus       227 -~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         227 -Y-----------LRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             -H-----------HHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             1           111111223445677899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.2e-34  Score=259.34  Aligned_cols=225  Identities=22%  Similarity=0.283  Sum_probs=170.8

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEE-eCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|...++.+++|....  ....+.+.+|+.++++++|+||+++++++. .++..++||||+++|+|.
T Consensus        11 ~~~lg~g~~~~v~~~~~~~~~~~~k~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~   88 (256)
T cd05082          11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV   88 (256)
T ss_pred             eeeecccCCCeEEEEEEcCCcEEEEEeCC--CchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHH
Confidence            56799999999999999999999998643  334567999999999999999999999764 556789999999999999


Q ss_pred             HHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++.....  ..+..+..                 .|++|+|+||+++++    ..+||+|||+++....       ...
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~----~~~kl~dfg~~~~~~~-------~~~  157 (256)
T cd05082          89 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSED----NVAKVSDFGLTKEASS-------TQD  157 (256)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCC----CcEEecCCccceeccc-------cCC
Confidence            99976543  23232222                 233566999999876    5599999999875421       112


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||++.+..++.++|||||||++|||++ |+.||....           ..+..            ..+..
T Consensus       158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-----------~~~~~------------~~~~~  214 (256)
T cd05082         158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----------LKDVV------------PRVEK  214 (256)
T ss_pred             CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-----------HHHHH------------HHHhc
Confidence            2345678999999988889999999999999999997 999885321           11111            11111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      ......+..+++.+.+++.+||+.||++|||+.++++.|+++
T Consensus       215 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         215 GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            112223345667899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=5.2e-34  Score=258.41  Aligned_cols=234  Identities=17%  Similarity=0.242  Sum_probs=174.3

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+.  .++.|++|+......   .....+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus         6 i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   85 (267)
T cd08228           6 IEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELAD   85 (267)
T ss_pred             eeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecC
Confidence            356799999999999998  478999997654322   234568899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC----CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          171 GANLADCLRNP----RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       171 ~gsL~~~l~~~----~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|+|.+++...    ...+...+..+                 |.+|+|.||+++.+    ..++|+|||++.....   
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~----~~~~l~d~g~~~~~~~---  158 (267)
T cd08228          86 AGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITAT----GVVKLGDLGLGRFFSS---  158 (267)
T ss_pred             CCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCC----CCEEECccccceeccc---
Confidence            99999988532    22333322222                 23566999999876    5599999999876532   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                       .........|++.|+|||.+.+..++.++||||||+++|||++|+.||.....         ...... ..+.      
T Consensus       159 -~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---------~~~~~~-~~~~------  221 (267)
T cd08228         159 -KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---------NLFSLC-QKIE------  221 (267)
T ss_pred             -hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---------cHHHHH-HHHh------
Confidence             11122345689999999999888899999999999999999999999853211         011111 0000      


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                          .....+.....++..+.+++.+||+.+|.+||++.++++.|+.+
T Consensus       222 ----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         222 ----QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             ----cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence                00111112234567899999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.6e-34  Score=260.93  Aligned_cols=228  Identities=23%  Similarity=0.363  Sum_probs=168.4

Q ss_pred             ccccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      ...||+|+||.||+|.+.+ ..+++|..... ....+.+.+|++++++++|+||+++++++. .+..++||||+++|+|.
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~   88 (260)
T cd05069          11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLL   88 (260)
T ss_pred             eeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHH
Confidence            4679999999999999864 46777765432 234577899999999999999999999875 45678999999999999


Q ss_pred             HHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++.....  ..+..+..                 .|++|+|.||+++++    ..++|+|||+++.....   ......
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~----~~~~l~dfg~~~~~~~~---~~~~~~  161 (260)
T cd05069          89 DFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN----LVCKIADFGLARLIEDN---EYTARQ  161 (260)
T ss_pred             HHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC----CeEEECCCccceEccCC---cccccC
Confidence            99976432  22222211                 234567899999876    56999999999765321   111122


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||.+.+..++.++|||||||++|||++ |+.||......        ....+    +           ..
T Consensus       162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~----~-----------~~  218 (260)
T cd05069         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--------EVLEQ----V-----------ER  218 (260)
T ss_pred             CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH----H-----------Hc
Confidence            3346788999999988889999999999999999999 89998632210        11111    1           11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ......+...+..+.+++.+||..||.+||++.+|++.|++
T Consensus       219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         219 GYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            11122334566789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.1e-34  Score=265.07  Aligned_cols=236  Identities=22%  Similarity=0.320  Sum_probs=173.5

Q ss_pred             cccccccCCCceEEEEEEC---------CceEEEEEecccc-cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR---------GKDVIIFQRKLRR-SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|++.         +..|++|...... ......+.+|+.+++.+ +||||+++++++...+..++
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   98 (304)
T cd05101          19 LGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV   98 (304)
T ss_pred             ecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEE
Confidence            4578999999999999752         2357787764332 22456789999999999 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCCC----------------Ccc-------chHH----------HHHHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRNP----------------SFT-------VLST----------WLSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~~----------------~~~-------~~~~----------~~~~l~~~Nill~~~~~~~~  211 (381)
                      ||||+++|+|.++|......                ++.       ++..          .|++|+|+||+++++    .
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~----~  174 (304)
T cd05101          99 IVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTEN----N  174 (304)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCC----C
Confidence            99999999999999764321                111       1222          234667888888876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++.+....  .........+++.|+|||++.+..++.++||||||+++|||++ |..||....        
T Consensus       175 ~~kl~D~g~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--------  244 (304)
T cd05101         175 VMKIADFGLARDVNNID--YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--------  244 (304)
T ss_pred             cEEECCCccceeccccc--ccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--------
Confidence            69999999998653211  1112233456788999999988889999999999999999998 778875321        


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                         ..+.... +           ........+..++..+.+|+.+||+.+|.+||++.++++.|++++.-
T Consensus       245 ---~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         245 ---VEELFKL-L-----------KEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             ---HHHHHHH-H-----------HcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence               1111111 1           11111122335667899999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.4e-35  Score=277.20  Aligned_cols=243  Identities=16%  Similarity=0.157  Sum_probs=175.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|...  ++.||+|+......   ...+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   84 (330)
T cd05601           5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQP   84 (330)
T ss_pred             EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCC
Confidence            3567899999999999984  78899998765332   235668899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC-CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++... ....+..+..                 +|++|+|+||+++..    +.+||+|||++..+..   ...
T Consensus        85 ~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~----~~~kL~Dfg~a~~~~~---~~~  157 (330)
T cd05601          85 GGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT----GHIKLADFGSAARLTA---NKM  157 (330)
T ss_pred             CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCC----CCEEeccCCCCeECCC---CCc
Confidence            99999999875 3444333322                 234677999999876    5699999999986532   111


Q ss_pred             ccccccCCCccccchhhhc------CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          233 GKVNKIEGTRGYMAPEFQA------SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~------~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                      .......||+.|+|||++.      ...++.++|||||||++|||++|+.||.....           ..........  
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----------~~~~~~i~~~--  224 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----------AKTYNNIMNF--  224 (330)
T ss_pred             eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----------HHHHHHHHcC--
Confidence            1223457999999999886      45678999999999999999999999963211           1111111100  


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcC
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                             ...........++..+.+|+.+||+ ||++||++.+++   .+-+.+..+|.....
T Consensus       225 -------~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~---~h~~~~~~~~~~~~~  276 (330)
T cd05601         225 -------QRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLC---CHPFFSKIDWNNIRN  276 (330)
T ss_pred             -------CCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHh---CCCCcCCCCHHHHhh
Confidence                   0001111122456789999999998 999999999885   333444445555443

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.1e-34  Score=269.95  Aligned_cols=236  Identities=21%  Similarity=0.324  Sum_probs=171.4

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEe-CCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVS-GNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~-~~~~~lv~  166 (381)
                      .+.||+|+||.||+|...       ++.||+|++...... ..+.+.+|++++.++ +|+||++++++|.. +..++++|
T Consensus        12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~   91 (337)
T cd05054          12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV   91 (337)
T ss_pred             hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence            577999999999999753       357899886543222 345678899999999 89999999998875 45688999


Q ss_pred             eccCCCCHHHHhcCCCC-------------------------------------------------------------CC
Q 016850          167 EHVSGANLADCLRNPRN-------------------------------------------------------------PS  185 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~-------------------------------------------------------------~~  185 (381)
                      ||+++|+|.++|.....                                                             ..
T Consensus        92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  171 (337)
T cd05054          92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT  171 (337)
T ss_pred             ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence            99999999999864221                                                             11


Q ss_pred             cc-------chHH----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchh
Q 016850          186 FT-------VLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE  248 (381)
Q Consensus       186 ~~-------~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE  248 (381)
                      +.       +++.          .|++|+|.||+++++    ..+||+|||+++.+...  ..........++..|+|||
T Consensus       172 ~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~----~~vkL~DfG~a~~~~~~--~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         172 LEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN----NVVKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC----CcEEEeccccchhcccC--cchhhccCCCCCccccCcH
Confidence            11       1222          234667888888876    56999999999865321  1111222345678899999


Q ss_pred             hhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHH
Q 016850          249 FQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAE  327 (381)
Q Consensus       249 ~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (381)
                      ++.+..++.++|||||||++|||++ |..||......           +.....           +........+...++
T Consensus       246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-----------~~~~~~-----------~~~~~~~~~~~~~~~  303 (337)
T cd05054         246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-----------EEFCRR-----------LKEGTRMRAPEYATP  303 (337)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-----------HHHHHH-----------HhccCCCCCCccCCH
Confidence            9999999999999999999999998 99998642111           001111           111111222334567


Q ss_pred             HHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          328 KMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       328 ~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ++.+++.+||+.+|++||++.|+++.|++++.+
T Consensus       304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~  336 (337)
T cd05054         304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE  336 (337)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=9.3e-34  Score=263.44  Aligned_cols=182  Identities=17%  Similarity=0.204  Sum_probs=136.5

Q ss_pred             cccccccCCCceEEEEEEC----CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR----GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~  169 (381)
                      .+.+||+|+||.||+|+..    ++.+|+|.....  .....+.+|+++|++++|||||++++++..  +...|+||||+
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07868           5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA   82 (317)
T ss_pred             cccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence            4678999999999999864    467888876432  224567899999999999999999999864  56689999999


Q ss_pred             CCCCHHHHhcCCC---------CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          170 SGANLADCLRNPR---------NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       170 ~~gsL~~~l~~~~---------~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      . ++|.+++....         ..+...+.                 .+|+||+|+|||+...+..+..+||+|||+++.
T Consensus        83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            4 79988876422         12222221                 123467799999965444446799999999987


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCcccccc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFV  281 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~  281 (381)
                      +..... .........||+.|+|||++.+. .++.++|||||||++|||++|++||...
T Consensus       162 ~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         162 FNSPLK-PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCCCCc-cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            543211 11223456789999999998764 5899999999999999999999999744

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=2.6e-34  Score=260.42  Aligned_cols=231  Identities=17%  Similarity=0.236  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|+..  ++.|++|+...........+.+|+.++++++||||+++++++...+.+++||||+++|+
T Consensus        13 ~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~   92 (267)
T cd06646          13 LIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGS   92 (267)
T ss_pred             hhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCc
Confidence            4578999999999999974  67888988765544456678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++......+...+..+                 |.+|+|.||++++.    +.+||+|||++..+..    ......
T Consensus        93 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~----~~~~l~dfg~~~~~~~----~~~~~~  164 (267)
T cd06646          93 LQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDN----GDVKLADFGVAAKITA----TIAKRK  164 (267)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC----CCEEECcCccceeecc----cccccC
Confidence            9999976555444433322                 33566899999776    5599999999986532    111223


Q ss_pred             ccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          237 KIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ...|++.|+|||.+.   ...++.++|||||||++|||++|+.||.........       .    ...   ...   +.
T Consensus       165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-------~----~~~---~~~---~~  227 (267)
T cd06646         165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-------F----LMS---KSN---FQ  227 (267)
T ss_pred             ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-------e----eee---cCC---CC
Confidence            456899999999874   345788999999999999999999998532211000       0    000   000   00


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      .+..  .....++..+.+++.+||..||++||+++++++.
T Consensus       228 ~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         228 PPKL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             CCCC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            0000  1122356789999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.1e-34  Score=293.18  Aligned_cols=251  Identities=15%  Similarity=0.189  Sum_probs=182.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+.......   ..+++.+|++++++++|||||++++++.+++..++||||++
T Consensus         6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~e   85 (932)
T PRK13184          6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIE   85 (932)
T ss_pred             EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCC
Confidence            3577999999999999985  788999987543222   34678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC---C--------CCcc-------ch----------HHHHHHhhhcceeecccCCCccceEEccccccc
Q 016850          171 GANLADCLRNPR---N--------PSFT-------VL----------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       171 ~gsL~~~l~~~~---~--------~~~~-------~~----------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      +|+|.+++....   .        ....       ++          ..+|+||+|+||+++.+    +.+||+|||+++
T Consensus        86 GGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~d----g~vKLiDFGLAk  161 (932)
T PRK13184         86 GYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLF----GEVVILDWGAAI  161 (932)
T ss_pred             CCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCC----CCEEEEecCcce
Confidence            999999986421   0        1111       11          13455788999999887    559999999998


Q ss_pred             ccccCCCCc--------------cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc
Q 016850          223 LCGEVSGNE--------------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG  288 (381)
Q Consensus       223 ~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~  288 (381)
                      .........              .......+||+.|+|||++.+..++.++|||||||++|||++|+.||........  
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki--  239 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI--  239 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh--
Confidence            652111000              0111235799999999999998999999999999999999999999964221100  


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-ChHHHHHHHHHHHHHhhhhhhh
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~~~~~  367 (381)
                          ...    ...          ..+. .......+++.+.+++.+||+.||++|| ++.++++.|+.++.....|...
T Consensus       240 ----~~~----~~i----------~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~  300 (932)
T PRK13184        240 ----SYR----DVI----------LSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVK  300 (932)
T ss_pred             ----hhh----hhc----------cChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccc
Confidence                000    000          0000 0001124567789999999999999996 6788889999988777777665


Q ss_pred             cCCC
Q 016850          368 IGFP  371 (381)
Q Consensus       368 ~~~~  371 (381)
                      ..++
T Consensus       301 ~~l~  304 (932)
T PRK13184        301 ATLM  304 (932)
T ss_pred             cccc
Confidence            5444

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-35  Score=277.06  Aligned_cols=232  Identities=16%  Similarity=0.234  Sum_probs=173.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.||+|++.....   .....+.+|++++..++||||+++++++.+++.+|+||||++
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   84 (350)
T cd05573           5 VIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMP   84 (350)
T ss_pred             EEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCC
Confidence            3567999999999999986  88999998754321   245678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC----
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG----  229 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~----  229 (381)
                      +|+|.+++..........+..                 +|++|+|+||+++.+    +.+||+|||++..+.....    
T Consensus        85 ~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~----~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          85 GGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDAD----GHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC----CCEEeecCCCCccCcccCccccc
Confidence            999999998765555433322                 234677999999887    5699999999986533210    


Q ss_pred             ---------------------CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc
Q 016850          230 ---------------------NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG  288 (381)
Q Consensus       230 ---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~  288 (381)
                                           ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.....     
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-----  235 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL-----  235 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH-----
Confidence                                 001123456799999999999999999999999999999999999999964221     


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-hHHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-MRQVTG  352 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~  352 (381)
                            .........        +. ..........+++.+.+||.+||. ||.+||+ +.++++
T Consensus       236 ------~~~~~~i~~--------~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         236 ------QETYNKIIN--------WK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             ------HHHHHHHhc--------cC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence                  011111110        00 111111111257889999999997 9999999 999965

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.8e-35  Score=258.97  Aligned_cols=238  Identities=15%  Similarity=0.208  Sum_probs=175.0

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCC-cceEEEEEEeCC------eeeEEE
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSS-LIKLLGACVSGN------CGYLVY  166 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~------~~~lv~  166 (381)
                      ++||+|+||+||+|+..  |+.||+|+++.....  ......+|+.+|++|+|+| ||+|++++...+      .+++||
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf   96 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF   96 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence            56999999999999985  889999998877653  3566789999999999999 999999999877      789999


Q ss_pred             eccCCCCHHHHhcCCCC----CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          167 EHVSGANLADCLRNPRN----PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~----~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      ||++ -+|.+++.....    .+...+.                 .+|+||||+|||+++.    +.+||+|||+|+.+.
T Consensus        97 e~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~----G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen   97 EFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSS----GVLKLADFGLARAFS  171 (323)
T ss_pred             Eeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCC----CcEeeeccchHHHhc
Confidence            9994 799999987552    2222222                 3455788999999996    669999999999754


Q ss_pred             cCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc-
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA-  303 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-  303 (381)
                      .    .....+..++|.+|+|||++.+. .|+...||||+|||++||+++++-|+...+        ......+...+. 
T Consensus       172 i----p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--------~~ql~~If~~lGt  239 (323)
T KOG0594|consen  172 I----PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--------IDQLFRIFRLLGT  239 (323)
T ss_pred             C----CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--------HHHHHHHHHHcCC
Confidence            2    22235667899999999999876 689999999999999999999999986543        111222222111 


Q ss_pred             ------CCccchhhhhcccccCCC-C-------HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          304 ------GGVGGVRKWVDRRLKDSY-P-------VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       304 ------~~~~~~~~~~~~~~~~~~-~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                            .+...+.++-. ...... +       +...+...+++.+||+.+|++|.|+..+++.
T Consensus       240 P~e~~Wp~v~~~~~~k~-~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  240 PNEKDWPGVSSLPDYKA-PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CCccCCCCccccccccc-cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                  11111111100 000000 1       1122478999999999999999999998763

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=9.4e-35  Score=271.30  Aligned_cols=243  Identities=15%  Similarity=0.205  Sum_probs=176.3

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|...  ++.+|+|++.....   ...+.+.+|+.++.++ +||||+++++++.+.+.+|+||||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG   81 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence            5899999999999985  67889988754322   2345688899999888 6999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++...+..++..+..+                 |++|+|+|||++.+    +.+||+|||+++....    .....
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~----~~~kl~Dfg~~~~~~~----~~~~~  153 (327)
T cd05617          82 DLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD----GHIKLTDYGMCKEGLG----PGDTT  153 (327)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC----CCEEEeccccceeccC----CCCce
Confidence            99999877665554443332                 34667999999887    5599999999875211    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||.........     ...+.....+.          ..
T Consensus       154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-----~~~~~~~~~~~----------~~  218 (327)
T cd05617         154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-----NTEDYLFQVIL----------EK  218 (327)
T ss_pred             ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-----ccHHHHHHHHH----------hC
Confidence            4567999999999999999999999999999999999999999643321111     11111111111          11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChH---HHHHHHHHHHHHhhhhhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR---QVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~---evl~~L~~~~~~~~~~~~  366 (381)
                        ....|...+..+.+++.+||+.||++|+++.   .+-+.++.-+....+|..
T Consensus       219 --~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~  270 (327)
T cd05617         219 --PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDL  270 (327)
T ss_pred             --CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHH
Confidence              1123445667899999999999999999864   223334444444445553

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=4.1e-34  Score=259.74  Aligned_cols=228  Identities=26%  Similarity=0.320  Sum_probs=166.8

Q ss_pred             ccccCCCceEEEEEEC--Cc--eEEEEEecccc-cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR--GK--DVIIFQRKLRR-SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~--~v~vk~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|++.  +.  .+++|...... ....+.+.+|++++.++ +||||+++++++...+..++||||+++|
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            5899999999999985  33  35666554322 22456788999999999 8999999999999999999999999999


Q ss_pred             CHHHHhcCCCC----------------CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccc
Q 016850          173 NLADCLRNPRN----------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFG  219 (381)
Q Consensus       173 sL~~~l~~~~~----------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG  219 (381)
                      +|.+++.....                ....++.                 .+|++|+|+||+++++    ..+||+|||
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~----~~~kl~dfg  157 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN----YVAKIADFG  157 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCC----CeEEECCCC
Confidence            99999975431                1222222                 1234677999999876    569999999


Q ss_pred             cccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHH
Q 016850          220 TAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKA  298 (381)
Q Consensus       220 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~  298 (381)
                      ++.....     .........+..|+|||++.+..++.++|||||||++|||++ |..||......        ....  
T Consensus       158 l~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~--  222 (270)
T cd05047         158 LSRGQEV-----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELYE--  222 (270)
T ss_pred             Cccccch-----hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--------HHHH--
Confidence            9863211     111112234668999999988889999999999999999997 99998532110        0111  


Q ss_pred             HHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          299 SEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                                   .+........+..++..+.+|+.+||..||.+||++.++++.|++++
T Consensus       223 -------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         223 -------------KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             -------------HHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence                         01111111223345668999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.1e-34  Score=263.15  Aligned_cols=236  Identities=16%  Similarity=0.208  Sum_probs=170.8

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||+|+||+||++.+.  ++.+|+|+.......   ..+.+..|+++++.++|+||+++++++...+.+++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            699999999999885  778999986543221   335678899999999999999999999999999999999999999


Q ss_pred             HHHhcCC----CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          175 ADCLRNP----RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       175 ~~~l~~~----~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      .+++...    ....+..+..                 +|++|+|+||+++++    +.+||+|||++..+..    ...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~----~~~~l~dfg~~~~~~~----~~~  152 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDND----GNVRISDLGLAVELKD----GQS  152 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEEeeCccceecCC----CCc
Confidence            9887432    2233332222                 234567999999876    5699999999976532    111


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......       . ........          .
T Consensus       153 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-------~-~~~~~~~~----------~  214 (280)
T cd05608         153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-------E-NKELKQRI----------L  214 (280)
T ss_pred             cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-------h-HHHHHHhh----------c
Confidence            2334579999999999999999999999999999999999999996432110       0 00000000          0


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~  366 (381)
                      ..  ...++..+++.+.+++.+||+.||++||     ++++++   +.-+.+..+|..
T Consensus       215 ~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l---~h~~~~~~~~~~  267 (280)
T cd05608         215 ND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLR---THPLFRDLNWRQ  267 (280)
T ss_pred             cc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHh---cChhhhcCCHhH
Confidence            00  1123445677899999999999999999     455554   344445556664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-34  Score=258.07  Aligned_cols=229  Identities=20%  Similarity=0.306  Sum_probs=170.9

Q ss_pred             cccccCCCceEEEEEEC-CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      +.||+|+||.||++.+. ++.|++|+....... ..+.+.+|++++++++|+||+++++++.+.+..++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            35899999999999986 788999876544333 4567899999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ......+.                 ..|++|+|+||+++.+    ..+||+|||++......  ........
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~----~~~~l~d~g~~~~~~~~--~~~~~~~~  154 (251)
T cd05041          81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGEN----NVLKISDFGMSREEEGG--IYTVSDGL  154 (251)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCC----CcEEEeeccccccccCC--cceecccc
Confidence            9996532 22322222                 2345677999999876    56999999999764311  11111112


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||++.++.++.++|||||||++|||++ |..||......        ...    ..           +...
T Consensus       155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~----~~-----------~~~~  211 (251)
T cd05041         155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTR----ER-----------IESG  211 (251)
T ss_pred             CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHH----HH-----------HhcC
Confidence            334677999999988889999999999999999999 88888532210        000    11           1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      .....+...+..+.+++.+||..+|.+||++.|+++.|+
T Consensus       212 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         212 YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            112223445678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1e-35  Score=281.90  Aligned_cols=176  Identities=19%  Similarity=0.256  Sum_probs=144.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-C-----CCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-H-----SSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h-----~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.|.+|...  ++.||||+++.+... ..+-..|+.+|..|+ |     -|||+++++|.-.+++|||+|+
T Consensus       191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfEL  269 (586)
T KOG0667|consen  191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFEL  269 (586)
T ss_pred             EEEecccccceeEEEEecCCCcEEEEEeeccChHH-HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehh
Confidence            457899999999999985  788999997655443 355677999999996 4     3899999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCC--cc-----------------chHHHHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          169 VSGANLADCLRNPRNPS--FT-----------------VLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~--~~-----------------~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      + .-+|.++|+.++...  ..                 ....+|.||||+||||.+-+.  ..|||+|||.|.....   
T Consensus       270 L-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r--~~vKVIDFGSSc~~~q---  343 (586)
T KOG0667|consen  270 L-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR--SRIKVIDFGSSCFESQ---  343 (586)
T ss_pred             h-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc--CceeEEecccccccCC---
Confidence            9 589999999876433  11                 222345688999999998766  6899999999987432   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcccccccc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFD  283 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~  283 (381)
                          .....+-+..|+|||++.+..|+.+.||||||||+.||++|.+.|++..+
T Consensus       344 ----~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne  393 (586)
T KOG0667|consen  344 ----RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNE  393 (586)
T ss_pred             ----cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCH
Confidence                22266779999999999999999999999999999999999999975443

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3.7e-35  Score=279.32  Aligned_cols=232  Identities=13%  Similarity=0.148  Sum_probs=167.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.||+|++....   ......+.+|+++|++++||||+++++.+.+++.+|||||||+
T Consensus         5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~   84 (376)
T cd05598           5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP   84 (376)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCC
Confidence            3578999999999999985  7889999864322   1235668899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC---
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---  230 (381)
                      +|+|.++|..........+..+                 |+||+|+|||++.+    +.+||+|||++..+......   
T Consensus        85 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~----~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          85 GGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD----GHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCC----CCEEEEeCCCCcccccccccccc
Confidence            9999999987665554433222                 34567889888876    56999999997533110000   


Q ss_pred             ------------------------------------ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhC
Q 016850          231 ------------------------------------ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG  274 (381)
Q Consensus       231 ------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg  274 (381)
                                                          ........+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G  240 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG  240 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence                                                00011235799999999999988999999999999999999999


Q ss_pred             CccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC---ChHHHH
Q 016850          275 EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP---DMRQVT  351 (381)
Q Consensus       275 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl  351 (381)
                      +.||.....           .+........         ...........+++.+.+++.+|+ .+|.+|+   ++.+++
T Consensus       241 ~~Pf~~~~~-----------~~~~~~i~~~---------~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell  299 (376)
T cd05598         241 QPPFLADTP-----------AETQLKVINW---------ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIK  299 (376)
T ss_pred             CCCCCCCCH-----------HHHHHHHhcc---------CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence            999964321           0111111100         001111112235677889999976 5999999   777775


Q ss_pred             H
Q 016850          352 G  352 (381)
Q Consensus       352 ~  352 (381)
                      +
T Consensus       300 ~  300 (376)
T cd05598         300 A  300 (376)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.9e-34  Score=261.44  Aligned_cols=233  Identities=19%  Similarity=0.286  Sum_probs=170.8

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.     +..+++|....... ...+.+.+|+.++++++||||+++++++.+++..++||||++
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (267)
T cd05066           9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME   88 (267)
T ss_pred             eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence            567899999999999873     23577777543322 235678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... ......+..                 .|++|+|.||+++.+    ..++|+|||++..+..... ..
T Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~----~~~~l~dfg~~~~~~~~~~-~~  163 (267)
T cd05066          89 NGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSN----LVCKVSDFGLSRVLEDDPE-AA  163 (267)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCC----CeEEeCCCCcccccccccc-ee
Confidence            999999997643 223222222                 234677999999876    5699999999987532111 11


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......++..|+|||++.+..++.++|||||||++||+++ |..||......        .....    +.        
T Consensus       164 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~----~~--------  223 (267)
T cd05066         164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKA----IE--------  223 (267)
T ss_pred             eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHH----Hh--------
Confidence            11122334578999999988889999999999999999886 99998532210        11111    10        


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                         .......+..+++.+.+++.+||+.+|.+||++.++++.|+++
T Consensus       224 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         224 ---EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ---CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence               0111122334567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=3.2e-34  Score=258.42  Aligned_cols=228  Identities=23%  Similarity=0.314  Sum_probs=169.3

Q ss_pred             ccccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+.+ ..+++|.... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|.
T Consensus         9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   87 (256)
T cd05113           9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL   87 (256)
T ss_pred             eeEecCcccceEEEEEecCCCcEEEEEcCC-CcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence            4679999999999998865 4688887643 2334578999999999999999999999999989999999999999999


Q ss_pred             HHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ...+.++..+                 |.+|+|.||+++++    ..+||+|||+++.....   .......
T Consensus        88 ~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~----~~~kl~d~g~~~~~~~~---~~~~~~~  160 (256)
T cd05113          88 NYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQ----GCVKVSDFGLSRYVLDD---EYTSSVG  160 (256)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC----CCEEECCCccceecCCC---ceeecCC
Confidence            9997643 3343332222                 23566999999876    56999999998765321   1111122


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||++.+..++.++|||||||++|+|++ |+.||......        ...+.   ..            ..
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~---~~------------~~  217 (256)
T cd05113         161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEK---VS------------QG  217 (256)
T ss_pred             CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHH---Hh------------cC
Confidence            345678999999988889999999999999999998 99998532210        11111   11            01


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      .....+...+..+.+++.+||+.||.+||++.+|++.|+
T Consensus       218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         218 LRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            111112234678999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.6e-35  Score=279.26  Aligned_cols=227  Identities=16%  Similarity=0.199  Sum_probs=166.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||++++.  ++.+|+|......   ......+.+|+.+++.++||||+++++++.+++.+|+|||||+
T Consensus        47 ~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~  126 (370)
T cd05621          47 VVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMP  126 (370)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCC
Confidence            3567899999999999985  6788888764322   1234568899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.... .+...+.                 .+|++|+|+|||++.+    +.+||+|||++..+..   ....
T Consensus       127 gg~L~~~l~~~~-~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~----~~~kL~DFG~a~~~~~---~~~~  198 (370)
T cd05621         127 GGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKH----GHLKLADFGTCMKMDE---TGMV  198 (370)
T ss_pred             CCcHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC----CCEEEEecccceeccc---CCce
Confidence            999999997643 3322222                 2334677999999876    5699999999986532   1111


Q ss_pred             cccccCCCccccchhhhcCC----CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          234 KVNKIEGTRGYMAPEFQASG----VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~----~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .....+||+.|+|||++.+.    .++.++|||||||++|||++|+.||.....           .......        
T Consensus       199 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-----------~~~~~~i--------  259 (370)
T cd05621         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-----------VGTYSKI--------  259 (370)
T ss_pred             ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-----------HHHHHHH--------
Confidence            23456799999999998653    378999999999999999999999963211           1111111        


Q ss_pred             hhhhcccccCCC--CHHHHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 016850          310 RKWVDRRLKDSY--PVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~  352 (381)
                         ........+  ...++..+++++.+||..++.+  |+++.|+++
T Consensus       260 ---~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         260 ---MDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             ---HhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence               111111111  2245778999999999865544  889888865

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=5.6e-34  Score=259.83  Aligned_cols=225  Identities=20%  Similarity=0.294  Sum_probs=172.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.|+||.||+|.+.  +..|++|....... ...+.+.+|+++++++.||||+++++++.+++..++||||+++|+
T Consensus         9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (277)
T cd06640           9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGS   88 (277)
T ss_pred             hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCc
Confidence            467999999999999874  67888887654332 245678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.... ....++..                 .|.+|+|+||+++.+    ..++|+|||++..+..    ......
T Consensus        89 L~~~i~~~~-l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~----~~~~l~dfg~~~~~~~----~~~~~~  159 (277)
T cd06640          89 ALDLLRAGP-FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ----GDVKLADFGVAGQLTD----TQIKRN  159 (277)
T ss_pred             HHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC----CCEEEcccccceeccC----Cccccc
Confidence            999997643 33222222                 223566999999876    5599999999976532    111223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...++..|+|||++.+..++.++|||||||++|||++|+.||......           .            ........
T Consensus       160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----------~------------~~~~~~~~  216 (277)
T cd06640         160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----------R------------VLFLIPKN  216 (277)
T ss_pred             cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----------h------------HhhhhhcC
Confidence            456889999999998888999999999999999999999998632211           0            00001111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      ..+..+..++..+.+++.+||+.+|++||++.++++.
T Consensus       217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         217 NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            2233455677889999999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.5e-34  Score=260.27  Aligned_cols=226  Identities=16%  Similarity=0.216  Sum_probs=171.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||++.+.  ++.+++|...... ....+.+.+|+.++++++|+||+++++.+.+.+.+++||||+++|+
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   84 (255)
T cd08219           5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGD   84 (255)
T ss_pred             EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCc
Confidence            567999999999999885  7889999865432 2346778899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          174 LADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       174 L~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.+++....  ......+..|                 |.+|+|.||++++.    ..++|+|||++.....    ....
T Consensus        85 l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~----~~~~l~dfg~~~~~~~----~~~~  156 (255)
T cd08219          85 LMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN----GKVKLGDFGSARLLTS----PGAY  156 (255)
T ss_pred             HHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCC----CcEEEcccCcceeecc----cccc
Confidence            999986532  2333332222                 23466889888876    5599999999876532    1112


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....|++.|+|||++.+..++.++||||||+++|+|++|..||.....           ........            
T Consensus       157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----------~~~~~~~~------------  213 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----------KNLILKVC------------  213 (255)
T ss_pred             cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----------HHHHHHHh------------
Confidence            2346689999999999888899999999999999999999999953210           11111111            


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      .......+..++..+.+|+.+||+.||++||++.+++..
T Consensus       214 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         214 QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            111112334566789999999999999999999999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=5.6e-34  Score=260.17  Aligned_cols=235  Identities=20%  Similarity=0.294  Sum_probs=169.0

Q ss_pred             ccccccCCCceEEEEEEC--Cc----eEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GK----DVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~----~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+.  ++    .+++|........ ...++..|+.++.++.|||||++++++.. ...++++||+
T Consensus        12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~   90 (279)
T cd05111          12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLS   90 (279)
T ss_pred             ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeC
Confidence            467999999999999983  43    3566665322221 24567788889999999999999998754 5578999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ...+..+..|                 |++|+|.||+++++    ..+||+|||+++.+...  ..
T Consensus        91 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~----~~~kl~Dfg~~~~~~~~--~~  164 (279)
T cd05111          91 PLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSD----SIVQIADFGVADLLYPD--DK  164 (279)
T ss_pred             CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC----CcEEEcCCccceeccCC--Cc
Confidence            9999999997643 3343333332                 33567999999876    56999999999865321  11


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........++..|+|||++.++.++.++|||||||++||+++ |+.||......        ..    ...+        
T Consensus       165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--------~~----~~~~--------  224 (279)
T cd05111         165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--------EV----PDLL--------  224 (279)
T ss_pred             ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HH----HHHH--------
Confidence            112234557789999999988899999999999999999998 99998632210        01    1111        


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                         ........+..++..+.+++.+||..||++||++.|+++.|+.+....
T Consensus       225 ---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~  272 (279)
T cd05111         225 ---EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP  272 (279)
T ss_pred             ---HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence               111111112224557889999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.5e-34  Score=265.11  Aligned_cols=234  Identities=22%  Similarity=0.269  Sum_probs=169.3

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|..+       +..||+|........ ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        10 i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   89 (288)
T cd05061          10 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVME   89 (288)
T ss_pred             eeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            3567999999999999763       347888875433222 34567889999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCC----------CccchH-----------------HHHHHhhhcceeecccCCCccceEEccccc
Q 016850          168 HVSGANLADCLRNPRNP----------SFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~----------~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      |+++|+|.+++......          ....+.                 .+|++|+|+||+++++    ..++|+|||+
T Consensus        90 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~----~~~~L~Dfg~  165 (288)
T cd05061          90 LMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD----FTVKIGDFGM  165 (288)
T ss_pred             CCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCC----CcEEECcCCc
Confidence            99999999999753210          111111                 1233577999999876    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++.+....  .........++..|+|||.+.++.++.++|||||||++|||++ |..||.....           .+ ..
T Consensus       166 ~~~~~~~~--~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----------~~-~~  231 (288)
T cd05061         166 TRDIYETD--YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----------EQ-VL  231 (288)
T ss_pred             cccccccc--cccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----------HH-HH
Confidence            97643211  1111122345778999999988889999999999999999998 7888853211           01 11


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ..+          .+. .....+..+++.+.+++.+||+.||++||++.++++.|++.+
T Consensus       232 ~~~----------~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         232 KFV----------MDG-GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHH----------HcC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            111          000 011122334578999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1.9e-34  Score=260.33  Aligned_cols=228  Identities=24%  Similarity=0.385  Sum_probs=170.2

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .++||+|+||.||+|..+ ++.+++|.... .....+++.+|+.++++++|+||+++++++. .+..++||||+++|+|.
T Consensus        11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~   88 (260)
T cd05067          11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQ-GSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLV   88 (260)
T ss_pred             eeeeccCccceEEeeecCCCceEEEEEecC-CCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHH
Confidence            567999999999999985 67888887643 2335678999999999999999999999874 45689999999999999


Q ss_pred             HHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  .....++..                 .|++|+|+||+++++    ..++|+|||++.....   .......
T Consensus        89 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~----~~~~l~dfg~~~~~~~---~~~~~~~  161 (260)
T cd05067          89 DFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSET----LCCKIADFGLARLIED---NEYTARE  161 (260)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCC----CCEEEccCcceeecCC---CCccccc
Confidence            9987543  233222222                 223566999999886    5699999999976532   1111122


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||++.+..++.++||||||+++||+++ |+.||......        ....               .+..
T Consensus       162 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~---------------~~~~  218 (260)
T cd05067         162 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQ---------------NLER  218 (260)
T ss_pred             CCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHH---------------HHHc
Confidence            3456789999999988889999999999999999999 99999632210        1111               0111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ......+...+..+.+++.+||..||++||+++++++.|+.
T Consensus       219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         219 GYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            11122233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.4e-34  Score=264.92  Aligned_cols=226  Identities=18%  Similarity=0.271  Sum_probs=172.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|...  ++.+++|..........+.+.+|+.+++.++|+||+++++.+..+...|+||||+++|+|
T Consensus        25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L  104 (296)
T cd06654          25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL  104 (296)
T ss_pred             EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCH
Confidence            457999999999999874  788999987665555567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++.... ....++..                 .|.+|+|.||+++.+    ..+||+|||++.....    .......
T Consensus       105 ~~~~~~~~-~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~----~~~kl~dfg~~~~~~~----~~~~~~~  175 (296)
T cd06654         105 TDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD----GSVKLTDFGFCAQITP----EQSKRST  175 (296)
T ss_pred             HHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC----CCEEECccccchhccc----cccccCc
Confidence            99997543 23222222                 234667999999876    5699999999876422    1112234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ..|++.|+|||.+.+..++.++|||||||++|+|++|+.||.....           .........          ....
T Consensus       176 ~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~-----------~~~~~~~~~----------~~~~  234 (296)
T cd06654         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----------LRALYLIAT----------NGTP  234 (296)
T ss_pred             ccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH-----------HHhHHHHhc----------CCCC
Confidence            5689999999999888889999999999999999999999963221           000000000          0000


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..++..+.+++.+||..||++||++.++++
T Consensus       235 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         235 ELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             CCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            11123456678999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-35  Score=281.30  Aligned_cols=229  Identities=19%  Similarity=0.281  Sum_probs=173.8

Q ss_pred             ccccCCCceEEEEEECCceE--EEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           99 KFTSSSASASWRGTIRGKDV--IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~v--~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      .||+|.||+||-|++..+.|  |||-+..+.....+-+..||.+.++|+|.|||+++|.+..++.+-|+||-+|||+|..
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            47999999999999986554  5555444444456779999999999999999999999999999999999999999999


Q ss_pred             HhcCCC-CC---------CccchHHHHHHhhhcceeecccCCC-------ccceEEcccccccccccCCCCccccccccC
Q 016850          177 CLRNPR-NP---------SFTVLSTWLSRMQSSSIIVSEENAG-------SLCAKICHFGTAELCGEVSGNESGKVNKIE  239 (381)
Q Consensus       177 ~l~~~~-~~---------~~~~~~~~~~~l~~~Nill~~~~~~-------~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~  239 (381)
                      +|...- .+         -.+|++..+.+||-..|+|++.+.+       .+++||+|||.++.+-    +.+....++.
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA----ginP~TETFT  737 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA----GINPCTETFT  737 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc----cCCccccccc
Confidence            997632 21         1344555555555555555444332       2679999999998753    2334456788


Q ss_pred             CCccccchhhhcCC--CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          240 GTRGYMAPEFQASG--VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       240 gt~~y~aPE~~~~~--~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ||..|||||++..+  .|+.++|||||||++.||.||++||-......         ...            .+.---..
T Consensus       738 GTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---------AAM------------FkVGmyKv  796 (1226)
T KOG4279|consen  738 GTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---------AAM------------FKVGMYKV  796 (1226)
T ss_pred             cchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---------Hhh------------hhhcceec
Confidence            99999999999765  58999999999999999999999996432210         000            00000112


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+..|...+.+++.+|.+|+..||.+||+|.++|+
T Consensus       797 HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  797 HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            45678899999999999999999999999999964

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=5.4e-34  Score=257.42  Aligned_cols=228  Identities=25%  Similarity=0.372  Sum_probs=169.0

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|... +..+++|..... ....+.+.+|+.++++++|+||+++++++.. +..++||||+++++|.
T Consensus        11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~   88 (260)
T cd05070          11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPG-TMSPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLL   88 (260)
T ss_pred             hheeccccCceEEEEEecCCceeEEEEecCC-CCCHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEecCCCcHH
Confidence            467999999999999886 567777776442 2346789999999999999999999998754 5678999999999999


Q ss_pred             HHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  ..++..+..                 .|++|+|.||+++++    ..++|+|||++..+...   ......
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~----~~~~l~dfg~~~~~~~~---~~~~~~  161 (260)
T cd05070          89 DFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDG----LVCKIADFGLARLIEDN---EYTARQ  161 (260)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCC----ceEEeCCceeeeeccCc---cccccc
Confidence            9997643  233322222                 233566899999876    56999999999765321   111122


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||++.+..++.++||||||+++|||++ |..||.....        ....+.               +..
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~---------------~~~  218 (260)
T cd05070         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQ---------------VER  218 (260)
T ss_pred             CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHH---------------HHc
Confidence            3345678999999988889999999999999999999 8899863211        011111               111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ......+...+..+.+|+.+||..||++|||+.++++.|++
T Consensus       219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         219 GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            11222334556789999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-36  Score=279.08  Aligned_cols=227  Identities=14%  Similarity=0.207  Sum_probs=174.0

Q ss_pred             ccccccCCCceEEEEEECCce--EEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIRGKD--VIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~--v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ...||.|+||+||+|..+...  .|.|++..+.....+++.-||+||..++||+||+|++.|.-.+.+||+.|||.||-+
T Consensus        37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV  116 (1187)
T KOG0579|consen   37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV  116 (1187)
T ss_pred             HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence            456999999999999987443  455666666666788999999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNP-RNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~-~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +..+-+- +.+.+.++                 ..+|+||+..|||+.-+    +.++|+|||++....    .......
T Consensus       117 DaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld----GdirLADFGVSAKn~----~t~qkRD  188 (1187)
T KOG0579|consen  117 DAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD----GDIRLADFGVSAKNK----STRQKRD  188 (1187)
T ss_pred             hHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec----CcEeeecccccccch----hHHhhhc
Confidence            8877553 23333332                 23456777888888777    559999999986532    2334556


Q ss_pred             ccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          237 KIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .+.|||.|||||+..     ...|++++|||||||+|.||..+.+|....           +....+..+....      
T Consensus       189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel-----------npMRVllKiaKSe------  251 (1187)
T KOG0579|consen  189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL-----------NPMRVLLKIAKSE------  251 (1187)
T ss_pred             cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc-----------chHHHHHHHhhcC------
Confidence            799999999999764     567999999999999999999999996421           2222222211111      


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .+.  ...|..++..+.|++.+||.+||..||+++++++
T Consensus       252 --PPT--LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  252 --PPT--LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             --CCc--ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence              111  2246788999999999999999999999999974

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5e-34  Score=257.80  Aligned_cols=231  Identities=15%  Similarity=0.198  Sum_probs=173.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-----cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-----DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|++|.||+|...  ++.+++|........     ....+.+|++++++++||||+++++++.+.+.+++||||
T Consensus         6 ~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   85 (263)
T cd06625           6 RGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEY   85 (263)
T ss_pred             ccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEE
Confidence            4567899999999999874  788999886543221     235688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +++++|.+++.............                 +|++|+|.||+++++    ..++|+|||+++...... ..
T Consensus        86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~----~~~~l~dfg~~~~~~~~~-~~  160 (263)
T cd06625          86 MPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA----GNVKLGDFGASKRLQTIC-SS  160 (263)
T ss_pred             CCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CCEEEeecccceeccccc-cc
Confidence            99999999998755444333222                 234567999999876    569999999997643211 11


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........|+..|+|||++.+..++.++||||||+++|||++|+.||.....           ......           
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~-----------  218 (263)
T cd06625         161 GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA-----------MAAIFK-----------  218 (263)
T ss_pred             cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch-----------HHHHHH-----------
Confidence            1111345688999999999988899999999999999999999999853211           010001           


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      ..........+..++..+.+++.+||..+|.+||++.++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         219 IATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            111111223344567789999999999999999999999763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-34  Score=262.00  Aligned_cols=231  Identities=24%  Similarity=0.321  Sum_probs=171.5

Q ss_pred             cccccccCCCceEEEEEECC-------ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ....||+|+||.||+|...+       ..+++|....... .....+.+|+.+|+.++||||+++++++......++|||
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   89 (277)
T cd05032          10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVME   89 (277)
T ss_pred             EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEe
Confidence            35678999999999998753       5688888644332 234578899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC----------CCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccc
Q 016850          168 HVSGANLADCLRNPRN----------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~----------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      |+++|+|.+++.....          ..+..+..                 +|++|+|+||+++.+    +.+||+|||+
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~----~~~kl~dfg~  165 (277)
T cd05032          90 LMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED----LTVKIGDFGM  165 (277)
T ss_pred             cCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC----CCEEECCccc
Confidence            9999999999975332          12222222                 233567999999887    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++.+...  ..........++..|+|||.+.++.++.++|||||||++||+++ |+.||......        ....   
T Consensus       166 ~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~~~~---  232 (277)
T cd05032         166 TRDIYET--DYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--------EVLK---  232 (277)
T ss_pred             chhhccC--cccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--------HHHH---
Confidence            9764321  11112234457889999999988889999999999999999998 99998532210        1111   


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                       .           +........+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       233 -~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         233 -F-----------VIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             -H-----------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence             1           1111112223345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=4.9e-34  Score=258.78  Aligned_cols=233  Identities=21%  Similarity=0.306  Sum_probs=170.8

Q ss_pred             ccccccCCCceEEEEEEC--Cc---eEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GK---DVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~---~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|+..  ++   .+++|+..... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus        10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   89 (268)
T cd05063          10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYME   89 (268)
T ss_pred             eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCC
Confidence            467899999999999974  32   57777764432 2245678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... .....++..                 .|++|+|+||+++++    ..+||+|||++........ ..
T Consensus        90 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~----~~~kl~dfg~~~~~~~~~~-~~  164 (268)
T cd05063          90 NGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSN----LECKVSDFGLSRVLEDDPE-GT  164 (268)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCC----CcEEECCCccceecccccc-cc
Confidence            999999997643 333333322                 234677999999876    5699999999976532111 11


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........++.|+|||++.+..++.++|||||||++||+++ |+.||.....           .+ ....+         
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----------~~-~~~~i---------  223 (268)
T cd05063         165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----------HE-VMKAI---------  223 (268)
T ss_pred             eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----------HH-HHHHH---------
Confidence            11112223567999999988889999999999999999997 9999853211           01 11111         


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                        ........+..++..+.+++.+||+.||++||++.+|++.|+++
T Consensus       224 --~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         224 --NDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             --hcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence              11111122234567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.2e-33  Score=255.83  Aligned_cols=234  Identities=16%  Similarity=0.264  Sum_probs=176.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|...  ++.+++|.++....   ...+.+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus         6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   85 (267)
T cd08224           6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELAD   85 (267)
T ss_pred             eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCC
Confidence            3567899999999999985  88899997654222   235678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC----CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          171 GANLADCLRNP----RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       171 ~gsL~~~l~~~----~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|+|.+++...    ......++..+                 |.+|+|.||+++.+    ..++|+|||++..+..   
T Consensus        86 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~----~~~~l~d~~~~~~~~~---  158 (267)
T cd08224          86 AGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITAT----GVVKLGDLGLGRFFSS---  158 (267)
T ss_pred             CCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCC----CcEEEeccceeeeccC---
Confidence            99999998642    22333333322                 23566999999876    5599999999876432   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                       .........|++.|+|||.+.+..++.++|||||||++|+|++|+.||.....         ...+....         
T Consensus       159 -~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~---------  219 (267)
T cd08224         159 -KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---------NLYSLCKK---------  219 (267)
T ss_pred             -CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---------cHHHHHhh---------
Confidence             11122345689999999999888899999999999999999999999853211         11111111         


Q ss_pred             hhhhcccccCCCCH-HHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          310 RKWVDRRLKDSYPV-EVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       310 ~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                         +........+. .++..+.+++.+||..+|.+||++.+|++.|+++.
T Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         220 ---IEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ---hhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence               11111112222 56678999999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=7.2e-34  Score=263.88  Aligned_cols=237  Identities=22%  Similarity=0.315  Sum_probs=172.5

Q ss_pred             cccccccCCCceEEEEEEC---------CceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|+..         ...+++|....... .....+.+|+++++++ +||||+++++++.+.+.+++
T Consensus        16 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   95 (314)
T cd05099          16 LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYV   95 (314)
T ss_pred             eeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEE
Confidence            4678999999999999752         34577777553322 2356788999999999 69999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCC----------------CCcc-------chHH----------HHHHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRN----------------PSFT-------VLST----------WLSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~----------------~~~~-------~~~~----------~~~~l~~~Nill~~~~~~~~  211 (381)
                      ||||+++|+|.+++.....                ..+.       ++..          .|++|+|+||+++++    .
T Consensus        96 v~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~----~  171 (314)
T cd05099          96 IVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTED----N  171 (314)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCC----C
Confidence            9999999999999976421                1211       1222          233567899999876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++......  .........++..|+|||++.+..++.++|||||||++|||++ |..||.....       
T Consensus       172 ~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-------  242 (314)
T cd05099         172 VMKIADFGLARGVHDID--YYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-------  242 (314)
T ss_pred             cEEEccccccccccccc--cccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-------
Confidence            69999999998653211  1111122334568999999988889999999999999999999 8888853211       


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                       .....    .+           ........+..++.++.+++.+||..||++||++.++++.|+++....
T Consensus       243 -~~~~~----~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         243 -EELFK----LL-----------REGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             -HHHHH----HH-----------HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence             01111    11           111112223455678999999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.8e-34  Score=270.47  Aligned_cols=242  Identities=15%  Similarity=0.179  Sum_probs=167.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~e  167 (381)
                      .+.||+|+||.||+|+..  ++.||+|++....  .....++.+|+++|++++||||+++++++...     ..+|+|||
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e   84 (338)
T cd07859           5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE   84 (338)
T ss_pred             EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence            567999999999999974  7889999875432  22455788999999999999999999988643     35899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      || +++|.+++..........+..+                 |++|+|+|||++.+    +.+||+|||+++...... .
T Consensus        85 ~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~----~~~kL~Dfg~~~~~~~~~-~  158 (338)
T cd07859          85 LM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANAD----CKLKICDFGLARVAFNDT-P  158 (338)
T ss_pred             cC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----CcEEEccCcccccccccc-C
Confidence            99 5799999987665554433322                 34567999999876    569999999997642211 1


Q ss_pred             ccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc-----
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA-----  303 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----  303 (381)
                      .........||+.|+|||++.+  ..++.++|||||||++|||++|++||......        ...........     
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~~  230 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--------HQLDLITDLLGTPSPE  230 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--------HHHHHHHHHhCCCCHH
Confidence            1112245679999999999875  57899999999999999999999999643210        00000000000     


Q ss_pred             -------CCccchhhhhcccccCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 -------GGVGGVRKWVDRRLKDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 -------~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             .....+...+........   .+..++.+.+++.+||+.||++||++.|+++
T Consensus       231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence                   000000000111110000   0123567899999999999999999999975

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.8e-33  Score=268.96  Aligned_cols=256  Identities=16%  Similarity=0.128  Sum_probs=174.5

Q ss_pred             cccccccCCCceEEEEEEC----CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR----GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||++...    +..|++|.....     ....+|+++|++|+|||||++++++...+..|+||||+ .
T Consensus        96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~  169 (392)
T PHA03207         96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY-K  169 (392)
T ss_pred             EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc-C
Confidence            4578999999999999764    356777764321     34578999999999999999999999999999999999 4


Q ss_pred             CCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      ++|.+++.....+++..+..                 +|++|||+|||++..    +.+||+|||+++.+...  .....
T Consensus       170 ~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~----~~~~l~DfG~a~~~~~~--~~~~~  243 (392)
T PHA03207        170 CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEP----ENAVLGDFGAACKLDAH--PDTPQ  243 (392)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC----CCEEEccCccccccCcc--ccccc
Confidence            89999996655555443332                 334677999999876    56999999999765321  11122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc--------
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV--------  306 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  306 (381)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||.........     .....+...+....        
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-----~~l~~i~~~~~~~~~~~~~~~~  318 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSS-----SQLRSIIRCMQVHPLEFPQNGS  318 (392)
T ss_pred             ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcH-----HHHHHHHHHhccCccccCCccc
Confidence            23567999999999999889999999999999999999999999654322100     00110100000000        


Q ss_pred             cchhhh---hcccccCCC--C-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCC
Q 016850          307 GGVRKW---VDRRLKDSY--P-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFP  371 (381)
Q Consensus       307 ~~~~~~---~~~~~~~~~--~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~  371 (381)
                      ..+...   +....+..+  +     ...+.++.++|.+||+.||++||++.|++..   -+.....|..+.-.|
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~---p~f~~~~~~~~~~~~  390 (392)
T PHA03207        319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL---PLFTKEPINLLNITP  390 (392)
T ss_pred             hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC---chhhccchhhhcCcc
Confidence            000000   000111111  1     1235678899999999999999999999653   344445555544333

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=5.2e-34  Score=261.50  Aligned_cols=232  Identities=19%  Similarity=0.236  Sum_probs=169.4

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ....||+|+||.||+|.+.       ++.|++|........ ...++.+|+.++++++||||+++++++.+++..++|||
T Consensus         9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   88 (288)
T cd05050           9 YVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFE   88 (288)
T ss_pred             ecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEe
Confidence            3567999999999999863       467888876543322 35678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC----------------------CCccchH-----------------HHHHHhhhcceeecccCC
Q 016850          168 HVSGANLADCLRNPRN----------------------PSFTVLS-----------------TWLSRMQSSSIIVSEENA  208 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~----------------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~  208 (381)
                      |+++|+|.+++.....                      .....+.                 .+|++|+|.||+++++  
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~--  166 (288)
T cd05050          89 YMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN--  166 (288)
T ss_pred             cCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC--
Confidence            9999999999975321                      1111111                 2334677999999876  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGID  287 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~  287 (381)
                        ..++|+|||++..+....  .........++..|+|||.+.+..++.++|||||||++|||++ |..||.....    
T Consensus       167 --~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~----  238 (288)
T cd05050         167 --MVVKIADFGLSRNIYSAD--YYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH----  238 (288)
T ss_pred             --CceEECccccceecccCc--cccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH----
Confidence              569999999987642211  1111222345678999999988899999999999999999997 8788742211    


Q ss_pred             cccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                             .+.... +.          +.. ....+..++..+.+|+.+||+.||.+||++.|+++.|++
T Consensus       239 -------~~~~~~-~~----------~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         239 -------EEVIYY-VR----------DGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             -------HHHHHH-Hh----------cCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                   111111 10          011 111233456789999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4.1e-34  Score=260.92  Aligned_cols=234  Identities=20%  Similarity=0.239  Sum_probs=171.1

Q ss_pred             ccccccCCCceEEEEEEC--Cc----eEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GK----DVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~----~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||+||+|++.  +.    .||+|........ ....+.+|+.+++.++||||+++++++... ..+++|||+
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~~~   90 (279)
T cd05109          12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQLM   90 (279)
T ss_pred             eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEEcC
Confidence            567999999999999873  33    4788876543322 356788999999999999999999998754 468999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ..+...+..                 +|++|+|+||+++++    ..+||+|||+++.+....  .
T Consensus        91 ~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~----~~~kL~dfG~~~~~~~~~--~  164 (279)
T cd05109          91 PYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSP----NHVKITDFGLARLLDIDE--T  164 (279)
T ss_pred             CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC----CcEEECCCCceeeccccc--c
Confidence            9999999997643 344333332                 234667999998776    459999999998753211  1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+++.|+|||.+.+..++.++|||||||++|||++ |..||.....        .....              
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~--------------  222 (279)
T cd05109         165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--------REIPD--------------  222 (279)
T ss_pred             eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH--------------
Confidence            111122345678999999988889999999999999999998 8999853211        01111              


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                       .+........+..++..+.+++.+||+.||++||++.++++.|+++...
T Consensus       223 -~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         223 -LLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             -HHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence             1111111222334567899999999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=3.7e-34  Score=266.02  Aligned_cols=182  Identities=17%  Similarity=0.196  Sum_probs=135.5

Q ss_pred             cccccccCCCceEEEEEEC----CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR----GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~  169 (381)
                      .+.+||+|+||.||+|+..    +..||+|.....  .....+.+|+++|++++||||+++++++..  +...++||||+
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA   82 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence            3567999999999999974    357888875432  234568899999999999999999998853  56789999999


Q ss_pred             CCCCHHHHhcCCC---------CCCccch-------H----------HHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          170 SGANLADCLRNPR---------NPSFTVL-------S----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       170 ~~gsL~~~l~~~~---------~~~~~~~-------~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      + ++|.+++....         ..+...+       .          .+|++|+|+||++...+..++.+||+|||+++.
T Consensus        83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          83 E-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             C-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            5 68888875321         1222111       1          223467799999965544457899999999987


Q ss_pred             cccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCcccccc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFV  281 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~  281 (381)
                      +..... .........||+.|+|||++.+ ..++.++|||||||++|||++|++||...
T Consensus       162 ~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         162 FNSPLK-PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCCCcc-cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            543211 1122345678999999998876 45799999999999999999999999643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.8e-34  Score=255.83  Aligned_cols=225  Identities=20%  Similarity=0.246  Sum_probs=171.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|++|.||+|+..  ++.|++|......  ....+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08529           5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG   84 (256)
T ss_pred             eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence            467899999999999984  7889998865432  235677889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCC--CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNP--RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~--~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++...  .......+..                 .|.+|+|+||+++++    ..++|+|||+++.+..    ...
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~----~~~~l~df~~~~~~~~----~~~  156 (256)
T cd08529          85 DLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY----DNVKIGDLGVAKLLSD----NTN  156 (256)
T ss_pred             cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC----CCEEEcccccceeccC----ccc
Confidence            999999764  2233222221                 223566999999886    5599999999886532    112


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|++.|+|||++.+..++.++|||||||++|+|++|+.||......        ...   ....           
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~---~~~~-----------  214 (256)
T cd08529         157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--------ALI---LKII-----------  214 (256)
T ss_pred             hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------HHH---HHHH-----------
Confidence            223456899999999999888999999999999999999999999632210        001   1111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .......+..++..+.+++.+||+.+|++||++.++++
T Consensus       215 -~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         215 -RGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             -cCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence             11112223356678999999999999999999999976

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=8.4e-34  Score=259.43  Aligned_cols=248  Identities=16%  Similarity=0.200  Sum_probs=173.5

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e  167 (381)
                      .+.||+|+||+||++.+      .++.||+|....... .....+.+|+++|++++||||+++++++..  ...+++|||
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (283)
T cd05080           9 IRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIME   88 (283)
T ss_pred             ceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEec
Confidence            46799999999988764      356788888654432 245678899999999999999999998875  346899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+++|+|.+++.... ..+.++..                 +|.+|+|+||+++++    ..+||+|||+++....... 
T Consensus        89 ~~~~~~l~~~~~~~~-l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~----~~~~l~dfg~~~~~~~~~~-  162 (283)
T cd05080          89 YVPLGSLRDYLPKHK-LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDND----RLVKIGDFGLAKAVPEGHE-  162 (283)
T ss_pred             CCCCCCHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCC----CcEEEeecccccccCCcch-
Confidence            999999999997643 34333322                 233567999999876    5699999999986532111 


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .........++..|+|||.+.+..++.++||||||+++|||++|..||......-.      ........  ......+.
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~~~--~~~~~~~~  234 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE------EMIGPKQG--QMTVVRLI  234 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh------hhhccccc--ccchhhhh
Confidence            01112233466789999999888899999999999999999999999853221100      00000000  00001111


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ...........+..++..+.+++.+||+.||.+||++.+|++.|+++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         235 ELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            112222222234456678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.6e-34  Score=261.65  Aligned_cols=233  Identities=25%  Similarity=0.306  Sum_probs=170.4

Q ss_pred             ccccccCCCceEEEEEEC--Cc--eEEEEEeccc-ccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GK--DVIIFQRKLR-RSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~--~v~vk~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|...  +.  .+++|..+.. .....+.+.+|++++.++ +||||+++++++.+.+.+++||||++
T Consensus         7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~   86 (297)
T cd05089           7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP   86 (297)
T ss_pred             eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence            467899999999999885  22  3566665432 222456789999999999 79999999999999999999999999


Q ss_pred             CCCHHHHhcCCCC----------------CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcc
Q 016850          171 GANLADCLRNPRN----------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       171 ~gsL~~~l~~~~~----------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      +|+|.+++.....                .....+.                 .+|++|+|+||+++++    ..+||+|
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~----~~~kl~d  162 (297)
T cd05089          87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN----LASKIAD  162 (297)
T ss_pred             CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC----CeEEECC
Confidence            9999999975321                2222221                 2344677999999876    5699999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      ||++.....     .........+..|+|||++.+..++.++|||||||++|||++ |..||......        ....
T Consensus       163 fg~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--------~~~~  229 (297)
T cd05089         163 FGLSRGEEV-----YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--------ELYE  229 (297)
T ss_pred             cCCCccccc-----eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHH
Confidence            999864211     011111233567999999988889999999999999999997 99998532110        0111


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                                     .+........+..++..+.+|+.+||+.||.+||+++++++.|+.+....
T Consensus       230 ---------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         230 ---------------KLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             ---------------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence                           11111222233446678999999999999999999999999999887644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.4e-34  Score=262.67  Aligned_cols=232  Identities=20%  Similarity=0.272  Sum_probs=161.3

Q ss_pred             ccccCCCceEEEEEECC----ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIRG----KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~----~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||+|.+.+    ..+++|+....... ....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            58999999999998642    46788876544322 34578899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCC-----CCccc-------hHH----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          174 LADCLRNPRN-----PSFTV-------LST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       174 L~~~l~~~~~-----~~~~~-------~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      |.++|.....     .....       +..          .|++|+|.||+++..    ..+||+|||+++....  ...
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~----~~~kL~dfg~~~~~~~--~~~  155 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD----LTVKIGDYGLSHNKYK--EDY  155 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC----CcEEECCccccccccC--cce
Confidence            9999975321     11111       111          234667888888876    5699999999875321  111


Q ss_pred             cccccccCCCccccchhhhcCC-------CCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHc
Q 016850          232 SGKVNKIEGTRGYMAPEFQASG-------VVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ........|+..|+|||++.+.       .++.++||||||+++|||++ |+.||......        ....   ....
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--------~~~~---~~~~  224 (269)
T cd05087         156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE--------QVLT---YTVR  224 (269)
T ss_pred             eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH--------HHHH---HHhh
Confidence            1112335678899999988642       35789999999999999996 99999642211        0000   0000


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      .   .......+    ......++.+.+++.+|| .+|++|||+.||+..|.
T Consensus       225 ~---~~~~~~~~----~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         225 E---QQLKLPKP----RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             c---ccCCCCCC----ccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            0   00011111    111224567889999999 68999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=8.9e-34  Score=256.85  Aligned_cols=234  Identities=16%  Similarity=0.237  Sum_probs=174.5

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|+.  .++.+++|.......   ...+++.+|+.+++.++||||+++++++..++..++||||+++
T Consensus         7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~   86 (267)
T cd08229           7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA   86 (267)
T ss_pred             hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCC
Confidence            46689999999999997  478899987644322   2346788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcC----CCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          172 ANLADCLRN----PRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       172 gsL~~~l~~----~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ++|.+++..    ....++..+..+                 |.+|+|.||+++.+    ..++|+|||++.....    
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~----~~~~l~dfg~~~~~~~----  158 (267)
T cd08229          87 GDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT----GVVKLGDLGLGRFFSS----  158 (267)
T ss_pred             CCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC----CCEEECcchhhhcccc----
Confidence            999999863    222333332222                 23456999999876    5699999999876432    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .........|+..|+|||.+.+..++.++||||||+++|+|++|..||.....         ........ +        
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~-~--------  220 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---------NLYSLCKK-I--------  220 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---------hHHHHhhh-h--------
Confidence            11122345689999999999888899999999999999999999999853211         00010000 0        


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                        .........+..+++.+.+++.+||+.||.+|||+.+|++.+++++
T Consensus       221 --~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         221 --EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             --hcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence              0001111122346778999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=4.6e-34  Score=258.99  Aligned_cols=233  Identities=22%  Similarity=0.341  Sum_probs=169.7

Q ss_pred             ccccCCCceEEEEEECC--------ceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           99 KFTSSSASASWRGTIRG--------KDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~--------~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .||+|+||.||+|+..+        ..+++|...... ......+.+|+++++.++||||+++++++...+..++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999998753        467777654332 134667899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCC-------CCCccchHH-----------------HHHHhhhcceeecccCC-CccceEEccccccccc
Q 016850          170 SGANLADCLRNPR-------NPSFTVLST-----------------WLSRMQSSSIIVSEENA-GSLCAKICHFGTAELC  224 (381)
Q Consensus       170 ~~gsL~~~l~~~~-------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~-~~~~~kl~DFG~a~~~  224 (381)
                      ++|+|.+++....       ...+..+..                 +|.+|+|+||+++.++. ....++|+|||+++.+
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~  161 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI  161 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccc
Confidence            9999999997532       122222222                 23356699999987641 1236999999999764


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ...  ..........++..|+|||++.++.++.++|||||||++|||++ |+.||.....        .....    .  
T Consensus       162 ~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--------~~~~~----~--  225 (269)
T cd05044         162 YKS--DYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--------QEVLQ----H--  225 (269)
T ss_pred             ccc--cccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--------HHHHH----H--
Confidence            321  11111223456789999999998899999999999999999998 9999863211        01111    0  


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                               +........+..++..+.+++.+||..+|.+||++.+|++.|++
T Consensus       226 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         226 ---------VTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             ---------HhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence                     11111122334567789999999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.6e-34  Score=269.55  Aligned_cols=237  Identities=15%  Similarity=0.173  Sum_probs=171.7

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHH-HHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLS-VICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|...  ++.+|+|+......   .....+.+|.. +++.++||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            35899999999999884  78899998754322   22345566665 46778999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|..++..........+..+                 |++|+|+|||++++    +.+||+|||+++....    ....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~----~~~kL~DfG~~~~~~~----~~~~  152 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ----GHVVLTDFGLCKEGIA----QSDT  152 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC----CCEEEeecCCcccCCC----CCCC
Confidence            999999987665554443332                 33567899999876    5699999999875311    1122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......           .
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----------~~~~~~~~-----------~  210 (325)
T cd05604         153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----------AEMYDNIL-----------H  210 (325)
T ss_pred             cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----------HHHHHHHH-----------c
Confidence            3456799999999999998999999999999999999999999963211           11111111           1


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHH-HHHHHHHHHHhhhhhh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV-TGLVSKMYLESKNWAD  366 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev-l~~L~~~~~~~~~~~~  366 (381)
                      ..  ...++..+..+.+++.+||+.||.+||++.+. .+.++.-+.+...|..
T Consensus       211 ~~--~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~  261 (325)
T cd05604         211 KP--LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD  261 (325)
T ss_pred             CC--ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence            11  11122356788999999999999999998643 3444444444444443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=3.8e-35  Score=278.36  Aligned_cols=239  Identities=15%  Similarity=0.186  Sum_probs=168.4

Q ss_pred             hcCC-cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           92 TNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      .++| ..+.||+|+||.||+|++.  ++.+|+|+.....   ....+.+.+|+.+++.++||||+++++++.+++.+|+|
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv  121 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  121 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            3444 4567899999999999985  6788888864322   12345678899999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||++|+|.+++.... .+...+.                 .+|++|+|+|||++.+    +.+||+|||+++.+..  
T Consensus       122 ~Ey~~gg~L~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~----~~ikL~DfG~a~~~~~--  194 (371)
T cd05622         122 MEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS----GHLKLADFGTCMKMNK--  194 (371)
T ss_pred             EcCCCCCcHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCC----CCEEEEeCCceeEcCc--
Confidence            99999999999997643 3322221                 1234667899999876    5699999999986532  


Q ss_pred             CCccccccccCCCccccchhhhcCC----CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASG----VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                       .........+||+.|+|||++.+.    .++.++|||||||++|||++|+.||.....           ..........
T Consensus       195 -~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----------~~~~~~i~~~  262 (371)
T cd05622         195 -EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----------VGTYSKIMNH  262 (371)
T ss_pred             -CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----------HHHHHHHHcC
Confidence             111123456799999999998653    378999999999999999999999963211           1111111100


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCC---CCChHHHHHHHHHHHHHhh
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK---RPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~---RPs~~evl~~L~~~~~~~~  362 (381)
                               ...+.......++..+.++|.+||. +|..   |+++.++++   ..+.+..
T Consensus       263 ---------~~~~~~~~~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~---h~~~~~~  310 (371)
T cd05622         263 ---------KNSLTFPDDNDISKEAKNLICAFLT-DREVRLGRNGVEEIKR---HLFFKND  310 (371)
T ss_pred             ---------CCcccCCCcCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc---CcccCCC
Confidence                     0001111123467889999999998 5554   567766654   4444443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.7e-33  Score=257.62  Aligned_cols=235  Identities=18%  Similarity=0.265  Sum_probs=174.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||+||++...  ++.+++|+...... ...+.+.+|+++++.++||||+++++++.+.+.+++||||+++|+
T Consensus        10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   89 (284)
T cd06620          10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGS   89 (284)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCC
Confidence            467999999999999986  77888887654332 245788999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPRNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++..........+.                  ..|++|+|+||+++++    ..++|+|||++.....      ...
T Consensus        90 L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~----~~~~l~d~gl~~~~~~------~~~  159 (284)
T cd06620          90 LDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSR----GQIKLCDFGVSGELIN------SIA  159 (284)
T ss_pred             HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCC----CcEEEccCCcccchhh------hcc
Confidence            99998775544333221                  2334567999999876    5699999999865321      112


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....|+..|+|||++.+..++.++|||||||++|++++|+.||.................+.....+           ..
T Consensus       160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~  228 (284)
T cd06620         160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-----------QE  228 (284)
T ss_pred             CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-----------hc
Confidence            2457899999999998888999999999999999999999999754332211111111112111111           11


Q ss_pred             cccCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          316 RLKDSYP-VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       316 ~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      . ....+ ..++..+.+|+.+||+.||++||++.|+++.
T Consensus       229 ~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         229 P-PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             c-CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            1 11111 2356789999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.3e-34  Score=268.23  Aligned_cols=219  Identities=19%  Similarity=0.211  Sum_probs=166.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|...  ++.||+|+......   ...+.+..|..++..+ +|++|+++++++.+.+.+++||||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (323)
T cd05616           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (323)
T ss_pred             EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence            567999999999999986  56899998754322   2345567788888877 68999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..+                 |++|+|+|||++++    +.+||+|||+++....    ...
T Consensus        85 ~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~----~~~kL~DfG~~~~~~~----~~~  156 (323)
T cd05616          85 GGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE----GHIKIADFGMCKENMW----DGV  156 (323)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCC----CcEEEccCCCceecCC----CCC
Confidence            9999999987665554433322                 34667999999887    5699999999875321    112


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......        ....   ...           
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--------~~~~---~i~-----------  214 (323)
T cd05616         157 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--------ELFQ---SIM-----------  214 (323)
T ss_pred             ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--------HHHH---HHH-----------
Confidence            234567999999999999999999999999999999999999999642210        1111   111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM  347 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~  347 (381)
                      ..  ...++..++.++.+|+.+||+.||.+|+++
T Consensus       215 ~~--~~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         215 EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             hC--CCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            11  112344567889999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-33  Score=255.51  Aligned_cols=230  Identities=25%  Similarity=0.403  Sum_probs=172.0

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ..+.||+|+||.||+|.++ +..+++|.... .....+++.+|+.++++++|+||+++++++.+....++||||+++++|
T Consensus        10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   88 (261)
T cd05034          10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKP-GTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSL   88 (261)
T ss_pred             eeeeeccCcceEEEEEEEcCCceEEEEEecC-CccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCH
Confidence            3567899999999999986 46777777543 233567899999999999999999999999998999999999999999


Q ss_pred             HHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++....  .+....+..+                 |.+|+|.||+++++    ..+||+|||+++.+..   ......
T Consensus        89 ~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~----~~~~l~d~g~~~~~~~---~~~~~~  161 (261)
T cd05034          89 LDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGEN----LVCKIADFGLARLIED---DEYTAR  161 (261)
T ss_pred             HHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCC----CCEEECccccceeccc---hhhhhh
Confidence            99997653  2333332222                 23566999999887    5699999999976532   111111


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||.+.+..++.++||||||+++|++++ |+.||.....        ......    +           .
T Consensus       162 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~----~-----------~  218 (261)
T cd05034         162 EGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--------REVLEQ----V-----------E  218 (261)
T ss_pred             hccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH----H-----------H
Confidence            23335678999999988889999999999999999998 9999853211        011111    1           1


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      .......+...+..+.+++.+||+.||++||++.++++.|+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         219 RGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            111112223346789999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=2.7e-34  Score=269.98  Aligned_cols=236  Identities=22%  Similarity=0.312  Sum_probs=169.5

Q ss_pred             cccccccCCCceEEEEEE-------CCceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEe-CCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTI-------RGKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVS-GNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-------~~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~-~~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+       .++.||||+++..... ....+.+|+.+|.++ +|||||++++++.. +...++|
T Consensus        11 ~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv   90 (343)
T cd05103          11 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI   90 (343)
T ss_pred             ccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEE
Confidence            467899999999999974       2568999987543322 345688999999999 78999999998865 4567899


Q ss_pred             EeccCCCCHHHHhcCCCC--------------------------------------------------------------
Q 016850          166 YEHVSGANLADCLRNPRN--------------------------------------------------------------  183 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~--------------------------------------------------------------  183 (381)
                      ||||++|+|.+++.....                                                              
T Consensus        91 ~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
T cd05103          91 VEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQED  170 (343)
T ss_pred             EeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhh
Confidence            999999999999865321                                                              


Q ss_pred             -----CCcc-------chH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCC
Q 016850          184 -----PSFT-------VLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGT  241 (381)
Q Consensus       184 -----~~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt  241 (381)
                           ....       ++.          .+|++|+|.||+++++    ..+||+|||+++.+...  ..........++
T Consensus       171 ~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~----~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~  244 (343)
T cd05103         171 LYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEN----NVVKICDFGLARDIYKD--PDYVRKGDARLP  244 (343)
T ss_pred             hhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCC----CcEEEEecccccccccC--cchhhcCCCCCC
Confidence                 0000       111          1344677999999876    56999999999764221  111111223456


Q ss_pred             ccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCC
Q 016850          242 RGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDS  320 (381)
Q Consensus       242 ~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (381)
                      +.|+|||++.+..++.++||||||+++|+|++ |..||......           .......           .......
T Consensus       245 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----------~~~~~~~-----------~~~~~~~  302 (343)
T cd05103         245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-----------EEFCRRL-----------KEGTRMR  302 (343)
T ss_pred             cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-----------HHHHHHH-----------hccCCCC
Confidence            78999999988889999999999999999997 89888632110           0001111           1111111


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          321 YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      .+...++++.+++.+||+.||++||++.+|++.|+.++.
T Consensus       303 ~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         303 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            222345679999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=8.8e-34  Score=255.44  Aligned_cols=230  Identities=20%  Similarity=0.268  Sum_probs=171.1

Q ss_pred             cccccCCCceEEEEEECC---c--eEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIRG---K--DVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~---~--~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|.+..   +  .+++|....... ...+.+.+|+.++++++|||||++++++.+ ..+++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            358999999999998742   2  578887655444 356789999999999999999999999988 889999999999


Q ss_pred             CCHHHHhcCCC--CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+++....  ...+..+.                 .+|++|+|+||+++.+    ..+||+|||+++.+...... .
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~----~~~kl~dfg~~~~~~~~~~~-~  154 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASD----DKVKIGDFGLMRALPQNEDH-Y  154 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecC----CEEEeccccccccccccccc-e
Confidence            99999998754  23322222                 2344677999999887    56999999999876432111 1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......++..|+|||++.+..++.++|||||||++|||++ |+.||......        ........           
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~~~~-----------  215 (257)
T cd05040         155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--------QILKKIDK-----------  215 (257)
T ss_pred             ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHh-----------
Confidence            11223567889999999988889999999999999999998 99998532110        11111000           


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                         .......+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus       216 ---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         216 ---EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             ---cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence               00011122345678999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-34  Score=267.20  Aligned_cols=232  Identities=17%  Similarity=0.277  Sum_probs=171.0

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccc--cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRR--SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||.||.+.||++... .+-+|+|++....  .....-+.+|++.|.+| .|.+||+||+|-..++.+|+||||- ..
T Consensus       366 lk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~G-d~  444 (677)
T KOG0596|consen  366 LKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECG-DI  444 (677)
T ss_pred             HHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecc-cc
Confidence            467999999999999985 5667777654432  23567899999999999 5999999999988999999999998 58


Q ss_pred             CHHHHhcCCCCCC--------ccchHHHHHHhhhcceeecccCCCcc-----ceEEcccccccccccCCCCccccccccC
Q 016850          173 NLADCLRNPRNPS--------FTVLSTWLSRMQSSSIIVSEENAGSL-----CAKICHFGTAELCGEVSGNESGKVNKIE  239 (381)
Q Consensus       173 sL~~~l~~~~~~~--------~~~~~~~~~~l~~~Nill~~~~~~~~-----~~kl~DFG~a~~~~~~~~~~~~~~~~~~  239 (381)
                      +|..+|+......        +.+.+.++..||-+.|+|.+.++.|+     .+||+|||+|..+..  ..........+
T Consensus       445 DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~--DTTsI~kdsQv  522 (677)
T KOG0596|consen  445 DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQP--DTTSIVKDSQV  522 (677)
T ss_pred             cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCc--cccceeecccc
Confidence            9999998865433        34444555555555555555444333     489999999998743  23334556789


Q ss_pred             CCccccchhhhcCC-----------CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          240 GTRGYMAPEFQASG-----------VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       240 gt~~y~aPE~~~~~-----------~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                      ||+.||+||.+...           +.+.++||||||||||+|+.|+.||....          ...           ..
T Consensus       523 GT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~----------n~~-----------aK  581 (677)
T KOG0596|consen  523 GTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII----------NQI-----------AK  581 (677)
T ss_pred             CcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH----------HHH-----------HH
Confidence            99999999987421           26789999999999999999999996211          111           12


Q ss_pred             hhhhhcccccCCCCHHHH-HHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VRKWVDRRLKDSYPVEVA-EKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..+.++...-++|..-. .++.++++.||..||++||++.++|+
T Consensus       582 l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  582 LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            333444443333332211 23999999999999999999999975

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.3e-33  Score=257.70  Aligned_cols=235  Identities=17%  Similarity=0.252  Sum_probs=171.3

Q ss_pred             ccccccCCCceEEEEEECC------ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRG------KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|.+..      ..|++|+...... ...+.+.+|+.++++++||||+++++++.. +...++++||
T Consensus        11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~   90 (280)
T cd05043          11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPY   90 (280)
T ss_pred             eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEc
Confidence            4678999999999999853      6677776543322 245678899999999999999999998776 5678999999


Q ss_pred             cCCCCHHHHhcCCC--------CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          169 VSGANLADCLRNPR--------NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       169 ~~~gsL~~~l~~~~--------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      +++|+|.+++....        .+....+..                 +|++|+|+||+++++    ..+||+|||+++.
T Consensus        91 ~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~----~~~kl~d~g~~~~  166 (280)
T cd05043          91 MNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE----LQVKITDNALSRD  166 (280)
T ss_pred             CCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC----CcEEECCCCCccc
Confidence            99999999997642        223332222                 224566888888776    5699999999986


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHH
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      +...  ..........++..|+|||++.+..++.++|||||||++||+++ |+.||.....        .....    .+
T Consensus       167 ~~~~--~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~----~~  232 (280)
T cd05043         167 LFPM--DYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--------FEMAA----YL  232 (280)
T ss_pred             ccCC--ceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------HHHHH----HH
Confidence            4321  11111223456778999999988889999999999999999999 9999863211        01111    11


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                                 ........+..+++.+.+++.+||..||++||++.++++.|+++..+
T Consensus       233 -----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         233 -----------KDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             -----------HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence                       11111112233567899999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.4e-33  Score=261.23  Aligned_cols=242  Identities=17%  Similarity=0.253  Sum_probs=169.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||++.+.  +..+++|........ ...++.+|++++++++||||+++++++.+++.+++||||+++|
T Consensus         5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~   84 (308)
T cd06615           5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   84 (308)
T ss_pred             EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence            3567999999999999985  566677765443222 3466889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH------------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW------------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~------------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++......+...+..+                  |++|+|.||+++++    +.+||+|||++.....      ..
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~------~~  154 (308)
T cd06615          85 SLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR----GEIKLCDFGVSGQLID------SM  154 (308)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC----CcEEEccCCCcccccc------cc
Confidence            99999987655544433222                  23456888888776    5699999999875421      12


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC----------
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG----------  304 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------  304 (381)
                      .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||.........     ............          
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~  229 (308)
T cd06615         155 ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-----AMFGRPVSEGEAKESHRPVSGH  229 (308)
T ss_pred             cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-----HhhcCccccccccCCcccccCC
Confidence            23467899999999998888999999999999999999999998632211100     000000000000          


Q ss_pred             -----Cccc---hhhhhcccccCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 -----GVGG---VRKWVDRRLKDSYP-VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 -----~~~~---~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ....   +.+.......+..+ ..++.++.+|+.+||..||++||++.+|++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  286 (308)
T cd06615         230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK  286 (308)
T ss_pred             CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                 0000   00000000011111 125667999999999999999999999865

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=9.2e-34  Score=257.03  Aligned_cols=236  Identities=17%  Similarity=0.211  Sum_probs=172.2

Q ss_pred             HHHhcCCc-ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           89 CAATNNFL-AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        89 ~~~~~~f~-~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      +.+++++. ...||+|+||.||+|++.  +..|++|..........+.+.+|+.++++++|+||+++++++..++..++|
T Consensus         4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   83 (268)
T cd06624           4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF   83 (268)
T ss_pred             ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence            34455553 346799999999999875  567888876655555667899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCC-CC--CccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          166 YEHVSGANLADCLRNPR-NP--SFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~-~~--~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      |||+++++|.+++.... ..  ....+..                 +|++|+|.||+++...   ..++|+|||++....
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~---~~~~l~dfg~~~~~~  160 (268)
T cd06624          84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYS---GVVKISDFGTSKRLA  160 (268)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC---CeEEEecchhheecc
Confidence            99999999999997642 22  2222221                 2235668899987532   469999999987642


Q ss_pred             cCCCCccccccccCCCccccchhhhcCCC--CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      .    .........|++.|+|||++.+..  ++.++||||||+++|+|++|+.||.......         ......   
T Consensus       161 ~----~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~---------~~~~~~---  224 (268)
T cd06624         161 G----INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ---------AAMFKV---  224 (268)
T ss_pred             c----CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh---------hhHhhh---
Confidence            2    111223345899999999886543  7899999999999999999999986322100         000000   


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                               ......+..+..+.+++.+++.+||+.+|.+||++.++++
T Consensus       225 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         225 ---------GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             ---------hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence                     0001122334556778999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1e-33  Score=257.02  Aligned_cols=235  Identities=20%  Similarity=0.273  Sum_probs=172.6

Q ss_pred             cccccccCCCceEEEEEECC-----ceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRG-----KDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-----~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|.+.+     ..|++|...... ....+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~   88 (270)
T cd05056          10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELA   88 (270)
T ss_pred             eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcC
Confidence            35678999999999998742     357777765443 2345689999999999999999999999876 4578999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..                 +|.+|+|+||+++..    ..+||+|||+++.....   .
T Consensus        89 ~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~----~~~~l~d~g~~~~~~~~---~  161 (270)
T cd05056          89 PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSP----DCVKLGDFGLSRYLEDE---S  161 (270)
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecC----CCeEEccCceeeecccc---c
Confidence            9999999997643 234333222                 233567999999876    56999999999765321   1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........++..|+|||.+....++.++||||||+++||+++ |..||......        .....   ..        
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~---~~--------  222 (270)
T cd05056         162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--------DVIGR---IE--------  222 (270)
T ss_pred             ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHH---HH--------
Confidence            111122335578999999888889999999999999999986 99998643211        11111   00        


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                          .......+..++..+.+++.+||..+|.+||++.++++.|+++..+.
T Consensus       223 ----~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~  269 (270)
T cd05056         223 ----NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE  269 (270)
T ss_pred             ----cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence                11111223455678999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=6.6e-34  Score=260.98  Aligned_cols=239  Identities=15%  Similarity=0.223  Sum_probs=163.9

Q ss_pred             cccccccCCCceEEEEEEC---CceEEEEEecccccc--cHHHHHHHHHHHhhc---CCCCcceEEEEEE-----eCCee
Q 016850           96 LAKKFTSSSASASWRGTIR---GKDVIIFQRKLRRSL--DLEQLRERLSVICRS---HHSSLIKLLGACV-----SGNCG  162 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l---~h~nIv~l~~~~~-----~~~~~  162 (381)
                      ..+.||+|+||.||+|+..   ++.||+|+.......  ....+.+|+.+++.+   +||||+++++++.     ....+
T Consensus         5 ~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~   84 (290)
T cd07862           5 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   84 (290)
T ss_pred             eeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcE
Confidence            3567999999999999873   567888876544322  245667788887776   6999999999985     24568


Q ss_pred             eEEEeccCCCCHHHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          163 YLVYEHVSGANLADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       163 ~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++||||++ ++|.+++....  ..+...+..                 +|++|+|+|||++.+    +.+||+|||+++.
T Consensus        85 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~----~~~kl~Dfg~~~~  159 (290)
T cd07862          85 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS----GQIKLADFGLARI  159 (290)
T ss_pred             EEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCC----CCEEEccccceEe
Confidence            99999995 79999987543  233222222                 234677999999876    5699999999976


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ...     ........||+.|+|||++.+..++.++|||||||++|||++|++||......        ...........
T Consensus       160 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~--------~~~~~i~~~~~  226 (290)
T cd07862         160 YSF-----QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--------DQLGKILDVIG  226 (290)
T ss_pred             ccC-----CcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH--------HHHHHHHHHhC
Confidence            432     12234567899999999998888999999999999999999999999743221        11111111000


Q ss_pred             -CCccchhh-------hhcccccC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 -GGVGGVRK-------WVDRRLKD---SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 -~~~~~~~~-------~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .....+..       .+......   ...+.+++.+.+|+.+||+.||++|||+.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         227 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             00000000       00000000   011234567899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.6e-33  Score=259.13  Aligned_cols=238  Identities=20%  Similarity=0.269  Sum_probs=171.9

Q ss_pred             cccccccCCCceEEEEEECC------------------ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEE
Q 016850           96 LAKKFTSSSASASWRGTIRG------------------KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGAC  156 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~------------------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~  156 (381)
                      ..+.||+|+||.||+|.+.+                  ..|++|....... ...+.+.+|++++++++||||+++++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   88 (296)
T cd05051           9 FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVC   88 (296)
T ss_pred             ccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            35789999999999998743                  3477777654332 2467789999999999999999999999


Q ss_pred             EeCCeeeEEEeccCCCCHHHHhcCCC-----------CCCccchHH-----------------HHHHhhhcceeecccCC
Q 016850          157 VSGNCGYLVYEHVSGANLADCLRNPR-----------NPSFTVLST-----------------WLSRMQSSSIIVSEENA  208 (381)
Q Consensus       157 ~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~  208 (381)
                      .+++..++||||+++++|.++|....           ...+..+..                 .|++|+|+||+++++  
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~--  166 (296)
T cd05051          89 TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKN--  166 (296)
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCC--
Confidence            99999999999999999999997654           233333222                 234677999999887  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh--CCccccccccCCc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS--GEEVLKFVFDEGI  286 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt--g~~pf~~~~~~~~  286 (381)
                        ..++|+|||+++.....  ..........+++.|+|||++.+..++.++|||||||++|||++  |..||.....   
T Consensus       167 --~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~---  239 (296)
T cd05051         167 --YTIKIADFGMSRNLYSS--DYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD---  239 (296)
T ss_pred             --CceEEccccceeecccC--cceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh---
Confidence              56999999998764321  11112234556789999999988889999999999999999998  6677642211   


Q ss_pred             ccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                           .............        .........+..++.++.+++.+||+.||.+||++.+|++.|+
T Consensus       240 -----~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         240 -----QQVIENAGHFFRD--------DGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             -----HHHHHHHHhcccc--------ccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence                 1111111111000        0011111123345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=249.32  Aligned_cols=239  Identities=13%  Similarity=0.155  Sum_probs=181.4

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~e~  168 (381)
                      ..+.||+|||+.||+++.  .++.+|+|++......+.+..++|++..++++||||++++++...+     ...||+++|
T Consensus        25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Py  104 (302)
T KOG2345|consen   25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPY  104 (302)
T ss_pred             EeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence            356799999999999985  5889999999888877889999999999999999999999987643     348999999


Q ss_pred             cCCCCHHHHhcCCC----CCCccchH-------------------HHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          169 VSGANLADCLRNPR----NPSFTVLS-------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       169 ~~~gsL~~~l~~~~----~~~~~~~~-------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      ...|+|.+.+....    ..++.+++                   .+|+||||+|||+.+.    +.++|.|||.+....
T Consensus       105 y~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~----~~~vl~D~GS~~~a~  180 (302)
T KOG2345|consen  105 YKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDS----GLPVLMDLGSATQAP  180 (302)
T ss_pred             hccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCC----CceEEEeccCccccc
Confidence            99999999997643    23333333                   3456888999999996    569999999987643


Q ss_pred             cCCCCcc-----ccccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          226 EVSGNES-----GKVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       226 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      ....+..     +......-|..|+|||.+.   +...+.++|||||||++|.|+.|..||+.....+....        
T Consensus       181 i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla--------  252 (302)
T KOG2345|consen  181 IQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA--------  252 (302)
T ss_pred             eEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE--------
Confidence            2211111     1122344689999999886   34578999999999999999999999975444322110        


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                                  .......+.-+....+++.+.+||+.||+.||.+||++.+++..++.+.
T Consensus       253 ------------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  253 ------------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             ------------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence                        0111112221122237889999999999999999999999999988763

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=5.5e-34  Score=265.85  Aligned_cols=219  Identities=19%  Similarity=0.194  Sum_probs=166.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCC-CCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHH-SSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|...  ++.||+|+.....   ....+.+..|++++..+.| ++|+++++++.+.+.+|+||||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   84 (324)
T cd05587           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN   84 (324)
T ss_pred             EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence            567999999999999986  5689999875432   2345678889999999966 568899999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.......+..+..+                 |++|+|+|||++.+    +.+||+|||+++....    ...
T Consensus        85 ~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~----~~~kL~Dfg~~~~~~~----~~~  156 (324)
T cd05587          85 GGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAE----GHIKIADFGMCKENIF----GGK  156 (324)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCC----CCEEEeecCcceecCC----CCC
Confidence            9999999987665554433322                 33567899999876    5699999999864311    112


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||......        ....   ...           
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~---~i~-----------  214 (324)
T cd05587         157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQ---SIM-----------  214 (324)
T ss_pred             ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHH---HHH-----------
Confidence            234567999999999999888999999999999999999999999632210        1111   111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM  347 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~  347 (381)
                      .  ....++..+++.+.+++.+||+.||.+|+++
T Consensus       215 ~--~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         215 E--HNVSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             c--CCCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            0  1122344566789999999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=4e-34  Score=257.36  Aligned_cols=224  Identities=25%  Similarity=0.364  Sum_probs=169.1

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      ..+.||+|+||.||+|...++.+++|+....  ...+.+.+|+.++++++||||+++++++..+ ..++||||+++|+|.
T Consensus        10 ~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~   86 (254)
T cd05083          10 LGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLV   86 (254)
T ss_pred             eeeeeccCCCCceEecccCCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHH
Confidence            4577899999999999999999999986432  2456789999999999999999999998765 479999999999999


Q ss_pred             HHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++.....  .+...+..                 +|++|+|.||+++.+    +.+||+|||++......       ..
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~----~~~kl~Dfg~~~~~~~~-------~~  155 (254)
T cd05083          87 NFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSED----GVAKVSDFGLARVGSMG-------VD  155 (254)
T ss_pred             HHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC----CcEEECCCccceecccc-------CC
Confidence            99976432  23322221                 234667999999876    56999999998753211       11


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....+..|+|||++.++.++.++|||||||++|||++ |+.||.....           .+. ...           +..
T Consensus       156 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----------~~~-~~~-----------~~~  212 (254)
T cd05083         156 NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----------KEV-KEC-----------VEK  212 (254)
T ss_pred             CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----------HHH-HHH-----------HhC
Confidence            2334678999999988889999999999999999998 9999863211           011 111           111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ......+..+++.+.+++.+||+.+|++||++.++++.|++
T Consensus       213 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         213 GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            11222233456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.7e-33  Score=257.53  Aligned_cols=245  Identities=18%  Similarity=0.213  Sum_probs=171.3

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|.+      .+..|++|+.........+.+.+|++++++++||||+++++++..  ...+++||||
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   88 (284)
T cd05081           9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY   88 (284)
T ss_pred             eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence            46799999999999985      267899998765544456788999999999999999999998754  4568999999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++.... ......+..                 .|++|+|+||+++++    ..+||+|||+++.+..... 
T Consensus        89 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~----~~~~l~dfg~~~~~~~~~~-  163 (284)
T cd05081          89 LPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESE----NRVKIGDFGLTKVLPQDKE-  163 (284)
T ss_pred             cCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCC----CeEEECCCcccccccCCCc-
Confidence            99999999997643 233333222                 233567999999876    5699999999987532111 


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCc---ccc-cchhHHHHHHHHHcCCc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI---DGY-RRVSVVDKASEAVAGGV  306 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~  306 (381)
                      .........++..|+|||++.+..++.++|||||||++|||++|..++......-.   ... ........         
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  234 (284)
T cd05081         164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH---------  234 (284)
T ss_pred             ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH---------
Confidence            11111222345679999999888899999999999999999998776542211000   000 00000000         


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                        +.+.+........+..++..+.+|+.+||..+|++|||+.+|++.|+.+
T Consensus       235 --~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         235 --LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             --HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence              1111111112222344567899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=3.8e-34  Score=260.89  Aligned_cols=223  Identities=19%  Similarity=0.305  Sum_probs=168.8

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      +.||+|+||.||+|.+.  +..||+|....... ...+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSA   89 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcH
Confidence            56899999999999874  67788887654332 2456789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++.... .....+..                 .|.+|+|+||+++++    +.++|+|||++..+..    .......
T Consensus        90 ~~~~~~~~-~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~----~~~~l~dfg~~~~~~~----~~~~~~~  160 (277)
T cd06642          90 LDLLKPGP-LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ----GDVKLADFGVAGQLTD----TQIKRNT  160 (277)
T ss_pred             HHHhhcCC-CCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC----CCEEEccccccccccC----cchhhhc
Confidence            99987542 23222222                 233566999999876    5699999999976532    1122234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ..|+..|+|||++.+..++.++|||||||++|||++|+.||......        ....               .+....
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~---------------~~~~~~  217 (277)
T cd06642         161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLF---------------LIPKNS  217 (277)
T ss_pred             ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHh---------------hhhcCC
Confidence            56899999999999888999999999999999999999998632211        0000               011111


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..++..+.+++.+||+.+|++||++.++++
T Consensus       218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            12223345678999999999999999999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.2e-33  Score=254.27  Aligned_cols=229  Identities=19%  Similarity=0.283  Sum_probs=172.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc---------HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD---------LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~---------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ...||+|+||.||+|...  ++.+++|.........         .+.+.+|++++++++||||+++++++.+.+..++|
T Consensus         5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (267)
T cd06628           5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF   84 (267)
T ss_pred             cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence            567899999999999874  6889998765443221         25688999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+++++|.+++......+...+..                 +|.+|+|+||+++++    ..++|+|||+++.+....
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~----~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          85 LEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNK----GGIKISDFGISKKLEANS  160 (267)
T ss_pred             EEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCC----CCEEecccCCCccccccc
Confidence            99999999999998765554433322                 234567999999876    569999999998754211


Q ss_pred             CC--ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          229 GN--ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       229 ~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                      ..  .........|+..|+|||.+.+..++.++|||||||++|+|++|+.||.....           ........    
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~----  225 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-----------LQAIFKIG----  225 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-----------HHHHHHHh----
Confidence            11  11112345688999999999888899999999999999999999999963211           01000000    


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ....+..+..++..+.+++.+||+.||.+||++.++++
T Consensus       226 --------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         226 --------ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             --------ccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                    01122334456778999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-35  Score=251.89  Aligned_cols=243  Identities=18%  Similarity=0.218  Sum_probs=185.1

Q ss_pred             CCCceeeHHHHHHHhcCCcccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEE
Q 016850           78 ENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLL  153 (381)
Q Consensus        78 ~~~~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~  153 (381)
                      ...+.|+-++++..      ..||.|+||+|+|-.++  |+..|||+++..... +.+++..|.++.++- +.||||++|
T Consensus        56 ~~~~~F~~~~Lqdl------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfy  129 (361)
T KOG1006|consen   56 AHLHTFTSDNLQDL------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFY  129 (361)
T ss_pred             ccccccccchHHHH------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHh
Confidence            34556776666533      56999999999999986  889999998776653 567888999876655 799999999


Q ss_pred             EEEEeCCeeeEEEeccCCCCHHHHhcC-----CCCCC------------------ccchHHHHHHhhhcceeecccCCCc
Q 016850          154 GACVSGNCGYLVYEHVSGANLADCLRN-----PRNPS------------------FTVLSTWLSRMQSSSIIVSEENAGS  210 (381)
Q Consensus       154 ~~~~~~~~~~lv~e~~~~gsL~~~l~~-----~~~~~------------------~~~~~~~~~~l~~~Nill~~~~~~~  210 (381)
                      |.+..++..||.||+| .-+|+.+-+.     ....+                  ...+.++|+|+||+|||++..    
T Consensus       130 Ga~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~----  204 (361)
T KOG1006|consen  130 GALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRH----  204 (361)
T ss_pred             hhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecC----
Confidence            9999999999999999 4788765432     11111                  123457889999999999998    


Q ss_pred             cceEEcccccccccccCCCCccccccccCCCccccchhhhc--CCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc
Q 016850          211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQA--SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG  288 (381)
Q Consensus       211 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~  288 (381)
                      +.+||||||++-.+.     .+...+...|...|||||.+.  +..|+.++|||||||+|||+.||+.|+..        
T Consensus       205 G~vKLCDFGIcGqLv-----~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~--------  271 (361)
T KOG1006|consen  205 GDVKLCDFGICGQLV-----DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK--------  271 (361)
T ss_pred             CCEeeecccchHhHH-----HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch--------
Confidence            559999999987652     223345567999999999875  34599999999999999999999999873        


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                        +.++.+++.+.+.+....+.       ......+.+..+..+|..||.+|-..||...++.+.
T Consensus       272 --w~svfeql~~Vv~gdpp~l~-------~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  272 --WDSVFEQLCQVVIGDPPILL-------FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             --HHHHHHHHHHHHcCCCCeec-------CcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence              34567777666655322111       111123577889999999999999999999998653

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=2.4e-34  Score=278.48  Aligned_cols=236  Identities=14%  Similarity=0.177  Sum_probs=160.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG--------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--------~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||||++...    .....+|+.+|++++|||||++++++...        ..+++|
T Consensus        70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv  145 (440)
T PTZ00036         70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV  145 (440)
T ss_pred             EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence            4567999999999999984  678999976432    23356799999999999999999987532        246799


Q ss_pred             EeccCCCCHHHHhcC----CCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          166 YEHVSGANLADCLRN----PRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~----~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      |||++ ++|.+++..    ....+...+.                 .+|++|||+|||++..+   ..+||+|||+++.+
T Consensus       146 mE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~---~~vkL~DFGla~~~  221 (440)
T PTZ00036        146 MEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT---HTLKLCDFGSAKNL  221 (440)
T ss_pred             EecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC---Cceeeeccccchhc
Confidence            99996 688777653    2233322221                 23446779999987653   46999999999865


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..     ........||+.|+|||++.+. .++.++|||||||++|||++|.+||......        ...........
T Consensus       222 ~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~  288 (440)
T PTZ00036        222 LA-----GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV--------DQLVRIIQVLG  288 (440)
T ss_pred             cC-----CCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhC
Confidence            32     1122345789999999988764 6899999999999999999999999643211        01111111000


Q ss_pred             CC--------ccchh-----hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GG--------VGGVR-----KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~--------~~~~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..        ...+.     ......+...++...++++.+||.+||+.||.+|||+.|+++
T Consensus       289 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        289 TPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             CCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence            00        00000     000111111223345678999999999999999999999863

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=8.4e-34  Score=255.40  Aligned_cols=227  Identities=21%  Similarity=0.315  Sum_probs=169.2

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+. ++.+++|.... ......++.+|++++++++||||+++++++......++||||+++|+|.
T Consensus         9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   87 (256)
T cd05112           9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIRE-GAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS   87 (256)
T ss_pred             EeeecCcccceEEEEEEeCCCeEEEEECCC-CCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence            467999999999999886 77888887543 2334578999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ......+..                 .|.+|+|+||+++.+    ..+||+|||+++.....   .......
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~----~~~~l~d~g~~~~~~~~---~~~~~~~  160 (256)
T cd05112          88 DYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGEN----QVVKVSDFGMTRFVLDD---QYTSSTG  160 (256)
T ss_pred             HHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCC----CeEEECCCcceeecccC---cccccCC
Confidence            9997643 233333222                 234567999999876    56999999998764321   1111223


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||++.++.++.++||||||+++|||++ |+.||......        ...+.    +           ...
T Consensus       161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--------~~~~~----~-----------~~~  217 (256)
T cd05112         161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--------EVVET----I-----------NAG  217 (256)
T ss_pred             CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--------HHHHH----H-----------hCC
Confidence            345678999999988889999999999999999998 99998532110        11111    0           000


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      .....+...+..+.+|+.+||+.+|++||++.++++.|
T Consensus       218 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         218 FRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            11111222457899999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=6.3e-34  Score=265.27  Aligned_cols=239  Identities=17%  Similarity=0.203  Sum_probs=174.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|...  ++.||+|+.....   ....+.+..|+.++..+. |++|+++++++.+.+.+|+||||++
T Consensus         5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~   84 (323)
T cd05615           5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN   84 (323)
T ss_pred             EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence            467899999999999885  7789999875432   223456788999998885 6788899999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.......+.++..+                 |++|+|+|||++.+    +.+||+|||+++....    ...
T Consensus        85 ~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~----~~ikL~Dfg~~~~~~~----~~~  156 (323)
T cd05615          85 GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSE----GHIKIADFGMCKEHMV----DGV  156 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC----CCEEEeccccccccCC----CCc
Confidence            9999999987665554443332                 34567999999876    5699999999875321    111


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....        .....   ...           
T Consensus       157 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~---~i~-----------  214 (323)
T cd05615         157 TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQ---SIM-----------  214 (323)
T ss_pred             cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHH---HHH-----------
Confidence            23346699999999999988899999999999999999999999964211        01111   111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH--HHHHHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ--VTGLVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e--vl~~L~~~~~~~~~~~~~  367 (381)
                      ..  ...++..++..+.+++.+||+.||.+|++..+  .-+.++.-+.+..+|...
T Consensus       215 ~~--~~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~  268 (323)
T cd05615         215 EH--NVSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKL  268 (323)
T ss_pred             hC--CCCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHH
Confidence            11  11234456678999999999999999998642  122233434444555443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.7e-33  Score=255.07  Aligned_cols=234  Identities=18%  Similarity=0.313  Sum_probs=174.9

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccc------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|..  .++.+++|+.......      ..+.+.+|++++++++|+||+++++++.+.+.+++||||
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~   84 (268)
T cd06630           5 GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEW   84 (268)
T ss_pred             cceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEec
Confidence            46789999999999987  4788999987543321      246788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +++++|.+++.......+..+..++.                 +|+|.||+++..+   ..+||+|||++..........
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~---~~~~l~dfg~~~~~~~~~~~~  161 (268)
T cd06630          85 MAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG---QRLRIADFGAAARLAAKGTGA  161 (268)
T ss_pred             cCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC---CEEEEcccccccccccccccC
Confidence            99999999998766555444443332                 4558888886543   359999999987754321111


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........|+..|+|||++.+..++.++||||+|+++++|++|+.||......        .......           .
T Consensus       162 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~-----------~  222 (268)
T cd06630         162 GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--------NHLALIF-----------K  222 (268)
T ss_pred             CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--------chHHHHH-----------H
Confidence            12223456899999999998888999999999999999999999998532110        0001000           1


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+...++.+.+++.+||+.||.+||++.++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         223 IASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            11111223445567789999999999999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-33  Score=260.39  Aligned_cols=237  Identities=19%  Similarity=0.246  Sum_probs=167.6

Q ss_pred             ccccccCCCceEEEEEECC----------------ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC
Q 016850           97 AKKFTSSSASASWRGTIRG----------------KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSG  159 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~----------------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~  159 (381)
                      .+.||+|+||.||++...+                ..|++|+...... ...+.+.+|+++|++++|+||+++++++...
T Consensus        10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   89 (295)
T cd05097          10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD   89 (295)
T ss_pred             hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence            4679999999999998642                2477777654322 2356789999999999999999999999999


Q ss_pred             CeeeEEEeccCCCCHHHHhcCCCC------------CCccchH-----------------HHHHHhhhcceeecccCCCc
Q 016850          160 NCGYLVYEHVSGANLADCLRNPRN------------PSFTVLS-----------------TWLSRMQSSSIIVSEENAGS  210 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~  210 (381)
                      +..++||||+++++|.+++.....            .....+.                 ..|.+|+|+||+++++    
T Consensus        90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~----  165 (295)
T cd05097          90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNH----  165 (295)
T ss_pred             CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCC----
Confidence            999999999999999999865321            1111111                 1244677999999876    


Q ss_pred             cceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh--CCccccccccCCccc
Q 016850          211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS--GEEVLKFVFDEGIDG  288 (381)
Q Consensus       211 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt--g~~pf~~~~~~~~~~  288 (381)
                      ..+||+|||++..+...  ..........++..|+|||++.++.++.++|||||||++|+|++  |..||......    
T Consensus       166 ~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~----  239 (295)
T cd05097         166 YTIKIADFGMSRNLYSG--DYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE----  239 (295)
T ss_pred             CcEEecccccccccccC--cceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH----
Confidence            56999999999764321  11111223445789999999988889999999999999999998  55666532111    


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                          ............        .........+..+++.+.+|+.+||+.||++||++.+|++.|+
T Consensus       240 ----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         240 ----QVIENTGEFFRN--------QGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             ----HHHHHHHHhhhh--------ccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence                111111111000        0000111112234578999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=258.39  Aligned_cols=239  Identities=16%  Similarity=0.203  Sum_probs=173.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||++...  ++.||+|+......   .....+.+|+.++++++||||+++++++.+++.+++||||+++
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05605           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG   84 (285)
T ss_pred             EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence            467899999999999984  78899988654321   2345678899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+++....  ..+...+..+                 |++|+|.||++++.    ..++|+|||++.....     .
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~~l~Dfg~~~~~~~-----~  155 (285)
T cd05605          85 GDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDY----GHIRISDLGLAVEIPE-----G  155 (285)
T ss_pred             CcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCC----CCEEEeeCCCceecCC-----C
Confidence            99999886532  2333332221                 23566899999876    5699999999876421     1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......|++.|+|||++.+..++.++|||||||++|||++|+.||......        .........+          
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--------~~~~~~~~~~----------  217 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--------VKREEVERRV----------  217 (285)
T ss_pred             CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh--------hHHHHHHHHh----------
Confidence            1223457899999999998888999999999999999999999999642211        0111111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                       .. ....++..+++.+.+|+.+||+.||++||     ++.++++   .-+....+|..+
T Consensus       218 -~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~---~~~~~~~~~~~~  272 (285)
T cd05605         218 -KE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA---HPFFRTANFKRL  272 (285)
T ss_pred             -hh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc---CcCccCCCHHHH
Confidence             00 11223445677899999999999999999     6667643   333444445433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=7e-34  Score=261.72  Aligned_cols=238  Identities=17%  Similarity=0.240  Sum_probs=167.1

Q ss_pred             cccccccCCCceEEEEEEC------------------CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEE
Q 016850           96 LAKKFTSSSASASWRGTIR------------------GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGAC  156 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~------------------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~  156 (381)
                      ..+.||+|+||.||++.+.                  ...+++|+...... ...+++.+|+++|++++|+||+++++++
T Consensus         9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~   88 (296)
T cd05095           9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVC   88 (296)
T ss_pred             eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            3567999999999998643                  23577777654322 2456799999999999999999999999


Q ss_pred             EeCCeeeEEEeccCCCCHHHHhcCCCCCC-----------ccchH-----------------HHHHHhhhcceeecccCC
Q 016850          157 VSGNCGYLVYEHVSGANLADCLRNPRNPS-----------FTVLS-----------------TWLSRMQSSSIIVSEENA  208 (381)
Q Consensus       157 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~~~-----------------~~~~~l~~~Nill~~~~~  208 (381)
                      .+.+..++||||+++|+|.+++.......           +..+.                 ..|.+|+|+||+++++  
T Consensus        89 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~--  166 (296)
T cd05095          89 ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN--  166 (296)
T ss_pred             ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCC--
Confidence            99999999999999999999997643221           11111                 1234567889888775  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh--CCccccccccCCc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS--GEEVLKFVFDEGI  286 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt--g~~pf~~~~~~~~  286 (381)
                        ..++|+|||+++.+...  ..........+++.|+|||...++.++.++|||||||++|||++  |..||......  
T Consensus       167 --~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~--  240 (296)
T cd05095         167 --YTIKIADFGMSRNLYSG--DYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE--  240 (296)
T ss_pred             --CCEEeccCcccccccCC--cceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH--
Confidence              56999999999764221  11111222345678999998888889999999999999999998  66777532111  


Q ss_pred             ccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                            ............        .........+..+++.+.+|+.+||+.||.+||++.+|++.|+
T Consensus       241 ------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         241 ------QVIENTGEFFRD--------QGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             ------HHHHHHHHHHhh--------ccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence                  111111010000        0000011112345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=4.3e-34  Score=271.58  Aligned_cols=240  Identities=19%  Similarity=0.257  Sum_probs=168.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC-----eeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGN-----CGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~~lv~e  167 (381)
                      .+.||+|+||.||+|...  ++.||+|+......  ...+++.+|+++|+.++||||+++++++...+     ..|+|||
T Consensus         5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e   84 (372)
T cd07853           5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE   84 (372)
T ss_pred             cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence            567999999999999974  78899998643322  24567889999999999999999999998776     7899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+. ++|.+++..........+..+                 |++|+|+|||++.+    +.+||+|||+++....   .
T Consensus        85 ~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~----~~~kL~Dfg~a~~~~~---~  156 (372)
T cd07853          85 LMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN----CVLKICDFGLARVEEP---D  156 (372)
T ss_pred             ccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC----CCEEeccccceeeccc---C
Confidence            995 789998877665554433322                 33567899999876    5699999999986432   1


Q ss_pred             ccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc---
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV---  306 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  306 (381)
                      .........+++.|+|||++.+. .++.++|||||||++|||++|+.||......        .....+........   
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~g~~~~~~  228 (372)
T cd07853         157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--------QQLDLITDLLGTPSLEA  228 (372)
T ss_pred             ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHHcCCCCHHH
Confidence            12223345689999999998764 4789999999999999999999999643211        01111100000000   


Q ss_pred             -----cchhhhh-cccccC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 -----GGVRKWV-DRRLKD-------SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 -----~~~~~~~-~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ......+ ......       ......++++.+|+.+||+.||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                 0000000 000000       111233678999999999999999999999865

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.3e-34  Score=289.41  Aligned_cols=229  Identities=17%  Similarity=0.219  Sum_probs=165.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+||+|.+.  +..+++|.+.....  .....+.+|+.+|++|+|||||+++++|.+  .+.+||||||+
T Consensus        17 Il~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~   96 (1021)
T PTZ00266         17 VIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFC   96 (1021)
T ss_pred             EEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCC
Confidence            4578999999999999985  56777877654322  245678999999999999999999998864  45789999999


Q ss_pred             CCCCHHHHhcCC----CCCCccchH------------------------HHHHHhhhcceeecccC-------------C
Q 016850          170 SGANLADCLRNP----RNPSFTVLS------------------------TWLSRMQSSSIIVSEEN-------------A  208 (381)
Q Consensus       170 ~~gsL~~~l~~~----~~~~~~~~~------------------------~~~~~l~~~Nill~~~~-------------~  208 (381)
                      ++|+|.++|...    ..+++..+.                        .+|++|+|.|||++...             .
T Consensus        97 ~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n  176 (1021)
T PTZ00266         97 DAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN  176 (1021)
T ss_pred             CCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence            999999998652    223322211                        34557889999996521             1


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI  286 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~  286 (381)
                      ....+||+|||++..+..     ........||+.|+|||++.+  ..++.++||||||||+|||++|+.||.....   
T Consensus       177 g~~iVKLsDFGlAr~l~~-----~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~---  248 (1021)
T PTZ00266        177 GRPIAKIGDFGLSKNIGI-----ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN---  248 (1021)
T ss_pred             CCCceEEccCCccccccc-----cccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc---
Confidence            224589999999976532     112234679999999998864  4588999999999999999999999963211   


Q ss_pred             ccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              .......+...         +.+   .....+..+.+||.+||+.+|.+||++.+++.
T Consensus       249 --------~~qli~~lk~~---------p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        249 --------FSQLISELKRG---------PDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             --------HHHHHHHHhcC---------CCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence                    11111111000         000   01234678999999999999999999999974

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=5.8e-34  Score=258.50  Aligned_cols=232  Identities=18%  Similarity=0.200  Sum_probs=160.8

Q ss_pred             ccccCCCceEEEEEEC----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||+|...    ...+++|....... .....+.+|+++++.++||||+++++.+...+.+++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            5899999999999763    23566665433222 234568899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCC-----CccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          174 LADCLRNPRNP-----SFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       174 L~~~l~~~~~~-----~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      |.++|......     ....+.                 .+|++|+|.||+++++    ..+||+|||++......  ..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~----~~~kl~dfg~~~~~~~~--~~  155 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD----LSVKIGDYGLALEQYPE--DY  155 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC----CcEEEeccccccccccc--hh
Confidence            99999764321     111111                 2345677999999887    56999999998653211  11


Q ss_pred             cccccccCCCccccchhhhcC-------CCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHc
Q 016850          232 SGKVNKIEGTRGYMAPEFQAS-------GVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ........+++.|+|||++..       ..++.++|||||||++|||++ |..||.....           .+.......
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----------~~~~~~~~~  224 (269)
T cd05042         156 YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-----------EQVLKQVVR  224 (269)
T ss_pred             eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-----------HHHHHHHhh
Confidence            111233446778999998742       356889999999999999999 7788753211           111111111


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      ...   ..+.    .+..+..+++.+.+++..|| .||++||++++|++.|.
T Consensus       225 ~~~---~~~~----~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         225 EQD---IKLP----KPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             ccC---ccCC----CCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            110   0001    11123345677888999999 59999999999998863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1e-33  Score=260.86  Aligned_cols=226  Identities=16%  Similarity=0.252  Sum_probs=172.2

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|..  .++.|++|..........+.+.+|+.+++.++|+||+++++++..++..++||||+++++|
T Consensus        24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  103 (297)
T cd06656          24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL  103 (297)
T ss_pred             eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCH
Confidence            46799999999999987  4889999988665555667789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++.+.. ....++..                 .|++|+|.||+++.+    +.++|+|||++......    ......
T Consensus       104 ~~~~~~~~-~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~----~~~~l~Dfg~~~~~~~~----~~~~~~  174 (297)
T cd06656         104 TDVVTETC-MDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMD----GSVKLTDFGFCAQITPE----QSKRST  174 (297)
T ss_pred             HHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEECcCccceEccCC----ccCcCc
Confidence            99987543 23222222                 234567999999876    56999999998764321    112234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ..|++.|+|||.+.+..++.++|||||||++|++++|+.||........           .....          .....
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-----------~~~~~----------~~~~~  233 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----------LYLIA----------TNGTP  233 (297)
T ss_pred             ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-----------eeeec----------cCCCC
Confidence            5689999999999888899999999999999999999999963221100           00000          00000


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+...+..+.+|+.+||+.||++||++.++++
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         234 ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11123345677899999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-34  Score=242.27  Aligned_cols=236  Identities=16%  Similarity=0.264  Sum_probs=172.5

Q ss_pred             ceeeHHHHHHHhcCCcccccccCCCceEEEEEECC--ceEEEEEecccc-cccHHHHHHHHHHHhhc-CCCCcceEEEEE
Q 016850           81 HIYHLSEICAATNNFLAKKFTSSSASASWRGTIRG--KDVIIFQRKLRR-SLDLEQLRERLSVICRS-HHSSLIKLLGAC  156 (381)
Q Consensus        81 ~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~~--~~v~vk~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~  156 (381)
                      ....+.||+.      ...||.|+.|.||+++++.  .-.|||...... .+..+++...+.++.+. .+|+||+.+|+|
T Consensus        87 ~~~dindl~~------l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyF  160 (391)
T KOG0983|consen   87 YQADINDLEN------LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYF  160 (391)
T ss_pred             cccChHHhhh------HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence            3445666653      3458999999999999974  777777754433 23566778888877766 499999999999


Q ss_pred             EeCCeeeEEEeccCCCCHHHHhcCCC-CCCccch------------------HHHHHHhhhcceeecccCCCccceEEcc
Q 016850          157 VSGNCGYLVYEHVSGANLADCLRNPR-NPSFTVL------------------STWLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       157 ~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~------------------~~~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      ..+...+|.||.| ..-++.+|+.-. ..++..+                  ..+|+|+||+|||+|+.    +++||||
T Consensus       161 i~n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~----GniKlCD  235 (391)
T KOG0983|consen  161 ITNTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER----GNIKLCD  235 (391)
T ss_pred             eeCchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccC----CCEEeec
Confidence            9999999999999 466666666532 2222211                  13456888999999998    6799999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~  294 (381)
                      ||++-.+-     .....+...|.+.|||||.+.   ...|+.++|||||||+++||.||+.||+.+..+          
T Consensus       236 FGIsGrlv-----dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td----------  300 (391)
T KOG0983|consen  236 FGISGRLV-----DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD----------  300 (391)
T ss_pred             ccccceee-----cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc----------
Confidence            99997652     333455677999999999875   346899999999999999999999999864431          


Q ss_pred             HHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          295 VDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+........        ..+.+.+  ...+++.+.+|+..||++|+.+||...++++
T Consensus       301 Fe~ltkvln~--------ePP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  301 FEVLTKVLNE--------EPPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHHHHHhc--------CCCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            1111111111        1111211  1237899999999999999999999999875

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2e-33  Score=253.73  Aligned_cols=228  Identities=22%  Similarity=0.362  Sum_probs=169.1

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+. +..+++|..... ....+.+.+|++++++++|+||+++++++.+ ...++||||+++|+|.
T Consensus        11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~   88 (260)
T cd05073          11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLL   88 (260)
T ss_pred             EeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHH
Confidence            567999999999999875 566777765432 2245778999999999999999999999887 7789999999999999


Q ss_pred             HHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  ......+..                 .|.+|+|.||+++..    ..+||+|||++..+...   ......
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~----~~~~l~d~~~~~~~~~~---~~~~~~  161 (260)
T cd05073          89 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIADFGLARVIEDN---EYTARE  161 (260)
T ss_pred             HHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC----CcEEECCCcceeeccCC---Cccccc
Confidence            9997643  223222222                 223566999999876    56999999999765321   111122


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...++..|+|||++....++.++|||||||++|++++ |+.||......        ....    .           +..
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~----~-----------~~~  218 (260)
T cd05073         162 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--------EVIR----A-----------LER  218 (260)
T ss_pred             CCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--------HHHH----H-----------HhC
Confidence            3446778999999988889999999999999999999 99998632110        0111    1           111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ......+...+..+.+++.+||+.||++||++.++++.|+.
T Consensus       219 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         219 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            11112233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-33  Score=254.41  Aligned_cols=224  Identities=19%  Similarity=0.290  Sum_probs=171.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.|+||.||+|+..  ++.+++|...... ......+.+|+++++.++|+||+++++++.++..+++|+||+++++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   85 (274)
T cd06609           6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGS   85 (274)
T ss_pred             hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCc
Confidence            467899999999999984  6788998875543 2245678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++... ......+..                 +|.+|+|.||+++++    +.++|+|||+++.+....    ....
T Consensus        86 L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~----~~~~l~d~g~~~~~~~~~----~~~~  156 (274)
T cd06609          86 CLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEE----GDVKLADFGVSGQLTSTM----SKRN  156 (274)
T ss_pred             HHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC----CCEEEcccccceeecccc----cccc
Confidence            99999875 333333222                 233566889999886    569999999998764321    2233


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...|++.|+|||++.+..++.++|||||||++|+|++|+.||.....           ......            +...
T Consensus       157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----------~~~~~~------------~~~~  213 (274)
T cd06609         157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----------MRVLFL------------IPKN  213 (274)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----------HHHHHH------------hhhc
Confidence            45688999999999988899999999999999999999999963211           000000            0111


Q ss_pred             ccCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVE-VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+..+.. ++..+.+++.+||..||++||+++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         214 NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            11112222 5678999999999999999999999965

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.6e-33  Score=253.88  Aligned_cols=229  Identities=17%  Similarity=0.269  Sum_probs=169.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|+..  ++.|++|............+.+|+.+++.++||||+++++++.+.+..++||||+++|+|
T Consensus        14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L   93 (267)
T cd06645          14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSL   93 (267)
T ss_pred             HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcH
Confidence            466999999999999884  788889887655444556788999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++.........++..+                 |.+|+|+||+++..    ..+||+|||++..+..    .......
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~----~~~~l~dfg~~~~~~~----~~~~~~~  165 (267)
T cd06645          94 QDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDN----GHVKLADFGVSAQITA----TIAKRKS  165 (267)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC----CCEEECcceeeeEccC----ccccccc
Confidence            999987665554443322                 33566899999876    5599999999876532    1122234


Q ss_pred             cCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          238 IEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       238 ~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ..|+..|+|||++.   ...++.++|||||||++|+|++|+.||.......       ..    .....   ..   ...
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~-------~~----~~~~~---~~---~~~  228 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-------AL----FLMTK---SN---FQP  228 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-------hH----Hhhhc---cC---CCC
Confidence            57899999999874   4568899999999999999999999985322100       00    00000   00   000


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +...  ....++..+.+++.+||+.||++||++.+|++
T Consensus       229 ~~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         229 PKLK--DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             Cccc--ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            0000  01124567899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.9e-33  Score=255.15  Aligned_cols=234  Identities=20%  Similarity=0.287  Sum_probs=170.3

Q ss_pred             ccccccCCCceEEEEEEC--C---ceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--G---KDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~---~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.  +   ..|++|...... .....++.+|+.++++++||||+++++++.+++..++||||++
T Consensus         9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~   88 (269)
T cd05065           9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME   88 (269)
T ss_pred             EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence            567899999999999985  2   258888765432 2245689999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... .....++..                 +|.+|+|.||+++.+    ..+||+|||++...........
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~----~~~kl~dfg~~~~~~~~~~~~~  164 (269)
T cd05065          89 NGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSN----LVCKVSDFGLSRFLEDDTSDPT  164 (269)
T ss_pred             CCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCC----CcEEECCCccccccccCccccc
Confidence            999999997643 233332222                 233667999999776    5699999999876532111111


Q ss_pred             cc-ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          233 GK-VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       233 ~~-~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .. ......+..|+|||++.+..++.++|||||||++||+++ |..||.....        ......             
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--------~~~~~~-------------  223 (269)
T cd05065         165 YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVINA-------------  223 (269)
T ss_pred             cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--------HHHHHH-------------
Confidence            00 011112457999999998899999999999999999886 9999853211        011111             


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                        +........+..++..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus       224 --i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         224 --IEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             --HHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              111111122334567789999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-36  Score=299.70  Aligned_cols=231  Identities=19%  Similarity=0.241  Sum_probs=180.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      +..||+|.||.||-|...  |.-.|+|-++.....  ....+.+|..+|..|+|||||++||+=...+..+|.||||++|
T Consensus      1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence            456899999999999985  666777766554433  4567889999999999999999999988899999999999999


Q ss_pred             CHHHHhcCCCCCCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+.+...+...+..                 ....|+||||+||+|+..    +.+|++|||.|..+...........
T Consensus      1320 sLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~----g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1320 SLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN----GLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred             cHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC----CcEEeecccceeEecCchhcCCHHH
Confidence            9999998766544222                 123456788999999998    5699999999988754433334455


Q ss_pred             cccCCCccccchhhhcCC---CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          236 NKIEGTRGYMAPEFQASG---VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~---~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      +...||+.|||||++.+.   ...-+.||||+||++.||+||+.||...+.              -++++..        
T Consensus      1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn--------------e~aIMy~-------- 1453 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN--------------EWAIMYH-------- 1453 (1509)
T ss_pred             HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc--------------hhHHHhH--------
Confidence            678899999999999754   467899999999999999999999963322              1111100        


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      +...-.+..|...+.+-.+++.+||+.||++|.++.|+++.
T Consensus      1454 V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            12223566777899999999999999999999999887653

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1e-33  Score=262.29  Aligned_cols=240  Identities=13%  Similarity=0.161  Sum_probs=167.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+..  ++.||+|........ ....+.+|++++++++||||+++++++.+++..++||||++ +
T Consensus        10 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~   88 (309)
T cd07872          10 KLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-K   88 (309)
T ss_pred             EEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-C
Confidence            4567999999999999885  678999987654332 34567889999999999999999999999999999999996 6


Q ss_pred             CHHHHhcCCCC-CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRN-PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~-~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++..... .....+..                 +|++|+|+||+++..    ..+||+|||+++....    ....
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~----~~~~  160 (309)
T cd07872          89 DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER----GELKLADFGLARAKSV----PTKT  160 (309)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC----CCEEECccccceecCC----Cccc
Confidence            89988865432 33332222                 234667999999876    5699999999976422    1112


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-------
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-------  306 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  306 (381)
                      .....+++.|+|||++.+ ..++.++|||||||++|||++|++||.......        .............       
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~~~~  232 (309)
T cd07872         161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED--------ELHLIFRLLGTPTEETWPGI  232 (309)
T ss_pred             cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHhCCCCHHHHhhh
Confidence            234568999999998865 468899999999999999999999996432211        1111100000000       


Q ss_pred             cchhhhhc---ccccC----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVD---RRLKD----SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~---~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+.+   +....    .....+++++.+|+.+||+.||.+|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         233 SSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             cchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            00000000   00000    001235678899999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-34  Score=270.26  Aligned_cols=217  Identities=15%  Similarity=0.203  Sum_probs=159.5

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhc---CCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRS---HHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ||+|+||+||+|+..  ++.||+|++......   ....+.+|..++.++   +||||+++++++.+.+.+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999985  788999986433211   234455677777765   699999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++......+...+..+                 |++|+|+|||++.+    +.+||+|||+++....    ....
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~----~~~kl~Dfg~a~~~~~----~~~~  152 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT----GHIALCDFGLSKANLT----DNKT  152 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----CCEEEecCCcCcCCCC----CCCC
Confidence            999999987666554443332                 34667888888876    5699999999875321    1122


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ....+||+.|+|||++.+. .++.++|||||||++|||++|+.||.....           .+.......+         
T Consensus       153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----------~~~~~~i~~~---------  212 (330)
T cd05586         153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----------QQMYRNIAFG---------  212 (330)
T ss_pred             ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----------HHHHHHHHcC---------
Confidence            3456799999999998754 479999999999999999999999963211           1111111100         


Q ss_pred             cccccCCCC-HHHHHHHHHHHHHhhccCCCCCCChH
Q 016850          314 DRRLKDSYP-VEVAEKMVLLGLQCVDEDPGKRPDMR  348 (381)
Q Consensus       314 ~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~  348 (381)
                        ..  .++ ..+++.+.+|+.+||+.||++||++.
T Consensus       213 --~~--~~~~~~~~~~~~~li~~~L~~~P~~R~~~~  244 (330)
T cd05586         213 --KV--RFPKNVLSDEGRQFVKGLLNRNPQHRLGAH  244 (330)
T ss_pred             --CC--CCCCccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence              00  111 13467889999999999999999643

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.2e-33  Score=253.04  Aligned_cols=231  Identities=20%  Similarity=0.299  Sum_probs=172.1

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccc------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|... ++.+|+|........      ....+.+|+++|++++|+||+++++++.+.+.+++||||+
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (265)
T cd06631           5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV   84 (265)
T ss_pred             cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence            567899999999999874 677899876543221      2356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC--C
Q 016850          170 SGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG--N  230 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~--~  230 (381)
                      ++++|.+++..........+..                 +|.+|+|.||+++++    ..++|+|||++........  .
T Consensus        85 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~  160 (265)
T cd06631          85 PGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPN----GIIKLIDFGCARRLAWVGLHGT  160 (265)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCC----CeEEeccchhhHhhhhcccccc
Confidence            9999999998765544443322                 234567999999876    5699999999876422111  1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .........|+..|+|||++.+..++.++|||||||++|+|++|+.||.....          ... ......       
T Consensus       161 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----------~~~-~~~~~~-------  222 (265)
T cd06631         161 HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----------LAA-MFYIGA-------  222 (265)
T ss_pred             ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh----------HHH-HHHhhh-------
Confidence            11122345689999999999888899999999999999999999999963211          000 000000       


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .....+..+..++..+.+++.+||+.+|.+||++.++++
T Consensus       223 ---~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         223 ---HRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             ---ccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence               000112233446678999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.2e-34  Score=270.40  Aligned_cols=245  Identities=17%  Similarity=0.146  Sum_probs=164.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~lv  165 (381)
                      ..+.||+|+||.||+|...  +..||+|+.....  ......+.+|+.+++.++||||+++++++...+      .+|+|
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv  104 (359)
T cd07876          25 QLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLV  104 (359)
T ss_pred             EEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEE
Confidence            4578999999999999874  7889999875432  224567889999999999999999999987543      57999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ ++|.+.+...  .....+                 ..+|++|+|+||+++.+    +.+||+|||+++....  
T Consensus       105 ~e~~~-~~l~~~~~~~--~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~----~~~kl~Dfg~a~~~~~--  175 (359)
T cd07876         105 MELMD-ANLCQVIHME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTACT--  175 (359)
T ss_pred             EeCCC-cCHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC----CCEEEecCCCcccccc--
Confidence            99996 6777776432  221111                 12345677999999886    5699999999975421  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc-------cccchhHHHHH---
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID-------GYRRVSVVDKA---  298 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~-------~~~~~~~~~~~---  298 (381)
                         ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.........       ..+........   
T Consensus       176 ---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (359)
T cd07876         176 ---NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPT  252 (359)
T ss_pred             ---CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence               12234467899999999999889999999999999999999999999743211000       00000000000   


Q ss_pred             -HHHHcCCc----cchhhhhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          299 -SEAVAGGV----GGVRKWVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       299 -~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ........    ..+.+.......   .......++.+.+|+.+||+.||++|||+.|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         253 VRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence             00000000    000000000000   0011123567899999999999999999999976

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.4e-33  Score=259.81  Aligned_cols=226  Identities=16%  Similarity=0.258  Sum_probs=172.2

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||.|+||.||+|..  .++.|++|..........+.+.+|+.+++.++||||+++++++.+.+.+++||||+++|+|
T Consensus        24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  103 (296)
T cd06655          24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSL  103 (296)
T ss_pred             EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcH
Confidence            46799999999999986  4789999987665555567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++.... ..+.++..                 .|.+|+|.||+++.+    +.+||+|||++..+...    ......
T Consensus       104 ~~~~~~~~-l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~----~~~kl~dfg~~~~~~~~----~~~~~~  174 (296)
T cd06655         104 TDVVTETC-MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMD----GSVKLTDFGFCAQITPE----QSKRST  174 (296)
T ss_pred             HHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEEccCccchhcccc----cccCCC
Confidence            99987643 33333222                 234667999999876    56999999998764321    112234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ..|+..|+|||.+.+..++.++|||||||++|+|++|+.||.....           ..........          ...
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~-----------~~~~~~~~~~----------~~~  233 (296)
T cd06655         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----------LRALYLIATN----------GTP  233 (296)
T ss_pred             cCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhc----------CCc
Confidence            5689999999999888899999999999999999999999953221           0110010000          000


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..+++.+.++|.+||..||.+||++.++++
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         234 ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            11123345678999999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=4.3e-33  Score=250.64  Aligned_cols=228  Identities=25%  Similarity=0.404  Sum_probs=172.4

Q ss_pred             ccccccCCCceEEEEEECC------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIRG------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||.|+||.||++.+.+      ..+++|........ ..+.+.+|+.++..++|+||+++++++.+.+..+++|||+
T Consensus         4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~   83 (258)
T smart00219        4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM   83 (258)
T ss_pred             cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence            4679999999999999864      77888887544433 4678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          170 SGANLADCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       170 ~~gsL~~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ++++|.+++.....  ..+.++..                 +|.+|+|+||+++++    ..++|+|||++......   
T Consensus        84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~~~~~~---  156 (258)
T smart00219       84 EGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGEN----LVVKISDFGLSRDLYDD---  156 (258)
T ss_pred             CCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccC----CeEEEcccCCceecccc---
Confidence            99999999976543  44333332                 234567999999887    56999999999875332   


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........+++.|+|||.+.+..++.++||||||+++++|++ |.+||.....        ......            
T Consensus       157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~------------  216 (258)
T smart00219      157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEY------------  216 (258)
T ss_pred             cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH------------
Confidence            1111112337889999999988889999999999999999998 7888753111        011111            


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                         .........+...+..+.+++.+||..||.+|||+.++++.|
T Consensus       217 ---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      217 ---LKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             ---HhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence               111111222334677899999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=3.8e-33  Score=261.28  Aligned_cols=237  Identities=21%  Similarity=0.300  Sum_probs=173.2

Q ss_pred             cccccccCCCceEEEEEEC---------CceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|+..         +..|++|....... ...+.+.+|+++++++ +||||+++++++...+..++
T Consensus        16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   95 (334)
T cd05100          16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV   95 (334)
T ss_pred             ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEE
Confidence            3678999999999999853         12578887553322 2456789999999999 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCC----------------CCcc-------chH----------HHHHHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRN----------------PSFT-------VLS----------TWLSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~----------------~~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~  211 (381)
                      ||||+++|+|.++|.....                ..+.       ++.          .+|++|+|.||+++++    .
T Consensus        96 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~----~  171 (334)
T cd05100          96 LVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTED----N  171 (334)
T ss_pred             EEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCC----C
Confidence            9999999999999975321                1111       111          1234667999999876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++.....  ..........++..|+|||++.+..++.++|||||||++|||++ |..||.....       
T Consensus       172 ~~kL~Dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------  242 (334)
T cd05100         172 VMKIADFGLARDVHNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-------  242 (334)
T ss_pred             cEEECCcccceecccc--cccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-------
Confidence            6999999999764321  11111222344678999999988889999999999999999998 8888853211       


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                          .+....            +........+..++..+.+|+.+||+.+|.+||++.++++.|+++....
T Consensus       243 ----~~~~~~------------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         243 ----EELFKL------------LKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             ----HHHHHH------------HHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence                111111            1111122223345678999999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.5e-33  Score=253.62  Aligned_cols=225  Identities=16%  Similarity=0.272  Sum_probs=163.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeC------CeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSG------NCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~------~~~~lv~e  167 (381)
                      .+.||+|+||.||+|...  ++.+++|..... ......+.+|+.++.++ +|+||+++++++...      ..+++|||
T Consensus        11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e   89 (272)
T cd06637          11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME   89 (272)
T ss_pred             HHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEE
Confidence            456999999999999884  677888876543 23456789999999998 799999999998753      46899999


Q ss_pred             ccCCCCHHHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          168 HVSGANLADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |+++|+|.+++....  ...+..+..                 .|++|+|+||+++++    ..+||+|||++.....  
T Consensus        90 ~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~----~~~~l~Dfg~~~~~~~--  163 (272)
T cd06637          90 FCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN----AEVKLVDFGVSAQLDR--  163 (272)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC----CCEEEccCCCceeccc--
Confidence            999999999998643  233332222                 223566889898876    5699999999976432  


Q ss_pred             CCccccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                        .........|++.|+|||++.     +..++.++|||||||++|||++|+.||.....          . ....... 
T Consensus       164 --~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~----------~-~~~~~~~-  229 (272)
T cd06637         164 --TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----------M-RALFLIP-  229 (272)
T ss_pred             --ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH----------H-HHHHHHh-
Confidence              112234567899999999886     34578899999999999999999999853211          0 0000000 


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                ........+..++..+.+|+.+||..||.+||++.++++
T Consensus       230 ----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         230 ----------RNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             ----------cCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence                      000011112235568999999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.2e-33  Score=255.10  Aligned_cols=231  Identities=17%  Similarity=0.216  Sum_probs=166.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|.+.  ++.|++|...... ......+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   85 (279)
T cd06619           6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS   85 (279)
T ss_pred             eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence            467899999999999874  7788888865432 2234678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCC---CccchH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCC
Q 016850          174 LADCLRNPRNP---SFTVLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEG  240 (381)
Q Consensus       174 L~~~l~~~~~~---~~~~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~g  240 (381)
                      |..+..-....   -..+++          ..|.+|+|.||+++.+    +.++|+|||++..+..      .......|
T Consensus        86 l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~----~~~~l~dfg~~~~~~~------~~~~~~~~  155 (279)
T cd06619          86 LDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTR----GQVKLCDFGVSTQLVN------SIAKTYVG  155 (279)
T ss_pred             hHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCC----CCEEEeeCCcceeccc------ccccCCCC
Confidence            97653211100   001111          2234667999999886    5699999999976422      12334679


Q ss_pred             CccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCC
Q 016850          241 TRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDS  320 (381)
Q Consensus       241 t~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (381)
                      +..|+|||++.+..++.++||||||+++|+|++|+.||..........    ..... ....          ........
T Consensus       156 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~----~~~~~-~~~~----------~~~~~~~~  220 (279)
T cd06619         156 TNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL----MPLQL-LQCI----------VDEDPPVL  220 (279)
T ss_pred             ChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc----chHHH-HHHH----------hccCCCCC
Confidence            999999999998889999999999999999999999996432211100    00010 0010          00000111


Q ss_pred             CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          321 YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       321 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....++++.+++.+||+.||++||++.|+++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         221 PVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            11234567999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.1e-33  Score=264.13  Aligned_cols=167  Identities=19%  Similarity=0.231  Sum_probs=130.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+...      .....|+.++++++|||||++++++...+..++||||+ .|+
T Consensus        70 ~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~-~~~  142 (357)
T PHA03209         70 VIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY-SSD  142 (357)
T ss_pred             EEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc-CCc
Confidence            5678999999999999986  45777776321      23456999999999999999999999999999999999 579


Q ss_pred             HHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++... ....+..+..+                 |++|+|+|||++..    ..+||+|||+++...     .....
T Consensus       143 l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~----~~~kl~DfG~a~~~~-----~~~~~  213 (357)
T PHA03209        143 LYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV----DQVCIGDLGAAQFPV-----VAPAF  213 (357)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC----CCEEEecCccccccc-----cCccc
Confidence            99988653 33343333222                 34567888888876    459999999987521     11122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVL  278 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf  278 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||+++..++
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            3467999999999999889999999999999999999865544

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=5.4e-33  Score=254.26  Aligned_cols=246  Identities=15%  Similarity=0.202  Sum_probs=172.7

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e  167 (381)
                      .+.||+|+||.||++.+      .+..|++|...... ......+.+|++++++++||||+++++++.+.  ...++|||
T Consensus         9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (284)
T cd05079           9 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME   88 (284)
T ss_pred             ceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEE
Confidence            46799999999999985      26778888865432 22356789999999999999999999998875  56899999


Q ss_pred             ccCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          168 HVSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |+++++|.+++.... ..++..+..                 .|++|+|.||+++++    ..++|+|||+++.+.....
T Consensus        89 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~----~~~~l~dfg~~~~~~~~~~  164 (284)
T cd05079          89 FLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE----HQVKIGDFGLTKAIETDKE  164 (284)
T ss_pred             ccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCC----CCEEECCCccccccccCcc
Confidence            999999999996543 233333222                 234677999999876    5599999999987532111


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCc---ccccchhHHHHHHHHHcCCc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI---DGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  306 (381)
                       .........|+..|+|||++.+..++.++|||||||++|||++++.|+........   .+.............     
T Consensus       165 -~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  238 (284)
T cd05079         165 -YYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV-----  238 (284)
T ss_pred             -ceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH-----
Confidence             11112345577889999999888899999999999999999998776532111000   000000000000000     


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                            .........+..++..+.+|+.+||+.||++||++.++++.|+.++
T Consensus       239 ------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~  284 (284)
T cd05079         239 ------LEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL  284 (284)
T ss_pred             ------HHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence                  1111111223346678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.2e-33  Score=252.04  Aligned_cols=234  Identities=22%  Similarity=0.305  Sum_probs=171.5

Q ss_pred             ccccccCCCceEEEEEEC--Cc----eEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GK----DVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~----~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+.  +.    .+++|....... .....+.+|+.++.+++||||+++++++.. ...++||||+
T Consensus        12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~   90 (279)
T cd05057          12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLM   90 (279)
T ss_pred             cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecC
Confidence            467999999999999874  22    467776543322 235678899999999999999999999887 7889999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..+                 |++|+|.||+++++    ..+||+|||+++.+....  .
T Consensus        91 ~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~----~~~kL~dfg~~~~~~~~~--~  164 (279)
T cd05057          91 PLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLDVDE--K  164 (279)
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCC----CeEEECCCcccccccCcc--c
Confidence            9999999998743 3333333322                 33566999999876    559999999998753211  1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........++..|+|||.+....++.++||||||+++||+++ |+.||......        .+..    .         
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~----~---------  223 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--------EIPD----L---------  223 (279)
T ss_pred             ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHH----H---------
Confidence            111122334678999999988889999999999999999998 99998632110        1111    1         


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                        +........+..++..+.+++.+||..||..||++.++++.|+++...
T Consensus       224 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         224 --LEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             --HhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence              111111122333556789999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1e-32  Score=250.00  Aligned_cols=229  Identities=14%  Similarity=0.217  Sum_probs=167.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-----cHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-----DLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|...  ++.|++|+.......     ....+.+|+.++++++||||+++++++.+  .+.++++|
T Consensus         6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~   85 (266)
T cd06651           6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM   85 (266)
T ss_pred             ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence            3567899999999999874  788999876543221     24568889999999999999999998875  46789999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++++|.+++.............+                 |.+|+|+||+++++    ..+||+|||+++.+.... 
T Consensus        86 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~----~~~~l~dfg~~~~~~~~~-  160 (266)
T cd06651          86 EYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSA----GNVKLGDFGASKRLQTIC-  160 (266)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC----CCEEEccCCCcccccccc-
Confidence            99999999999987655443333322                 23456888888776    569999999987643211 


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      ..........++..|+|||++.+..++.++|||||||++|||++|+.||.....           .......        
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-----------~~~~~~~--------  221 (266)
T cd06651         161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-----------MAAIFKI--------  221 (266)
T ss_pred             ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-----------HHHHHHH--------
Confidence            111122335689999999999888899999999999999999999999963211           1111111        


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         ......+..+..+.+.+.+++ +||..+|++||+++||++
T Consensus       222 ---~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         222 ---ATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             ---hcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence               111112334455667788888 688899999999999965

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-32  Score=249.06  Aligned_cols=229  Identities=19%  Similarity=0.252  Sum_probs=173.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||.|+||.||+|...  ++.+++|..........+.+.+|++++++++||||+++++++.+.+.+|++|||+++++|
T Consensus         8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l   87 (262)
T cd06613           8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL   87 (262)
T ss_pred             EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcH
Confidence            467899999999999984  678899887665555678899999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNP-RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~-~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++... ..+...++..                 +|.+|+|.||+++++    +.+||+|||++..+..    ......
T Consensus        88 ~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~----~~~~l~d~g~~~~~~~----~~~~~~  159 (262)
T cd06613          88 QDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTED----GDVKLADFGVSAQLTA----TIAKRK  159 (262)
T ss_pred             HHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCC----CCEEECccccchhhhh----hhhccc
Confidence            9998775 4444433322                 234567999999876    5599999999876432    111223


Q ss_pred             ccCCCccccchhhhcCC---CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          237 KIEGTRGYMAPEFQASG---VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~---~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ...++..|+|||++.+.   .++.++||||||+++|||++|+.||......           ........   ..    +
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-----------~~~~~~~~---~~----~  221 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM-----------RALFLISK---SN----F  221 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHh---cc----C
Confidence            45789999999998766   7889999999999999999999998632210           00000000   00    0


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      . ......+..++..+.+++.+||..||.+||++.+|+.
T Consensus       222 ~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         222 P-PPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             C-CccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0 0011123456778999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=8e-34  Score=268.10  Aligned_cols=245  Identities=18%  Similarity=0.123  Sum_probs=164.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv  165 (381)
                      ..+.||+|+||.||++...  ++.||+|+......  .....+.+|+.+++.++||||+++++++...      ...|+|
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv  100 (355)
T cd07874          21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLV  100 (355)
T ss_pred             EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEE
Confidence            4577999999999999874  78899998754322  2356788999999999999999999988643      357999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccc-------h----------HHHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTV-------L----------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~-------~----------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ ++|.+.+...  .....       +          ..+|++|+|+|||++.+    +.+||+|||+++....  
T Consensus       101 ~e~~~-~~l~~~~~~~--l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~----~~~kl~Dfg~~~~~~~--  171 (355)
T cd07874         101 MELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTAGT--  171 (355)
T ss_pred             hhhhc-ccHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCC----CCEEEeeCcccccCCC--
Confidence            99995 6787777542  22111       1          12345778999999876    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc-------ccchhHH----HH
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG-------YRRVSVV----DK  297 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~-------~~~~~~~----~~  297 (381)
                         ........||+.|+|||++.+..++.++|||||||++|+|++|+.||..........       .......    ..
T Consensus       172 ---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (355)
T cd07874         172 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  248 (355)
T ss_pred             ---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHH
Confidence               122344678999999999998889999999999999999999999996422100000       0000000    00


Q ss_pred             HHHHHcCCcc----chhhhhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          298 ASEAVAGGVG----GVRKWVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       298 ~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........    .+.........   ...+......+.+|+.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence            0000000000    00000000000   0111223567899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.6e-33  Score=254.17  Aligned_cols=225  Identities=17%  Similarity=0.252  Sum_probs=162.4

Q ss_pred             cccccCCCceEEEEEECC---------ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           98 KKFTSSSASASWRGTIRG---------KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~---------~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      +.||.|+||.||+|....         ..+++|..........+.+.+|+.+++.++|||||++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            368999999999998742         23666665433333456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC-CCccchHH-----------------HHHHhhhcceeecccCC----CccceEEccccccccccc
Q 016850          169 VSGANLADCLRNPRN-PSFTVLST-----------------WLSRMQSSSIIVSEENA----GSLCAKICHFGTAELCGE  226 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~-~~~~~~~~-----------------~~~~l~~~Nill~~~~~----~~~~~kl~DFG~a~~~~~  226 (381)
                      +++|+|.+++..... ..+.....                 .|++|+|.||+++.++.    ....++++|||++.....
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~  160 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP  160 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC
Confidence            999999999976543 33333222                 22356788888876542    113479999998865321


Q ss_pred             CCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCC-ccccccccCCcccccchhHHHHHHHHHcC
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGE-EVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                              .....+++.|+|||++.+. .++.++|||||||++|||++|. .||......        ....    .   
T Consensus       161 --------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~~~----~---  217 (258)
T cd05078         161 --------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KKLQ----F---  217 (258)
T ss_pred             --------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HHHH----H---
Confidence                    2235688999999998764 5789999999999999999984 555321110        0000    0   


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                              ...  ....+.....++.+|+.+||+.||++|||++++++.|+
T Consensus       218 --------~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         218 --------YED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             --------HHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                    000  11223334567999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=4.5e-33  Score=257.50  Aligned_cols=250  Identities=12%  Similarity=0.135  Sum_probs=184.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||++.+.  ++.|++|.......   ...+.+.+|+++++.++||||+++++.+..++.+++||||+++
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g   85 (305)
T cd05609           6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEG   85 (305)
T ss_pred             eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence            467899999999999986  67899998654332   2345788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC-----
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG-----  229 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~-----  229 (381)
                      |+|.+++......++..+..+                 |++|+|.||+++..    +.+||+|||+++.......     
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~----~~~~l~dfg~~~~~~~~~~~~~~~  161 (305)
T cd05609          86 GDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSM----GHIKLTDFGLSKIGLMSLTTNLYE  161 (305)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCC----CCEEEeeCCCccccCcCccccccc
Confidence            999999987665554433322                 33567999999876    5699999999864211000     


Q ss_pred             ------CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          230 ------NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       230 ------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                            ..........|+..|+|||.+.+..++.++|||||||++|||++|+.||.....           .+.......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----------~~~~~~~~~  230 (305)
T cd05609         162 GHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----------EELFGQVIS  230 (305)
T ss_pred             cccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHh
Confidence                  000111234688899999999888899999999999999999999999853211           111111110


Q ss_pred             CCccchhhhhccccc-CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCc
Q 016850          304 GGVGGVRKWVDRRLK-DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPT  372 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~  372 (381)
                                 .... +.....++..+.+++.+||+.||++||++.++.+.|+.-+.....|.....-..
T Consensus       231 -----------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~~~~~~  289 (305)
T cd05609         231 -----------DDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQKA  289 (305)
T ss_pred             -----------cccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHHhhcCC
Confidence                       0000 111124567899999999999999999999999999987777777777665544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.3e-33  Score=253.41  Aligned_cols=245  Identities=18%  Similarity=0.231  Sum_probs=175.5

Q ss_pred             ccccccCCCceEEEEEEC------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|.++      +..+|+|+....... ..+.+.+|+++++.++|+||+++++++..  ....++|||
T Consensus         9 ~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   88 (284)
T cd05038           9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIME   88 (284)
T ss_pred             heeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEe
Confidence            467999999999999874      568899887544432 46789999999999999999999999887  567899999


Q ss_pred             ccCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          168 HVSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |+++|+|.+++.... ......+..                 .|.+|+|.||+++.+    ..++|+|||++........
T Consensus        89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~~~~  164 (284)
T cd05038          89 YLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE----DLVKISDFGLAKVLPEDKD  164 (284)
T ss_pred             cCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC----CCEEEcccccccccccCCc
Confidence            999999999997654 233332222                 234567999999886    5699999999987532111


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc---cccchhHHHHHHHHHcCCc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID---GYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  306 (381)
                       .........++..|+|||.+.+..++.++||||||+++|||++|..||.........   ..........         
T Consensus       165 -~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---------  234 (284)
T cd05038         165 -YYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR---------  234 (284)
T ss_pred             -ceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH---------
Confidence             111112234566799999998888999999999999999999999988542221100   0000000111         


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                        +.+.+........+..++..+.+|+.+||+.||++||++.||+++|+.+
T Consensus       235 --~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         235 --LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             --HHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence              1111122222222334567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=1e-32  Score=248.13  Aligned_cols=225  Identities=18%  Similarity=0.268  Sum_probs=170.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|.+.  +..+++|.......  .+++.+|++++++++||||+++++++.+...+|+++||+++++|
T Consensus         8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L   85 (256)
T cd06612           8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSV   85 (256)
T ss_pred             hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcH
Confidence            467999999999999986  57888888654332  67899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ..++..+..                 .|.+|+|.||+++++    ..++|+|||++......    .....
T Consensus        86 ~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~----~~~~l~dfg~~~~~~~~----~~~~~  157 (256)
T cd06612          86 SDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEE----GQAKLADFGVSGQLTDT----MAKRN  157 (256)
T ss_pred             HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCC----CcEEEcccccchhcccC----ccccc
Confidence            99997533 333333222                 233566999999886    56999999999865321    11223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...|+..|+|||++.+..++.++|||||||++|+|++|+.||.......           ......        .  ...
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~-----------~~~~~~--------~--~~~  216 (256)
T cd06612         158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR-----------AIFMIP--------N--KPP  216 (256)
T ss_pred             cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-----------hhhhhc--------c--CCC
Confidence            4558899999999988889999999999999999999999986432110           000000        0  000


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+..++..+.+++.+||+.||.+||++.|+++
T Consensus       217 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         217 PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            011123456678999999999999999999999975

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=4.3e-33  Score=255.09  Aligned_cols=237  Identities=16%  Similarity=0.191  Sum_probs=170.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||++...  ++.+|+|........   ....+.+|+.++++++|+||+++++.+.+.+..|+||||+++
T Consensus         5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g   84 (285)
T cd05630           5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG   84 (285)
T ss_pred             eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence            456899999999999985  678999876543222   234577899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+++....  ..+...+..+                 |++|+|+||+++..    ..++|+|||++.....     .
T Consensus        85 ~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~----~~~~l~Dfg~~~~~~~-----~  155 (285)
T cd05630          85 GDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH----GHIRISDLGLAVHVPE-----G  155 (285)
T ss_pred             CcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC----CCEEEeeccceeecCC-----C
Confidence            99999986533  2333332222                 23566888888876    4599999999875421     1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......|+..|+|||++.+..++.++|||||||++|+|++|+.||.......        ..+......          
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--------~~~~~~~~~----------  217 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--------KREEVERLV----------  217 (285)
T ss_pred             ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--------hHHHHHhhh----------
Confidence            12234579999999999998889999999999999999999999996432110        000000000          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~  365 (381)
                        .......+..+++.+.+|+.+||+.||++|||     +.|+++   +-+....+|.
T Consensus       218 --~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~---h~~~~~~~~~  270 (285)
T cd05630         218 --KEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE---HPLFKQINFK  270 (285)
T ss_pred             --hhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc---ChhhhccCHH
Confidence              00011123345677999999999999999999     667654   3344444554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.2e-33  Score=264.29  Aligned_cols=243  Identities=15%  Similarity=0.187  Sum_probs=168.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+++..  ++.||+|......   ......+.+|+.++..++|+||+++++++.+.+..|+||||++
T Consensus         5 i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~   84 (331)
T cd05624           5 IIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYV   84 (331)
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence            3567999999999999985  6778888864321   1234557889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC-CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++... .......+..                 +|++|+|+|||++..    +.+||+|||+++.+..   ...
T Consensus        85 gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~----~~~kl~DfG~a~~~~~---~~~  157 (331)
T cd05624          85 GGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMN----GHIRLADFGSCLKMNQ---DGT  157 (331)
T ss_pred             CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCC----CCEEEEeccceeeccC---CCc
Confidence            99999999763 3344333222                 234677999999876    5699999999976532   111


Q ss_pred             ccccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          233 GKVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                      .......||+.|+|||++.+     +.++.++|||||||++|||++|+.||.....           .+........ ..
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----------~~~~~~i~~~-~~  225 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----------VETYGKIMNH-EE  225 (331)
T ss_pred             eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----------HHHHHHHHcC-CC
Confidence            12234579999999998875     4678999999999999999999999963211           1111111110 00


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHHHHHHHHhhhhhhh
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                      .      ..+ +.....+++.+.+++.+||..++++  |+++++++   +.-+.+..+|...
T Consensus       226 ~------~~~-p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~---~h~~f~~~~~~~~  277 (331)
T cd05624         226 R------FQF-PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFK---KHAFFEGIDWENI  277 (331)
T ss_pred             c------ccC-CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHh---cCCCcCCCCHHHH
Confidence            0      000 1111235678999999999876543  34566554   4444444455443

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.8e-32  Score=263.58  Aligned_cols=242  Identities=16%  Similarity=0.174  Sum_probs=163.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ....||+|+||.||+|.+.  ++.|++|...      ...+.+|+++|++|+|+|||++++++..++..++|||++ .|+
T Consensus       173 i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~-~~~  245 (461)
T PHA03211        173 IHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY-RSD  245 (461)
T ss_pred             EEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc-CCC
Confidence            4567899999999999996  5778888532      234678999999999999999999999999999999999 589


Q ss_pred             HHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... .+.+.++..+                 |++|||+|||++..    ..+||+|||+++.+...  ......
T Consensus       246 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~----~~vkL~DFGla~~~~~~--~~~~~~  319 (461)
T PHA03211        246 LYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGP----EDICLGDFGAACFARGS--WSTPFH  319 (461)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCC----CCEEEcccCCceecccc--cccccc
Confidence            999987543 3443333322                 33567888888876    55999999999865321  111122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccC-CcccccchhHHHHHHHHHcCCccch-----
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDE-GIDGYRRVSVVDKASEAVAGGVGGV-----  309 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----  309 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|..++-..... ....+. ..+...+...... ...+     
T Consensus       320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~-~~l~~~i~~~~~~-~~~~~~~~~  397 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYD-AQILRIIRQAQVH-VDEFPQHAG  397 (461)
T ss_pred             cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcH-HHHHHHHHhhccc-cccCCCCcc
Confidence            3467999999999999989999999999999999999987655322111 111100 0111111110000 0000     


Q ss_pred             ---hhhhc----ccccCCC----C---HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 ---RKWVD----RRLKDSY----P---VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ---~~~~~----~~~~~~~----~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         ...+.    .......    .   ......+.+||.+||+.||.+|||+.|+|+
T Consensus       398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence               00000    0000000    0   123457899999999999999999999976

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.7e-33  Score=265.42  Aligned_cols=245  Identities=18%  Similarity=0.128  Sum_probs=164.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv  165 (381)
                      ..+.||+|+||.||+|...  ++.||||+.....  ......+.+|+.+++.++||||+++++++...      ..+|+|
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv  107 (364)
T cd07875          28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV  107 (364)
T ss_pred             EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEE
Confidence            4577999999999999874  7889999875432  22456788999999999999999999987643      357999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccch-------H----------HHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVL-------S----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~-------~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ ++|.+++...  .....+       +          .+|++|+|+||+++.+    +.+||+|||+++....  
T Consensus       108 ~e~~~-~~l~~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~~kL~DfG~a~~~~~--  178 (364)
T cd07875         108 MELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTAGT--  178 (364)
T ss_pred             EeCCC-CCHHHHHHhc--CCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCC----CcEEEEeCCCccccCC--
Confidence            99995 6888877542  222211       1          2344677999999876    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc-------ccchhHHHHH---
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG-------YRRVSVVDKA---  298 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~-------~~~~~~~~~~---  298 (381)
                         ........||+.|+|||++.+..++.++|||||||++|||++|+.||..........       .+........   
T Consensus       179 ---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (364)
T cd07875         179 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  255 (364)
T ss_pred             ---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence               122344678999999999999899999999999999999999999996432110000       0000000000   


Q ss_pred             -HHHHcCCc----cchhhhhcccc---cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          299 -SEAVAGGV----GGVRKWVDRRL---KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       299 -~~~~~~~~----~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ........    ..+..+.....   ...........+++|+.+||+.||.+|||+.++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence             00000000    00000000000   00011123467899999999999999999999976

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.1e-33  Score=263.93  Aligned_cols=222  Identities=19%  Similarity=0.236  Sum_probs=178.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ....||+|.|++|.+|++.  ++.||||.+....-.  ..+.+.+|+++|+.|+|||||+++.+.+....+|+||||+.+
T Consensus        60 i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~  139 (596)
T KOG0586|consen   60 IIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASG  139 (596)
T ss_pred             eeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccC
Confidence            4678999999999999985  899999986543322  346689999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCcc-------chHH----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFT-------VLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~-------~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.|++||..+......       ++..          .|++||.+||||+.+    .++||+|||++..+.     ....
T Consensus       140 ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~----mnikIaDfgfS~~~~-----~~~~  210 (596)
T KOG0586|consen  140 GELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN----MNIKIADFGFSTFFD-----YGLM  210 (596)
T ss_pred             chhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc----cceeeeccccceeec-----cccc
Confidence            9999999987655432       2222          234667888888876    679999999998763     3445


Q ss_pred             ccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ..+.+|++.|.|||++.+..| ++.+|+||+|+++|-|+.|..||+...                          +...-
T Consensus       211 lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~--------------------------lk~Lr  264 (596)
T KOG0586|consen  211 LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN--------------------------LKELR  264 (596)
T ss_pred             ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc--------------------------ccccc
Confidence            677999999999999998877 589999999999999999999997421                          11111


Q ss_pred             cccccC--CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKD--SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ++.+..  ..|..++.++.+||+++|..+|.+|++++++++
T Consensus       265 ~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  265 PRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             chheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence            222222  235556788999999999999999999999964

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=9.2e-33  Score=252.41  Aligned_cols=227  Identities=14%  Similarity=0.189  Sum_probs=166.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|...  +..+++|..........+.+.+|+++++.++||||+++++++...+..++||||+++|+|
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l   89 (282)
T cd06643          10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV   89 (282)
T ss_pred             HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcH
Confidence            467999999999999986  456677665444444567788999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNP-RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~-~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      ..++... ....+..+..                 .|.+|+|+||+++..    ..+||+|||++.....    ......
T Consensus        90 ~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~----~~~kl~dfg~~~~~~~----~~~~~~  161 (282)
T cd06643          90 DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLD----GDIKLADFGVSAKNTR----TIQRRD  161 (282)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccC----CCEEEccccccccccc----cccccc
Confidence            9988652 2333332222                 233566888888776    5599999999876422    112233


Q ss_pred             ccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          237 KIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ...|++.|+|||++.     +..++.++|||||||++|||++|++||.....           .+........       
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----------~~~~~~~~~~-------  223 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-----------MRVLLKIAKS-------  223 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-----------HHHHHHHhhc-------
Confidence            457899999999874     34578899999999999999999999863211           1111111100       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..+  ....+..++..+.+||.+||+.||.+||++.++++
T Consensus       224 -~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         224 -EPP--TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             -CCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             000  11123345678999999999999999999998864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=6.3e-33  Score=252.46  Aligned_cols=230  Identities=18%  Similarity=0.273  Sum_probs=169.6

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ...||+|+||.||+|+..       .+.+++|........ ..+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   89 (275)
T cd05046          10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEY   89 (275)
T ss_pred             eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEe
Confidence            467899999999999963       356777765443332 356799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC---------CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccccc
Q 016850          169 VSGANLADCLRNPR---------NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       169 ~~~gsL~~~l~~~~---------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      +++|+|.+++....         ......+..                 .|++|+|.||+++..    ..++|+|||+++
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~----~~~~l~~~~~~~  165 (275)
T cd05046          90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQ----REVKVSLLSLSK  165 (275)
T ss_pred             cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCC----CcEEEccccccc
Confidence            99999999997654         333333222                 234567899999876    559999999987


Q ss_pred             ccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHH
Q 016850          223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       223 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      ....   ..........++..|+|||.+.+..++.++||||||+++|+|++ |..||......        .....    
T Consensus       166 ~~~~---~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--------~~~~~----  230 (275)
T cd05046         166 DVYN---SEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--------EVLNR----  230 (275)
T ss_pred             ccCc---ccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--------HHHHH----
Confidence            5321   11122334456788999999988888999999999999999999 78888532110        11110    


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      .          .........+..++..+.+++.+||+.||.+||++.+++..|.
T Consensus       231 ~----------~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         231 L----------QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             H----------HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            0          0011111112235568999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.2e-32  Score=247.86  Aligned_cols=225  Identities=20%  Similarity=0.318  Sum_probs=171.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-----ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-----LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|...  ++.|++|.......     ...+.+.+|+++++.++|+||+++++++.+++.+++||||+
T Consensus         5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   84 (258)
T cd06632           5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELV   84 (258)
T ss_pred             cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEec
Confidence            467899999999999985  78899998654332     13467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++++|.+++..........+..+                 |.+|+|+||+++.+    ..+||+|||++.......    
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~----~~~kl~d~~~~~~~~~~~----  156 (258)
T cd06632          85 PGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTN----GVVKLADFGMAKQVVEFS----  156 (258)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEEccCccceeccccc----
Confidence            99999999987654444433322                 23566999999876    569999999987643211    


Q ss_pred             ccccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                       ......|+..|+|||.+.... ++.++|+||||+++|+|++|+.||.....           .......          
T Consensus       157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----------~~~~~~~----------  214 (258)
T cd06632         157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-----------VAAVFKI----------  214 (258)
T ss_pred             -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----------HHHHHHH----------
Confidence             234466899999999887766 89999999999999999999999863221           0111110          


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ......+..+..+++.+.+++.+||+.+|.+||++.++++
T Consensus       215 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         215 -GRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             -HhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence             0001112234456788999999999999999999999975

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5e-34  Score=248.77  Aligned_cols=240  Identities=18%  Similarity=0.190  Sum_probs=189.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc---HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD---LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|.||+|-+++-+  ++.+|+|+++...-..   ...-..|-.+|+..+||.+..|--.|...+++|+||||+.|
T Consensus       173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG  252 (516)
T KOG0690|consen  173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG  252 (516)
T ss_pred             HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence            467899999999999886  8899999876543332   34455688999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccc-------hHHHHH----------HhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTV-------LSTWLS----------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~-------~~~~~~----------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.|+-+|...+.+.+..       +...+.          |||.+|.|||.+    +++||+|||+.+.    .......
T Consensus       253 GeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkD----GHIKitDFGLCKE----~I~~g~t  324 (516)
T KOG0690|consen  253 GELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKD----GHIKITDFGLCKE----EIKYGDT  324 (516)
T ss_pred             ceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccC----CceEeeecccchh----cccccce
Confidence            99999998766554333       222333          445666666666    6799999999875    2234456


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ..++||||.|+|||++....|+.++|.|.+||++|||++|+.||.....+.        +.+    .+          +-
T Consensus       325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k--------LFe----LI----------l~  382 (516)
T KOG0690|consen  325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK--------LFE----LI----------LM  382 (516)
T ss_pred             eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH--------HHH----HH----------Hh
Confidence            678999999999999999999999999999999999999999997543211        111    11          11


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCC--ChHHHHHHHHHHHHHhhhhhhhc
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP--DMRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      .  ...+|...+++++.|+..+|.+||++|.  ...++.+.++.-+....+|....
T Consensus       383 e--d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~  436 (516)
T KOG0690|consen  383 E--DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATY  436 (516)
T ss_pred             h--hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHH
Confidence            1  1246778889999999999999999997  47888888999999999998764

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.8e-33  Score=252.24  Aligned_cols=227  Identities=15%  Similarity=0.215  Sum_probs=170.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||.|+||.||+|.+.  +..+++|..........+.+.+|++++++++||||+++++++.+++..++||||+++|+|
T Consensus        10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (280)
T cd06611          10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGAL   89 (280)
T ss_pred             HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcH
Confidence            467999999999999985  678888887665555667899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ......+..+                 |.+|+|+||+++.+    ..++|+|||++.....    ......
T Consensus        90 ~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~----~~~~l~d~g~~~~~~~----~~~~~~  161 (280)
T cd06611          90 DSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLD----GDVKLADFGVSAKNKS----TLQKRD  161 (280)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCC----CCEEEccCccchhhcc----cccccc
Confidence            99987643 3443333322                 23566889898876    5699999999876422    112233


Q ss_pred             ccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          237 KIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ...|++.|+|||++.     ...++.++|||||||++|||++|+.||.....           ..........       
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~-------  223 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----------MRVLLKILKS-------  223 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----------HHHHHHHhcC-------
Confidence            456899999999875     33467899999999999999999999863211           0111111100       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..+  ....+..++..+.+++.+||+.||.+||++.++++
T Consensus       224 -~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         224 -EPP--TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             -CCC--CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence             000  11123345678999999999999999999999965

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.8e-32  Score=246.73  Aligned_cols=226  Identities=16%  Similarity=0.215  Sum_probs=171.2

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||.|+||.||.++.  .++.+++|......  .....++.+|++++++++|+||+++++++.+.+.+++||||+++|
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (256)
T cd08221           5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG   84 (256)
T ss_pred             eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence            46789999999988877  47888888865443  234567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++....  .....++..+                 |.+|+|.||+++++    ..+||+|||++.......    .
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~----~~~kl~d~~~~~~~~~~~----~  156 (256)
T cd08221          85 TLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA----GLIKLGDFGISKILGSEY----S  156 (256)
T ss_pred             cHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCC----CCEEECcCcceEEccccc----c
Confidence            9999997652  2333322222                 33566999999886    559999999997653211    1


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|++.|+|||++.+..++.++||||||+++|||++|..||.....           .+......           
T Consensus       157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----------~~~~~~~~-----------  214 (256)
T cd08221         157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----------LNLVVKIV-----------  214 (256)
T ss_pred             cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHH-----------
Confidence            23456789999999999888889999999999999999999999853211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      .... ...+..++.++.+++.+||..||.+||++.++++.
T Consensus       215 ~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         215 QGNY-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             cCCC-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            1111 11223456789999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=7.8e-33  Score=251.10  Aligned_cols=231  Identities=16%  Similarity=0.218  Sum_probs=158.2

Q ss_pred             ccccCCCceEEEEEEC-Cc---eEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR-GK---DVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~-~~---~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||+|... +.   .+++|....... ...+.+.+|+.+++.++||||+++++.+.+....|+||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            5899999999999763 22   344555433322 245689999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCC----CCccc-------hHH----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          174 LADCLRNPRN----PSFTV-------LST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       174 L~~~l~~~~~----~~~~~-------~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |.+++.....    .....       +..          .|++|+|+|||++.+    +.+||+|||++.....  ....
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~----~~~~l~Dfg~~~~~~~--~~~~  155 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD----LTVKVGDYGIGPSRYK--EDYI  155 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC----ccEEecccccccccCc--chhh
Confidence            9999976421    11111       111          234667888888776    5699999999864211  1111


Q ss_pred             ccccccCCCccccchhhhcC-------CCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          233 GKVNKIEGTRGYMAPEFQAS-------GVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                      .......|+..|+|||++..       ..++.++|||||||++|||++ |..||.....           .+.....+.+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----------~~~~~~~~~~  224 (268)
T cd05086         156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----------REVLNHVIKD  224 (268)
T ss_pred             hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----------HHHHHHHHhh
Confidence            12234568899999998743       235789999999999999997 5667743211           1111111111


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      .   .....++..    +....+.+.+++..|| .+|++||++.+|++.|
T Consensus       225 ~---~~~~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         225 Q---QVKLFKPQL----ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             c---ccccCCCcc----CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence            1   111112222    2235567889999999 6799999999998876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.1e-32  Score=248.27  Aligned_cols=222  Identities=22%  Similarity=0.255  Sum_probs=160.7

Q ss_pred             cccccCCCceEEEEEECCce------------EEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           98 KKFTSSSASASWRGTIRGKD------------VIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~------------v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      +.||+|+||.||+|.+.+..            +++|........ ...+.+|+.+|++++||||+++++++.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            35899999999999996433            556654333222 6788999999999999999999999988 778999


Q ss_pred             EeccCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCC---CccceEEccccccccc
Q 016850          166 YEHVSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENA---GSLCAKICHFGTAELC  224 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~---~~~~~kl~DFG~a~~~  224 (381)
                      |||+++|+|.+++.... ..+...+..                 .|++|+|+||+++..+.   .-..+||+|||++...
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence            99999999999998755 344333222                 23456788888887631   1125999999998764


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCC--CCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASG--VVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      ..        .....++..|+|||++.+.  .++.++|||||||++|||++ |..||......        ......   
T Consensus       159 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--------~~~~~~---  219 (259)
T cd05037         159 LS--------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--------EKERFY---  219 (259)
T ss_pred             cc--------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--------hHHHHH---
Confidence            21        2234577889999998876  78999999999999999999 57776532110        000000   


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                                 .....   .+......+.+++.+||..||.+||++.++++.|
T Consensus       220 -----------~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         220 -----------QDQHR---LPMPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             -----------hcCCC---CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence                       00000   0111126899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=7.2e-33  Score=252.17  Aligned_cols=223  Identities=19%  Similarity=0.269  Sum_probs=160.0

Q ss_pred             ccccCCCceEEEEEEC--------------------------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceE
Q 016850           99 KFTSSSASASWRGTIR--------------------------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKL  152 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--------------------------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l  152 (381)
                      .||+|+||.||+|.+.                          ...|++|+...........+.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5899999999999852                          12466666543333334568889999999999999999


Q ss_pred             EEEEEeCCeeeEEEeccCCCCHHHHhcCC-CCCCccchHH-----------------HHHHhhhcceeecccCC---Ccc
Q 016850          153 LGACVSGNCGYLVYEHVSGANLADCLRNP-RNPSFTVLST-----------------WLSRMQSSSIIVSEENA---GSL  211 (381)
Q Consensus       153 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~---~~~  211 (381)
                      ++++.+.+..++||||+++|+|..++... ...+......                 +|++|+|+||+++..+.   ...
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~  161 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSP  161 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccc
Confidence            99999999999999999999999999753 3334333322                 23456789998876431   123


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHH-HhCCccccccccCCcccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLEL-LSGEEVLKFVFDEGIDGY  289 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~el-ltg~~pf~~~~~~~~~~~  289 (381)
                      .+|++|||++.....        .....++..|+|||.+.+ ..++.++|||||||++||+ ++|+.||......     
T Consensus       162 ~~kl~d~g~~~~~~~--------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----  228 (274)
T cd05076         162 FIKLSDPGVSFTALS--------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS-----  228 (274)
T ss_pred             eeeecCCcccccccc--------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH-----
Confidence            489999998864311        122457888999998865 5689999999999999998 4789988632211     


Q ss_pred             cchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          290 RRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                         ....               .+...  ...+....+.+.++|.+||+.+|++||++.+|++.|
T Consensus       229 ---~~~~---------------~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         229 ---EKER---------------FYEKK--HRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             ---HHHH---------------HHHhc--cCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence               0000               00000  011222345789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.2e-32  Score=250.24  Aligned_cols=235  Identities=16%  Similarity=0.259  Sum_probs=169.8

Q ss_pred             CCcccccccCCCceEEEEEEC--CceEEEEEecccccc----------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe
Q 016850           94 NFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL----------DLEQLRERLSVICRSHHSSLIKLLGACVSGNC  161 (381)
Q Consensus        94 ~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~----------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~  161 (381)
                      ++..+.||+|+||.||+|...  ++.+++|........          ..+.+.+|++++++++||||+++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            345678999999999999874  788999876432111          13467889999999999999999999999999


Q ss_pred             eeEEEeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccccccccc
Q 016850          162 GYLVYEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       162 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      .++||||+++|+|.+++..........+..+                 |.+|+|+||+++.+    ..++|+|||+++..
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~----~~~~l~d~~~~~~~  158 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDAD----GICKISDFGISKKS  158 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCC----CeEEEeeccccccc
Confidence            9999999999999999987655544433322                 23456888888765    56999999998764


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCC--CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      ....  .........|+..|+|||.+....  ++.++||||||+++||+++|..||.....           ........
T Consensus       159 ~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~  225 (272)
T cd06629         159 DDIY--DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----------IAAMFKLG  225 (272)
T ss_pred             cccc--cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----------HHHHHHhh
Confidence            3211  111223456899999999887654  78999999999999999999999853211           01011100


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .   ..    ............++..+.+++.+||..||.+||++.+|++
T Consensus       226 ~---~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         226 N---KR----SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             c---cc----cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            0   00    0011111122235678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.5e-32  Score=247.12  Aligned_cols=225  Identities=19%  Similarity=0.254  Sum_probs=169.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||++...  ++.+++|......  ......+.+|+++|++++||||+++++.+...+..++||||++++
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08220           5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG   84 (256)
T ss_pred             EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence            467899999999999874  7888898875432  224567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCC--CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPRN--PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~~--~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++.....  .....+..++                 .+|+|.||++++.+   ..+||+|||++......     .
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~---~~~~l~d~~~~~~~~~~-----~  156 (256)
T cd08220          85 TLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK---MVVKIGDFGISKILSSK-----S  156 (256)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC---CEEEEccCCCceecCCC-----c
Confidence            99999976432  3333333222                 24568899987643   56899999999865321     1


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||.....           ........           
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----------~~~~~~~~-----------  214 (256)
T cd08220         157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----------PALVLKIM-----------  214 (256)
T ss_pred             cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----------HHHHHHHH-----------
Confidence            22335689999999999888889999999999999999999999853211           01111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      . ......+..++..+.+++.+||+.||.+|||+.|+++
T Consensus       215 ~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         215 S-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             h-cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            0 1111223346778999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.9e-32  Score=248.04  Aligned_cols=229  Identities=14%  Similarity=0.207  Sum_probs=168.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-----cHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-----DLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~  166 (381)
                      ..+.||+|+||.||+|...  +..|++|........     ..+.+.+|+.++++++||||+++++++.+.  ..+++||
T Consensus         6 ~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~   85 (265)
T cd06652           6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFM   85 (265)
T ss_pred             EeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEE
Confidence            4567899999999999974  678999876543211     245788899999999999999999988763  5688999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++|+|.+++.............+                 |.+|+|.||+++++    +.++|+|||+++.+.....
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~----~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          86 EHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSV----GNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCC----CCEEECcCccccccccccc
Confidence            99999999999976554443333222                 23566899998876    5699999999876432111


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                       .........|+..|+|||++.+..++.++|||||||++|||++|+.||.....           .......        
T Consensus       162 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----------~~~~~~~--------  221 (265)
T cd06652         162 -SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-----------MAAIFKI--------  221 (265)
T ss_pred             -cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-----------HHHHHHH--------
Confidence             11122345689999999999888899999999999999999999999853211           0111111        


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         ......+..+...+..+.+++.+||. +|++||+++++++
T Consensus       222 ---~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         222 ---ATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             ---hcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence               11111233455677889999999995 9999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.5e-32  Score=252.25  Aligned_cols=227  Identities=15%  Similarity=0.202  Sum_probs=168.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||.|+||.||+|...  +..+++|..........+.+.+|+++++.++||||+++++++..++.+++||||+++++|
T Consensus        17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l   96 (292)
T cd06644          17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV   96 (292)
T ss_pred             hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcH
Confidence            567999999999999985  678888887655544567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNP-RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~-~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      ..++.+. .......+..                 +|++|+|+||+++.+    +.+||+|||++.....    ......
T Consensus        97 ~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~----~~~kl~dfg~~~~~~~----~~~~~~  168 (292)
T cd06644          97 DAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLD----GDIKLADFGVSAKNVK----TLQRRD  168 (292)
T ss_pred             HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCC----CCEEEccCccceeccc----cccccc
Confidence            9887643 2333333222                 234567999999776    5699999999865321    112233


Q ss_pred             ccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          237 KIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ...+++.|+|||++.     ...++.++|||||||++|||++|..||.....           ..........       
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~-------  230 (292)
T cd06644         169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----------MRVLLKIAKS-------  230 (292)
T ss_pred             eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----------HHHHHHHhcC-------
Confidence            456899999999874     34468899999999999999999999853211           0111111100       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..+  ....+..++.++.+++.+||+.||++||++.++++
T Consensus       231 -~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         231 -EPP--TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             -CCc--cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             000  11123345678999999999999999999999965

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.9e-32  Score=247.80  Aligned_cols=224  Identities=17%  Similarity=0.178  Sum_probs=160.7

Q ss_pred             cccccCCCceEEEEEECC--------------ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeee
Q 016850           98 KKFTSSSASASWRGTIRG--------------KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~--------------~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~  163 (381)
                      +.||+|+||.||+|++..              ..|++|............+.+|+.+++.++|||||++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            358999999999998632              246777654443334567888999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCC---CccceEEccccccc
Q 016850          164 LVYEHVSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENA---GSLCAKICHFGTAE  222 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~---~~~~~kl~DFG~a~  222 (381)
                      +||||+++|+|..++.... ......+..                 +|++|+|.|||++..+.   ....+|++|||++.
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~  160 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI  160 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence            9999999999999987543 333333222                 23456799999976431   11248999999986


Q ss_pred             ccccCCCCccccccccCCCccccchhhhc-CCCCCcchhHHHHHHHHHHHH-hCCccccccccCCcccccchhHHHHHHH
Q 016850          223 LCGEVSGNESGKVNKIEGTRGYMAPEFQA-SGVVTQKCDVYAFGVVVLELL-SGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       223 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDIwSlGvil~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      ....        .....|+..|+|||.+. +..++.++|||||||++|||+ .|..||.....           .+. ..
T Consensus       161 ~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----------~~~-~~  220 (262)
T cd05077         161 TVLS--------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-----------AEK-ER  220 (262)
T ss_pred             cccC--------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-----------hHH-HH
Confidence            5421        12346788999999886 456899999999999999997 58888753211           000 00


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      ..           .....  ......+.+.+||.+||+.||.+||++.+|++.+
T Consensus       221 ~~-----------~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         221 FY-----------EGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HH-----------hcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            00           00011  0112346789999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.4e-32  Score=248.46  Aligned_cols=234  Identities=15%  Similarity=0.204  Sum_probs=174.6

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||.|+||.||+|+..  ++.+++|.......   ...+.+.+|+++++.++||||+++++++.+++.+++||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            699999999999997  88999998754332   2356799999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++..........+..+                 |.+|+|.||+++.+    ..++|+|||++......     .....
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~----~~~~l~df~~~~~~~~~-----~~~~~  151 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN----GYVKLVDFGFAKKLKSG-----QKTWT  151 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC----CCEEEeeCCcccccCcc-----ccccc
Confidence            999987655554443322                 23456899999876    56999999999865321     12234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ..|+..|++||.+.+..++.++||||||+++|+|++|..||.....+         ......           .......
T Consensus       152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~-----------~~~~~~~  211 (262)
T cd05572         152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---------PMEIYN-----------DILKGNG  211 (262)
T ss_pred             ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---------HHHHHH-----------HHhccCC
Confidence            56899999999998888999999999999999999999999643210         011111           1111111


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhh
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~  365 (381)
                      ...++...++.+.+++.+||+.||++||+     +.|+++   .-+....+|+
T Consensus       212 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~---~~~~~~~~~~  261 (262)
T cd05572         212 KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK---HKWFNGFDWE  261 (262)
T ss_pred             CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc---ChhhhCCCCC
Confidence            22334445788999999999999999999     555543   3334344554

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.9e-32  Score=246.62  Aligned_cols=226  Identities=16%  Similarity=0.244  Sum_probs=169.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e~~~  170 (381)
                      ..+.||+|++|.||++...  ++.+++|+......  ...+.+.+|++++++++|+||+++++.+.. +..+++||||++
T Consensus         4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (257)
T cd08223           4 FVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCE   83 (257)
T ss_pred             EEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccC
Confidence            3567899999999999885  67899988754332  245678899999999999999999998764 456899999999


Q ss_pred             CCCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +++|.+++....  ..+..++..+                 |.+|+|+||+++..    ..++|+|||++.....    .
T Consensus        84 ~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~----~~~~l~df~~~~~~~~----~  155 (257)
T cd08223          84 GGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT----NIIKVGDLGIARVLEN----Q  155 (257)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecC----CcEEEecccceEEecc----c
Confidence            999999997632  2333333322                 23566888888776    5699999999976532    1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........|++.|+|||++.+..++.++||||||+++++|++|+.||.....           .........        
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----------~~~~~~~~~--------  216 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----------NSLVYRIIE--------  216 (257)
T ss_pred             CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHHh--------
Confidence            1223346689999999999988899999999999999999999999863211           111111111        


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          ...+..+..+++.+.+++.+||+.||++||++.++++
T Consensus       217 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         217 ----GKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             ----cCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                1112234456788999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.9e-32  Score=253.05  Aligned_cols=234  Identities=19%  Similarity=0.263  Sum_probs=168.3

Q ss_pred             ccccccCCCceEEEEEEC--Cc----eEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GK----DVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~----~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+.  +.    .+++|........ ....+.+|+.++++++||||+++++++... ..++|+||+
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~   90 (303)
T cd05110          12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLM   90 (303)
T ss_pred             ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehhc
Confidence            467999999999999873  33    4567765433222 234688999999999999999999998764 467999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..                 +|++|+|.||+++++    ..+||+|||+++.+....  .
T Consensus        91 ~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~----~~~kL~Dfg~~~~~~~~~--~  164 (303)
T cd05110          91 PHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSP----NHVKITDFGLARLLEGDE--K  164 (303)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCC----CceEEccccccccccCcc--c
Confidence            9999999997643 233332222                 334667999999776    459999999998653211  1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........++..|+|||++.+..++.++|||||||++|||++ |+.||.....            ......+        
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~------------~~~~~~~--------  224 (303)
T cd05110         165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT------------REIPDLL--------  224 (303)
T ss_pred             ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH------------HHHHHHH--------
Confidence            111223446789999999988889999999999999999997 8888853211            0011111        


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                         ........+..++..+.+++.+||..||++||++.++++.|+++...
T Consensus       225 ---~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         225 ---EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             ---HCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence               11111112223456789999999999999999999999999987544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=3.3e-32  Score=245.99  Aligned_cols=230  Identities=20%  Similarity=0.315  Sum_probs=172.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|...  ++.+++|........  ..+.+.+|++++++++|+||+++++++.+.+.+++|+||++++
T Consensus         5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (264)
T cd06626           5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG   84 (264)
T ss_pred             eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence            467899999999999874  788999987655443  5678999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++..........+..+                 |.+|+|.||++++.    ..+||+|||++..............
T Consensus        85 ~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~----~~~kl~d~g~~~~~~~~~~~~~~~~  160 (264)
T cd06626          85 TLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN----GVIKLGDFGCAVKLKNNTTTMGEEV  160 (264)
T ss_pred             cHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEEcccccccccCCCCCcccccc
Confidence            99999987654444433322                 23566999999886    5699999999987543221111112


Q ss_pred             cccCCCccccchhhhcCCC---CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          236 NKIEGTRGYMAPEFQASGV---VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~---~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ....++..|+|||++.+..   ++.++||||||+++|++++|+.||......          ........          
T Consensus       161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~----------~~~~~~~~----------  220 (264)
T cd06626         161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE----------FQIMFHVG----------  220 (264)
T ss_pred             cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch----------HHHHHHHh----------
Confidence            3456889999999988766   789999999999999999999999632110          00000000          


Q ss_pred             hcccccCCCCH--HHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPV--EVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .......+.  .++..+.+++.+||+.||.+||++.+++.
T Consensus       221 --~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         221 --AGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             --cCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence              001111222  23678899999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.5e-32  Score=247.29  Aligned_cols=225  Identities=17%  Similarity=0.272  Sum_probs=171.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||++...  ++.+++|......  ....+++.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus         5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (256)
T cd08218           5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG   84 (256)
T ss_pred             EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence            567999999999999884  7889999875432  224567899999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++....  ..+..++..|+                 .+|+|.||+++.+    ..++|+|||++.....    ...
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~----~~~~l~d~~~~~~~~~----~~~  156 (256)
T cd08218          85 DLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD----GTIKLGDFGIARVLNS----TVE  156 (256)
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC----CCEEEeeccceeecCc----chh
Confidence            9999997643  23333333332                 2455899999876    4599999999976432    111


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|++.|+|||++.+..++.++|||||||++++|++|+.||....           ..+.......+         
T Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----------~~~~~~~~~~~---------  216 (256)
T cd08218         157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----------MKNLVLKIIRG---------  216 (256)
T ss_pred             hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----------HHHHHHHHhcC---------
Confidence            2234568999999999988889999999999999999999999985321           11111111111         


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .....+...+..+.++|.+||+.+|.+||++.+|++
T Consensus       217 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         217 ---SYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             ---CCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence               111233455678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=3.1e-32  Score=248.36  Aligned_cols=224  Identities=19%  Similarity=0.290  Sum_probs=169.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.|+||.||+|...  +..+|+|........ ..+.+.+|+.++.+++||||+++++++.+++..++||||+++|+
T Consensus         9 ~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   88 (277)
T cd06641           9 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS   88 (277)
T ss_pred             heeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCc
Confidence            467999999999999874  678888876543322 34678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.... .....+..+                 |.+|+|.||+++.+    +.++|+|||++..+..    ......
T Consensus        89 l~~~i~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~----~~~~l~dfg~~~~~~~----~~~~~~  159 (277)
T cd06641          89 ALDLLEPGP-LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH----GEVKLADFGVAGQLTD----TQIKRN  159 (277)
T ss_pred             HHHHHhcCC-CCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC----CCEEEeecccceeccc----chhhhc
Confidence            999987543 333332222                 23566999999876    5599999999876532    111223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...|+..|+|||++.+..++.++|||||||++|+|++|..||.....           ...... +           ...
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~-~-----------~~~  216 (277)
T cd06641         160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----------MKVLFL-I-----------PKN  216 (277)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----------HHHHHH-H-----------hcC
Confidence            45689999999999888889999999999999999999999853211           000000 0           111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+..+..++..+.+++.+||+.+|.+||++.++++
T Consensus       217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         217 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            112223345678999999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.1e-32  Score=253.37  Aligned_cols=225  Identities=20%  Similarity=0.293  Sum_probs=169.4

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      ..||+|+||.||++...  +..|++|+.........+.+.+|+.++++++|+||+++++.+..++..++||||+++++|.
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            56999999999999874  7889999876554445677899999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccccc
Q 016850          176 DCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKI  238 (381)
Q Consensus       176 ~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  238 (381)
                      +++.... .....+..                 .|++|+|+||+++++    ..++|+|||++.....    ........
T Consensus       108 ~~~~~~~-l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~----~~~kL~dfg~~~~~~~----~~~~~~~~  178 (292)
T cd06658         108 DIVTHTR-MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD----GRIKLSDFGFCAQVSK----EVPKRKSL  178 (292)
T ss_pred             HHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC----CCEEEccCcchhhccc----ccccCcee
Confidence            9986543 33332222                 234567888888876    5699999999875432    11122345


Q ss_pred             CCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc
Q 016850          239 EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK  318 (381)
Q Consensus       239 ~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (381)
                      .|+..|+|||++.+..++.++||||||+++|||++|+.||.....        ........           ........
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~-----------~~~~~~~~  239 (292)
T cd06658         179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP--------LQAMRRIR-----------DNLPPRVK  239 (292)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHH-----------hcCCCccc
Confidence            689999999999888899999999999999999999999863211        00000000           00111111


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          319 DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .....+..+.+++.+||..||.+|||+.++++
T Consensus       240 --~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         240 --DSHKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             --cccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence              11235667999999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=4.5e-33  Score=250.93  Aligned_cols=231  Identities=20%  Similarity=0.301  Sum_probs=169.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc--HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD--LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~--~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||+||+++..  ++.+|+|+........  .....+|+.++++++||||+++++++.+....++||||++++
T Consensus         4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~   83 (260)
T PF00069_consen    4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG   83 (260)
T ss_dssp             EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred             eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence            467999999999999996  5579999876655442  223456999999999999999999999999999999999988


Q ss_pred             CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.++|..........+..++.                 +|+|.||+++.+    ..++|+|||.+...    .......
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~----~~~~l~Dfg~~~~~----~~~~~~~  155 (260)
T PF00069_consen   84 SLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDEN----GEVKLIDFGSSVKL----SENNENF  155 (260)
T ss_dssp             BHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT----SEEEESSGTTTEES----TSTTSEB
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccccccccccc----ccccccc
Confidence            9999998545544444333322                 456899999866    56999999998753    1223344


Q ss_pred             cccCCCccccchhhhc-CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQA-SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~-~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....++..|+|||++. +..++.++||||||+++|+|++|..||.....        .............       ...
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--------~~~~~~~~~~~~~-------~~~  220 (260)
T PF00069_consen  156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--------DDQLEIIEKILKR-------PLP  220 (260)
T ss_dssp             SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--------HHHHHHHHHHHHT-------HHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc--------hhhhhhhhhcccc-------ccc
Confidence            5677899999999998 78899999999999999999999999974310        0111111111100       000


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....  ........+.+++.+||+.||++||++.++++
T Consensus       221 ~~~~--~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  221 SSSQ--QSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHTT--SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cccc--ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000  00011378999999999999999999999975

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=8.7e-33  Score=249.55  Aligned_cols=225  Identities=16%  Similarity=0.253  Sum_probs=168.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~  170 (381)
                      ...||.|+||.||++...  ++.+++|.......  ...+++.+|++++++++||||+++++++..  ....+++|||++
T Consensus         5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~   84 (265)
T cd08217           5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCE   84 (265)
T ss_pred             eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhcc
Confidence            467899999999999874  67888887654322  245678899999999999999999998764  456899999999


Q ss_pred             CCCHHHHhcCC----CCCCccch-------H---------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          171 GANLADCLRNP----RNPSFTVL-------S---------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       171 ~gsL~~~l~~~----~~~~~~~~-------~---------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      +++|.+++...    .......+       .               .+|.+|+|.||++++.    ..+||+|||++...
T Consensus        85 ~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~----~~~kl~d~g~~~~~  160 (265)
T cd08217          85 GGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN----NNVKLGDFGLAKIL  160 (265)
T ss_pred             CCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC----CCEEEecccccccc
Confidence            99999998653    22222211       1               2334566899999876    56999999999875


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                      ..    .........|++.|+|||++.+..++.++||||||+++|+|++|+.||.....        ....    +.   
T Consensus       161 ~~----~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~----~~---  221 (265)
T cd08217         161 GH----DSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLA----SK---  221 (265)
T ss_pred             cC----CcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHH----HH---
Confidence            32    11113345689999999999888899999999999999999999999863211        0111    11   


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              +........+...+..+.+++.+||+.+|++||++.+|++
T Consensus       222 --------~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         222 --------IKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             --------HhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                    1111122334566788999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-34  Score=270.33  Aligned_cols=252  Identities=17%  Similarity=0.226  Sum_probs=181.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv~  166 (381)
                      ..+.||+|+||.||+|+++  |+.||||.++.... ...+..-+|+++|++|+|+|||+++++=++.      ....+||
T Consensus        17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            3567999999999999985  89999998765433 3578899999999999999999999985543      3468999


Q ss_pred             eccCCCCHHHHhcCCC---CCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccccccccc
Q 016850          167 EHVSGANLADCLRNPR---NPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~---~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      |||.+|||...|....   ++++..++                 ++|+||||.||++-....+....||+|||.|+.+. 
T Consensus        97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~-  175 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD-  175 (732)
T ss_pred             eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC-
Confidence            9999999999998643   44544433                 34568889999987766555678999999999864 


Q ss_pred             CCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                          ........+||+.|++||++.. +.|+..+|.|||||++|+++||..||.........       .+..+..+...
T Consensus       176 ----d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~-------~~~~~~~~tkk  244 (732)
T KOG4250|consen  176 ----DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN-------KEIMWHIITKK  244 (732)
T ss_pred             ----CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc-------chhhhhhhccC
Confidence                3336788999999999999984 78899999999999999999999999754332111       11111111111


Q ss_pred             ccchhhhhccc--------ccCCC----CHHHHHHHHHHHHHhhccCCCCCC--ChHHHHHHHHHHHH
Q 016850          306 VGGVRKWVDRR--------LKDSY----PVEVAEKMVLLGLQCVDEDPGKRP--DMRQVTGLVSKMYL  359 (381)
Q Consensus       306 ~~~~~~~~~~~--------~~~~~----~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~~~~  359 (381)
                      ...+.-...+.        ...++    .......+-..+..+|..+|++|.  ...+.-..+.+++.
T Consensus       245 p~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  245 PSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             CCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence            11111101111        11111    233445667788889999999999  66666666666654

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=6.6e-33  Score=259.40  Aligned_cols=231  Identities=16%  Similarity=0.169  Sum_probs=164.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+++++  ++.+|+|+.....   ......+.+|+.++..++|+||+++++++.+.+.+|+||||++
T Consensus         5 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~   84 (332)
T cd05623           5 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYV   84 (332)
T ss_pred             EEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccC
Confidence            3567999999999999986  5678888764321   1134457889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++... .......+..+                 |++|+|+|||++.+    +.+||+|||++..+..   ...
T Consensus        85 ~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~----~~~kL~DfG~a~~~~~---~~~  157 (332)
T cd05623          85 GGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN----GHIRLADFGSCLKLME---DGT  157 (332)
T ss_pred             CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCC----CCEEEeecchheeccc---CCc
Confidence            99999999763 33443333222                 34677999999876    5699999999875422   111


Q ss_pred             ccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          233 GKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                      .......||+.|+|||++.     ...++.++|||||||++|||++|+.||....           ..+........ ..
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----------~~~~~~~i~~~-~~  225 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----------LVETYGKIMNH-KE  225 (332)
T ss_pred             ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----------HHHHHHHHhCC-Cc
Confidence            2223467999999999886     3468899999999999999999999996321           11111111110 00


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHH
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTG  352 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~  352 (381)
                      .      .. .+.....+++.+.+|+.+||..++.+  |+++.++++
T Consensus       226 ~------~~-~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~  265 (332)
T cd05623         226 R------FQ-FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ  265 (332)
T ss_pred             c------cc-CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence            0      00 01112345788999999999765444  678777754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.4e-32  Score=251.65  Aligned_cols=223  Identities=16%  Similarity=0.178  Sum_probs=164.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||+||+|.+.  ++.+|+|.......   .....+.+|+++|++++|+||+++++.+..++..++||||+++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   84 (285)
T cd05632           5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG   84 (285)
T ss_pred             EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence            356899999999999985  77899988654322   2345578899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+++....  ..+...+..                 +|++|+|.||++++.    ..+||+|||++.....     .
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~----~~~kl~Dfg~~~~~~~-----~  155 (285)
T cd05632          85 GDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY----GHIRISDLGLAVKIPE-----G  155 (285)
T ss_pred             ccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC----CCEEEecCCcceecCC-----C
Confidence            99999886533  334333322                 234566888888876    5599999999876421     1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......|+..|+|||++.+..++.++|||||||++|||++|+.||......        .........+..        
T Consensus       156 ~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--------~~~~~~~~~~~~--------  219 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--------VKREEVDRRVLE--------  219 (285)
T ss_pred             CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhhhc--------
Confidence            1223457999999999998888999999999999999999999999632110        001111111100        


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR  348 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~  348 (381)
                          ....++..++..+.+|+.+||+.||++||++.
T Consensus       220 ----~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05632         220 ----TEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQ  251 (285)
T ss_pred             ----cccccCccCCHHHHHHHHHHccCCHhHcCCCc
Confidence                01122334567789999999999999999943

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.8e-32  Score=249.78  Aligned_cols=225  Identities=18%  Similarity=0.283  Sum_probs=169.7

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      +.||+|++|.||++...  ++.+++|+.........+.+.+|+.+++.++||||+++++++...+..++|+||+++++|.
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~  104 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALT  104 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHH
Confidence            57999999999999874  6789999876554445667899999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccccc
Q 016850          176 DCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKI  238 (381)
Q Consensus       176 ~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  238 (381)
                      +++... ......+..+                 |++|+|.||+++.+    +.++|+|||++.....    ........
T Consensus       105 ~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~~l~d~g~~~~~~~----~~~~~~~~  175 (285)
T cd06648         105 DIVTHT-RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD----GRVKLSDFGFCAQVSK----EVPRRKSL  175 (285)
T ss_pred             HHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC----CcEEEcccccchhhcc----CCcccccc
Confidence            999873 3333332222                 33566999999876    5699999998875432    11122345


Q ss_pred             CCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc
Q 016850          239 EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK  318 (381)
Q Consensus       239 ~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (381)
                      .|++.|+|||.+.+..++.++|||||||++|||++|+.||.....           ..........        ..+.. 
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----------~~~~~~~~~~--------~~~~~-  235 (285)
T cd06648         176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----------LQAMKRIRDN--------LPPKL-  235 (285)
T ss_pred             cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----------HHHHHHHHhc--------CCCCC-
Confidence            689999999999888899999999999999999999999853211           1111111100        00011 


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          319 DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..+..++..+.+++.+||+.||++||++.++++
T Consensus       236 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         236 -KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             -cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence             112235678999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.6e-32  Score=252.78  Aligned_cols=225  Identities=17%  Similarity=0.241  Sum_probs=170.1

Q ss_pred             cccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      ..||+|+||.||+|..  .++.|++|..........+.+.+|+.+++.++||||+++++++..++..++||||+++++|.
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~  106 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT  106 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence            4699999999999987  47899999876555555677899999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccccc
Q 016850          176 DCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKI  238 (381)
Q Consensus       176 ~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  238 (381)
                      +++... ......+..                 .|++|+|+||+++.+    +.+||+|||++..+...    .......
T Consensus       107 ~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~----~~~kL~dfg~~~~~~~~----~~~~~~~  177 (297)
T cd06659         107 DIVSQT-RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD----GRVKLSDFGFCAQISKD----VPKRKSL  177 (297)
T ss_pred             HHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC----CcEEEeechhHhhcccc----cccccce
Confidence            988653 233333222                 233566889999876    56999999998754321    1122346


Q ss_pred             CCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc
Q 016850          239 EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK  318 (381)
Q Consensus       239 ~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (381)
                      .|+..|+|||++.+..++.++|||||||++|||++|+.||.....           ..... .+....         ...
T Consensus       178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----------~~~~~-~~~~~~---------~~~  236 (297)
T cd06659         178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----------VQAMK-RLRDSP---------PPK  236 (297)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHH-HHhccC---------CCC
Confidence            689999999999888899999999999999999999999853211           00000 000000         000


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          319 DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......++..+.+++.+||+.||.+||++.++++
T Consensus       237 ~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         237 LKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             ccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            1112234567899999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=3.2e-32  Score=246.38  Aligned_cols=234  Identities=18%  Similarity=0.300  Sum_probs=172.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||.|+||.||+|...  +..+++|+...... ...+.+.+|+++|+.++|+||+++++.+...+.+++||||++++
T Consensus         5 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~   84 (267)
T cd06610           5 LIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGG   84 (267)
T ss_pred             eeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCC
Confidence            3567999999999999974  67888887654332 25678999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCC---CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          173 NLADCLRNPR---NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       173 sL~~~l~~~~---~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|.+++....   ...+..+..+                 |.+|+|.||+++++    ..++|+|||++..+........
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~----~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          85 SLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGED----GSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             cHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC----CCEEEcccchHHHhccCccccc
Confidence            9999997642   2333333222                 33566999999886    4599999999977543222211


Q ss_pred             ccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......|+..|+|||++... .++.++|+|||||++|+|++|+.||......           ..........      
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-----------~~~~~~~~~~------  223 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-----------KVLMLTLQND------  223 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-----------hhHHHHhcCC------
Confidence            123445689999999998876 7899999999999999999999999633211           0111111100      


Q ss_pred             hhcccccCCC-CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSY-PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .+.+.... ...+++.+.+++.+||+.||++||++.++++
T Consensus       224 --~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         224 --PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             --CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence              00111111 1245678999999999999999999999975

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.1e-33  Score=258.66  Aligned_cols=243  Identities=16%  Similarity=0.220  Sum_probs=167.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+++..  ++.||+|+.....   ....+.+.+|+.++..++|+||+++++++.+++.+|+||||++
T Consensus         5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   84 (331)
T cd05597           5 ILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYV   84 (331)
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCC
Confidence            3567999999999999985  7789999875322   1234568899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++... .......+..++                 ++|+|+|||++.+    +.+||+|||++..+..   ...
T Consensus        85 g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~~~~~~~---~~~  157 (331)
T cd05597          85 GGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKN----GHIRLADFGSCLRLLA---DGT  157 (331)
T ss_pred             CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCC----CCEEEEECCceeecCC---CCC
Confidence            99999999763 334433333322                 3566888888776    5699999999876432   111


Q ss_pred             ccccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          233 GKVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                      .......||+.|+|||++..     ..++.++|||||||++|||++|+.||....           ..+........ ..
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~-----------~~~~~~~i~~~-~~  225 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES-----------LVETYGKIMNH-KE  225 (331)
T ss_pred             ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC-----------HHHHHHHHHcC-CC
Confidence            12233569999999999863     457889999999999999999999996321           11111111110 00


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHHHHHHHHhhhhhhh
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                      .      ..+ +.....+++.+.+++.+||..++++  |+++.++++   .-+.....|...
T Consensus       226 ~------~~~-~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~---hp~~~~~~~~~~  277 (331)
T cd05597         226 H------FQF-PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD---HPFFEGIDWDNI  277 (331)
T ss_pred             c------ccC-CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc---CCCCCCCCHHHH
Confidence            0      001 1111235678999999988653333  667777654   444444444443

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.7e-32  Score=247.69  Aligned_cols=228  Identities=20%  Similarity=0.256  Sum_probs=174.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|++|.||+|++.  ++.+++|+...... .....+.+|+.++.+++|+||+++++++...+.+++||||+++++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS   85 (264)
T ss_pred             eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence            467899999999999985  78899988765543 346789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPRNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++............                  .+|.+|+|+||+++.+    ..++|+|||++.....    .....
T Consensus        86 L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~----~~~~l~df~~~~~~~~----~~~~~  157 (264)
T cd06623          86 LADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSK----GEVKIADFGISKVLEN----TLDQC  157 (264)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCC----CCEEEccCccceeccc----CCCcc
Confidence            99999875544433222                  2344567888888876    5699999999876532    11122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....++..|+|||.+.+..++.++||||||+++|+|++|+.||......        ...+......            .
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~~~------------~  217 (264)
T cd06623         158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--------SFFELMQAIC------------D  217 (264)
T ss_pred             cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--------CHHHHHHHHh------------c
Confidence            3456899999999998888999999999999999999999998643320        1111111111            1


Q ss_pred             cccCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVE-VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+.. ++..+.+++.+||..+|++||++.++++
T Consensus       218 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         218 GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            111222333 6788999999999999999999999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=6.7e-32  Score=246.93  Aligned_cols=243  Identities=16%  Similarity=0.195  Sum_probs=166.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|+..  +..|++|+.......  ..+.+.+|+.++++++||||+++++++.+++.+++||||++ +
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~   83 (285)
T cd07861           5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-M   83 (285)
T ss_pred             eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-C
Confidence            467999999999999984  788999987544322  34678899999999999999999999999999999999996 7


Q ss_pred             CHHHHhcCCC---CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          173 NLADCLRNPR---NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       173 sL~~~l~~~~---~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|.+++....   ......+..+                 |++|+|+||+++++    +.+||+|||++......    .
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~~----~  155 (285)
T cd07861          84 DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNK----GVIKLADFGLARAFGIP----V  155 (285)
T ss_pred             CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCC----CcEEECcccceeecCCC----c
Confidence            9999886532   2333332222                 23566889998876    56999999999765321    1


Q ss_pred             ccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHH---HHHHcCCccc
Q 016850          233 GKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKA---SEAVAGGVGG  308 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  308 (381)
                      .......+++.|+|||++.+. .++.++|||||||++|+|++|++||........    ........   ..........
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  231 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ----LFRIFRILGTPTEDVWPGVTS  231 (285)
T ss_pred             ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHHHhCCCChhhhhcchh
Confidence            122344678999999988654 578999999999999999999999964221000    00000000   0000000000


Q ss_pred             hhh---hhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VRK---WVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~~---~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..   .++....   ......+++++.++|.+||+.||++|||+.+|++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000   0000000   0011235678899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-33  Score=243.25  Aligned_cols=257  Identities=16%  Similarity=0.184  Sum_probs=193.3

Q ss_pred             eeHHHHHHHhcCCcccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeC
Q 016850           83 YHLSEICAATNNFLAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSG  159 (381)
Q Consensus        83 ~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~  159 (381)
                      -.++|+++.|.    +.||+|+||.|--+..  .|.++|||++.......+.++.+|++++.++ .|+||++|+++|+++
T Consensus        73 g~F~d~YkLt~----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   73 GKFEDMYKLTS----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             chHHHHHHhHH----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            34788888874    5699999999987765  5999999998777667889999999999999 599999999999999


Q ss_pred             CeeeEEEeccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccccc
Q 016850          160 NCGYLVYEHVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      ..+|||||-|.||.|..+|++++.+.+..+..                 .|+||||+|||-.+-+.- .-+|||||.+..
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v-sPvKiCDfDLgS  227 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV-SPVKICDFDLGS  227 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc-Cceeeecccccc
Confidence            99999999999999999999988777555433                 345778999987654321 238999999875


Q ss_pred             ccccC---CCCccccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhH
Q 016850          223 LCGEV---SGNESGKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       223 ~~~~~---~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~  294 (381)
                      -....   .........+.+|+..|||||+..     ...|+.++|.||||||+|-|+.|.+||...-+.+..+.....-
T Consensus       228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C  307 (463)
T KOG0607|consen  228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC  307 (463)
T ss_pred             ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence            43211   111122345678999999999753     2358999999999999999999999998766554443332221


Q ss_pred             ---HHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          295 ---VDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       295 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .....+.+..+.   .     .++.+....++.+.++|+..+|..|+..|.++.++++
T Consensus       308 r~CQ~~LFesIQEGk---Y-----eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  308 RVCQNKLFESIQEGK---Y-----EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHHHHHHhccC---C-----cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence               112222221111   1     1122334578999999999999999999999999986

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.8e-32  Score=250.93  Aligned_cols=226  Identities=18%  Similarity=0.280  Sum_probs=169.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||++.+.  +..+++|.+..... .....+.+|++++++++||||+++++.+...+.+++||||+++++
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (286)
T cd06622           6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS   85 (286)
T ss_pred             hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence            467999999999999986  78899987654322 235678999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC---CCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          174 LADCLRNPR---NPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       174 L~~~l~~~~---~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |..++....   ...+..+.                  ..|++|+|+||+++..    ..+||+|||++..+..      
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~------  155 (286)
T cd06622          86 LDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGN----GQVKLCDFGVSGNLVA------  155 (286)
T ss_pred             HHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCC----CCEEEeecCCcccccC------
Confidence            999987631   33332222                  1233566888888875    5699999999876422      


Q ss_pred             ccccccCCCccccchhhhcCC------CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          233 GKVNKIEGTRGYMAPEFQASG------VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~------~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                      .......|++.|+|||++.+.      .++.++|||||||++|+|++|+.||.....        ...........    
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--------~~~~~~~~~~~----  223 (286)
T cd06622         156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--------ANIFAQLSAIV----  223 (286)
T ss_pred             CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--------hhHHHHHHHHh----
Confidence            122345688999999988544      358899999999999999999999953211        01111111111    


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             . ......+..++.++.+++.+||+.+|++||++.++++
T Consensus       224 -------~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         224 -------D-GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             -------h-cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence                   1 1122344557888999999999999999999999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.8e-33  Score=264.61  Aligned_cols=222  Identities=18%  Similarity=0.282  Sum_probs=171.0

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecc----cccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe--eeEEEecc
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKL----RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNC--GYLVYEHV  169 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~----~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~--~~lv~e~~  169 (381)
                      ..||+|+|-+||+|.+.  |-+||--.++.    +.....++|..|+.+|+.|+|||||++|.+|.+...  +-+|+|++
T Consensus        46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~  125 (632)
T KOG0584|consen   46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF  125 (632)
T ss_pred             hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence            45999999999999986  44554322222    223346889999999999999999999999987554  78899999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHHH-------------------HhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWLS-------------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~~-------------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ..|+|..|+++.+....+.+..|.+                   |||-.||+++..-   +.|||+|+|||.....    
T Consensus       126 TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~---G~VKIGDLGLAtl~r~----  198 (632)
T KOG0584|consen  126 TSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL---GEVKIGDLGLATLLRK----  198 (632)
T ss_pred             cCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc---CceeecchhHHHHhhc----
Confidence            9999999999988888777777665                   4568899998754   7899999999988532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                        ......+|||.|||||+.. ..|+..+||||||++++||+|+..||..+...          .+-..+.+        
T Consensus       199 --s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~----------AQIYKKV~--------  257 (632)
T KOG0584|consen  199 --SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP----------AQIYKKVT--------  257 (632)
T ss_pred             --cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH----------HHHHHHHH--------
Confidence              2334478999999999876 78999999999999999999999999765431          11111111        


Q ss_pred             hhhcccccCC-CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDS-YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          .+.++. +..--.+++++||.+||.. ..+|||+.|+|+
T Consensus       258 ----SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  258 ----SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             ----cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence                111111 1111246899999999999 999999999854

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-32  Score=252.45  Aligned_cols=243  Identities=16%  Similarity=0.190  Sum_probs=174.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|...  ++.+++|........   ..+.+.+|+++++.++||||+++++.+.+.+..|+||||+++
T Consensus         6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   85 (316)
T cd05574           6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPG   85 (316)
T ss_pred             eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCC
Confidence            467899999999999985  688999987554322   356788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc-
Q 016850          172 ANLADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE-  231 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~-  231 (381)
                      ++|.+++....  .........                 .|.+|+|.||+++.+    ..++|+|||++.......... 
T Consensus        86 ~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~----~~~~l~dfg~~~~~~~~~~~~~  161 (316)
T cd05574          86 GELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHES----GHIMLSDFDLSKQSDVEPPPVS  161 (316)
T ss_pred             CCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCC----CCEEEeecchhhcccccccccc
Confidence            99999997542  233222222                 234667999999876    569999999987643211100 


Q ss_pred             ------------------------cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc
Q 016850          232 ------------------------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID  287 (381)
Q Consensus       232 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~  287 (381)
                                              ........|+..|+|||++.+..++.++||||||+++|+|++|+.||......   
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~---  238 (316)
T cd05574         162 KALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD---  238 (316)
T ss_pred             cccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH---
Confidence                                    01112356899999999998888999999999999999999999999633211   


Q ss_pred             cccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC----hHHHHHHHHHHHHHhhh
Q 016850          288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD----MRQVTGLVSKMYLESKN  363 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~~L~~~~~~~~~  363 (381)
                              ..           +................++.+.+++.+||+.||++||+    +.++++   .-+.+...
T Consensus       239 --------~~-----------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~---~~~~~~~~  296 (316)
T cd05574         239 --------ET-----------FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ---HPFFRGVN  296 (316)
T ss_pred             --------HH-----------HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc---CchhhcCC
Confidence                    00           11111111111111225788999999999999999999    666654   22333344


Q ss_pred             hhhhc
Q 016850          364 WADKI  368 (381)
Q Consensus       364 ~~~~~  368 (381)
                      |....
T Consensus       297 ~~~~~  301 (316)
T cd05574         297 WALIR  301 (316)
T ss_pred             hhhcc
Confidence            55443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-32  Score=246.28  Aligned_cols=236  Identities=18%  Similarity=0.232  Sum_probs=172.8

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHH-hhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVI-CRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il-~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|...  ++.||+|........   ....+..|..++ ..++|+||+++++++..++.+++||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999984  788999986543221   123344555544 445899999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++......+...+..+                 |.+|+|.||++++.    ..+||+|||++.....        
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~--------  149 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT----GHLKLTDFGLSRNGLE--------  149 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----CcEEEeecccceeccc--------
Confidence            999999987665554444333                 23456888888876    5599999999875321        


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....|+..|+|||.+.+..++.++||||||+++|+|++|..||......        ....   .....         .
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~---~~~~~---------~  209 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD--------AVFD---NILSR---------R  209 (260)
T ss_pred             cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH--------HHHH---HHHhc---------c
Confidence            22356889999999998888899999999999999999999999632110        0110   00000         0


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~  365 (381)
                      ..........+++.+.+++.+||+.||++||++.++.+.|.+-+....+|+
T Consensus       210 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~  260 (260)
T cd05611         210 INWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD  260 (260)
T ss_pred             cCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence            001111222456789999999999999999999888888887777766774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=9e-33  Score=252.42  Aligned_cols=237  Identities=17%  Similarity=0.263  Sum_probs=167.6

Q ss_pred             HHHHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe--
Q 016850           85 LSEICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVS--  158 (381)
Q Consensus        85 ~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~--  158 (381)
                      +.++....+.| ..+.||.|+||.||+|.+.  ++.+++|...... ....++..|+.++.++ +|+||+++++++..  
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   86 (282)
T cd06636           8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS   86 (282)
T ss_pred             hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence            34443344444 3467899999999999984  6788888764432 2346788899999998 79999999999853  


Q ss_pred             ----CCeeeEEEeccCCCCHHHHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEE
Q 016850          159 ----GNCGYLVYEHVSGANLADCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       159 ----~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl  215 (381)
                          .+.+|+||||+++|+|.+++.....  .....+..                 +|++|+|.||+++++    ..++|
T Consensus        87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~----~~~~l  162 (282)
T cd06636          87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN----AEVKL  162 (282)
T ss_pred             ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEE
Confidence                4678999999999999999976432  23322222                 223566899999876    55999


Q ss_pred             cccccccccccCCCCccccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCccccc
Q 016850          216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~  290 (381)
                      +|||++......    ........|++.|+|||++.     +..++.++|||||||++|||++|..||......      
T Consensus       163 ~dfg~~~~~~~~----~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~------  232 (282)
T cd06636         163 VDFGVSAQLDRT----VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM------  232 (282)
T ss_pred             eeCcchhhhhcc----ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH------
Confidence            999998764321    11223466899999999875     346788999999999999999999999532110      


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ......           ............++..+.+||.+||+.||.+||++.||++
T Consensus       233 -----~~~~~~-----------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         233 -----RALFLI-----------PRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             -----hhhhhH-----------hhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence                 000000           0000011112245678999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3.9e-33  Score=262.21  Aligned_cols=236  Identities=18%  Similarity=0.197  Sum_probs=162.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv  165 (381)
                      ..+.||+|+||.||+|...  ++.||+|+......  ...+.+.+|+++|++++||||+++++++...      ...|++
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   98 (343)
T cd07878          19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV   98 (343)
T ss_pred             hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence            3577999999999999874  67899998654322  2345678999999999999999999988643      457999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||++ +++|.+++.... .....+.                 ..|++|+|+||+++.+    +.+||+|||+++....  
T Consensus        99 ~~~~-~~~l~~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~----~~~kl~Dfg~~~~~~~--  170 (343)
T cd07878          99 TNLM-GADLNNIVKCQK-LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED----CELRILDFGLARQADD--  170 (343)
T ss_pred             eecC-CCCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC----CCEEEcCCccceecCC--
Confidence            9999 789998886533 3323222                 2344677999999876    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-  306 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  306 (381)
                           ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......        .............. 
T Consensus       171 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~  237 (343)
T cd07878         171 -----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI--------DQLKRIMEVVGTPSP  237 (343)
T ss_pred             -----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHHHhCCCCH
Confidence                 1234578999999999876 56899999999999999999999999642210        00000000000000 


Q ss_pred             --------cchhhhhcc--cccC----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 --------GGVRKWVDR--RLKD----SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 --------~~~~~~~~~--~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              .........  ....    .......+.+.+|+.+||+.||.+|||+.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    000000000  0000    000123456889999999999999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=5.1e-32  Score=249.95  Aligned_cols=240  Identities=12%  Similarity=0.121  Sum_probs=167.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+..  ++.||+|........ ....+.+|+.++++++||||+++++++.+.+.+++||||++ +
T Consensus        10 ~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~   88 (301)
T cd07873          10 KLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K   88 (301)
T ss_pred             EeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-c
Confidence            4577999999999999885  678999987654332 34567899999999999999999999999999999999996 7


Q ss_pred             CHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..+                 |.+|+|+||+++++    ..+||+|||++.....    ....
T Consensus        89 ~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~dfg~~~~~~~----~~~~  160 (301)
T cd07873          89 DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER----GELKLADFGLARAKSI----PTKT  160 (301)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCC----CcEEECcCcchhccCC----CCCc
Confidence            9999887643 3333322222                 23566999999876    5699999999975422    1112


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-ccchhhh
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-VGGVRKW  312 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  312 (381)
                      .....+++.|+|||++.+. .++.++|||||||++|||++|++||......        ............. ...+..+
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  232 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--------EQLHFIFRILGTPTEETWPGI  232 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHcCCCChhhchhh
Confidence            2345678999999988654 5788999999999999999999999643211        0000000000000 0000000


Q ss_pred             h---------cccccCC----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 V---------DRRLKDS----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~---------~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .         .+.....    ....+++.+.+||.+||+.||.+|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0         0000000    11234667899999999999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=4.9e-32  Score=245.79  Aligned_cols=228  Identities=16%  Similarity=0.254  Sum_probs=167.9

Q ss_pred             ccccccCCCceEEEEEEC---CceEEEEEecccc----------cccHHHHHHHHHHHhh-cCCCCcceEEEEEEeCCee
Q 016850           97 AKKFTSSSASASWRGTIR---GKDVIIFQRKLRR----------SLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCG  162 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~----------~~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~~  162 (381)
                      .+.||+|+||.||+|.+.   ++.+++|......          .....++.+|+.++.+ ++||||+++++++..++..
T Consensus         5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   84 (269)
T cd08528           5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL   84 (269)
T ss_pred             hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence            467999999999999985   4678888764322          1134567788888875 7999999999999999999


Q ss_pred             eEEEeccCCCCHHHHhcC----CCCCCccchH------------------HHHHHhhhcceeecccCCCccceEEccccc
Q 016850          163 YLVYEHVSGANLADCLRN----PRNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       163 ~lv~e~~~~gsL~~~l~~----~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      ++||||+++++|.+++..    ........+.                  ..|.+|+|.||+++.+    ..+||+|||+
T Consensus        85 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~----~~~~l~dfg~  160 (269)
T cd08528          85 YIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGED----DKVTITDFGL  160 (269)
T ss_pred             EEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCC----CcEEEecccc
Confidence            999999999999998743    1222222111                  2344667889999876    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      +......     .......|+..|+|||.+.+..++.++||||||+++|||++|+.||.....           ......
T Consensus       161 ~~~~~~~-----~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----------~~~~~~  224 (269)
T cd08528         161 AKQKQPE-----SKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----------LSLATK  224 (269)
T ss_pred             eeecccc-----cccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----------HHHHHH
Confidence            9764321     133456789999999999988899999999999999999999999853211           010001


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      .           ......+.....+++.+.+++.+||+.||++||++.|+..+|+
T Consensus       225 ~-----------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         225 I-----------VEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             H-----------hhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            0           0111111111234678999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-33  Score=243.56  Aligned_cols=229  Identities=15%  Similarity=0.194  Sum_probs=175.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe----CCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVS----GNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~~~~~lv~e~~  169 (381)
                      .+.||-|-.|+|..+.++  ++.+|+|++.     +....++|+++.... .|||||.++++|++    ..++.+|||+|
T Consensus        67 ~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m  141 (400)
T KOG0604|consen   67 WQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM  141 (400)
T ss_pred             hhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence            467899999999999886  7788888743     246788999988777 69999999999885    45788999999


Q ss_pred             CCCCHHHHhcCCCC--CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          170 SGANLADCLRNPRN--PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       170 ~~gsL~~~l~~~~~--~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +||.|+..|++++.  +.++++.                 +.|+||||+|+|.... ..|..+||+|||+|+.-     .
T Consensus       142 eGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t-~~na~lKLtDfGFAK~t-----~  215 (400)
T KOG0604|consen  142 EGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT-SPNAPLKLTDFGFAKET-----Q  215 (400)
T ss_pred             cchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC-CCCcceEeccccccccc-----C
Confidence            99999999998775  3333322                 3455677888877663 34577999999999862     2


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ......+.+-||.|.|||++...+|+..+|+||+||++|-|+.|.+||.........+        .....+..+     
T Consensus       216 ~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aisp--------gMk~rI~~g-----  282 (400)
T KOG0604|consen  216 EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--------GMKRRIRTG-----  282 (400)
T ss_pred             CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCCh--------hHHhHhhcc-----
Confidence            2345567888999999999998999999999999999999999999998654433221        111111110     


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .-.+..+....+++..+++|+.+|..+|.+|.|+.++++
T Consensus       283 ---qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  283 ---QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             ---CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence               011223335678999999999999999999999999975

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=3e-32  Score=250.15  Aligned_cols=235  Identities=19%  Similarity=0.237  Sum_probs=176.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||++.+.  ++.+++|.......   ...+.+.+|+++|++++||||+++++++.+++.+++||||++
T Consensus         5 ~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (290)
T cd05580           5 FIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVP   84 (290)
T ss_pred             EEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCC
Confidence            3567899999999999984  78899988654322   235678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.....++...+..+                 |.+|+|.||+++++    +.+||+|||++......      
T Consensus        85 ~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~----~~~kl~dfg~~~~~~~~------  154 (290)
T cd05580          85 GGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSD----GYIKITDFGFAKRVKGR------  154 (290)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC----CCEEEeeCCCccccCCC------
Confidence            9999999987766654444333                 23456899999876    55999999999765321      


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                       .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....           .........          
T Consensus       155 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~----------  212 (290)
T cd05580         155 -TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----------IQIYEKILE----------  212 (290)
T ss_pred             -CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHhc----------
Confidence             2345689999999999888889999999999999999999999863221           000011110          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhhc
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~~  368 (381)
                       .  ....+...+..+.+++.+||+.||.+|+     +++|+++   .-+.+...|..+.
T Consensus       213 -~--~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~---~~~~~~~~~~~~~  266 (290)
T cd05580         213 -G--KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN---HPWFAGIDWIALL  266 (290)
T ss_pred             -C--CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc---CcccccCCHHHHh
Confidence             0  1123334567899999999999999999     6666643   3444555565553

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-32  Score=272.52  Aligned_cols=234  Identities=20%  Similarity=0.289  Sum_probs=180.9

Q ss_pred             cccccCCCceEEEEEEC---------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           98 KKFTSSSASASWRGTIR---------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      +.||+|.||.||+|...         ...||||..+..... ..+.+..|+++|+.+ +|+|||.++|+|...+.+++|+
T Consensus       302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~  381 (609)
T KOG0200|consen  302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV  381 (609)
T ss_pred             ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence            47999999999999863         346777776543333 567899999999999 7999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCC----------------CCCccch-----------------HHHHHHhhhcceeecccCCCccce
Q 016850          167 EHVSGANLADCLRNPR----------------NPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCA  213 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~----------------~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~  213 (381)
                      ||++.|+|.++|...+                ......+                 ..+|+||..+|||+..+    ..+
T Consensus       382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~----~~~  457 (609)
T KOG0200|consen  382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN----KVI  457 (609)
T ss_pred             EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC----CEE
Confidence            9999999999998876                1211111                 12456788999999998    459


Q ss_pred             EEcccccccccccCCCCccccccccC--CCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          214 KICHFGTAELCGEVSGNESGKVNKIE--GTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       214 kl~DFG~a~~~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      ||+|||+|+....   ..........  -...|||||.+....|+.++|||||||+||||+| |..||+....       
T Consensus       458 kIaDFGlar~~~~---~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-------  527 (609)
T KOG0200|consen  458 KIADFGLARDHYN---KDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-------  527 (609)
T ss_pred             EEccccceeccCC---CCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-------
Confidence            9999999986422   1111112222  2456999999999999999999999999999999 7888764210       


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                         .            ..+.+.+....+.+.|..+.+++.++|+.||+.+|++||++.++.+.++..+.+
T Consensus       528 ---~------------~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~  582 (609)
T KOG0200|consen  528 ---T------------EELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD  582 (609)
T ss_pred             ---H------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence               0            112223445556667888899999999999999999999999999999996543

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=1.5e-32  Score=252.55  Aligned_cols=227  Identities=17%  Similarity=0.255  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|..  .++.+++|..........+.+.+|+.++++++||||+++++++...+..|+|+||+++|+
T Consensus        23 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~  102 (293)
T cd06647          23 RFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGS  102 (293)
T ss_pred             eeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCc
Confidence            356799999999999986  467899998765544456778999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.... .....+..                 .|++|+|.||+++.+    ..++|+|||++......    .....
T Consensus       103 L~~~~~~~~-l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~----~~~kL~dfg~~~~~~~~----~~~~~  173 (293)
T cd06647         103 LTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD----GSVKLTDFGFCAQITPE----QSKRS  173 (293)
T ss_pred             HHHHHhhcC-CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCC----CCEEEccCcceeccccc----ccccc
Confidence            999997643 22222222                 123566889998876    55999999998764321    11223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...|++.|+|||.+.+..++.++|||||||++|++++|+.||........           ......          ...
T Consensus       174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-----------~~~~~~----------~~~  232 (293)
T cd06647         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----------LYLIAT----------NGT  232 (293)
T ss_pred             cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-----------eeehhc----------CCC
Confidence            45689999999999888889999999999999999999999964322100           000000          000


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+..++..+.+++.+||..+|.+||++.+++.
T Consensus       233 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         233 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            001123345678999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=3.6e-32  Score=248.88  Aligned_cols=241  Identities=16%  Similarity=0.239  Sum_probs=169.4

Q ss_pred             eeHHHHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEE-
Q 016850           83 YHLSEICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACV-  157 (381)
Q Consensus        83 ~~~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-  157 (381)
                      +.++.+..+.++| ..+.||+|+||.||+|...  ++.+++|+.... ......+.+|+.+++++ +||||+++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            3345555555566 3567899999999999884  678888875432 22346788999999999 7999999999874 


Q ss_pred             ----eCCeeeEEEeccCCCCHHHHhcCC----CCCCccchH-----------------HHHHHhhhcceeecccCCCccc
Q 016850          158 ----SGNCGYLVYEHVSGANLADCLRNP----RNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       158 ----~~~~~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~  212 (381)
                          +++.+++||||+++|+|.+++...    ....+..+.                 .+|++|+|+||++++.    ..
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~----~~  162 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE----GG  162 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCC----CC
Confidence                456789999999999999987532    222222211                 1234567999999887    45


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID  287 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~  287 (381)
                      +||+|||+++....    .........|++.|+|||++..     ..++.++|||||||++|||++|+.||.....    
T Consensus       163 ~kl~dfg~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----  234 (286)
T cd06638         163 VKLVDFGVSAQLTS----TRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP----  234 (286)
T ss_pred             EEEccCCceeeccc----CCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch----
Confidence            99999999876432    1112234569999999998753     4578899999999999999999999863211    


Q ss_pred             cccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                             .........        ....  ....+..++..+.+|+.+||+.||++||++.||++.
T Consensus       235 -------~~~~~~~~~--------~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         235 -------MRALFKIPR--------NPPP--TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             -------hHHHhhccc--------cCCC--cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence                   000000000        0000  011122345679999999999999999999999764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-33  Score=251.56  Aligned_cols=243  Identities=19%  Similarity=0.274  Sum_probs=176.9

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhh--cCCCCcceEEEEEEeCC----eeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICR--SHHSSLIKLLGACVSGN----CGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~----~~~lv~e~~~~  171 (381)
                      +.+|+|.||.||||.+.++.||||++...   ..+.|.+|.+|...  ++|+||++++++-+...    .++||+||.+.
T Consensus       216 eli~~Grfg~V~KaqL~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~k  292 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLDNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPK  292 (534)
T ss_pred             HHhhcCccceeehhhccCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccC
Confidence            45899999999999999999999987543   35778888888776  48999999999876554    79999999999


Q ss_pred             CCHHHHhcCCCCC-------------------------CccchHHHHHHhhhcceeecccCCCccceEEccccccccccc
Q 016850          172 ANLADCLRNPRNP-------------------------SFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       172 gsL~~~l~~~~~~-------------------------~~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      |+|.+||+.+-..                         .-....+.|+||++.|||+.++    ++..|+|||+|..+..
T Consensus       293 GsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D----lTccIaDFGLAl~~~p  368 (534)
T KOG3653|consen  293 GSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKND----LTCCIADFGLALRLEP  368 (534)
T ss_pred             CcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccC----CcEEeeccceeEEecC
Confidence            9999999764210                         1112335788999999999998    7799999999998753


Q ss_pred             CCCCccccccccCCCccccchhhhcCCC------CCcchhHHHHHHHHHHHHhCCccccc-cccCCccccc----chhHH
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASGV------VTQKCDVYAFGVVVLELLSGEEVLKF-VFDEGIDGYR----RVSVV  295 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDIwSlGvil~elltg~~pf~~-~~~~~~~~~~----~~~~~  295 (381)
                        ..........+||.+|||||++.+.-      .-.+.||||+|.++|||+++..-+.. ...+-..++.    ...-+
T Consensus       369 --~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~  446 (534)
T KOG3653|consen  369 --GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL  446 (534)
T ss_pred             --CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence              23333444589999999999987542      12469999999999999998765531 1111111111    00111


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHH-----HHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVE-----VAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      +.....+          +.+..++.++..     ...-+.+.+..||+.||+.|.|+.=+.+++.++..
T Consensus       447 e~mq~~V----------V~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  447 EEMQELV----------VRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             HHHHHHH----------HhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            1111111          233334444432     34568999999999999999999999999988865

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-32  Score=244.87  Aligned_cols=224  Identities=18%  Similarity=0.305  Sum_probs=167.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.  ++.+++|....... ...+++.+|++++++++   ||||+++++++.++...++||||++
T Consensus         6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06917           6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE   85 (277)
T ss_pred             hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC
Confidence            457899999999999984  78899988654432 34567889999999996   9999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++... ......+..+                 |.+|+|.||++++.    ..++|+|||++......    ..
T Consensus        86 ~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~----~~~~l~dfg~~~~~~~~----~~  156 (277)
T cd06917          86 GGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT----GNVKLCDFGVAALLNQN----SS  156 (277)
T ss_pred             CCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCC----CCEEEccCCceeecCCC----cc
Confidence            99999998764 3333332222                 23466999999886    56999999999775321    12


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......|+..|+|||.+.++ .++.++|||||||++|+|++|+.||......           .....            
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----------~~~~~------------  213 (277)
T cd06917         157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----------RAMML------------  213 (277)
T ss_pred             ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----------hhhhc------------
Confidence            23345689999999988754 4689999999999999999999999632110           00000            


Q ss_pred             hcccccCCCCH-HHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPV-EVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..+. .++..+.+++.+||+.||++||++.++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         214 IPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             cccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            00000111111 25578999999999999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=7.8e-32  Score=246.50  Aligned_cols=240  Identities=18%  Similarity=0.199  Sum_probs=168.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ...||+|+||.||+|.+.  ++.|++|+......  ...+.+.+|++++++++||||+++++++......++||||++++
T Consensus         6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~   85 (286)
T cd07847           6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHT   85 (286)
T ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCcc
Confidence            467899999999999985  78899997654322  23456889999999999999999999999999999999999998


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .|..++.......+..+..+                 |.+|+|.||+++.+    +.+||+|||++..+...    ....
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~~----~~~~  157 (286)
T cd07847          86 VLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQ----GQIKLCDFGFARILTGP----GDDY  157 (286)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCC----CcEEECccccceecCCC----cccc
Confidence            88888766555554443332                 33566999999876    56999999999875321    1122


Q ss_pred             cccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC----------
Q 016850          236 NKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG----------  304 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------  304 (381)
                      ....++..|+|||++.+ ..++.++|||||||++|||++|+.||.......        ...........          
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD--------QLYLIRKTLGDLIPRHQQIFS  229 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHhCCCChHHhhhcc
Confidence            34567899999998876 457899999999999999999999996432210        00000000000          


Q ss_pred             CccchhhhhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...-......+......     ....+..+.+|+.+||+.||++||++.|++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            00000000000000000     1124677999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.1e-32  Score=249.55  Aligned_cols=238  Identities=16%  Similarity=0.182  Sum_probs=162.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhc---CCCCcceEEEEEEe-----CCeeeE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRS---HHSSLIKLLGACVS-----GNCGYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l---~h~nIv~l~~~~~~-----~~~~~l  164 (381)
                      .+.||+|+||.||+|.+.  ++.||+|........  ....+.+|+++++.+   +||||+++++++.+     ....++
T Consensus         5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l   84 (288)
T cd07863           5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL   84 (288)
T ss_pred             eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence            567999999999999985  678999987653322  234567788887766   69999999998864     345899


Q ss_pred             EEeccCCCCHHHHhcCCCC--CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          165 VYEHVSGANLADCLRNPRN--PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~--~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      ||||++ ++|.+++.....  .+...+..                 +|++|+|+||+++.+    +.+||+|||+++...
T Consensus        85 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~----~~~kl~dfg~~~~~~  159 (288)
T cd07863          85 VFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG----GQVKLADFGLARIYS  159 (288)
T ss_pred             EEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CCEEECccCcccccc
Confidence            999996 699999876432  33333222                 234567999999876    559999999997643


Q ss_pred             cCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC-
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG-  304 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-  304 (381)
                      .     ........||..|+|||++.+..++.++|||||||++|||++|++||......        ............ 
T Consensus       160 ~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~--------~~~~~~~~~~~~~  226 (288)
T cd07863         160 C-----QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--------DQLGKIFDLIGLP  226 (288)
T ss_pred             C-----cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH--------HHHHHHHHHhCCC
Confidence            2     11223456899999999998888999999999999999999999999643211        011111110000 


Q ss_pred             Cccchhh-------hhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGVRK-------WVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~~~-------~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..       .+.+...   ....+.++..+.+|+.+||+.||++|||+.|++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         227 PEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0000000       0000000   0011235677899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=4.3e-32  Score=244.23  Aligned_cols=226  Identities=17%  Similarity=0.262  Sum_probs=169.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|..+  +..+++|.......  ...+.+.+|++++++++|+||+++++.+.+.+..++|+||++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   84 (257)
T cd08225           5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG   84 (257)
T ss_pred             EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence            567899999999999985  67888888654321  24567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCC--CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPRN--PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~~--~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++.....  ..+..+..+                 |.+|+|.||++++++   ..+||+|||.+.....    ...
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~---~~~~l~d~~~~~~~~~----~~~  157 (257)
T cd08225          85 DLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNG---MVAKLGDFGIARQLND----SME  157 (257)
T ss_pred             cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCC---CeEEecccccchhccC----Ccc
Confidence            99999976432  233322222                 235679999998763   4579999999876532    111


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|++.|+|||++.+..++.++||||||+++||+++|+.||....           ..........          
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----------~~~~~~~~~~----------  216 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----------LHQLVLKICQ----------  216 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHHHHhc----------
Confidence            2233568999999999988889999999999999999999999985321           1111111111          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .. ........+..+.+++.+||..+|++||++.++++
T Consensus       217 -~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         217 -GY-FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             -cc-CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence             11 11122345568999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=5e-32  Score=245.02  Aligned_cols=228  Identities=18%  Similarity=0.256  Sum_probs=170.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.|+||.||++.+.  ++.+++|....... ....++.+|++++++++||||+++++++...+.+++||||+++++
T Consensus         6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   85 (265)
T cd06605           6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGS   85 (265)
T ss_pred             HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCc
Confidence            356999999999999996  77888887654432 345678999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCCccch------------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          174 LADCLRNP-RNPSFTVL------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       174 L~~~l~~~-~~~~~~~~------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |.+++... ...+...+                  ..+|.+|+|.||+++++    +.++|+|||++......      .
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~----~~~~l~d~g~~~~~~~~------~  155 (265)
T cd06605          86 LDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSR----GQIKLCDFGVSGQLVNS------L  155 (265)
T ss_pred             HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCC----CCEEEeecccchhhHHH------H
Confidence            99999865 33332222                  12334566888888886    56999999998764211      1


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||.......      ....+......           .
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~-----------~  218 (265)
T cd06605         156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP------DGIFELLQYIV-----------N  218 (265)
T ss_pred             hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc------ccHHHHHHHHh-----------c
Confidence            112678999999999988899999999999999999999999996432210      01111111111           1


Q ss_pred             ccccCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVE-VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      . .....+.. ++..+.++|.+||..||++||++.+++.
T Consensus       219 ~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         219 E-PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             C-CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            1 11122222 6778999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.1e-32  Score=247.02  Aligned_cols=237  Identities=17%  Similarity=0.258  Sum_probs=175.9

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||.|+||.||++.+.  ++.+++|.......   ...+.+.+|++++++++||||+++++.+...+..|+||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            689999999999996  78899998754333   2456788999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC----ccc
Q 016850          175 ADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN----ESG  233 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~----~~~  233 (381)
                      .+++..........+..+                 |.+|+|.||+++++    ..++|+|||++.........    ...
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~~~  156 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN----GHLKLTDFGLSKVGLVRRQINLNDDEK  156 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC----CCEEEEecccchhcccCcccccccccc
Confidence            999987555443333322                 33566999999887    55999999998764221110    011


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......++..|+|||.+....++.++||||||+++|++++|..||.....           ........           
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----------~~~~~~~~-----------  214 (265)
T cd05579         157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----------EEIFQNIL-----------  214 (265)
T ss_pred             cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHh-----------
Confidence            23345688999999999888889999999999999999999999863221           01111111           


Q ss_pred             cccccCCCCHH--HHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhh
Q 016850          314 DRRLKDSYPVE--VAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNW  364 (381)
Q Consensus       314 ~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~  364 (381)
                      ...  ...+..  .+..+.+++.+||+.+|++||++.++.+.|+.-+....+|
T Consensus       215 ~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~  265 (265)
T cd05579         215 NGK--IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW  265 (265)
T ss_pred             cCC--cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence            000  011112  3678999999999999999999988877777655554444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.1e-31  Score=245.87  Aligned_cols=225  Identities=20%  Similarity=0.327  Sum_probs=170.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ...||+|+||.||+|.+.  ++.+++|+...... ..+.+.+|++++++++|+||+++++.+...+..++|+||+++++|
T Consensus        24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L  102 (286)
T cd06614          24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL  102 (286)
T ss_pred             hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcH
Confidence            356899999999999996  78899998765443 567889999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ......+..+                 |.+|+|.||+++.+    ..++|+|||++.....    ......
T Consensus       103 ~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~----~~~~l~d~~~~~~~~~----~~~~~~  174 (286)
T cd06614         103 TDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKD----GSVKLADFGFAAQLTK----EKSKRN  174 (286)
T ss_pred             HHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCC----CCEEECccchhhhhcc----chhhhc
Confidence            99998865 4443332222                 23456888888876    5699999999865432    111223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...++..|+|||++.+..++.++|||||||++|+|++|+.||.....           ........           ...
T Consensus       175 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~-----------~~~~~~~~-----------~~~  232 (286)
T cd06614         175 SVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP-----------LRALFLIT-----------TKG  232 (286)
T ss_pred             cccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHH-----------hcC
Confidence            45688999999999888899999999999999999999999853211           00000000           000


Q ss_pred             ccC-CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKD-SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ... ..+..++..+.+++.+||+.+|.+||++.++++
T Consensus       233 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         233 IPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            111 112235678999999999999999999999965

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.98  E-value=7.6e-33  Score=276.36  Aligned_cols=227  Identities=19%  Similarity=0.262  Sum_probs=164.2

Q ss_pred             cccccCCCceEEEEEE--CCceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEE------------------
Q 016850           98 KKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGAC------------------  156 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~------------------  156 (381)
                      +.||+||||.||++++  +|+.||||++...... ....+.+|+.+|.+|+|||||++|..|                  
T Consensus       485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~  564 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE  564 (1351)
T ss_pred             HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence            5789999999999998  5999999998776522 456789999999999999999999877                  


Q ss_pred             --------------------------------------------------------------------------------
Q 016850          157 --------------------------------------------------------------------------------  156 (381)
Q Consensus       157 --------------------------------------------------------------------------------  156 (381)
                                                                                                      
T Consensus       565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~  644 (1351)
T KOG1035|consen  565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD  644 (1351)
T ss_pred             hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence                                                                                            


Q ss_pred             -----------Ee--C--------CeeeEEEeccCCCCHHHHhcCCCCCC--------ccc----------hHHHHHHhh
Q 016850          157 -----------VS--G--------NCGYLVYEHVSGANLADCLRNPRNPS--------FTV----------LSTWLSRMQ  197 (381)
Q Consensus       157 -----------~~--~--------~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~----------~~~~~~~l~  197 (381)
                                 .+  .        -.+||-||||+..+|.+++..+....        +++          ...+|+|||
T Consensus       645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLK  724 (1351)
T KOG1035|consen  645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLK  724 (1351)
T ss_pred             chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCC
Confidence                       00  0        24799999999877777777654321        111          224567888


Q ss_pred             hcceeecccCCCccceEEcccccccccc--------------cCCCCccccccccCCCccccchhhhcCC---CCCcchh
Q 016850          198 SSSIIVSEENAGSLCAKICHFGTAELCG--------------EVSGNESGKVNKIEGTRGYMAPEFQASG---VVTQKCD  260 (381)
Q Consensus       198 ~~Nill~~~~~~~~~~kl~DFG~a~~~~--------------~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sD  260 (381)
                      |.||++++.    ..|||+|||+|....              ..........+..+||..|+|||++.+.   .|+.|+|
T Consensus       725 P~NIFLd~~----~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiD  800 (1351)
T KOG1035|consen  725 PRNIFLDSR----NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKID  800 (1351)
T ss_pred             cceeEEcCC----CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhh
Confidence            999999987    459999999998721              0011112245678999999999998764   4999999


Q ss_pred             HHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc--CCCCHHHHHHHHHHHHHhhc
Q 016850          261 VYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK--DSYPVEVAEKMVLLGLQCVD  338 (381)
Q Consensus       261 IwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~  338 (381)
                      |||||||++||+.   ||...       +++...+...+              +..++  ..+.....+.-..+|++|++
T Consensus       801 mYSLGIVlFEM~y---PF~Ts-------MERa~iL~~LR--------------~g~iP~~~~f~~~~~~~e~slI~~Ll~  856 (1351)
T KOG1035|consen  801 MYSLGIVLFEMLY---PFGTS-------MERASILTNLR--------------KGSIPEPADFFDPEHPEEASLIRWLLS  856 (1351)
T ss_pred             hHHHHHHHHHHhc---cCCch-------HHHHHHHHhcc--------------cCCCCCCcccccccchHHHHHHHHHhc
Confidence            9999999999995   45421       11112222111              11111  11233344566889999999


Q ss_pred             cCCCCCCChHHHHH
Q 016850          339 EDPGKRPDMRQVTG  352 (381)
Q Consensus       339 ~dP~~RPs~~evl~  352 (381)
                      .||.+||||.|+|+
T Consensus       857 hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  857 HDPSKRPTATELLN  870 (1351)
T ss_pred             CCCccCCCHHHHhh
Confidence            99999999999974

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.98  E-value=3.7e-32  Score=249.15  Aligned_cols=247  Identities=17%  Similarity=0.220  Sum_probs=183.5

Q ss_pred             ccccccCCCceEEEEEE-----CCceEEEEEecccc----cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTI-----RGKDVIIFQRKLRR----SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      .+.||+|+||.||+++.     ++..+++|..+...    ....+.+.+|++++.++ +||||+++++.+..++..++||
T Consensus         5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   84 (288)
T cd05583           5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL   84 (288)
T ss_pred             EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence            46789999999999985     35679998765322    12346688999999999 6999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++|+|.+++..........+..+                 |.+|+|.||+++.+    ..++|+|||+++.+...  
T Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~~~--  158 (288)
T cd05583          85 DYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSE----GHVVLTDFGLSKEFLAE--  158 (288)
T ss_pred             ecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC----CCEEEEECccccccccc--
Confidence            99999999999976555444433322                 23456999999876    55999999998765321  


Q ss_pred             CccccccccCCCccccchhhhcCCC--CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                       .........|+..|+|||.+.+..  .+.++||||||+++|||++|..||.......       ...........    
T Consensus       159 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~~----  226 (288)
T cd05583         159 -EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-------SQSEISRRILK----  226 (288)
T ss_pred             -cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-------hHHHHHHHHHc----
Confidence             111223456899999999887654  6889999999999999999999986321110       00111111110    


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCC
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGF  370 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~  370 (381)
                               .....+..++..+.+++.+||+.||++|||+.++.+.|+..+.+..+|+.+...
T Consensus       227 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~~~~  280 (288)
T cd05583         227 ---------SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAK  280 (288)
T ss_pred             ---------cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHHhhh
Confidence                     011233445678999999999999999999999999999999999999866443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.98  E-value=1.1e-31  Score=250.76  Aligned_cols=252  Identities=13%  Similarity=0.116  Sum_probs=163.8

Q ss_pred             ccccccC--CCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSS--SASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G--~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|  +|++||+++..  +..||+|+.......  ..+.+.+|+++++.++|||||++++++.+++..++||||++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            3568888  67899999885  788999987554322  34567789999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|+|.+++..+.  ..+...+..+                 |++|+|+||+++.+    ..++++||+............
T Consensus        83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~----~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD----GKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC----CcEEEcccchhhccccccccc
Confidence            999999996532  2333332222                 23566888888776    458999998654321100000


Q ss_pred             ---cccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch----hHHH---HHH
Q 016850          232 ---SGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV----SVVD---KAS  299 (381)
Q Consensus       232 ---~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~----~~~~---~~~  299 (381)
                         ........++..|+|||++.+  ..++.++|||||||++|||++|+.||..............    ...+   ...
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPA  238 (327)
T ss_pred             cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhh
Confidence               001123457788999999875  4589999999999999999999999964322110000000    0000   000


Q ss_pred             HHHc--C----Cccchhhh---------hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          300 EAVA--G----GVGGVRKW---------VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       300 ~~~~--~----~~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....  .    ....+...         ............+++.+.+|+.+||+.||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence            0000  0    00000000         0000001122345678999999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.98  E-value=1.2e-31  Score=244.46  Aligned_cols=221  Identities=16%  Similarity=0.193  Sum_probs=163.9

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||+|+||+||+|...  ++.+++|......   ......+.+|+++|++++||||+++++++...+..|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999875  7889988764322   22345677899999999999999999999999999999999999999


Q ss_pred             HHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++....  ......+..+                 |.+|+|.||+++++    ..++|+|||++.....     ....
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~----~~~~l~dfg~~~~~~~-----~~~~  151 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH----GNVRISDLGLAVELKG-----GKKI  151 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC----CCEEEccCcchhhhcc-----CCcc
Confidence            99997654  3443333222                 33566999999887    5599999999876432     1122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....++..|+|||++.+..++.++|||||||++|+|++|+.||.......        .........           . 
T Consensus       152 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~-----------~-  211 (277)
T cd05577         152 KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV--------EKEELKRRT-----------L-  211 (277)
T ss_pred             ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc--------cHHHHHhcc-----------c-
Confidence            34568889999999988889999999999999999999999996432210        000000000           0 


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                      ......+..+++.+.+++.+||+.||.+||++.+
T Consensus       212 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         212 EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             cccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence            0111233445778999999999999999995444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=8.4e-32  Score=244.56  Aligned_cols=227  Identities=19%  Similarity=0.290  Sum_probs=164.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCC------eeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGN------CGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~------~~~lv~  166 (381)
                      ..+.||+|+||.||+|...  ++.+++|....... ..+++.+|+.+++++ .|+||+++++++.+..      .+++||
T Consensus        10 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~   88 (275)
T cd06608          10 LVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVM   88 (275)
T ss_pred             heeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEE
Confidence            3567999999999999985  56788887654332 456799999999999 7999999999997644      489999


Q ss_pred             eccCCCCHHHHhcCCC----CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          167 EHVSGANLADCLRNPR----NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~----~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      ||+++++|.+++....    ......+..                 +|.+|+|.||+++++    ..+||+|||++....
T Consensus        89 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~----~~~~l~d~~~~~~~~  164 (275)
T cd06608          89 ELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKN----AEVKLVDFGVSAQLD  164 (275)
T ss_pred             EcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccC----CeEEECCCccceecc
Confidence            9999999999986532    333322222                 233566999999876    569999999987642


Q ss_pred             cCCCCccccccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      .    .........|+..|+|||++..     ..++.++|||||||++|+|++|+.||.....           ......
T Consensus       165 ~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~~~~~  229 (275)
T cd06608         165 S----TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-----------MRALFK  229 (275)
T ss_pred             c----chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-----------HHHHHH
Confidence            2    1122334668999999998753     3467899999999999999999999963211           011111


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....        ..+  ....+..++..+.+|+.+||..||.+|||+.++++
T Consensus       230 ~~~~--------~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         230 IPRN--------PPP--TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             hhcc--------CCC--CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            1100        000  11122346678999999999999999999999975

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.98  E-value=1.3e-31  Score=243.47  Aligned_cols=232  Identities=17%  Similarity=0.248  Sum_probs=166.2

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eee
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGY  163 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~  163 (381)
                      .+.||+|+||.||+|.+.     +..+++|......  ....+++.+|++++++++||||+++++++....      ..+
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   83 (273)
T cd05074           4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM   83 (273)
T ss_pred             hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence            457999999999999863     5778998865432  224567889999999999999999999886532      247


Q ss_pred             EEEeccCCCCHHHHhcCCC------CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccc
Q 016850          164 LVYEHVSGANLADCLRNPR------NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      +++||+++|+|.+++....      ..+...+..                 .|++|+|+||+++++    ..+||+|||+
T Consensus        84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~----~~~kl~dfg~  159 (273)
T cd05074          84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN----MTVCVADFGL  159 (273)
T ss_pred             EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC----CCEEECcccc
Confidence            8999999999998875321      122222222                 233567899999765    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++.....  ..........+++.|++||.+....++.++|||||||++|||++ |++||.....        ......  
T Consensus       160 ~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~--  227 (273)
T cd05074         160 SKKIYSG--DYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNY--  227 (273)
T ss_pred             cccccCC--cceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHH--
Confidence            9864321  11111223446778999999988889999999999999999999 8888853211        011111  


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                       ....            .....+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       228 -~~~~------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         228 -LIKG------------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             -HHcC------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             1100            01111234557899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.98  E-value=1.6e-31  Score=245.61  Aligned_cols=225  Identities=19%  Similarity=0.288  Sum_probs=168.6

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      ..||+|+||.||++...  ++.|++|+...........+.+|+.+++.++|+||+++++++...+..++||||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            56899999999999884  7889999875544445667899999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccccc
Q 016850          176 DCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKI  238 (381)
Q Consensus       176 ~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  238 (381)
                      +++.... .....+..+                 |.+|+|+||+++.+    ..++|+|||++.....    ........
T Consensus       106 ~~~~~~~-~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~----~~~~l~dfg~~~~~~~----~~~~~~~~  176 (292)
T cd06657         106 DIVTHTR-MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVSK----EVPRRKSL  176 (292)
T ss_pred             HHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC----CCEEEcccccceeccc----cccccccc
Confidence            9886543 333332222                 23566999999876    5599999998875432    11122345


Q ss_pred             CCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc
Q 016850          239 EGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK  318 (381)
Q Consensus       239 ~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (381)
                      .|++.|+|||++.+..++.++||||||+++|+|++|+.||.....        .........           .....+.
T Consensus       177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--------~~~~~~~~~-----------~~~~~~~  237 (292)
T cd06657         177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKMIRD-----------NLPPKLK  237 (292)
T ss_pred             ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHh-----------hCCcccC
Confidence            689999999998888889999999999999999999999853211        000110000           0111110


Q ss_pred             CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          319 DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       319 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ....++..+.+++.+||+.||.+||++.++++
T Consensus       238 --~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         238 --NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             --CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence              11234667899999999999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.98  E-value=1e-31  Score=246.62  Aligned_cols=240  Identities=17%  Similarity=0.236  Sum_probs=170.6

Q ss_pred             eeHHHHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe
Q 016850           83 YHLSEICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVS  158 (381)
Q Consensus        83 ~~~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~  158 (381)
                      +.+.++..++++| ....||+|+||.||++...  ++.+++|...... .....+.+|+.+++++ +||||+++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            4455666666767 3567899999999999984  6788888764322 2346788899999999 89999999999875


Q ss_pred             C-----CeeeEEEeccCCCCHHHHhcC----CCCCCccchHH-----------------HHHHhhhcceeecccCCCccc
Q 016850          159 G-----NCGYLVYEHVSGANLADCLRN----PRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       159 ~-----~~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~  212 (381)
                      .     +.+++||||+++|+|.++++.    .....+..+..                 +|++|+|+||+++++    ..
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~----~~  166 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTE----GG  166 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC----CC
Confidence            3     468999999999999998863    22333322222                 234577999999876    45


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCC-----CCCcchhHHHHHHHHHHHHhCCccccccccCCcc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-----VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID  287 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~  287 (381)
                      +||+|||++.......    .......|+..|+|||++...     .++.++|||||||++|||++|++||.....    
T Consensus       167 ~kl~dfg~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~----  238 (291)
T cd06639         167 VKLVDFGVSAQLTSTR----LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP----  238 (291)
T ss_pred             EEEeecccchhccccc----ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH----
Confidence            9999999987653211    112335689999999987643     368899999999999999999999863211    


Q ss_pred             cccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             ...........        ...  ...+......+.+||.+||+.||++||++.++++
T Consensus       239 -------~~~~~~~~~~~--------~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         239 -------VKTLFKIPRNP--------PPT--LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             -------HHHHHHHhcCC--------CCC--CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence                   01111111000        000  1112345567999999999999999999999976

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=4.3e-31  Score=242.12  Aligned_cols=234  Identities=16%  Similarity=0.211  Sum_probs=165.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~  171 (381)
                      .+.||.|++|.||+|.+.  ++.+++|....... ....++.+|++++++++||||+++++++.+  .+.+++||||+++
T Consensus         6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   85 (287)
T cd06621           6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEG   85 (287)
T ss_pred             EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCC
Confidence            467999999999999984  67888887654333 245678999999999999999999998865  4478999999999


Q ss_pred             CCHHHHhcCC----CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          172 ANLADCLRNP----RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       172 gsL~~~l~~~----~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ++|.+++...    .......+..                 +|.+|+|.||++++.    ..++|+|||++.....    
T Consensus        86 ~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~----~~~~l~dfg~~~~~~~----  157 (287)
T cd06621          86 GSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK----GQVKLCDFGVSGELVN----  157 (287)
T ss_pred             CCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecC----CeEEEeeccccccccc----
Confidence            9999887531    2222222211                 233456888888876    5599999999865421    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                        .......++..|+|||.+.+..++.++|||||||++|+|++|+.||........   .......+   .....   ..
T Consensus       158 --~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~---~~~~~---~~  226 (287)
T cd06621         158 --SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---GPIELLSY---IVNMP---NP  226 (287)
T ss_pred             --cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC---ChHHHHHH---HhcCC---ch
Confidence              111235678899999999888999999999999999999999999974422100   00111111   11000   00


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      . ....  .......++.+.+++.+||+.||.+|||+.|+++
T Consensus       227 ~-~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         227 E-LKDE--PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             h-hccC--CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            0 0000  0001234678999999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=1.9e-32  Score=269.12  Aligned_cols=244  Identities=14%  Similarity=0.113  Sum_probs=157.2

Q ss_pred             cccccccCCCceEEEEEECCc---eEEEE-----------------EecccccccHHHHHHHHHHHhhcCCCCcceEEEE
Q 016850           96 LAKKFTSSSASASWRGTIRGK---DVIIF-----------------QRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGA  155 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~---~v~vk-----------------~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~  155 (381)
                      ..+.||+|+||+||+|.++..   .++++                 +..........++.+|+.+|++++|||||+++++
T Consensus       152 ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~  231 (501)
T PHA03210        152 VIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEI  231 (501)
T ss_pred             EEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEE
Confidence            467899999999999876421   11111                 0000111134568899999999999999999999


Q ss_pred             EEeCCeeeEEEeccCCCCHHHHhcCCCCC-----Ccc-------ch----------HHHHHHhhhcceeecccCCCccce
Q 016850          156 CVSGNCGYLVYEHVSGANLADCLRNPRNP-----SFT-------VL----------STWLSRMQSSSIIVSEENAGSLCA  213 (381)
Q Consensus       156 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~-------~~----------~~~~~~l~~~Nill~~~~~~~~~~  213 (381)
                      +.+.+..|+|+|++ .++|.+++......     ...       ++          ..+|+||||+|||++.+    +.+
T Consensus       232 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~----~~v  306 (501)
T PHA03210        232 LRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD----GKI  306 (501)
T ss_pred             EEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CCE
Confidence            99999999999999 57888887643211     111       11          12345777999999876    569


Q ss_pred             EEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchh
Q 016850          214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVS  293 (381)
Q Consensus       214 kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~  293 (381)
                      ||+|||+++.+..   ..........||+.|+|||++.+..++.++|||||||++|||++|..++.......    ....
T Consensus       307 kL~DFGla~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~----~~~~  379 (501)
T PHA03210        307 VLGDFGTAMPFEK---EREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK----PGKQ  379 (501)
T ss_pred             EEEeCCCceecCc---ccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC----HHHH
Confidence            9999999987532   11122234679999999999999899999999999999999999875442211100    0001


Q ss_pred             HHHHHHHHHcCCc-------cchhhhhcccc----cCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          294 VVDKASEAVAGGV-------GGVRKWVDRRL----KDSYP-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       294 ~~~~~~~~~~~~~-------~~~~~~~~~~~----~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..... .+....       ..+..++....    ....+     ...+.++.+++.+||+.||.+|||+.|+++
T Consensus       380 ~~~~~~-~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        380 LLKIID-SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHH-hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence            110000 000000       00011110000    00000     113456888999999999999999999975

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=2.7e-31  Score=240.39  Aligned_cols=229  Identities=15%  Similarity=0.189  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc-----cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR-----SLDLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~  166 (381)
                      ..+.||+|+||.||+|.+.  +..+++|......     ......+.+|++++++++|+||+++++++.+.  +.+++||
T Consensus         6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~   85 (264)
T cd06653           6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV   85 (264)
T ss_pred             eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence            3567899999999999874  7889998764321     12345788999999999999999999998764  5688999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++++|.+++..........+..+                 |.+|+|+||+++++    ..++|+|||+++.......
T Consensus        86 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~----~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          86 EYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSA----GNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC----CCEEECccccccccccccc
Confidence            99999999999987555444433332                 23566999999876    5599999999986532111


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .. .......|+..|+|||++.+..++.++|||||||++|+|++|+.||.....           ....           
T Consensus       162 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~-----------  218 (264)
T cd06653         162 SG-TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-----------MAAI-----------  218 (264)
T ss_pred             cC-ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-----------HHHH-----------
Confidence            11 112345689999999999888889999999999999999999999863211           1111           


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .........+..+..+++.+.+++.+||+ +|..||++.+++.
T Consensus       219 ~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         219 FKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            11111222334566778899999999999 5799999998865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.98  E-value=7.9e-32  Score=246.56  Aligned_cols=240  Identities=20%  Similarity=0.235  Sum_probs=168.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|.+.  ++.+++|+.......  ..+.+.+|+++++.++||||+++++++.+++..++||||++++
T Consensus         6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   85 (286)
T cd07846           6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT   85 (286)
T ss_pred             eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence            567999999999999985  678888875443322  3567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|..+..........++..+                 |.+|+|+||+++++    ..++|+|||++..+...    ....
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~----~~~~l~dfg~~~~~~~~----~~~~  157 (286)
T cd07846          86 VLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQS----GVVKLCDFGFARTLAAP----GEVY  157 (286)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCC----CcEEEEeeeeeeeccCC----cccc
Confidence            99888765544444433332                 23456999999886    56999999998764321    1223


Q ss_pred             cccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh-
Q 016850          236 NKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV-  313 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  313 (381)
                      ....++..|+|||++.+ ..++.++|||||||++|||++|++||......        ............-........ 
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI--------DQLYHIIKCLGNLIPRHQEIFQ  229 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH--------HHHHHHHHHhCCCchhhHHHhc
Confidence            34568999999998875 45788999999999999999999998632210        000000000000000000000 


Q ss_pred             ---------cccccC-----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 ---------DRRLKD-----SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ---------~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                               .+....     ...+.++..+.+|+.+||+.||++||++.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                     000000     011235678999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.98  E-value=3.4e-32  Score=248.80  Aligned_cols=240  Identities=13%  Similarity=0.106  Sum_probs=164.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|++.  |+.+++|........  ....+.+|++++++++||||+++++++.+.+.+++|+||++ +
T Consensus         5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~   83 (284)
T cd07839           5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-Q   83 (284)
T ss_pred             EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-C
Confidence            467899999999999984  788999887543222  24567889999999999999999999999999999999996 6


Q ss_pred             CHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++... ...+...+..+                 |++|+|+||+++.+    ..+||+|||+++.....    ...
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~----~~~~l~dfg~~~~~~~~----~~~  155 (284)
T cd07839          84 DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN----GELKLADFGLARAFGIP----VRC  155 (284)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC----CcEEECccchhhccCCC----CCC
Confidence            898888653 33444433322                 23556888888876    55999999999764321    112


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cch---
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGV---  309 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  309 (381)
                      .....+++.|+|||++.+. .++.++|||||||++|||++|..||......       ............... ..+   
T Consensus       156 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  228 (284)
T cd07839         156 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-------DDQLKRIFRLLGTPTEESWPGV  228 (284)
T ss_pred             cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-------HHHHHHHHHHhCCCChHHhHHh
Confidence            2345678999999988764 4689999999999999999999886422110       000111000000000 000   


Q ss_pred             hhhhccc----cc-----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRR----LK-----DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~----~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+..    ..     ....+.+++++.+|+.+||+.||.+|||+.++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            0000000    00     0011235678999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=3.4e-32  Score=246.27  Aligned_cols=240  Identities=20%  Similarity=0.235  Sum_probs=177.0

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhh--cCCCCcceEEEEEEeCC----eeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICR--SHHSSLIKLLGACVSGN----CGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~----~~~lv~e~~  169 (381)
                      ..+.||+|.||.||+|.|+|..||||++...   +...+.+|.+|.+.  |+|+||+.+++.-..++    .+|||.+|-
T Consensus       215 L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH  291 (513)
T KOG2052|consen  215 LQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH  291 (513)
T ss_pred             EEEEecCccccceeeccccCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence            4567999999999999999999999997543   34678888888776  59999999998754332    589999999


Q ss_pred             CCCCHHHHhcCCCCCC------------------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          170 SGANLADCLRNPRNPS------------------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~------------------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      +.|+|+|||.......                        .....++|+|||+.|||+..+    ++.-|+|+|||....
T Consensus       292 e~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn----~~C~IADLGLAv~h~  367 (513)
T KOG2052|consen  292 EHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN----GTCCIADLGLAVRHD  367 (513)
T ss_pred             cCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC----CcEEEeeceeeEEec
Confidence            9999999998743211                        112246788999999999998    669999999998775


Q ss_pred             cCCCCccccccccCCCccccchhhhcCC----CC-C-cchhHHHHHHHHHHHHhC----------CccccccccCCcccc
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASG----VV-T-QKCDVYAFGVVVLELLSG----------EEVLKFVFDEGIDGY  289 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~-~-~~sDIwSlGvil~elltg----------~~pf~~~~~~~~~~~  289 (381)
                      .....-....+..+||-.|||||++...    .+ + ..+||||||+++||++-+          +.||......+.   
T Consensus       368 ~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP---  444 (513)
T KOG2052|consen  368 SDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP---  444 (513)
T ss_pred             ccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC---
Confidence            5444445556788999999999988642    12 2 359999999999999764          355543322111   


Q ss_pred             cchhHHHHHHHHHcCCccchhhhhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          290 RRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                          ..+...+.+          -.+++++..     ...+...+.+||+.||..||.-|.|+-.+-+.|.++..
T Consensus       445 ----s~eeMrkVV----------Cv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  445 ----SFEEMRKVV----------CVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             ----CHHHHhcce----------eecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence                111111111          112223322     24566788999999999999999999999999998874

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.98  E-value=1.6e-31  Score=244.63  Aligned_cols=241  Identities=20%  Similarity=0.224  Sum_probs=168.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|.+.  ++.|++|+.....  ....+.+.+|++++++++|+||+++++++.+++..++||||++++
T Consensus         6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~   85 (288)
T cd07833           6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERT   85 (288)
T ss_pred             EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCC
Confidence            467899999999999985  6788888765432  223578899999999999999999999999999999999999887


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .|..++..........+..+                 |.+|+|.||+++++    +.+||+|||++......   .....
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~----~~~kl~d~g~~~~~~~~---~~~~~  158 (288)
T cd07833          86 LLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSES----GVLKLCDFGFARALRAR---PASPL  158 (288)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----CCEEEEeeecccccCCC---ccccc
Confidence            77766655444443332222                 23456889999876    66999999999875331   11123


Q ss_pred             cccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC----------
Q 016850          236 NKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG----------  304 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------  304 (381)
                      ....++..|+|||++.+. .++.++||||||+++|+|++|++||......        ............          
T Consensus       159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07833         159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--------DQLYLIQKCLGPLPPSHQELFS  230 (288)
T ss_pred             cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCCHHHhhhcc
Confidence            346688999999999887 7899999999999999999999998632210        000000000000          


Q ss_pred             Cccc-----hhhhhccc-ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGG-----VRKWVDRR-LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~-----~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....     +....... ....++..++.++.+||.+||..||++||+++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            0000     00000000 001122234788999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.98  E-value=4.4e-32  Score=244.57  Aligned_cols=225  Identities=17%  Similarity=0.206  Sum_probs=172.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||.|+||.||+|...  ++.+++|.......   ...+.+.+|++++++++||||+++++.+.+++.+++||||+++
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   84 (258)
T cd05578           5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG   84 (258)
T ss_pred             EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence            567899999999999986  78899998754332   2457889999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      ++|.+++..........+..++                 .+|+|.||+++++    ..++|+|||++......     ..
T Consensus        85 ~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~----~~~~l~d~~~~~~~~~~-----~~  155 (258)
T cd05578          85 GDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ----GHVHITDFNIATKVTPD-----TL  155 (258)
T ss_pred             CCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC----CCEEEeecccccccCCC-----cc
Confidence            9999999876555544443333                 2455899999876    56999999998765321     12


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....|+..|+|||++.+..++.++||||||+++|+|++|+.||......         ..+......           .
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~-----------~  215 (258)
T cd05578         156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---------IRDQIRAKQ-----------E  215 (258)
T ss_pred             ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---------HHHHHHHHh-----------c
Confidence            33456889999999998888999999999999999999999998643321         011111111           0


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVT  351 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl  351 (381)
                      . .....+...+..+.+++.+||+.||.+||++  .|++
T Consensus       216 ~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         216 T-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             c-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            0 1223344566889999999999999999999  5543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.98  E-value=6.6e-32  Score=247.83  Aligned_cols=240  Identities=15%  Similarity=0.162  Sum_probs=163.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|...  ++.|++|........ ....+.+|++++++++|+||+++++++.+.+..++||||++ +
T Consensus         9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~   87 (291)
T cd07844           9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-T   87 (291)
T ss_pred             EEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-C
Confidence            3567999999999999984  788999987544322 23457789999999999999999999999999999999997 6


Q ss_pred             CHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..                 .|++|+|+||++++.    +.+||+|||+++.....    ...
T Consensus        88 ~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~----~~~kl~dfg~~~~~~~~----~~~  159 (291)
T cd07844          88 DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISER----GELKLADFGLARAKSVP----SKT  159 (291)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCC----CCEEECccccccccCCC----Ccc
Confidence            9999987643 233232222                 233566888888876    56999999998753211    111


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc-hhhh
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG-VRKW  312 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  312 (381)
                      .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||......       ................. +...
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  232 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV-------EDQLHKIFRVLGTPTEETWPGV  232 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH-------HHHHHHHHHhcCCCChhhhhhh
Confidence            223457889999998865 45789999999999999999999999643210       00111111110000000 0000


Q ss_pred             ------h--------cccccCCCCHHH--HHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 ------V--------DRRLKDSYPVEV--AEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ------~--------~~~~~~~~~~~~--~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .        ...+... ....  ...+.+++.+||+.||++||++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         233 SSNPEFKPYSFPFYPPRPLINH-APRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hhccccccccccccCChhHHHh-CcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                  0        0000000 0012  267889999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.98  E-value=2.8e-31  Score=242.40  Aligned_cols=223  Identities=15%  Similarity=0.161  Sum_probs=160.8

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhh---cCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICR---SHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~---l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .||+|+||.||++...  ++.+|+|........   ....+.+|..+++.   .+||||+.+++++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            3799999999999984  688999876443221   22334455444433   479999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++......++..+..+                 |++|+|+||+++++    ..++|+|||++......      
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~----~~~~l~dfg~~~~~~~~------  150 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH----GHVRISDLGLACDFSKK------  150 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC----CCEEEccCCcceecccc------
Confidence            9999999987666554443332                 33566999999876    56999999998754221      


Q ss_pred             cccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......|+..|+|||.+.+ ..++.++|||||||++|||++|..||.......      .....   ..           
T Consensus       151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~---~~-----------  210 (279)
T cd05633         151 KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------KHEID---RM-----------  210 (279)
T ss_pred             CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC------HHHHH---HH-----------
Confidence            1223568999999998864 558899999999999999999999996432210      00000   00           


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~  352 (381)
                       ........+..++.++.+++.+||..||++||     ++.++++
T Consensus       211 -~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         211 -TLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             -hhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence             00112223455678899999999999999999     5777744

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.98  E-value=4e-31  Score=236.61  Aligned_cols=224  Identities=19%  Similarity=0.327  Sum_probs=171.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|++|.||++...  +..+++|+...........+.+|++++++++|+||+++++++...+..++++||+++++|
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L   84 (253)
T cd05122           5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL   84 (253)
T ss_pred             eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcH
Confidence            467999999999999985  778889887655544567899999999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++... .......+..+                 |.+|+|.||++++.    +.++|+|||.+........     ..
T Consensus        85 ~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~----~~~~l~d~~~~~~~~~~~~-----~~  155 (253)
T cd05122          85 KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD----GEVKLIDFGLSAQLSDTKA-----RN  155 (253)
T ss_pred             HHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC----CeEEEeecccccccccccc-----cc
Confidence            9999775 33343332222                 23566999999876    5699999999876532111     34


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...|+..|+|||++.+..++.++||||||+++|+|++|+.||.....           ........            ..
T Consensus       156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~------------~~  212 (253)
T cd05122         156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----------MKALFKIA------------TN  212 (253)
T ss_pred             ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----------HHHHHHHH------------hc
Confidence            56789999999999888889999999999999999999999863211           00000000            00


Q ss_pred             ccCCC--CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSY--PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....  +..++..+.+++.+||+.||.+|||+.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         213 GPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             CCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            01111  1123678999999999999999999999975

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.98  E-value=4.6e-33  Score=241.42  Aligned_cols=254  Identities=17%  Similarity=0.158  Sum_probs=174.2

Q ss_pred             ccccccCCCceEEEEEEC------CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR------GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~------~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e  167 (381)
                      ...||+|.||.||+|.-.      .+.+|+|+++...+.  -....-||+.+++.|+|||||.|..+|.. +..+++++|
T Consensus        29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd  108 (438)
T KOG0666|consen   29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD  108 (438)
T ss_pred             cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence            467999999999999652      347888887665443  23557889999999999999999999887 888999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccc------------h----------HHHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          168 HVSGANLADCLRNPRNPSFTV------------L----------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~------------~----------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      |++ .+|...|+-++....++            +          ...|+||||+|||+..+++.++.|||+|||+++.+.
T Consensus       109 YAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~  187 (438)
T KOG0666|consen  109 YAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFN  187 (438)
T ss_pred             hhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhh
Confidence            996 79999997654221111            1          123568889999999998889999999999999875


Q ss_pred             cCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccc-cchhHHHHHHHHHc
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGY-RRVSVVDKASEAVA  303 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~  303 (381)
                      .+. ..-......+-|.+|+|||++.+. .|+.+.|||++|||+.||+|-++.|......-.... .....++.+...+.
T Consensus       188 ~pl-kpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG  266 (438)
T KOG0666|consen  188 NPL-KPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLG  266 (438)
T ss_pred             ccc-cccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcC
Confidence            322 122233456789999999998875 589999999999999999999999864322111110 11111222222211


Q ss_pred             CCc-cchh------hh------hcccccCCC--C------HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGV-GGVR------KW------VDRRLKDSY--P------VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~-~~~~------~~------~~~~~~~~~--~------~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ... ..+.      ++      +........  .      ..-++...+|+.++|+.||.+|.|++++++
T Consensus       267 ~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle  336 (438)
T KOG0666|consen  267 TPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE  336 (438)
T ss_pred             CCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence            100 0010      00      000000000  0      001234789999999999999999998854

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.98  E-value=4.6e-31  Score=279.80  Aligned_cols=236  Identities=23%  Similarity=0.395  Sum_probs=170.0

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ...||+|+||.||+|+.  .+..||+|+......    ....|++++++++|||||+++|+|.+.+..++|||||++|+|
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L  770 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL  770 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence            45689999999999997  478888887643222    223568999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccc-------h-------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          175 ADCLRNPRNPSFTV-------L-------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       175 ~~~l~~~~~~~~~~-------~-------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      .++++.-   .+..       +             ..+|++|+|+||+++.+.    ..++. ||......        .
T Consensus       771 ~~~l~~l---~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~----~~~~~-~~~~~~~~--------~  834 (968)
T PLN00113        771 SEVLRNL---SWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD----EPHLR-LSLPGLLC--------T  834 (968)
T ss_pred             HHHHhcC---CHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC----ceEEE-eccccccc--------c
Confidence            9999642   2111       1             123446678888887653    34544 55443321        1


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......      .....+|.......  .....+++
T Consensus       835 ~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~------~~~~~~~~~~~~~~--~~~~~~~~  906 (968)
T PLN00113        835 DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV------HGSIVEWARYCYSD--CHLDMWID  906 (968)
T ss_pred             CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC------CCcHHHHHHHhcCc--cchhheeC
Confidence            12236899999999999889999999999999999999999999532221      11233333222211  22334444


Q ss_pred             ccccC--CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          315 RRLKD--SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       315 ~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      +.+..  ..+.....++.+++.+||+.||++||+|.||++.|+++...
T Consensus       907 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        907 PSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             ccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence            44432  23445667889999999999999999999999999988663

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.97  E-value=2.6e-31  Score=243.56  Aligned_cols=228  Identities=19%  Similarity=0.253  Sum_probs=163.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ...||+|+||.||++.+.  ++.+++|+...... .....+.+|+.++.++. |+|||++++++...+..+++|||++ +
T Consensus         9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~   87 (288)
T cd06616           9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-I   87 (288)
T ss_pred             HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-C
Confidence            457999999999999985  78899998654332 24567889999999996 9999999999999999999999995 5


Q ss_pred             CHHHHhc---C--CCCCCccch------------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          173 NLADCLR---N--PRNPSFTVL------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       173 sL~~~l~---~--~~~~~~~~~------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|.++..   .  ....+...+                  ...|++|+|+||+++..    ..+||+|||+++.+...  
T Consensus        88 ~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~----~~~kl~dfg~~~~~~~~--  161 (288)
T cd06616          88 SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRN----GNIKLCDFGISGQLVDS--  161 (288)
T ss_pred             CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccC----CcEEEeecchhHHhccC--
Confidence            6655432   1  122322211                  23345677899999876    55999999999764321  


Q ss_pred             CccccccccCCCccccchhhhcCC---CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASG---VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                         .......|++.|+|||++.+.   .++.++|||||||++|||++|+.||....          ...+.......+. 
T Consensus       162 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----------~~~~~~~~~~~~~-  227 (288)
T cd06616         162 ---IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----------SVFDQLTQVVKGD-  227 (288)
T ss_pred             ---CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----------hHHHHHhhhcCCC-
Confidence               112334689999999998765   68999999999999999999999986321          1111111111110 


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             .+.+....+..++..+.+|+.+||+.||++||++.+|++
T Consensus       228 -------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         228 -------PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             -------CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                   111111222346778999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=2.1e-31  Score=245.41  Aligned_cols=239  Identities=19%  Similarity=0.213  Sum_probs=168.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-----cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-----DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|...  ++.|++|+.......     ....+.+|++++++++|+||+++++++.+.+.+++||||+
T Consensus         5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   84 (298)
T cd07841           5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM   84 (298)
T ss_pred             eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence            456899999999999984  789999987654322     2345778999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                       +|+|.+++.... ...+..+..+                 |.+|+|.||+++.+    +.++|+|||+++.....    
T Consensus        85 -~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~----~~~~l~dfg~~~~~~~~----  155 (298)
T cd07841          85 -ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD----GVLKLADFGLARSFGSP----  155 (298)
T ss_pred             -CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC----CCEEEccceeeeeccCC----
Confidence             899999998765 4444443332                 23556899999876    56999999999875321    


Q ss_pred             cccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-----
Q 016850          232 SGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-----  305 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  305 (381)
                      ........+++.|+|||++.+ ..++.++|||||||++|||++|.+||......        .............     
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~  227 (298)
T cd07841         156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI--------DQLGKIFEALGTPTEENW  227 (298)
T ss_pred             CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH--------HHHHHHHHHcCCCchhhh
Confidence            112233457889999998865 45789999999999999999998887632211        1111111100000     


Q ss_pred             --ccchhhhhcccccCC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 --VGGVRKWVDRRLKDS-----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 --~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ...+...........     .....+..+.++|.+||+.||++|||+.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         228 PGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             hhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence              000000000000011     11334678999999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.97  E-value=8.8e-31  Score=243.51  Aligned_cols=224  Identities=17%  Similarity=0.228  Sum_probs=164.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|+..  +..+++|+.......   ....+.+|++++++++|||||++++++.+++..++||||++ 
T Consensus        30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  108 (317)
T cd06635          30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-  108 (317)
T ss_pred             hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence            356999999999999974  678888876543222   34578899999999999999999999999999999999996 


Q ss_pred             CCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++.... ...+.++..                 +|.+|+|.||+++.+    ..+||+|||++.....       
T Consensus       109 g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~----~~~kl~dfg~~~~~~~-------  177 (317)
T cd06635         109 GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP----GQVKLADFGSASIASP-------  177 (317)
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC----CCEEEecCCCccccCC-------
Confidence            68888875432 333333222                 234566999999876    5699999998865321       


Q ss_pred             cccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          234 KVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       .....|++.|+|||++.   .+.++.++|||||||++|||++|+.||.....           .......         
T Consensus       178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----------~~~~~~~---------  236 (317)
T cd06635         178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHI---------  236 (317)
T ss_pred             -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-----------HHHHHHH---------
Confidence             22356889999999874   45688999999999999999999999853211           0101111         


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                        ............+++.+.+++.+||+.+|.+||++.++++.+-
T Consensus       237 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~  279 (317)
T cd06635         237 --AQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF  279 (317)
T ss_pred             --HhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence              1111111122345678999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=1.6e-31  Score=245.27  Aligned_cols=241  Identities=15%  Similarity=0.117  Sum_probs=163.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|...  ++.|++|........ ....+.+|+++++.++|+||+++++++.+++..|+||||+. +
T Consensus         9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~   87 (291)
T cd07870           9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-T   87 (291)
T ss_pred             EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-C
Confidence            4678999999999999874  789999987554333 23467889999999999999999999999999999999995 7


Q ss_pred             CHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..                 .|++|+|+||+++.+    +.+||+|||+++....    ....
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~----~~~~l~Dfg~~~~~~~----~~~~  159 (291)
T cd07870          88 DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYL----GELKLADFGLARAKSI----PSQT  159 (291)
T ss_pred             CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCC----CcEEEeccccccccCC----CCCC
Confidence            8887775432 223222222                 234567999999876    5699999999875422    1112


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC--------
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG--------  305 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  305 (381)
                      .....+++.|+|||++.+. .++.++|||||||++|||++|+.||......       ..............        
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  232 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-------FEQLEKIWTVLGVPTEDTWPGV  232 (291)
T ss_pred             CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-------HHHHHHHHHHcCCCChhhhhhh
Confidence            2344578999999988753 5788999999999999999999999643221       00000000000000        


Q ss_pred             --ccch-hhhhcccccCCC---C--HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 --VGGV-RKWVDRRLKDSY---P--VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 --~~~~-~~~~~~~~~~~~---~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .... ..+.........   .  ......+.+++.+||+.||.+|||+.|++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence              0000 000000000000   0  012467899999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=2e-32  Score=256.69  Aligned_cols=264  Identities=17%  Similarity=0.189  Sum_probs=172.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|...  ++.||+|+...... .....+.+|+.++++++||||+++++++...     ...++|||
T Consensus         9 i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e   88 (336)
T cd07849           9 NLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQE   88 (336)
T ss_pred             EEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEeh
Confidence            3567899999999999874  78899998753222 2456688899999999999999999987653     35799999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |++ ++|.+++.... .....+.                 ..|++|+|+||+++..    +.+||+|||++....... .
T Consensus        89 ~~~-~~l~~~~~~~~-l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~----~~~kl~dfg~~~~~~~~~-~  161 (336)
T cd07849          89 LME-TDLYKLIKTQH-LSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTN----CDLKICDFGLARIADPEH-D  161 (336)
T ss_pred             hcc-cCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCC----CCEEECcccceeeccccc-c
Confidence            995 69998886543 3322221                 2234667888888876    569999999997653211 1


Q ss_pred             ccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-ccc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-VGG  308 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  308 (381)
                      .........|++.|+|||.+.+ ..++.++|||||||++|+|++|++||......        ............. .+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--------~~~~~~~~~~~~~~~~~  233 (336)
T cd07849         162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--------HQLNLILGVLGTPSQED  233 (336)
T ss_pred             ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHcCCCCHHH
Confidence            1112234578999999998754 46889999999999999999999999642110        0000000000000 000


Q ss_pred             hh--------hh---hcccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH--HHHHHHHhhhhhhhcCCCc
Q 016850          309 VR--------KW---VDRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL--VSKMYLESKNWADKIGFPT  372 (381)
Q Consensus       309 ~~--------~~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~~~~~~~~~~~~~~~~~  372 (381)
                      +.        ..   ........   ..+..++.+.+++.+||+.||.+||++.++++.  ++.........-....+|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~~~  313 (336)
T cd07849         234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPFPF  313 (336)
T ss_pred             HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccCCCCCCh
Confidence            00        00   00000000   011346779999999999999999999999875  5544333222222234444


Q ss_pred             ce
Q 016850          373 DF  374 (381)
Q Consensus       373 ~~  374 (381)
                      |+
T Consensus       314 ~~  315 (336)
T cd07849         314 DF  315 (336)
T ss_pred             hh
Confidence            44

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-32  Score=249.69  Aligned_cols=242  Identities=16%  Similarity=0.203  Sum_probs=182.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecc---cccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      -+.||+||||.||-++.+  |+-+|.|+...   +.........+|..||.+++.+.||.+--.|+..+.+|+||..|.|
T Consensus       190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG  269 (591)
T KOG0986|consen  190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG  269 (591)
T ss_pred             eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence            356899999999988775  78888876432   2333456678899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.-+|.+.+  .+++..+..+                 .+||||+|||||+.    +++.|+|.|||..+..     .
T Consensus       270 GDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~----GhvRISDLGLAvei~~-----g  340 (591)
T KOG0986|consen  270 GDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDH----GHVRISDLGLAVEIPE-----G  340 (591)
T ss_pred             CceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccC----CCeEeeccceEEecCC-----C
Confidence            99999999877  4443333322                 24778999999998    6799999999987532     3


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||.+|||||++.++.|+...|.|||||++|||+.|+.||........        .+.+.+.+          
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk--------~eEvdrr~----------  402 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK--------REEVDRRT----------  402 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh--------HHHHHHHH----------
Confidence            344556999999999999999999999999999999999999999974332110        00111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-H-HHHHHHHHHHHhhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-Q-VTGLVSKMYLESKNWADK  367 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-e-vl~~L~~~~~~~~~~~~~  367 (381)
                        .....+++..+++++++|....|++||.+|.... + .-+.-++-+....||-.+
T Consensus       403 --~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rl  457 (591)
T KOG0986|consen  403 --LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRL  457 (591)
T ss_pred             --hcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHH
Confidence              0112346778899999999999999999998554 1 112233445555677544

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-32  Score=262.33  Aligned_cols=234  Identities=21%  Similarity=0.271  Sum_probs=185.8

Q ss_pred             ccccccCCCceEEEEEE--CC----ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTI--RG----KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~----~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||+||+|.+  ++    -+||+|++...... ...++..|+-+|.+|+|||+++|+|+|.... +.||++||
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m  779 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM  779 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence            46799999999999998  23    46788876443332 4678999999999999999999999998766 88999999


Q ss_pred             CCCCHHHHhcCCCC-CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPRN-PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~~-~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      |.|+|.+|++.++. ...+.++.|                 |++|..+|||+..-+    ++||+|||+++.+...... 
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~----hvkitdfgla~ll~~d~~e-  854 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN----HVKITDFGLAKLLAPDEKE-  854 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC----eEEEEecchhhccCccccc-
Confidence            99999999988653 333333333                 456669999999874    5999999999987542222 


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       .......-.+.|||-|.++...|+.++|||||||++||++| |..|+.....                       +.+.
T Consensus       855 -y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----------------------~eI~  910 (1177)
T KOG1025|consen  855 -YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----------------------EEIP  910 (1177)
T ss_pred             -ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----------------------HHhh
Confidence             22334455789999999999999999999999999999998 8888864432                       2234


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      +++....+...|+.++-++.-++.+||..|+..||+++++...+.++..+
T Consensus       911 dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  911 DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence            44555555677888999999999999999999999999999998887543

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=9e-31  Score=243.04  Aligned_cols=254  Identities=16%  Similarity=0.181  Sum_probs=169.6

Q ss_pred             ccccccCCCceEEEEEE----CCceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTI----RGKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~----~~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e  167 (381)
                      .+.||+|+||.||+|..    .+..||+|......   ....+.+.+|+.++++++||||+++++++.+.  +.+++|||
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   84 (316)
T cd07842           5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD   84 (316)
T ss_pred             EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence            45699999999999998    35889999876533   33356788999999999999999999999988  88999999


Q ss_pred             ccCCCCHHHHhcCCC-----CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          168 HVSGANLADCLRNPR-----NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~-----~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      |++ ++|.+++....     ......+..                 +|++|+|.||+++.++..++.+||+|||++..+.
T Consensus        85 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~  163 (316)
T cd07842          85 YAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN  163 (316)
T ss_pred             CCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence            996 67887775422     222222221                 2345679999998844445789999999998754


Q ss_pred             cCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCccccc-chhHHHHHHHHHc
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR-RVSVVDKASEAVA  303 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~  303 (381)
                      .... .........+++.|+|||++.+. .++.++|||||||++++|++|++||............ ...........+.
T Consensus       164 ~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  242 (316)
T cd07842         164 APLK-PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLG  242 (316)
T ss_pred             CCcc-cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhC
Confidence            3211 11223445789999999987764 5789999999999999999999999754433211000 0000111111110


Q ss_pred             CCc----------cchhhhhcccccCCCC---------H--HHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGV----------GGVRKWVDRRLKDSYP---------V--EVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~----------~~~~~~~~~~~~~~~~---------~--~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...          ..+....+......++         .  ..+.++.+++.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         243 TPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             CCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            000          0000000000000111         0  23457899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=3.1e-31  Score=242.24  Aligned_cols=224  Identities=14%  Similarity=0.197  Sum_probs=160.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHH-HhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSV-ICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|++.  ++.||+|........ ...++..|+.+ ++.++|||||++++++..++..|+||||++ |
T Consensus         6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~   84 (283)
T cd06617           6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-T   84 (283)
T ss_pred             EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-c
Confidence            467899999999999985  789999987554322 34556667775 556699999999999999999999999996 7


Q ss_pred             CHHHHhcCC----CCCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          173 NLADCLRNP----RNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       173 sL~~~l~~~----~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +|.+++...    ...++..+.                  ..|++|+|+||+++.+    ..+||+|||++..+..    
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~----~~~kl~dfg~~~~~~~----  156 (283)
T cd06617          85 SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRN----GQVKLCDFGISGYLVD----  156 (283)
T ss_pred             cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC----CCEEEeeccccccccc----
Confidence            888887542    123332221                  2234567888888876    5699999999876422    


Q ss_pred             ccccccccCCCccccchhhhcC----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                       ........|+..|+|||++.+    ..++.++|||||||++|+|++|+.||.....          ..+......    
T Consensus       157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----------~~~~~~~~~----  221 (283)
T cd06617         157 -SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT----------PFQQLKQVV----  221 (283)
T ss_pred             -ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc----------CHHHHHHHH----
Confidence             112233568999999998864    4568899999999999999999999853211          001111111    


Q ss_pred             cchhhhhcccccCCC-CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSY-PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             .. ..... ...++.++.+++.+||..+|++||++.++++
T Consensus       222 -------~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         222 -------EE-PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             -------hc-CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                   00 01111 1235678999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=7.5e-31  Score=235.77  Aligned_cols=229  Identities=19%  Similarity=0.307  Sum_probs=175.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~  170 (381)
                      .+.||+|++|.||+|...  ++.+++|+......  ...+.+.+|++++++++||||+++++.+.+.  +.+++||||++
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~   84 (260)
T cd06606           5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS   84 (260)
T ss_pred             eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecC
Confidence            467899999999999986  78899988755442  3467899999999999999999999999988  88999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++..........+..+                 |.+|+|.||+++.+    ..++|+|||.+........  ..
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~----~~~~l~d~~~~~~~~~~~~--~~  158 (260)
T cd06606          85 GGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSD----GVVKLADFGCAKRLGDIET--GE  158 (260)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC----CCEEEcccccEEecccccc--cc
Confidence            9999999987655444433332                 23456999999886    5699999999987533111  01


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......++..|+|||.+.+..++.++||||||+++++|++|..||.....          ......           ...
T Consensus       159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----------~~~~~~-----------~~~  217 (260)
T cd06606         159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----------PMAALY-----------KIG  217 (260)
T ss_pred             cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----------hHHHHH-----------hcc
Confidence            13346789999999999888899999999999999999999999964321          000000           011


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........+...+..+.+++.+||+.||.+||++.++++
T Consensus       218 ~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         218 SSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             ccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            111222344455788999999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=4.5e-31  Score=244.34  Aligned_cols=221  Identities=17%  Similarity=0.232  Sum_probs=163.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|...  ++.|++|+.......   ..+.+.+|+++++.++||||+++++++.+.+..++||||++ 
T Consensus        20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-   98 (307)
T cd06607          20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-   98 (307)
T ss_pred             heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-
Confidence            467999999999999984  788999987543322   34568899999999999999999999999999999999996 


Q ss_pred             CCHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++... .......+..+                 |.+|+|.||+++++    ..+||+|||++.....       
T Consensus        99 g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~----~~~kL~dfg~~~~~~~-------  167 (307)
T cd06607          99 GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEP----GTVKLADFGSASLVSP-------  167 (307)
T ss_pred             CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCC----CCEEEeecCcceecCC-------
Confidence            7887777542 23333333222                 23456888888876    5699999999875421       


Q ss_pred             cccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          234 KVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       .....|++.|+|||++.   ...++.++||||||+++|||++|+.||.....           .........       
T Consensus       168 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~-----------~~~~~~~~~-------  228 (307)
T cd06607         168 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIAQ-------  228 (307)
T ss_pred             -CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH-----------HHHHHHHhc-------
Confidence             12356889999999874   35688999999999999999999999853211           000001000       


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          .......+..++..+.+++.+||..||++||++.+++.
T Consensus       229 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         229 ----NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             ----CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                00011112346678999999999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.97  E-value=4.9e-31  Score=241.25  Aligned_cols=240  Identities=20%  Similarity=0.227  Sum_probs=167.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|.+.  ++.|++|+......  ...+.+.+|+.++++++||||+++++++.+++.+++||||+ ++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~   83 (286)
T cd07832           5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PS   83 (286)
T ss_pred             EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CC
Confidence            467999999999999984  78899998765442  23567999999999999999999999999999999999999 99


Q ss_pred             CHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... .....++..                 .|.+|+|.||+++..    ..++|+|||++......   ....
T Consensus        84 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~----~~~~l~dfg~~~~~~~~---~~~~  156 (286)
T cd07832          84 DLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD----GVLKIADFGLARLFSEE---EPRL  156 (286)
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC----CcEEEeeeeecccccCC---CCCc
Confidence            9999986533 333333222                 223566888888875    56999999999875321   1112


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-------c
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-------V  306 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  306 (381)
                      .....|+..|+|||++.+. .++.++||||||+++|||++|.+||....+.        .............       .
T Consensus       157 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  228 (286)
T cd07832         157 YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI--------EQLAIVFRTLGTPNEETWPGL  228 (286)
T ss_pred             cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH--------HHHHHHHHHcCCCChHHHhhc
Confidence            3345789999999988654 4689999999999999999998888532210        0111110000000       0


Q ss_pred             cchhhh---hccccc----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKW---VDRRLK----DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~---~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+..+   ..+...    .......+..+.+|+.+||+.||.+||+++++++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         229 TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            000000   000000    0001134578999999999999999999999975

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.97  E-value=2.8e-31  Score=242.73  Aligned_cols=238  Identities=16%  Similarity=0.236  Sum_probs=165.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||.|++|.||+|+..  ++.|++|+.......  ....+.+|++++++++||||+++++++.+.+..++||||+. +
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~   83 (284)
T cd07860           5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q   83 (284)
T ss_pred             eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-c
Confidence            467899999999999984  788999876543322  34678899999999999999999999999999999999995 7


Q ss_pred             CHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|..++....  ......+..+                 |.+|+|.||+++++    +.+||+|||++..+...    ..
T Consensus        84 ~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~----~~~~l~dfg~~~~~~~~----~~  155 (284)
T cd07860          84 DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE----GAIKLADFGLARAFGVP----VR  155 (284)
T ss_pred             CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC----CCEEEeeccchhhcccC----cc
Confidence            8999886533  2333332222                 23556899999887    56999999998765321    11


Q ss_pred             cccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc------
Q 016850          234 KVNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV------  306 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  306 (381)
                      ......+++.|+|||++.+.. ++.++|||||||++|||+||+.||.......       .... .........      
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~  227 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-------QLFR-IFRTLGTPDEVVWPG  227 (284)
T ss_pred             ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-------HHHH-HHHHhCCCChhhhhh
Confidence            223345789999999876644 5889999999999999999999996432110       0000 000000000      


Q ss_pred             --------cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 --------GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 --------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ..+..+....... ....+++.+.++|.+||+.||++||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         228 VTSLPDYKPSFPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             hhHHHHHHhhcccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence                    0000000000000 01234567899999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.4e-31  Score=235.54  Aligned_cols=225  Identities=19%  Similarity=0.325  Sum_probs=173.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|++|.||+|+..  ++.+++|.......  ...+.+.+|++++++++|+||+++++++.+.+..++||||++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (254)
T cd06627           5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG   84 (254)
T ss_pred             eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence            467899999999999885  67899988765543  34678999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++......+...+..+                 |.+|+|+||+++.+    ..++|+|||++.......    ...
T Consensus        85 ~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~----~~~~l~d~~~~~~~~~~~----~~~  156 (254)
T cd06627          85 SLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD----GVVKLADFGVATKLNDVS----KDD  156 (254)
T ss_pred             cHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC----CCEEEeccccceecCCCc----ccc
Confidence            99999987655544433322                 33566999999885    569999999998753311    112


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....|+..|+|||.+.+..++.++||||||+++|+|++|+.||.....           ........            .
T Consensus       157 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~------------~  213 (254)
T cd06627         157 ASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----------MAALFRIV------------Q  213 (254)
T ss_pred             cccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----------HHHHHHHh------------c
Confidence            345689999999998877789999999999999999999999863211           00000000            0


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..++..+.+++.+||..+|++||++.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         214 DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            1112234455778999999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=5.9e-31  Score=236.49  Aligned_cols=225  Identities=16%  Similarity=0.258  Sum_probs=172.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||.|+||.||++.+.  +..+++|+......  .....+.+|+++++.++|||++++++.+...+..++||||++++
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~   84 (258)
T cd08215           5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGG   84 (258)
T ss_pred             EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCC
Confidence            467899999999999986  78899998765433  35677899999999999999999999999999999999999999


Q ss_pred             CHHHHhcCC----CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRNP----RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~~----~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.+++...    .......+..+                 |.+|+|.||++++.    ..++|+|||++......    
T Consensus        85 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~----~~~~l~d~~~~~~~~~~----  156 (258)
T cd08215          85 DLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN----GLVKLGDFGISKVLSST----  156 (258)
T ss_pred             cHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC----CcEEECCccceeecccC----
Confidence            999999764    33333332222                 23456899999876    56999999999765331    


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........|++.|+|||.+.+..++.++||||+|+++++|++|+.||.....           ........         
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----------~~~~~~~~---------  216 (258)
T cd08215         157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----------LELALKIL---------  216 (258)
T ss_pred             cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----------HHHHHHHh---------
Confidence            1223445789999999999888899999999999999999999999853211           11111111         


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .......+..++..+.+++.+||..+|++||++.++++
T Consensus       217 ---~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         217 ---KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             ---cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               11112223345678999999999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.1e-33  Score=276.32  Aligned_cols=251  Identities=16%  Similarity=0.225  Sum_probs=193.4

Q ss_pred             hcCC-cccccccCCCceEEEEEEC--CceEEEEEecc---cccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           92 TNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+| ..+.||+|+||.|..++++  ++-||+|++..   -...+..-|..|-.||-.-+.+=||+++-.|.|++++|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            3455 4567899999999999996  67788887644   2233567799999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||+||+|..+|......++..                 +..+|+||||.|||++..    +++||+|||.+..+..  
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~----GHikLADFGsClkm~~--  227 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKS----GHIKLADFGSCLKMDA--  227 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEeccc----CcEeeccchhHHhcCC--
Confidence            99999999999998877555333                 334567899999999998    7799999998876532  


Q ss_pred             CCccccccccCCCccccchhhhc----C-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQA----S-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                       +........+|||-|++||++.    + +.|+..+|.||+||++|||+.|.-||...           .+.+....+  
T Consensus       228 -dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----------slveTY~KI--  293 (1317)
T KOG0612|consen  228 -DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----------SLVETYGKI--  293 (1317)
T ss_pred             -CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----------HHHHHHHHH--
Confidence             2334556789999999999986    3 57999999999999999999999999632           233332222  


Q ss_pred             CCccchhhhhcccccCCCC--HHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCc
Q 016850          304 GGVGGVRKWVDRRLKDSYP--VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPT  372 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~  372 (381)
                               .+..-...+|  ..+++.+++||++.+. +|+.|..-.-|-+.-.+-+.++.+|+..-+..+
T Consensus       294 ---------m~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~p  354 (1317)
T KOG0612|consen  294 ---------MNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVP  354 (1317)
T ss_pred             ---------hchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCC
Confidence                     2222122334  4588999999998876 588999844444446688999999977665543

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=5.4e-31  Score=236.84  Aligned_cols=223  Identities=16%  Similarity=0.184  Sum_probs=169.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||++...  ++.+++|......  ......+.+|++++++++|+||+++++++.+....++||||++++
T Consensus         5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   84 (256)
T cd08530           5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG   84 (256)
T ss_pred             eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence            467999999999999874  6788888865432  224567788999999999999999999999999999999999999


Q ss_pred             CHHHHhcCC----CCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRNP----RNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~~----~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.+++...    .......+..                 +|.+|+|.||++++.    ..+||+|||++......    
T Consensus        85 ~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~----~~~kl~d~g~~~~~~~~----  156 (256)
T cd08530          85 DLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN----DLVKIGDLGISKVLKKN----  156 (256)
T ss_pred             CHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC----CcEEEeeccchhhhccC----
Confidence            999998662    2223222211                 233556889998885    55999999999875331    


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                        ......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||......        ...               .
T Consensus       157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--------~~~---------------~  211 (256)
T cd08530         157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--------DLR---------------Y  211 (256)
T ss_pred             --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHH---------------H
Confidence              222356889999999998888999999999999999999999998632210        000               0


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+.....+..+..++.++.+++.+||..+|++||++.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         212 KVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11111122334467788999999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=7.9e-31  Score=240.97  Aligned_cols=239  Identities=16%  Similarity=0.230  Sum_probs=166.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.  ++.+++|..+.....  ....+.+|+.++++++||||+++++++...  +..|+||||++
T Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~   89 (293)
T cd07843          10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE   89 (293)
T ss_pred             hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC
Confidence            467899999999999985  678888887544322  234577899999999999999999999877  88999999996


Q ss_pred             CCCHHHHhcCCCC-CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPRN-PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~~-~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                       ++|.+++..... .....+..+                 |.+|+|+||+++.+    +.+||+|||++..+....    
T Consensus        90 -~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~----~~~~l~d~g~~~~~~~~~----  160 (293)
T cd07843          90 -HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNR----GILKICDFGLAREYGSPL----  160 (293)
T ss_pred             -cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCC----CcEEEeecCceeeccCCc----
Confidence             699999876432 333332222                 23566999999876    569999999998754311    


Q ss_pred             ccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc--------
Q 016850          233 GKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA--------  303 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--------  303 (381)
                      .......+++.|+|||.+.+. .++.++||||||+++|+|++|.+||......        ...........        
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~--------~~~~~~~~~~~~~~~~~~~  232 (293)
T cd07843         161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI--------DQLNKIFKLLGTPTEKIWP  232 (293)
T ss_pred             cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCchHHHH
Confidence            222345678999999988754 4689999999999999999999999643211        11111000000        


Q ss_pred             -------CCccchhhhhcccccCCCCHH-HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 -------GGVGGVRKWVDRRLKDSYPVE-VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 -------~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             .....+.......+...++.. +++.+.++|.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence                   000000000011111222222 4778999999999999999999999975

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=4.3e-31  Score=246.78  Aligned_cols=258  Identities=12%  Similarity=0.167  Sum_probs=168.6

Q ss_pred             ccccC--CCceEEEEEE--CCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSS--SASASWRGTI--RGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G--~~g~V~~~~~--~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||.|  +||+||++.+  .++.||+|+.......  ..+.+.+|+.+++.++|||||+++++|..++..++||||+++|
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46655  8999999998  4899999987654322  3567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCC--CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPRN--PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~~--~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++.....  .+...+.                 ..|++|+|+||+++.+    ..++++||+.+............
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~----~~~~~~~~~~~~~~~~~~~~~~~  160 (328)
T cd08226          85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD----GLVSLSGLSHLYSLVRNGQKAKV  160 (328)
T ss_pred             CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC----CcEEEechHHHhhhhccCccccc
Confidence            99999986432  3322221                 2345677999999876    55999999865432111101000


Q ss_pred             ---cccccCCCccccchhhhcCC--CCCcchhHHHHHHHHHHHHhCCccccccccCCcc-------cccch--hHHHHHH
Q 016850          234 ---KVNKIEGTRGYMAPEFQASG--VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID-------GYRRV--SVVDKAS  299 (381)
Q Consensus       234 ---~~~~~~gt~~y~aPE~~~~~--~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~-------~~~~~--~~~~~~~  299 (381)
                         ......++..|+|||++.+.  .++.++|||||||++|||++|+.||.........       .+...  .......
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (328)
T cd08226         161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEE  240 (328)
T ss_pred             cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhh
Confidence               01122356789999998763  4789999999999999999999999643211000       00000  0000000


Q ss_pred             HHHcCC--------ccch------hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH--HHHHHHHHH
Q 016850          300 EAVAGG--------VGGV------RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT--GLVSKMYLE  360 (381)
Q Consensus       300 ~~~~~~--------~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl--~~L~~~~~~  360 (381)
                      ......        .+..      .......+....+..+++.+.+|+.+||+.||++|||+.|++  .+++.+..+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         241 SRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             hhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence            000000        0000      000011112222345778899999999999999999999996  455555444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=4.1e-31  Score=242.54  Aligned_cols=241  Identities=19%  Similarity=0.244  Sum_probs=174.4

Q ss_pred             ccccccCCCceEEEEEE-----CCceEEEEEeccccc----ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTI-----RGKDVIIFQRKLRRS----LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~~----~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      .+.||+|+||.||++..     ++..||+|.......    ...+.+.+|+++++++ +|+||+++++++..++.+++||
T Consensus         5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (290)
T cd05613           5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL   84 (290)
T ss_pred             eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence            46799999999999986     467899988654221    2346788899999999 6999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++++|.+++..........+..+                 |++|+|.||+++.+    +.+||+|||++..+..   
T Consensus        85 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~----~~~kl~dfg~~~~~~~---  157 (290)
T cd05613          85 DYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSN----GHVVLTDFGLSKEFHE---  157 (290)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCC----CCEEEeeCccceeccc---
Confidence            99999999999987665554433322                 23566999999876    5699999999976432   


Q ss_pred             CccccccccCCCccccchhhhcCC--CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASG--VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                      ..........|+..|+|||.+.+.  .++.++||||||+++|+|++|+.||.......       ..........     
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-------~~~~~~~~~~-----  225 (290)
T cd05613         158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-------SQAEISRRIL-----  225 (290)
T ss_pred             ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc-------cHHHHHHHhh-----
Confidence            111222345689999999988653  46789999999999999999999986321110       0111111100     


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                             . ....++..+++.+.+++.+||+.||++||     ++.++   ++.-+.+..+|++.
T Consensus       226 -------~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l---~~~~~~~~~~~~~~  279 (290)
T cd05613         226 -------K-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEI---KKHPFFQKINWDDL  279 (290)
T ss_pred             -------c-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHH---HcCcccccCCHHHH
Confidence                   0 01223444667899999999999999998     44444   44555666678765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=2.6e-31  Score=248.83  Aligned_cols=245  Identities=17%  Similarity=0.170  Sum_probs=168.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe----CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS----GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|...  ++.|++|+......  .....+.+|+.+|++++||||+++++++..    ...+++||||
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~   89 (334)
T cd07855          10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL   89 (334)
T ss_pred             eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence            567899999999999874  78899998754322  245678889999999999999999998763    4568999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +. |+|.+++..........+..+                 |++|+|+||+++++    +.+||+|||++..........
T Consensus        90 ~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~----~~~kl~dfg~~~~~~~~~~~~  164 (334)
T cd07855          90 ME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNED----CELRIGDFGMARGLSSSPTEH  164 (334)
T ss_pred             hh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC----CcEEecccccceeecccCcCC
Confidence            95 799999987665554443332                 23566999999886    569999999997653322222


Q ss_pred             cccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcc-------cccchhHHHHHHHHHc
Q 016850          232 SGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID-------GYRRVSVVDKASEAVA  303 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~-------~~~~~~~~~~~~~~~~  303 (381)
                      ........|+..|+|||++.+ ..++.++|||||||++|||++|+.||.........       ..+.....+...    
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~----  240 (334)
T cd07855         165 KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG----  240 (334)
T ss_pred             CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc----
Confidence            222234578999999998765 45889999999999999999999999642210000       000000000000    


Q ss_pred             CCccchhhhhccc-ccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRR-LKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~-~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .+.+....... .....     ....+.++.++|.+||+.||.+||++.++++
T Consensus       241 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         241 --SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             --hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence              00000100000 00001     1234678999999999999999999998866

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=6e-31  Score=244.16  Aligned_cols=245  Identities=14%  Similarity=0.147  Sum_probs=165.9

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEeccc--ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLR--RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ++.+|.|+++.||++...++.||+|+....  .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|+|
T Consensus         7 ~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216           7 GKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             hHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence            344566666777777777999999997654  223567899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC---cc
Q 016850          175 ADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---ES  232 (381)
Q Consensus       175 ~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---~~  232 (381)
                      .+++....  ..+...+..                 .|++|+|+||+++.+    +.+||+|||.+..+......   ..
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~----~~~kl~d~~~~~~~~~~~~~~~~~~  162 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD----GKVVLSGLRYSVSMIKHGKRQRVVH  162 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC----CceEEecCccceeeccccccccccc
Confidence            99997642  223222222                 223566888888776    55999999988754221110   11


Q ss_pred             ccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH----------
Q 016850          233 GKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE----------  300 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----------  300 (381)
                      .......++..|+|||++..  ..++.++|||||||++|||++|+.||.......       ...+....          
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~~  235 (314)
T cd08216         163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-------MLLEKVRGTVPCLLDKST  235 (314)
T ss_pred             cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhccCccccccCc
Confidence            11234557889999999875  358899999999999999999999997432110       00000000          


Q ss_pred             --HHcCCcc-----chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 --AVAGGVG-----GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 --~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .......     .................++.++.+|+.+||+.||++|||+.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         236 YPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             hhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence              0000000     000000000111223456778999999999999999999999976

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.97  E-value=1.4e-30  Score=237.54  Aligned_cols=235  Identities=15%  Similarity=0.179  Sum_probs=165.5

Q ss_pred             ccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHH---HHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           99 KFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLS---VICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~---il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .||+|+||.||+|...  ++.||+|........   ....+..|..   .++...||||+++++++.+.+.+++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            3799999999999874  778999986543211   1222334433   4445689999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++......++..+..++                 ++|+|+||+++.+    ..+||+|||++..+..      .
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~----~~~kl~dfg~~~~~~~------~  150 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH----GHVRISDLGLACDFSK------K  150 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC----CCEEEccCcCccccCc------c
Confidence            99999999776655555544332                 3456888888876    5699999999875422      1


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......|+..|+|||++.++ .++.++|||||||++|||++|+.||........        .. .....          
T Consensus       151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--------~~-~~~~~----------  211 (278)
T cd05606         151 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--------HE-IDRMT----------  211 (278)
T ss_pred             CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--------HH-HHHHh----------
Confidence            12245799999999998754 689999999999999999999999964321100        00 00000          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                        .......+..++..+.+++.+||..||.+||     ++.++++   .-+....+|...
T Consensus       212 --~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~---~~~~~~~~~~~~  266 (278)
T cd05606         212 --LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE---HPFFRSLDWQMV  266 (278)
T ss_pred             --hccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh---CccccCCCchHh
Confidence              0011223334578899999999999999999     8888853   333333444443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=1.5e-30  Score=240.79  Aligned_cols=241  Identities=17%  Similarity=0.229  Sum_probs=163.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC--------eee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGN--------CGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--------~~~  163 (381)
                      ..+.||+|+||.||+|...  ++.||+|+.......  ....+.+|++++++++||||+++++++...+        ..+
T Consensus        16 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   95 (310)
T cd07865          16 KLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFY   95 (310)
T ss_pred             EEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEE
Confidence            4577999999999999985  788999876543222  2345678999999999999999999987643        459


Q ss_pred             EEEeccCCCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          164 LVYEHVSGANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      +||||+. ++|.+++.... ...+..+..                 .|.+|+|+||+++..    ..+||+|||++....
T Consensus        96 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~----~~~kl~dfg~~~~~~  170 (310)
T cd07865          96 LVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD----GILKLADFGLARAFS  170 (310)
T ss_pred             EEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC----CcEEECcCCCccccc
Confidence            9999995 68988887643 333333222                 223566889888876    569999999998654


Q ss_pred             cCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc-
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA-  303 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-  303 (381)
                      ..............++..|+|||++.+. .++.++||||||+++|||++|++||......        ........... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--------~~~~~~~~~~~~  242 (310)
T cd07865         171 LSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--------HQLTLISQLCGS  242 (310)
T ss_pred             CCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCC
Confidence            3222222223345688999999988664 4688999999999999999999998643211        00011111000 


Q ss_pred             ------CCcc------------chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 ------GGVG------------GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ------~~~~------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            ....            .........+.   +......+.+||.+||..||.+||+++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLK---PYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CChhhcccccchhhhhhccCCCccchhhHHhcc---cccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence                  0000            00000000000   0112456789999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=1.1e-30  Score=240.07  Aligned_cols=241  Identities=15%  Similarity=0.189  Sum_probs=164.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|++|.||+|...  ++.|++|+......  ...+.+.+|++++++++||||+++++++.+.+..++||||++ 
T Consensus         6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-   84 (294)
T PLN00009          6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-   84 (294)
T ss_pred             EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-
Confidence            3567899999999999975  67899988654332  234678899999999999999999999999999999999995 


Q ss_pred             CCHHHHhcCCCCC--Cccch-------HHHH----------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPRNP--SFTVL-------STWL----------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~~~--~~~~~-------~~~~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|.+++......  ....+       ...+          ++|+|+||+++..+   ..+||+|||++......    .
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~---~~~kl~dfg~~~~~~~~----~  157 (294)
T PLN00009         85 LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT---NALKLADFGLARAFGIP----V  157 (294)
T ss_pred             ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC---CEEEEcccccccccCCC----c
Confidence            6898888654432  22222       2222          34558888887543   45899999999764321    1


Q ss_pred             ccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc-------C
Q 016850          233 GKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA-------G  304 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-------~  304 (381)
                      .......|++.|+|||++.+. .++.++|||||||++|+|++|++||......        ...........       .
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~  229 (294)
T PLN00009        158 RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI--------DELFKIFRILGTPNEETWP  229 (294)
T ss_pred             cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCChhhcc
Confidence            122345678999999988764 5789999999999999999999999643211        00000000000       0


Q ss_pred             Cccchhhhhc--ccccC----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGVRKWVD--RRLKD----SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~~~~~~--~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +...+..+..  +....    ...+..++.+.+++.+||+.||++||++.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        230 GVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             ccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000000000  00000    011234677999999999999999999999976

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=2.3e-31  Score=250.04  Aligned_cols=262  Identities=18%  Similarity=0.206  Sum_probs=175.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--------------
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG--------------  159 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--------------  159 (381)
                      ..+.||.|+||.||+|...  ++.|++|+.........+.+.+|++++++++||||+++++++...              
T Consensus         9 ~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   88 (342)
T cd07854           9 DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTEL   88 (342)
T ss_pred             EEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccccccc
Confidence            4577999999999999885  788999987666655667889999999999999999999876653              


Q ss_pred             CeeeEEEeccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccccc
Q 016850          160 NCGYLVYEHVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      ...|+||||++ ++|.+++.... .....+..                 .|++|+|+||+++..+   ..+||+|||++.
T Consensus        89 ~~~~lv~e~~~-~~L~~~~~~~~-l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~---~~~kl~dfg~~~  163 (342)
T cd07854          89 NSVYIVQEYME-TDLANVLEQGP-LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED---LVLKIGDFGLAR  163 (342)
T ss_pred             ceEEEEeeccc-ccHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC---ceEEECCcccce
Confidence            35789999996 69998886543 33333222                 2345668999987543   568999999997


Q ss_pred             ccccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          223 LCGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       223 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      .+..... .........|+..|+|||++.+ ..++.++|||||||++|+|++|+.||.......        ........
T Consensus       164 ~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~--------~~~~~~~~  234 (342)
T cd07854         164 IVDPHYS-HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE--------QMQLILES  234 (342)
T ss_pred             ecCCccc-cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHHh
Confidence            6532111 1111233468899999997654 467889999999999999999999996332100        00000000


Q ss_pred             H-cCC-------ccchhhhhc-ccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhh
Q 016850          302 V-AGG-------VGGVRKWVD-RRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       302 ~-~~~-------~~~~~~~~~-~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                      . ...       ...+..... .......     ....+.++.+|+.+||+.||.+||++.++++         +.|...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~---------h~~~~~  305 (342)
T cd07854         235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM---------HPYMSC  305 (342)
T ss_pred             cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC---------CCcccc
Confidence            0 000       000000000 0000000     1134567899999999999999999999965         355555


Q ss_pred             cCCCcceeEeecC
Q 016850          368 IGFPTDFSVSMAP  380 (381)
Q Consensus       368 ~~~~~~~~~~~~~  380 (381)
                      ...|.+.-++.+|
T Consensus       306 ~~~~~~~~~~~~~  318 (342)
T cd07854         306 YSCPFDEPVSLHP  318 (342)
T ss_pred             ccCCccccCCCCC
Confidence            5666666665554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-32  Score=247.10  Aligned_cols=235  Identities=16%  Similarity=0.194  Sum_probs=171.9

Q ss_pred             cccccCCCceEEEEEE--CCceEEEEEeccccccc-------HHHHHHHHHHHhhcCCCCcceEEEEEE-eCCeeeEEEe
Q 016850           98 KKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLD-------LEQLRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYE  167 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lv~e  167 (381)
                      ..||+|||+.||+|.+  ..+.||||+-.......       .+...+|..|.+.|+||.||++|++|. +.+.+|-|+|
T Consensus       469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLE  548 (775)
T KOG1151|consen  469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLE  548 (775)
T ss_pred             HHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeee
Confidence            3579999999999987  47778888754443321       234568999999999999999999987 6788999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHH-------------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTW-------------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~-------------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||+|.+|+-||+.++...++.+..+                   +.||||.||||-+.+ .-+.+||+|||+++......
T Consensus       549 YceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt-acGeIKITDFGLSKIMdddS  627 (775)
T KOG1151|consen  549 YCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT-ACGEIKITDFGLSKIMDDDS  627 (775)
T ss_pred             ecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc-ccceeEeeecchhhhccCCc
Confidence            9999999999999887776654433                   336789999998743 33679999999999875432


Q ss_pred             CCc---cccccccCCCccccchhhhcCC----CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          229 GNE---SGKVNKIEGTRGYMAPEFQASG----VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       229 ~~~---~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      .+.   ........||.+|++||.+.-+    +++.++||||+|||+|.++.|+.||.......       .+++.    
T Consensus       628 y~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-------dILqe----  696 (775)
T KOG1151|consen  628 YNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-------DILQE----  696 (775)
T ss_pred             cCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-------HHHhh----
Confidence            221   1234567899999999976533    57899999999999999999999996432211       01110    


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                           ..+...  ....-+.-+.++.++.++|.+||++.-++|....++.
T Consensus       697 -----NTIlkA--tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  697 -----NTILKA--TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             -----hchhcc--eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence                 000000  0011111245778899999999999999998877664

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=2.9e-32  Score=250.98  Aligned_cols=250  Identities=19%  Similarity=0.254  Sum_probs=183.7

Q ss_pred             HHhcCCcccccccCCCceEEEEEEC--CceEEEEEeccccc-c-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           90 AATNNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-L-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        90 ~~~~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ....-|..+.||+|.||+||-|.++  |+.||||++....- . ...++++|+.||++++||.||.|.-.|+..+..++|
T Consensus       562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVV  641 (888)
T KOG4236|consen  562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVV  641 (888)
T ss_pred             HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEE
Confidence            3344577889999999999999985  89999998744322 2 467899999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcC--CCCCCc-------cchHHHHHH----------hhhcceeecccCCCccceEEccccccccccc
Q 016850          166 YEHVSGANLADCLRN--PRNPSF-------TVLSTWLSR----------MQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~--~~~~~~-------~~~~~~~~~----------l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      ||-+ .|+..+.|-.  .+++++       .|++..+++          |||+||||.+.. .-.++||||||+|+.++.
T Consensus       642 MEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~-~FPQvKlCDFGfARiIgE  719 (888)
T KOG4236|consen  642 MEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS-PFPQVKLCDFGFARIIGE  719 (888)
T ss_pred             ehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC-CCCceeeccccceeecch
Confidence            9999 5787777643  233432       234444554          457777776542 223699999999998743


Q ss_pred             CCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                           ..-....+|||.|+|||++++..|+..-|+||.|||+|.-++|..||....          .+.+++.....   
T Consensus       720 -----ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE----------dIndQIQNAaF---  781 (888)
T KOG4236|consen  720 -----KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE----------DINDQIQNAAF---  781 (888)
T ss_pred             -----hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc----------chhHHhhcccc---
Confidence                 334557899999999999999999999999999999999999999996321          12222111000   


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh-hhhhhcCCC
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK-NWADKIGFP  371 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~-~~~~~~~~~  371 (381)
                               -+.+....++++.++|||...|+..-.+|-|....+   .+.+++.- -|-++-+|.
T Consensus       782 ---------MyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l---sh~Wlq~yq~w~DLRelE  835 (888)
T KOG4236|consen  782 ---------MYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL---SHPWLQDYQTWLDLRELE  835 (888)
T ss_pred             ---------ccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc---cchhhhcchHHHHHHHHH
Confidence                     012233567889999999999999999999977654   33333322 455544433

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=8e-31  Score=239.59  Aligned_cols=239  Identities=15%  Similarity=0.187  Sum_probs=166.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||.|++|.||+|.+.  +..|++|+.......  ..+.+.+|++++++++||||+++++++.+.+..++||||++ +
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~   82 (283)
T cd07835           4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-L   82 (283)
T ss_pred             heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-c
Confidence            467899999999999874  888999987554322  34678899999999999999999999999999999999994 7


Q ss_pred             CHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++....  ...+..+..+                 |.+|+|.||+++.+    ..++|+|||+++.....    ..
T Consensus        83 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~----~~~~l~df~~~~~~~~~----~~  154 (283)
T cd07835          83 DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDRE----GALKLADFGLARAFGVP----VR  154 (283)
T ss_pred             CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC----CcEEEeecccccccCCC----cc
Confidence            9999997755  3443333332                 23456889998885    56999999999764321    11


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc------
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV------  306 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  306 (381)
                      ......++..|+|||++.+. .++.++||||||+++|+|++|++||.......       .... .........      
T Consensus       155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-------~~~~-~~~~~~~~~~~~~~~  226 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-------QLFR-IFRTLGTPDEDVWPG  226 (283)
T ss_pred             ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHH-HHHHhCCCChHHhhh
Confidence            12234578999999987654 56889999999999999999999996432100       0000 000000000      


Q ss_pred             -c---chhhhhccc---ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 -G---GVRKWVDRR---LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 -~---~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .   .+...+...   ........++..+.+++.+||+.||++||++.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         227 VTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence             0   000000000   000112234578999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=2.3e-30  Score=240.21  Aligned_cols=221  Identities=17%  Similarity=0.222  Sum_probs=161.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ...||+|+||.||+|+..  ++.+++|+.......   ....+.+|+++++.++||||+++++++.+.+..|+||||+. 
T Consensus        26 ~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  104 (313)
T cd06633          26 LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-  104 (313)
T ss_pred             ceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-
Confidence            466999999999999874  778888886543222   34568889999999999999999999999999999999995 


Q ss_pred             CCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++.... ......+..+                 |.+|+|.||+++++    ..+||+|||++....        
T Consensus       105 ~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~----~~~kL~dfg~~~~~~--------  172 (313)
T cd06633         105 GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP----GQVKLADFGSASKSS--------  172 (313)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC----CCEEEeecCCCcccC--------
Confidence            78888876533 3333332222                 23456888888876    559999999885421        


Q ss_pred             cccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          234 KVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ......|+..|+|||++.   ...++.++|||||||++|+|++|.+||.....           .........       
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----------~~~~~~~~~-------  234 (313)
T cd06633         173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIAQ-------  234 (313)
T ss_pred             CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHh-------
Confidence            123456899999999874   45688999999999999999999999853211           111111110       


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          ..........++..+.+|+.+||+.+|.+||++.+++.
T Consensus       235 ----~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         235 ----NDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             ----cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                00111112234567999999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=1.9e-30  Score=244.87  Aligned_cols=245  Identities=19%  Similarity=0.158  Sum_probs=164.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc--ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR--RSLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv  165 (381)
                      ..+.||+|+||.||+|+..  ++.||+|.....  .......+.+|+.++++++||||+++++++...      ...|+|
T Consensus        20 ~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv   99 (353)
T cd07850          20 NLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLV   99 (353)
T ss_pred             EEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEE
Confidence            4567999999999999984  788999986432  222346778899999999999999999988643      357999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccch-------H----------HHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVL-------S----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~-------~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ ++|.+.+...  .....+       .          ..|++|+|+||+++.+    +.+||+|||+++....  
T Consensus       100 ~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~----~~~kL~Dfg~~~~~~~--  170 (353)
T cd07850         100 MELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTAGT--  170 (353)
T ss_pred             EeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC----CCEEEccCccceeCCC--
Confidence            99995 7999888654  332222       1          1234567889888876    5699999999986432  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc-------cccchhHHHHHH--
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID-------GYRRVSVVDKAS--  299 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~-------~~~~~~~~~~~~--  299 (381)
                         ........|++.|+|||++.+..++.++|||||||++|+|++|+.||.........       ..+...+.+...  
T Consensus       171 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T cd07850         171 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT  247 (353)
T ss_pred             ---CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence               11123456899999999999889999999999999999999999999643210000       000000000000  


Q ss_pred             --HHHcCCc----cchhhhhccccc----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          300 --EAVAGGV----GGVRKWVDRRLK----DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       300 --~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .......    ..+.+.+.....    ...+...++.+.+++.+||+.||++|||+.|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              0000000    000011111000    0012234667899999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=3.1e-30  Score=235.78  Aligned_cols=239  Identities=13%  Similarity=0.165  Sum_probs=166.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.|++|.||+|+..  +..|++|+....... ..+.+.+|++++++++|+||+++++++.+.+..++||||++ |+
T Consensus         5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~   83 (284)
T cd07836           5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KD   83 (284)
T ss_pred             eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-cc
Confidence            567999999999999985  788999987654332 35677889999999999999999999999999999999997 69


Q ss_pred             HHHHhcCCC---CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          174 LADCLRNPR---NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       174 L~~~l~~~~---~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |.+++....   ...+..+..+                 |.+|+|+||+++++    ..++|+|||++......    ..
T Consensus        84 l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~----~~~~l~d~g~~~~~~~~----~~  155 (284)
T cd07836          84 LKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR----GELKLADFGLARAFGIP----VN  155 (284)
T ss_pred             HHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC----CcEEEeecchhhhhcCC----cc
Confidence            999887543   2333333222                 23456888888876    56999999999764321    11


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-ccchhh
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-VGGVRK  311 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  311 (381)
                      ......++..|++||++.+. .++.++|||||||++|+|++|++||.......        ............ ...+..
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED--------QLLKIFRIMGTPTESTWPG  227 (284)
T ss_pred             ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH--------HHHHHHHHhCCCChhhHHH
Confidence            22345678999999988654 56899999999999999999999996432210        011100000000 000000


Q ss_pred             hh-----cccc-------cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WV-----DRRL-------KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~-----~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +.     ....       .....+..+..+.+++.+||+.||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00     0000       00111234678899999999999999999999975

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=4.3e-30  Score=234.52  Aligned_cols=237  Identities=18%  Similarity=0.187  Sum_probs=162.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcC-CCCcceEEEEEEeC--CeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSH-HSSLIKLLGACVSG--NCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~--~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|...  ++.+++|+.+..... ......+|+.++.++. |+||+++++++.+.  +.+++||||++
T Consensus         4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~   83 (282)
T cd07831           4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD   83 (282)
T ss_pred             EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence            467899999999999884  788999886543222 2334567999999985 99999999999987  88999999996


Q ss_pred             CCCHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                       |+|.+++.... ...+..+..                 +|++|+|.||+++.     +.+||+|||+++.+...     
T Consensus        84 -~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-----~~~kl~dfg~~~~~~~~-----  152 (282)
T cd07831          84 -MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-----DILKLADFGSCRGIYSK-----  152 (282)
T ss_pred             -ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-----CCeEEEecccccccccC-----
Confidence             68888887643 334333322                 23356688888887     34999999999765321     


Q ss_pred             ccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......++..|+|||++.. +.++.++|||||||++|||++|..||......        ................+..
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~  224 (282)
T cd07831         153 PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--------DQIAKIHDVLGTPDAEVLK  224 (282)
T ss_pred             CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--------HHHHHHHHHcCCCCHHHHH
Confidence            11223568899999997654 55789999999999999999999999643211        1111111111000000000


Q ss_pred             hhccc------ccC-------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRR------LKD-------SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~------~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+...      ...       .....++..+.+||.+||+.||++||++.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         225 KFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             hhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            00000      000       001245688999999999999999999999975

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=7.4e-33  Score=233.72  Aligned_cols=247  Identities=17%  Similarity=0.214  Sum_probs=174.0

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEe--------CCeeeEE
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVS--------GNCGYLV  165 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~--------~~~~~lv  165 (381)
                      .++|+|.||.||+|+.+  ++.|++|++......  -.....+|+++|..|+|+|++.+++.|..        ...+|+|
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylV  102 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLV  102 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeee
Confidence            57899999999999885  677888876553332  24567889999999999999999998863        3458999


Q ss_pred             EeccCCCCHHHHhcCCC-CCC-----------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          166 YEHVSGANLADCLRNPR-NPS-----------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~-~~~-----------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |.+|+ .+|.-+|.+.. .+.                 .+.-...|+|+|++|+|++.+    +++||+|||+++.+...
T Consensus       103 f~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~d----gilklADFGlar~fs~~  177 (376)
T KOG0669|consen  103 FDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKD----GILKLADFGLARAFSTS  177 (376)
T ss_pred             HHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCC----ceEEeeccccccceecc
Confidence            99996 79999998753 222                 122235677899999999998    56999999999988665


Q ss_pred             CCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCc-------------ccccchh
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI-------------DGYRRVS  293 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~-------------~~~~~~~  293 (381)
                      ........++.+-|.+|++||.+.+. .|+++.|||..|||+.||+||.+.|....+...             +.++...
T Consensus       178 ~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d  257 (376)
T KOG0669|consen  178 KNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVD  257 (376)
T ss_pred             cccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcc
Confidence            55555556777889999999988764 689999999999999999999999875443221             1111111


Q ss_pred             HHHHHHHHHcC-CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          294 VVDKASEAVAG-GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       294 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........... -...-...+...++   |..-.++..+|+.++|..||.+|+.+.++++
T Consensus       258 ~lpL~~sie~ePl~~~~~rkv~n~~k---p~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  258 NLPLYQSIELEPLPKGQKRKVKNRLK---PYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             cchHHHhccCCCCCcchhhhhhhhcc---cccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            11111000000 00000111111111   1112357889999999999999999999864

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=8.1e-31  Score=245.82  Aligned_cols=241  Identities=17%  Similarity=0.195  Sum_probs=167.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~  166 (381)
                      ..+.||+|+||.||+|+..  ++.|++|......  ......+.+|+.+++.++|+||+++++++...     ...|+||
T Consensus         9 ~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~   88 (337)
T cd07858           9 PIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVY   88 (337)
T ss_pred             EEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEE
Confidence            4567899999999999974  7899999865432  22456678899999999999999999988654     3579999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+. ++|.+++..........+..+                 |++|+|.||+++.+    ..+||+|||+++.....  
T Consensus        89 e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~----~~~kL~Dfg~~~~~~~~--  161 (337)
T cd07858          89 ELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN----CDLKICDFGLARTTSEK--  161 (337)
T ss_pred             eCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC----CCEEECcCccccccCCC--
Confidence            9995 899999987665554444332                 23566899999876    56999999999764321  


Q ss_pred             CccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC----
Q 016850          230 NESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG----  304 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----  304 (381)
                        ........++..|+|||.+.. ..++.++|||||||++|+|++|++||......        ............    
T Consensus       162 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~  231 (337)
T cd07858         162 --GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--------HQLKLITELLGSPSEE  231 (337)
T ss_pred             --cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--------HHHHHHHHHhCCCChH
Confidence              122234568899999998765 46889999999999999999999999642110        000000000000    


Q ss_pred             -----Cccchhhhhcc---cccC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          305 -----GVGGVRKWVDR---RLKD---SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       305 -----~~~~~~~~~~~---~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                           .......+...   ....   ...+.+++++.+|+.+||+.||++||++.++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence                 00001111100   0000   0112456789999999999999999999999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.9e-32  Score=249.11  Aligned_cols=240  Identities=15%  Similarity=0.199  Sum_probs=189.5

Q ss_pred             cccccCCCceEEEEEECCce--EEEEEecc---cccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           98 KKFTSSSASASWRGTIRGKD--VIIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~--v~vk~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..||-|+||.|-++..+++.  +|+|.++.   ......+.+..|-.||..++.|.||++|-.|.+...+|++||-|-||
T Consensus       426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGG  505 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGG  505 (732)
T ss_pred             hhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCc
Confidence            46999999999999988766  55554433   33335677889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .|+..|.+++.+.......                 +.+||||+|.+|+..    +-+||.|||+|+.+.     .....
T Consensus       506 ElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~----Gy~KLVDFGFAKki~-----~g~KT  576 (732)
T KOG0614|consen  506 ELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNR----GYLKLVDFGFAKKIG-----SGRKT  576 (732)
T ss_pred             hhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccC----CceEEeehhhHHHhc-----cCCce
Confidence            9999999987765443222                 224677888888887    449999999999864     33455


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      -++||||.|.|||++.+...+.++|.|||||++|||++|.+||...+.-     ...+       .          ++..
T Consensus       577 wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-----ktYn-------~----------ILkG  634 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-----KTYN-------L----------ILKG  634 (732)
T ss_pred             eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-----HHHH-------H----------HHhh
Confidence            6799999999999999999999999999999999999999999743221     1111       1          1111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCC--hHHHHHHHHHHHHHhhhhhhhc
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD--MRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs--~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      --.-.+|..+.....+||++++..+|.+|..  ...|-+.=++.+.++-+|+.+-
T Consensus       635 id~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr  689 (732)
T KOG0614|consen  635 IDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLR  689 (732)
T ss_pred             hhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhh
Confidence            1123467788899999999999999999987  6666666778888888888654

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=1.8e-30  Score=243.35  Aligned_cols=243  Identities=15%  Similarity=0.147  Sum_probs=167.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc--------------HHHHHHHHHHHhhcCCCCcceEEEEEEeCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD--------------LEQLRERLSVICRSHHSSLIKLLGACVSGN  160 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~--------------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~  160 (381)
                      .+.||+|+||.||+|...  ++.||+|+........              ...+.+|++++++++|+||+++++++...+
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD   93 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence            356899999999999874  7889999865432221              124778999999999999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccc
Q 016850          161 CGYLVYEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ..++||||++ |+|.+++.............+                 |.+|+|+||+++.+    ..+||+|||+++.
T Consensus        94 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~----~~~kl~dfg~~~~  168 (335)
T PTZ00024         94 FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSK----GICKIADFGLARR  168 (335)
T ss_pred             cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCC----CCEEECCccceee
Confidence            9999999996 799999977655554433332                 33567999999876    5699999999976


Q ss_pred             cccCCC----------CccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          224 CGEVSG----------NESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       224 ~~~~~~----------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      ......          ..........+++.|+|||++.+. .++.++|||||||++|||++|++||......        
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--------  240 (335)
T PTZ00024        169 YGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI--------  240 (335)
T ss_pred             cccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------
Confidence            531000          011122334578899999988764 4689999999999999999999999643221        


Q ss_pred             hHHHHHHHHHcCCc-cchhhhh--------cccccC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          293 SVVDKASEAVAGGV-GGVRKWV--------DRRLKD---SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       293 ~~~~~~~~~~~~~~-~~~~~~~--------~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .............. ..+....        ......   ......+..+.+++.+||+.||++||+++|++.
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            11111111110000 0000000        000000   001223577899999999999999999999975

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=2.6e-30  Score=239.44  Aligned_cols=250  Identities=17%  Similarity=0.175  Sum_probs=169.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|...  ++.||+|+.......  ....+.+|+.++++++|+||+++++++.+.  +.+++||||+
T Consensus        11 ~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~   90 (309)
T cd07845          11 KLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYC   90 (309)
T ss_pred             EeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecC
Confidence            3467899999999999985  788999987654322  234567899999999999999999998764  5689999999


Q ss_pred             CCCCHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      + ++|.+++... ......++..+                 |++|+|+||++++.    ..+||+|||++.......   
T Consensus        91 ~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~----~~~kL~dfg~~~~~~~~~---  162 (309)
T cd07845          91 E-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDK----GCLKIADFGLARTYGLPA---  162 (309)
T ss_pred             C-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CCEEECccceeeecCCcc---
Confidence            5 6898888753 33333333322                 23566889999876    569999999998753211   


Q ss_pred             cccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch-
Q 016850          232 SGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV-  309 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  309 (381)
                       .......+++.|+|||++.+ ..++.++|||||||++|||++|++||......        ................. 
T Consensus       163 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--------~~~~~~~~~~~~~~~~~~  233 (309)
T cd07845         163 -KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--------EQLDLIIQLLGTPNESIW  233 (309)
T ss_pred             -CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhcCCCChhhc
Confidence             12233456889999998865 45789999999999999999999999643221        11111111000000000 


Q ss_pred             hh--------hhc-ccccCC----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCC
Q 016850          310 RK--------WVD-RRLKDS----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFP  371 (381)
Q Consensus       310 ~~--------~~~-~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~  371 (381)
                      ..        .+. +.....    .....++.+.++|.+||+.||++|||+.++++         +.|.....+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~---------h~~f~~~~~~  299 (309)
T cd07845         234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE---------SSYFKEKPLP  299 (309)
T ss_pred             hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc---------ChhhccCCCC
Confidence            00        000 000000    00124678899999999999999999999975         5666555555

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=4e-30  Score=233.24  Aligned_cols=217  Identities=15%  Similarity=0.141  Sum_probs=157.6

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      ||+|+||.||++...  +..+++|.........     .|+.+...+ +||||+++++++...+..|+||||+++|+|.+
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~   98 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD   98 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence            699999999999975  6677777754322111     123222222 79999999999999999999999999999999


Q ss_pred             HhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccC
Q 016850          177 CLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIE  239 (381)
Q Consensus       177 ~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~  239 (381)
                      ++.......+..+..++                 ++|+|+||+++..+   ..++|+|||++.....        .....
T Consensus        99 ~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~---~~~~l~dfg~~~~~~~--------~~~~~  167 (267)
T PHA03390         99 LLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK---DRIYLCDYGLCKIIGT--------PSCYD  167 (267)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC---CeEEEecCccceecCC--------CccCC
Confidence            99877655555544433                 34568888888763   2699999999876432        12346


Q ss_pred             CCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccC
Q 016850          240 GTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKD  319 (381)
Q Consensus       240 gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (381)
                      |+..|+|||++.+..++.++||||||+++|||++|+.||........      ....+. .           ..  ....
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~------~~~~~~-~-----------~~--~~~~  227 (267)
T PHA03390        168 GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL------DLESLL-K-----------RQ--QKKL  227 (267)
T ss_pred             CCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh------hHHHHH-H-----------hh--cccC
Confidence            89999999999988899999999999999999999999973322110      011100 0           00  0111


Q ss_pred             CCCHHHHHHHHHHHHHhhccCCCCCCC-hHHHHH
Q 016850          320 SYPVEVAEKMVLLGLQCVDEDPGKRPD-MRQVTG  352 (381)
Q Consensus       320 ~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~  352 (381)
                      ..+...++.+.+++.+||+.||.+||+ ++++++
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        228 PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            223357788999999999999999996 588864

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=2.7e-30  Score=237.55  Aligned_cols=240  Identities=14%  Similarity=0.152  Sum_probs=162.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCe-----eeEEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRS-HHSSLIKLLGACVSGNC-----GYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~-----~~lv~  166 (381)
                      .+.||+|+||.||+|.+.  ++.|++|+.......  ....+.+|+.+++.+ +||||+++++++...+.     .|+||
T Consensus         6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~   85 (295)
T cd07837           6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF   85 (295)
T ss_pred             eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence            467899999999999984  778999886554322  346788899999999 56999999999887665     89999


Q ss_pred             eccCCCCHHHHhcCCC-----CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccccccccc
Q 016850          167 EHVSGANLADCLRNPR-----NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~-----~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      ||++ ++|.+++....     ...+..+..+                 |++|+|+||+++..+   ..+||+|||+++.+
T Consensus        86 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~---~~~kl~dfg~~~~~  161 (295)
T cd07837          86 EYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQK---GLLKIADLGLGRAF  161 (295)
T ss_pred             eccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCC---CeEEEeecccceec
Confidence            9997 58999886532     2233333322                 235668999998732   66999999998764


Q ss_pred             ccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ...    ........+++.|+|||++.+ ..++.++||||||+++|+|++|..||......        .........+.
T Consensus       162 ~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--------~~~~~~~~~~~  229 (295)
T cd07837         162 SIP----VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL--------QQLLHIFKLLG  229 (295)
T ss_pred             CCC----ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHHhC
Confidence            321    112223457889999998865 45789999999999999999999999642210        00000000000


Q ss_pred             CCc-------cchhhhh-ccccc----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGV-------GGVRKWV-DRRLK----DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~-------~~~~~~~-~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...       ..+.... .+...    ....+.++..+.++|.+||..||.+||++.|++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             CCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000       0000000 00000    0011235678999999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=4e-30  Score=238.12  Aligned_cols=221  Identities=18%  Similarity=0.214  Sum_probs=162.0

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      +.||+|+||.||+|+..  +..+++|.......   ....++.+|+++++.++|+||+++++++.+.+..++||||+. |
T Consensus        21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~   99 (308)
T cd06634          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G   99 (308)
T ss_pred             HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-C
Confidence            56999999999999984  67888887653222   234568889999999999999999999999999999999996 7


Q ss_pred             CHHHHhcCCC-CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..                 .|.+|+|.||+++.+    +.+||+|||++.....        
T Consensus       100 ~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~----~~~kl~dfg~~~~~~~--------  167 (308)
T cd06634         100 SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP----GLVKLGDFGSASIMAP--------  167 (308)
T ss_pred             CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC----CcEEECCcccceeecC--------
Confidence            8888775432 233332222                 223566999999876    5699999999876421        


Q ss_pred             ccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          235 VNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .....|++.|+|||++.   ...++.++|||||||++|+|++|+.||.....           .......          
T Consensus       168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~~----------  226 (308)
T cd06634         168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHI----------  226 (308)
T ss_pred             cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-----------HHHHHHH----------
Confidence            12356889999999874   35678899999999999999999999853211           0000000          


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                       ............++..+.+||.+||+.+|.+||++.++++.
T Consensus       227 -~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         227 -AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             -hhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence             00111111123466789999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=2.7e-30  Score=236.22  Aligned_cols=240  Identities=16%  Similarity=0.209  Sum_probs=167.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|...  ++.+++|+.....  ......+.+|++++++++|+||+++++++.+.  +..++||||++
T Consensus         4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~   83 (287)
T cd07840           4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD   83 (287)
T ss_pred             eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence            467899999999999985  5889999876653  22356788999999999999999999999988  88999999996


Q ss_pred             CCCHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                       ++|.+++... .......+..+                 |.+|+|.||+++++    +.+||+|||++.......   .
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~----~~~~l~d~g~~~~~~~~~---~  155 (287)
T cd07840          84 -HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINND----GVLKLADFGLARPYTKRN---S  155 (287)
T ss_pred             -ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCC----CCEEEccccceeeccCCC---c
Confidence             6999998765 33443333322                 23566999999886    569999999998753311   1


Q ss_pred             ccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-ccchh
Q 016850          233 GKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-VGGVR  310 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  310 (381)
                      .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......        ............. ...+.
T Consensus       156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--------EQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCchhhcc
Confidence            12334567889999997764 45789999999999999999999998632211        0111111100000 00000


Q ss_pred             hh--------------hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KW--------------VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~--------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+              ....+...+...+++.+.+++.+||..||.+||++.++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            00              0000000011113678999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=7e-32  Score=240.23  Aligned_cols=262  Identities=16%  Similarity=0.167  Sum_probs=177.5

Q ss_pred             ceeeHHHHHHHhcCCcccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-C-C----CcceE
Q 016850           81 HIYHLSEICAATNNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-H-S----SLIKL  152 (381)
Q Consensus        81 ~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h-~----nIv~l  152 (381)
                      -.|...|.. ...++....+|+|.||.|..+.+.  +..||+|+++..... .+..+-|+++|.+|. + |    -+|++
T Consensus        79 ~v~~~gD~l-~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m  156 (415)
T KOG0671|consen   79 YVYQVGDIL-TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQM  156 (415)
T ss_pred             EEEEecccc-ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence            355555554 223345678999999999999875  567888876443332 455667999999993 2 3    38999


Q ss_pred             EEEEEeCCeeeEEEeccCCCCHHHHhcCCCCCC--ccchH-----------------HHHHHhhhcceeecccCC-----
Q 016850          153 LGACVSGNCGYLVYEHVSGANLADCLRNPRNPS--FTVLS-----------------TWLSRMQSSSIIVSEENA-----  208 (381)
Q Consensus       153 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~-----------------~~~~~l~~~Nill~~~~~-----  208 (381)
                      .+||+-.++.|||+|.+ |-++.++|.++...+  ..++.                 ..|.||||+|||+-+...     
T Consensus       157 ~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~  235 (415)
T KOG0671|consen  157 RDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYN  235 (415)
T ss_pred             ehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEec
Confidence            99999999999999999 679999999876443  22222                 223477899999865421     


Q ss_pred             -----------CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcc
Q 016850          209 -----------GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEV  277 (381)
Q Consensus       209 -----------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~p  277 (381)
                                 .+..|+|+|||.|...       .......+.|..|+|||++.+..++..+||||+||||+|+.+|...
T Consensus       236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~-------~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L  308 (415)
T KOG0671|consen  236 PKKKVCFIRPLKSTAIKVIDFGSATFD-------HEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL  308 (415)
T ss_pred             cCCccceeccCCCcceEEEecCCccee-------ccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence                       3567999999999763       2233678899999999999999999999999999999999999999


Q ss_pred             ccccccCC--------cccccchhHHHH-HHHHHcCCccchh--------hhhcccccC-----CCCHHHHHHHHHHHHH
Q 016850          278 LKFVFDEG--------IDGYRRVSVVDK-ASEAVAGGVGGVR--------KWVDRRLKD-----SYPVEVAEKMVLLGLQ  335 (381)
Q Consensus       278 f~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~-----~~~~~~~~~l~~li~~  335 (381)
                      |+...+..        .++.+....... ..+....+.-.+.        +.+-...++     .........|.||+++
T Consensus       309 FqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~  388 (415)
T KOG0671|consen  309 FQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR  388 (415)
T ss_pred             cccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence            98655321        011111111111 0011100000000        000000000     0123445679999999


Q ss_pred             hhccCCCCCCChHHHHH
Q 016850          336 CVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       336 cl~~dP~~RPs~~evl~  352 (381)
                      ||..||.+|+|+.|++.
T Consensus       389 mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  389 MLEFDPARRITLREALS  405 (415)
T ss_pred             HHccCccccccHHHHhc
Confidence            99999999999999975

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=1.3e-30  Score=237.40  Aligned_cols=229  Identities=19%  Similarity=0.278  Sum_probs=173.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|...  ++.+++|+.....   ....+.+.+|++++++++ ||||+++++++.+.+..++||||+
T Consensus         5 ~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   84 (280)
T cd05581           5 FGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYA   84 (280)
T ss_pred             EeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCC
Confidence            3567999999999999984  7889998865422   223467889999999998 999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc-
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE-  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~-  231 (381)
                      ++++|.+++..........+..+.                 .+|+|+||+++.+    +.++|+|||++.......... 
T Consensus        85 ~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~----~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          85 PNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKD----MHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC----CCEEecCCccccccCCcccccc
Confidence            999999999887665555444433                 2456889999876    559999999998654322110 


Q ss_pred             ---------------cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHH
Q 016850          232 ---------------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       232 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                                     ........|+..|+|||++.+..++.++||||||++++++++|+.||.....        .....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~  232 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--------YLTFQ  232 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHH
Confidence                           1222345688999999998888889999999999999999999999964321        00001


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh----HHHHH
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM----RQVTG  352 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~  352 (381)
                      .              ..  ......+..+++.+.+++.+||+.||.+||++    .++++
T Consensus       233 ~--------------~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         233 K--------------IL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             H--------------HH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            0              00  11122344557789999999999999999999    66654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=2.3e-30  Score=233.65  Aligned_cols=224  Identities=15%  Similarity=0.221  Sum_probs=162.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc-----ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR-----RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||++.+.  +..+++|..+..     ......++.+|+.++++++||||+++++++.+....++||||+
T Consensus         5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (260)
T cd08222           5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYC   84 (260)
T ss_pred             eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeC
Confidence            467999999999999885  334444443221     1123446778999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcC----CCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          170 SGANLADCLRN----PRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       170 ~~gsL~~~l~~----~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ++++|.+++..    .....+..+..+                 |.+|+|+||++++.     .+||+|||++.....  
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~-----~~~l~d~g~~~~~~~--  157 (260)
T cd08222          85 EGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN-----LLKIGDFGVSRLLMG--  157 (260)
T ss_pred             CCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC-----CEeecccCceeecCC--
Confidence            99999998864    222333322222                 23456888888653     399999999876532  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                        .........|++.|+|||.+.+..++.++||||||+++|+|++|..||....           .........      
T Consensus       158 --~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----------~~~~~~~~~------  218 (260)
T cd08222         158 --SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----------FLSVVLRIV------  218 (260)
T ss_pred             --CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HHHHHHHHH------
Confidence              1112234568899999999888888999999999999999999999985311           111111111      


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .......+..++..+.++|.+||..||++||++.++++
T Consensus       219 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         219 ------EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             ------cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence                  11122234566788999999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=3.7e-30  Score=236.75  Aligned_cols=238  Identities=11%  Similarity=0.070  Sum_probs=155.5

Q ss_pred             cccccccCCCceEEEEEECCc-----eEEEEEeccccccc-H----------HHHHHHHHHHhhcCCCCcceEEEEEEeC
Q 016850           96 LAKKFTSSSASASWRGTIRGK-----DVIIFQRKLRRSLD-L----------EQLRERLSVICRSHHSSLIKLLGACVSG  159 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~-----~v~vk~~~~~~~~~-~----------~~~~~E~~il~~l~h~nIv~l~~~~~~~  159 (381)
                      ..+.||+|+||.||+|.+.+.     .+++|+........ .          .....+...+..+.|+||+++++++...
T Consensus        16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~   95 (294)
T PHA02882         16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFK   95 (294)
T ss_pred             EeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEe
Confidence            356799999999999998543     45555433322211 0          1122333455667899999999976654


Q ss_pred             C----eeeEEEeccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccc
Q 016850          160 N----CGYLVYEHVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       160 ~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                      .    ..+++||++ ..++.+.+......+...+.                 .+|+||||+|||++..    ..++|+||
T Consensus        96 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~----~~~~l~DF  170 (294)
T PHA02882         96 RCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGN----NRGYIIDY  170 (294)
T ss_pred             cCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CcEEEEEc
Confidence            3    347888988 45777776554322222211                 2345778999999876    56999999


Q ss_pred             ccccccccCCCCc---cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHH
Q 016850          219 GTAELCGEVSGNE---SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       219 G~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |+++.+.......   ........||+.|+|||++.+..++.++|||||||++|||++|+.||.........  ......
T Consensus       171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~--~~~~~~  248 (294)
T PHA02882        171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL--IHAAKC  248 (294)
T ss_pred             CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH--HHHhHH
Confidence            9998753211111   11223356999999999999889999999999999999999999999754221100  000000


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      +....           +.....   ....+++.+.+++..||..+|++||++.++++.|
T Consensus       249 ~~~~~-----------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        249 DFIKR-----------LHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHH-----------hhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            10000           000111   1123457899999999999999999999998876

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=8.7e-31  Score=244.61  Aligned_cols=245  Identities=18%  Similarity=0.214  Sum_probs=167.3

Q ss_pred             HHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCe
Q 016850           88 ICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVS-GNC  161 (381)
Q Consensus        88 ~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~  161 (381)
                      +..++++| ..+.||.|+||.||+|...  ++.|++|+.....  ....+.+.+|++++++++|||||++++++.. ...
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   84 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED   84 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence            34455666 4577899999999999875  7789998764322  2245678899999999999999999999875 567


Q ss_pred             eeEEEeccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          162 GYLVYEHVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       162 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      .++||||+ +++|.+++..... ....+.                 .+|++|+|.||++++.    +.+||+|||++...
T Consensus        85 ~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~----~~~~l~dfg~~~~~  158 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTSRPL-EKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINEN----CDLKICDFGLARIQ  158 (328)
T ss_pred             EEEEeehh-ccCHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCC----CCEEeCcccccccc
Confidence            89999999 6799998875432 222111                 2234566899999876    56999999998753


Q ss_pred             ccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..       ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......        ...........
T Consensus       159 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--------~~~~~~~~~~~  223 (328)
T cd07856         159 DP-------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--------NQFSIITDLLG  223 (328)
T ss_pred             CC-------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhC
Confidence            21       1233567889999998765 56899999999999999999999999642210        00000000000


Q ss_pred             CCcc---------chhhhhcc-cccCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          304 GGVG---------GVRKWVDR-RLKDSYP-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       304 ~~~~---------~~~~~~~~-~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      ...+         ...+.+.. ......+     +.+++.+.++|.+||+.+|++||++.+++..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         224 TPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0000         00000000 0001111     1245789999999999999999999998654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.4e-30  Score=231.86  Aligned_cols=218  Identities=19%  Similarity=0.227  Sum_probs=166.6

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ||+|+||.||++...  ++.+++|........   ..+.+.+|++++++++||||+++++.+.+++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999985  788888876543322   456789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++..........+..++                 .+|+|.||+++..    ..++|+|||++.......    .....
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~----~~~~l~d~~~~~~~~~~~----~~~~~  152 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD----GHIKLTDFGLAKELSSEG----SRTNT  152 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC----CcEEEeecCcceecccCC----CcccC
Confidence            9999876555544433332                 3456888888876    569999999987643211    22344


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRL  317 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (381)
                      ..++..|++||.+.+..++.++|+||||+++|++++|+.||.....        .....   . +          ..  .
T Consensus       153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~---~-~----------~~--~  208 (250)
T cd05123         153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYE---K-I----------LK--D  208 (250)
T ss_pred             CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHH---H-H----------hc--C
Confidence            6689999999999888889999999999999999999999953211        00011   0 0          11  1


Q ss_pred             cCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          318 KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       318 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                      ....+...+..+.+++.+||..||++||++.+
T Consensus       209 ~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         209 PLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            12233444678999999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=5.8e-31  Score=255.44  Aligned_cols=226  Identities=18%  Similarity=0.283  Sum_probs=172.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEE-----eCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACV-----SGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-----~~~~~~lv~e~  168 (381)
                      .+.+|.|.||.||+++..  ++.+|+|+.....+ ..+++..|.++|+.+ .|||++.+||+|.     .++.+||||||
T Consensus        24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEf  102 (953)
T KOG0587|consen   24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEF  102 (953)
T ss_pred             EEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeec
Confidence            567899999999998874  78888887654433 346788899999988 7999999999986     47789999999


Q ss_pred             cCCCCHHHHhcCCCC--CCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          169 VSGANLADCLRNPRN--PSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~--~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |.+|+..|+++.-..  +.+..+.                 .+|+|++-.|||++.+    +.|||+|||++..+..   
T Consensus       103 C~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e----~~VKLvDFGvSaQlds---  175 (953)
T KOG0587|consen  103 CGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTEN----AEVKLVDFGVSAQLDS---  175 (953)
T ss_pred             cCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEecc----CcEEEeeeeeeeeeec---
Confidence            999999999987442  2222221                 2334667888888887    5599999999987643   


Q ss_pred             CccccccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          230 NESGKVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                       ......+.+||+.|||||++..     ..|+..+|+|||||+..||.-|.+|+-..-.           ......+   
T Consensus       176 -T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP-----------mraLF~I---  240 (953)
T KOG0587|consen  176 -TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP-----------MRALFLI---  240 (953)
T ss_pred             -ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch-----------hhhhccC---
Confidence             4455678899999999998853     3578899999999999999999999853221           0000000   


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             ...+..+..-|..++.++.++|..||.+|-.+||++.++++
T Consensus       241 -------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  241 -------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             -------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence                   01222223346789999999999999999999999998874

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=6.2e-30  Score=235.95  Aligned_cols=240  Identities=16%  Similarity=0.191  Sum_probs=163.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC----------e
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGN----------C  161 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----------~  161 (381)
                      ..+.||+|+||.||+|.+.  ++.|++|+......  .....+.+|++++++++||||+++++++.+..          .
T Consensus        11 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   90 (302)
T cd07864          11 IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGA   90 (302)
T ss_pred             eeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCc
Confidence            3567899999999999985  77898988755432  23456788999999999999999999987654          7


Q ss_pred             eeEEEeccCCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccc
Q 016850          162 GYLVYEHVSGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       162 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      +++||||++ ++|.+++.... ......+..+                 |.+|+|.||++++.    +.+||+|||++..
T Consensus        91 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~----~~~kl~dfg~~~~  165 (302)
T cd07864          91 FYLVFEYMD-HDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNK----GQIKLADFGLARL  165 (302)
T ss_pred             EEEEEcccC-ccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CcEEeCccccccc
Confidence            899999996 58888877542 3333333222                 23566888888876    5699999999986


Q ss_pred             cccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      .....   ........++..|+|||.+.+ ..++.++|||||||++|||++|++||.....        ...........
T Consensus       166 ~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~--------~~~~~~~~~~~  234 (302)
T cd07864         166 YNSEE---SRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE--------LAQLELISRLC  234 (302)
T ss_pred             ccCCc---ccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHh
Confidence            53211   112223456889999998765 3578999999999999999999999963221        11111111111


Q ss_pred             cCCc-cchhhhhc--------------ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGV-GGVRKWVD--------------RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .... ..+..+..              ...... ...++..+.+++.+||+.||.+||++.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             CCCChhhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1000 00000000              000000 1124678999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=9e-31  Score=233.49  Aligned_cols=246  Identities=16%  Similarity=0.235  Sum_probs=184.6

Q ss_pred             HHHHHHhcCCccc-ccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEE
Q 016850           86 SEICAATNNFLAK-KFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGAC  156 (381)
Q Consensus        86 ~~~~~~~~~f~~~-~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~  156 (381)
                      .++......|... .+-+|.||.||+|.++.       +.|.+|..+..... ....+..|--.|..+.|||+..+.+++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            3444333444333 35699999999997742       34555554443332 456778888888999999999999987


Q ss_pred             Ee-CCeeeEEEeccCCCCHHHHhcCCCCC------Ccc---------ch----------HHHHHHhhhcceeecccCCCc
Q 016850          157 VS-GNCGYLVYEHVSGANLADCLRNPRNP------SFT---------VL----------STWLSRMQSSSIIVSEENAGS  210 (381)
Q Consensus       157 ~~-~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~---------~~----------~~~~~~l~~~Nill~~~~~~~  210 (381)
                      .. ....++++.++.-|+|..+|...+..      ...         |+          ..+|.||..+|+++++.    
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~----  432 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQ----  432 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhh----
Confidence            64 56688999999999999999832211      111         11          12345677999999987    


Q ss_pred             cceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccc
Q 016850          211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGY  289 (381)
Q Consensus       211 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~  289 (381)
                      ..+||+|=.+++.+-+  .++.....+...+..||+||.+.+..|+.++|+|||||++|||+| |+.|+...+.      
T Consensus       433 LqVkltDsaLSRDLFP--~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP------  504 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFP--GDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP------  504 (563)
T ss_pred             eeEEeccchhccccCc--ccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH------
Confidence            8899999999987632  334444445556889999999999999999999999999999998 8888754322      


Q ss_pred             cchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          290 RRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                                       .....++..+.+...|.+|++++..+|..||..+|++||++++++..|.+++.+
T Consensus       505 -----------------fEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  505 -----------------FEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             -----------------HHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence                             123344555566667889999999999999999999999999999999999876

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=7e-30  Score=233.12  Aligned_cols=239  Identities=19%  Similarity=0.213  Sum_probs=167.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|++|.||+|...  ++.+++|........  ....+.+|++++++++|+||+++++++.+++..++||||++ +
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~   82 (283)
T cd05118           4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-T   82 (283)
T ss_pred             ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-C
Confidence            457999999999999984  778888876544322  45678899999999999999999999999999999999996 5


Q ss_pred             CHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++... .......+..+                 |.+|+|.||+++.+    ..++|+|||.+.......    ..
T Consensus        83 ~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~----~~~~l~df~~~~~~~~~~----~~  154 (283)
T cd05118          83 DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE----GVLKLADFGLARSFGSPV----RP  154 (283)
T ss_pred             CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC----CcEEEeeeeeeEecCCCc----cc
Confidence            998888764 23333332222                 23556888888875    569999999997754321    12


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cchhhh
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGVRKW  312 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  312 (381)
                      .....++..|+|||.+.+. .++.++||||||+++|+|++|+.||......        .............. ..+...
T Consensus       155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd05118         155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI--------DQLFKIFRTLGTPDPEVWPKF  226 (283)
T ss_pred             ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHcCCCchHhcccc
Confidence            2335688899999998776 7899999999999999999999998643211        00000000000000 000000


Q ss_pred             hc------ccc-------cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VD------RRL-------KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~------~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..      ...       .......++.++.++|.+||+.||.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            00      000       00112346788999999999999999999999975

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=3.5e-30  Score=235.27  Aligned_cols=245  Identities=18%  Similarity=0.187  Sum_probs=164.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|+..  ++.|++|+....... ......+|+..+++++ |+||+++++++.+++..++||||+ +|
T Consensus         4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~   82 (283)
T cd07830           4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG   82 (283)
T ss_pred             heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence            467999999999999985  677888876543322 3344567999999998 999999999999999999999999 78


Q ss_pred             CHHHHhcCCC--CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNPR--NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~~--~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++....  .....++..                 .|.+|+|.||++++.    ..++|+|||++.....     ..
T Consensus        83 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~----~~~~l~d~~~~~~~~~-----~~  153 (283)
T cd07830          83 NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP----EVVKIADFGLAREIRS-----RP  153 (283)
T ss_pred             CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC----CCEEEeecccceeccC-----CC
Confidence            9999987754  333333222                 233566999999886    5699999999976422     11


Q ss_pred             cccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCccc-----ccchhHHHHHHHH-HcCCc
Q 016850          234 KVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG-----YRRVSVVDKASEA-VAGGV  306 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~  306 (381)
                      ......|+..|+|||++.+ ..++.++||||||++++||++|++||..........     ........+.... .....
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (283)
T cd07830         154 PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL  233 (283)
T ss_pred             CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence            2234568899999998754 457899999999999999999999996432210000     0000000000000 00000


Q ss_pred             -cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 -GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..+.......... .....+..+.+++.+||+.||++||++.|++.
T Consensus       234 ~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         234 GFRFPQFAPTSLHQ-LIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             cccccccccccHHH-HcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             0000000000000 01112567999999999999999999999865

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.4e-30  Score=242.07  Aligned_cols=238  Identities=17%  Similarity=0.202  Sum_probs=161.0

Q ss_pred             cCC-cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------Ce
Q 016850           93 NNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NC  161 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~  161 (381)
                      +.| ....||+|+||.||+|...  ++.||+|+.....  ......+.+|++++++++||||+++++++...      ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            344 4567899999999999874  7889999865432  22345688999999999999999999998754      34


Q ss_pred             eeEEEeccCCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          162 GYLVYEHVSGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       162 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      +++||||+. ++|..++..  ......+.                 .+|++|+|+||+++.+    +.+||+|||+++..
T Consensus        95 ~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~----~~~kL~dfg~~~~~  167 (342)
T cd07879          95 FYLVMPYMQ-TDLQKIMGH--PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED----CELKILDFGLARHA  167 (342)
T ss_pred             EEEEecccc-cCHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEEeeCCCCcCC
Confidence            699999995 588777542  22222211                 2344677999999886    56999999998753


Q ss_pred             ccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..       ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.....        ............
T Consensus       168 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--------~~~~~~~~~~~~  232 (342)
T cd07879         168 DA-------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVTG  232 (342)
T ss_pred             CC-------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhcC
Confidence            21       1234567899999998876 4688999999999999999999999964211        000100000000


Q ss_pred             CCccch---------hhhhc--ccc-cCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGV---------RKWVD--RRL-KDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~---------~~~~~--~~~-~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+         ...+.  +.. ....   .+..++.+.+|+.+||+.||.+||++.+++.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~  296 (342)
T cd07879         233 VPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE  296 (342)
T ss_pred             CCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            000000         00000  000 0000   1124567899999999999999999999974

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=5.4e-30  Score=239.49  Aligned_cols=242  Identities=19%  Similarity=0.224  Sum_probs=171.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC-----eeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGN-----CGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~~lv~e  167 (381)
                      .+.||.|+||.||+|+..  ++.+++|+.....  ....+.+.+|+.+++.++|+||+++++++...+     .+|+|||
T Consensus         5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e   84 (330)
T cd07834           5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE   84 (330)
T ss_pred             eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence            567999999999999985  6889998875543  234577999999999999999999999988765     7899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |++ ++|.+++.......+..+..+                 |.+|+|.||+++.+    +.++|+|||++.........
T Consensus        85 ~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~----~~~~L~dfg~~~~~~~~~~~  159 (330)
T cd07834          85 LME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN----CDLKICDFGLARGVDPDEDE  159 (330)
T ss_pred             chh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CCEEEcccCceEeecccccc
Confidence            996 689999987665554443332                 23566999999887    56999999999875432110


Q ss_pred             ccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc------
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA------  303 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------  303 (381)
                       ........++..|+|||++.+. .++.++||||||+++|+|++|++||.......        ..........      
T Consensus       160 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--------~~~~i~~~~~~~~~~~  230 (330)
T cd07834         160 -KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--------QLNLIVEVLGTPSEED  230 (330)
T ss_pred             -cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--------HHHHHHHhcCCCChhH
Confidence             1123445689999999999877 78999999999999999999999996432210        0000000000      


Q ss_pred             ---CCccchhhhhcc---ccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 ---GGVGGVRKWVDR---RLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ---~~~~~~~~~~~~---~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .........+..   ...   ....+..+..+.+++.+||+.||.+||++.++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence               000001111110   000   0011235678999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=1.4e-29  Score=231.65  Aligned_cols=238  Identities=17%  Similarity=0.202  Sum_probs=164.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhc---CCCCcceEEEEEEeCCe-----eeE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRS---HHSSLIKLLGACVSGNC-----GYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~-----~~l  164 (381)
                      .+.||+|+||.||+|.+.  ++.+++|+.......  ....+.+|+.+++++   .||||+++++++.+.+.     .++
T Consensus         4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l   83 (287)
T cd07838           4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL   83 (287)
T ss_pred             EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence            457899999999999985  788999987654332  234567788887776   59999999999988776     999


Q ss_pred             EEeccCCCCHHHHhcCCCC--CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          165 VYEHVSGANLADCLRNPRN--PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~--~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      +|||++ ++|.+++.....  .++..+..+                 |.+|+|.||+++.+    ..+||+|||++....
T Consensus        84 ~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~----~~~~l~dfg~~~~~~  158 (287)
T cd07838          84 VFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD----GQVKIADFGLARIYS  158 (287)
T ss_pred             Eehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccC----CCEEEeccCcceecc
Confidence            999996 689998876432  343333222                 23456888888887    569999999997753


Q ss_pred             cCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC-
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG-  304 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-  304 (381)
                      ..     .......++..|+|||++.+..++.++|||||||++|||++|++||......        ............ 
T Consensus       159 ~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~  225 (287)
T cd07838         159 FE-----MALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--------DQLDKIFDVIGLP  225 (287)
T ss_pred             CC-----cccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--------HHHHHHHHHcCCC
Confidence            21     1122345789999999999888999999999999999999999998642211        011111110000 


Q ss_pred             Cccch-------hhhhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGV-------RKWVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~-------~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....+       ...+.....   .......++.+.+++.+||+.||.+||++.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         226 SEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             ChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            00000       000000000   1112345678899999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=8.9e-30  Score=234.39  Aligned_cols=227  Identities=18%  Similarity=0.251  Sum_probs=160.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|.++  ++.|++|........ ....+.+|+.++.++ .||||+++++++.+....|+||||++ +
T Consensus        20 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~   98 (296)
T cd06618          20 LGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-T   98 (296)
T ss_pred             eeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-c
Confidence            567999999999999997  788999987543322 345677788877777 49999999999999999999999994 6


Q ss_pred             CHHHHhcCC-CCCCccch------------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNP-RNPSFTVL------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++... ...+....                  ...|++|+|.||+++++    ..+||+|||++..+..     ..
T Consensus        99 ~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~----~~~kL~dfg~~~~~~~-----~~  169 (296)
T cd06618          99 CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDAS----GNVKLCDFGISGRLVD-----SK  169 (296)
T ss_pred             CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCC----CCEEECccccchhccC-----CC
Confidence            777776542 22222221                  12334566888888765    5699999999876422     11


Q ss_pred             cccccCCCccccchhhhcCCC----CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          234 KVNKIEGTRGYMAPEFQASGV----VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~----~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      ......++..|+|||.+.+..    ++.++||||||+++|+|++|+.||.....          ..+..........   
T Consensus       170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~~~~~~~~---  236 (296)
T cd06618         170 AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT----------EFEVLTKILQEEP---  236 (296)
T ss_pred             cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh----------HHHHHHHHhcCCC---
Confidence            122345788999999887543    78899999999999999999999863211          0111111111100   


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                           +...  ....++.++.+|+.+||..||.+||++.++++.
T Consensus       237 -----~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         237 -----PSLP--PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             -----CCCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                 0000  111345679999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=8.8e-30  Score=238.82  Aligned_cols=248  Identities=17%  Similarity=0.207  Sum_probs=164.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc--ccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe--CCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR--RSLDLEQLRERLSVICRS-HHSSLIKLLGACVS--GNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~--~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~--~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+.  ++.+++|+....  .......+.+|+.+++++ +||||+++++++..  ...+++||||+
T Consensus        12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~   91 (337)
T cd07852          12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM   91 (337)
T ss_pred             hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence            467999999999999984  678888876432  223455678899999999 99999999999865  34689999999


Q ss_pred             CCCCHHHHhcCCCCCCccchH-------H----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC-c
Q 016850          170 SGANLADCLRNPRNPSFTVLS-------T----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN-E  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~-------~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~-~  231 (381)
                      + ++|.+++... ........       .          .|++|+|.||+++.+    +.+||+|||++..+...... .
T Consensus        92 ~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~----~~~kl~d~g~~~~~~~~~~~~~  165 (337)
T cd07852          92 E-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSD----CRVKLADFGLARSLSELEENPE  165 (337)
T ss_pred             c-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC----CcEEEeeccchhcccccccccc
Confidence            6 6999998765 32322211       1          234567899999887    66999999999865321111 0


Q ss_pred             cccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcc-------cccchhHHHHHHHHHc
Q 016850          232 SGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID-------GYRRVSVVDKASEAVA  303 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~-------~~~~~~~~~~~~~~~~  303 (381)
                      ........|+..|+|||++.+ ..++.++||||||+++|+|++|+.||.........       ............... 
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  244 (337)
T cd07852         166 NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPF-  244 (337)
T ss_pred             CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhh-
Confidence            112334568999999998754 45789999999999999999999999642211000       000000000000000 


Q ss_pred             CCccchhhhhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          304 GGVGGVRKWVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                        ...+...+.....   ......++..+.++|.+||+.||.+|||+.++++.
T Consensus       245 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         245 --AATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             --HHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence              0000000000000   00111246789999999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=3.3e-30  Score=242.41  Aligned_cols=249  Identities=18%  Similarity=0.159  Sum_probs=168.4

Q ss_pred             eHHHHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEe
Q 016850           84 HLSEICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVS  158 (381)
Q Consensus        84 ~~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~  158 (381)
                      ...++...+++| ..+.||+|+||.||+|...  ++.||+|+.......  ..+.+.+|+.++++++||||+++++++..
T Consensus         8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~   87 (345)
T cd07877           8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP   87 (345)
T ss_pred             HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence            345556666777 4567899999999999874  788999886543222  34668889999999999999999998864


Q ss_pred             C------CeeeEEEeccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEE
Q 016850          159 G------NCGYLVYEHVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       159 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl  215 (381)
                      .      ...|++++++ +++|.+++.... ..+..+..                 .|++|+|.||+++++    +.+||
T Consensus        88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~----~~~kl  161 (345)
T cd07877          88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKI  161 (345)
T ss_pred             cccccccccEEEEehhc-ccCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCC----CCEEE
Confidence            3      3478899988 789998886543 33222222                 233566899999876    56999


Q ss_pred             cccccccccccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhH
Q 016850          216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~  294 (381)
                      +|||+++....       ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||......        ..
T Consensus       162 ~dfg~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~--------~~  226 (345)
T cd07877         162 LDFGLARHTDD-------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--------DQ  226 (345)
T ss_pred             ecccccccccc-------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HH
Confidence            99999876321       1234568999999998766 46789999999999999999999999642211        00


Q ss_pred             HHHHHHHHcCCccc------------hhhhhcccccCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          295 VDKASEAVAGGVGG------------VRKWVDRRLKDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       295 ~~~~~~~~~~~~~~------------~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      ..............            +...........+   ....++.+.++|.+||+.||.+||++.++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         227 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            00000000000000            0000000000000   01235678999999999999999999998753

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-31  Score=237.31  Aligned_cols=239  Identities=19%  Similarity=0.230  Sum_probs=179.3

Q ss_pred             ccccccCCCceEEEEEECC--ceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIRG--KDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~--~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ...||+|+||+|.+|..+|  ..+|||+++...   +.+.+--+.|-++|... +-|.+|+++..|...+.+|+||||+.
T Consensus       354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn  433 (683)
T KOG0696|consen  354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN  433 (683)
T ss_pred             EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence            5678999999999998875  467888754432   22445556677888766 67899999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ||+|--+|++-+.+.+..+..                 +.++||..||+|+.+    +++||+|||+.+.-    .-...
T Consensus       434 GGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~e----GHiKi~DFGmcKEn----i~~~~  505 (683)
T KOG0696|consen  434 GGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSE----GHIKIADFGMCKEN----IFDGV  505 (683)
T ss_pred             CchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccC----CceEeeeccccccc----ccCCc
Confidence            999999998876655444332                 224778999999998    67999999998752    22334


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ...+++|||.|+|||++....|+.++|.|||||+||||+.|++||+..+++        .+...              +.
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~--------elF~a--------------I~  563 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQA--------------IM  563 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHH--------------HH
Confidence            566899999999999999999999999999999999999999999754332        11111              11


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-HH-HHHHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-QV-TGLVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-ev-l~~L~~~~~~~~~~~~~  367 (381)
                      +.  .-.+|...+.++.+++...|.+.|.+|.... +- .+.-++-+....+|+-+
T Consensus       564 eh--nvsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~  617 (683)
T KOG0696|consen  564 EH--NVSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL  617 (683)
T ss_pred             Hc--cCcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence            11  2346778899999999999999999996431 11 12222345555666643

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=208.96  Aligned_cols=236  Identities=14%  Similarity=0.130  Sum_probs=168.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .++||+|.||+||+|+..  +.-||+|..+...+.  -.....+|+-+|+.|+|.|||+++++...++.+.+|+|||. .
T Consensus         7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-q   85 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-Q   85 (292)
T ss_pred             HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-H
Confidence            368999999999999986  567888887776544  35678899999999999999999999999999999999994 6


Q ss_pred             CHHHHhcCCCC-CCccc-----------------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRN-PSFTV-----------------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~-~~~~~-----------------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|..+...-.. .....                 ....++++||.|.|++.+    +.+|++|||+++.++.+.    ..
T Consensus        86 dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n----gelkladfglarafgipv----rc  157 (292)
T KOG0662|consen   86 DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN----GELKLADFGLARAFGIPV----RC  157 (292)
T ss_pred             HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC----CcEEecccchhhhcCCce----Ee
Confidence            88888765332 21111                 112356788888888887    669999999999875422    23


Q ss_pred             ccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHc----CCccc
Q 016850          235 VNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVA----GGVGG  308 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  308 (381)
                      ....+-|.+|.+|+++.+.+ |+...|+||.|||+.|+.. |++.|+...           +.++...+..    ...+.
T Consensus       158 ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d-----------vddqlkrif~~lg~p~ed~  226 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-----------VDDQLKRIFRLLGTPTEDQ  226 (292)
T ss_pred             eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc-----------HHHHHHHHHHHhCCCcccc
Confidence            34456799999999988764 7999999999999999987 677776432           2222221111    11111


Q ss_pred             hhhhh---cccccCCCC---------HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VRKWV---DRRLKDSYP---------VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~~~~---~~~~~~~~~---------~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..+.   +-...+.+|         +.....-++|+++.|.-+|..|.+++++++
T Consensus       227 wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  227 WPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            21111   111111122         122334589999999999999999998865

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.96  E-value=3.1e-29  Score=232.13  Aligned_cols=244  Identities=16%  Similarity=0.204  Sum_probs=161.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeC--------Ceee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSG--------NCGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--------~~~~  163 (381)
                      ..+.||+|+||.||+|.+.  ++.+++|+.......  ....+.+|+++++.++||||+++++++.+.        ..++
T Consensus        12 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~   91 (311)
T cd07866          12 ILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVY   91 (311)
T ss_pred             EEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEE
Confidence            4567999999999999985  788999887544322  234678899999999999999999987543        3469


Q ss_pred             EEEeccCCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          164 LVYEHVSGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      +||||++ ++|...+.... ..+...+..+                 |.+|+|.||+++++    +.+||+|||+++...
T Consensus        92 lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~----~~~~l~dfg~~~~~~  166 (311)
T cd07866          92 MVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ----GILKIADFGLARPYD  166 (311)
T ss_pred             EEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CCEEECcCccchhcc
Confidence            9999995 67888776532 3443333322                 23556888888876    569999999997653


Q ss_pred             cCCCCc-------cccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          226 EVSGNE-------SGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       226 ~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      ......       ........|++.|+|||++.+. .++.++|||||||++|||++|++||......        .....
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~--------~~~~~  238 (311)
T cd07866         167 GPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI--------DQLHL  238 (311)
T ss_pred             CCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence            211111       1122345678999999987654 5789999999999999999999999642221        01111


Q ss_pred             HHHHHcCCc-------cchhhhhcccccCCCC-------HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          298 ASEAVAGGV-------GGVRKWVDRRLKDSYP-------VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       298 ~~~~~~~~~-------~~~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .........       ..+............+       ....+.+.+++.+||+.||.+|||+.|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            110000000       0000000000000011       123367899999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=5.1e-29  Score=233.16  Aligned_cols=243  Identities=19%  Similarity=0.183  Sum_probs=164.2

Q ss_pred             ccccccCCCceEEEEEEC----CceEEEEEeccccc--ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeC----CeeeEE
Q 016850           97 AKKFTSSSASASWRGTIR----GKDVIIFQRKLRRS--LDLEQLRERLSVICRS-HHSSLIKLLGACVSG----NCGYLV  165 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~----~~~~lv  165 (381)
                      .+.||+|+||.||++...    +..||+|+......  ...+.+.+|+.+++++ .|||||++++.+...    ..++++
T Consensus         5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~   84 (332)
T cd07857           5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY   84 (332)
T ss_pred             EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence            467899999999999985    45888987653222  2356788899999999 599999999975432    457899


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+. ++|.+++..........+..                 .|++|+|+||+++++    +.+||+|||+++.+....
T Consensus        85 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~----~~~kl~Dfg~a~~~~~~~  159 (332)
T cd07857          85 EELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNAD----CELKICDFGLARGFSENP  159 (332)
T ss_pred             Eeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCC----CCEEeCcCCCceeccccc
Confidence            99995 79999997766555443332                 234667999999886    569999999998754322


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-  306 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  306 (381)
                      ...........|++.|+|||++.+ ..++.++|||||||++|+|++|++||......        .............. 
T Consensus       160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~  231 (332)
T cd07857         160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--------DQLNQILQVLGTPDE  231 (332)
T ss_pred             ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--------HHHHHHHHHhCCCCH
Confidence            221222344678999999998765 46899999999999999999999998642210        01110000000000 


Q ss_pred             --------cchhhh---hcccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 --------GGVRKW---VDRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 --------~~~~~~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              .....+   ........   ..+..+..+.+|+.+||+.||.+||++.++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                    000000   00000000   01123568999999999999999999999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=3e-29  Score=228.87  Aligned_cols=238  Identities=16%  Similarity=0.200  Sum_probs=167.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|+..  ++.+++|......  ....+.+.+|+.++++++|+||+++++++.+.+..++||||++ +
T Consensus         4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~   82 (282)
T cd07829           4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-M   82 (282)
T ss_pred             ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-c
Confidence            356899999999999985  7889999876543  2235678899999999999999999999999999999999996 6


Q ss_pred             CHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++... .......+..+                 |.+|+|.||+++++    +.++|+|||+++.....    ...
T Consensus        83 ~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~----~~~~l~d~g~~~~~~~~----~~~  154 (282)
T cd07829          83 DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD----GVLKLADFGLARAFGIP----LRT  154 (282)
T ss_pred             CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC----CCEEEecCCcccccCCC----ccc
Confidence            999999875 33443333222                 23456889999886    56999999999765321    112


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-------
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-------  306 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  306 (381)
                      .....++..|+|||.+.+. .++.++|||||||++||+++|++||......        ..............       
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  226 (282)
T cd07829         155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--------DQLFKIFQILGTPTEESWPGV  226 (282)
T ss_pred             cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHHHhCCCcHHHHHhh
Confidence            2334567889999988766 7899999999999999999999998642210        00110000000000       


Q ss_pred             -------cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 -------GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 -------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             ..+..+........ .+..+..+.+++.+||+.||.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         227 TKLPDYKPTFPKFPPKDLEKV-LPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccccccccccccCccchHHh-cccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                   00000000000011 1123678999999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.3e-30  Score=243.60  Aligned_cols=215  Identities=19%  Similarity=0.228  Sum_probs=170.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ...+|.|+|+.|-++.+.  ++..++|++...    ..+..+|+.++... +||||+++++.+.++.+.|+|||++.+|-
T Consensus       327 ~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~e  402 (612)
T KOG0603|consen  327 REELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGE  402 (612)
T ss_pred             ccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccH
Confidence            456999999999999884  788889886554    23455678777666 79999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHH-----------------HHHhhhcceeec-ccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVS-EENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~-~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+.+...+... .++..|                 ++||||+|||++ +.    .+++|+|||.++.....       .
T Consensus       403 ll~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~----g~lrltyFG~a~~~~~~-------~  470 (612)
T KOG0603|consen  403 LLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSA----GHLRLTYFGFWSELERS-------C  470 (612)
T ss_pred             HHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCC----CcEEEEEechhhhCchh-------h
Confidence            988887765443 333333                 347789999996 43    67999999999875331       3


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      .+.+-|..|.|||++....|+.++||||||++||+|++|+.||.....+                         .++...
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------------------------~ei~~~  525 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------------------------IEIHTR  525 (612)
T ss_pred             cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------------------------HHHHHh
Confidence            4556789999999999899999999999999999999999999743321                         111222


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      -..+.+...++..+++|+.+||+.||.+||+|.++..
T Consensus       526 i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  526 IQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             hcCCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            2233444678999999999999999999999999954

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.96  E-value=4e-29  Score=253.09  Aligned_cols=123  Identities=16%  Similarity=0.185  Sum_probs=99.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++......   ....+.+|+.++..++|||||++++++...+.+||||||++
T Consensus         8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~   87 (669)
T cd05610           8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLI   87 (669)
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCC
Confidence            4578999999999999996  889999987543322   24678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccccc
Q 016850          171 GANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      +|+|.++|..........+..                 +|++|+|+|||++.+    +.+||+|||+++
T Consensus        88 g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~----g~vkL~DFGls~  152 (669)
T cd05610          88 GGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNE----GHIKLTDFGLSK  152 (669)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCC----CCEEEEeCCCCc
Confidence            999999997655444333222                 234667889988776    569999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=3.6e-29  Score=222.91  Aligned_cols=204  Identities=16%  Similarity=0.199  Sum_probs=153.0

Q ss_pred             CCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcC
Q 016850          103 SSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRN  180 (381)
Q Consensus       103 G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~  180 (381)
                      |.||.||++++.  ++.+|+|++....     .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            899999999984  7889999875432     234455556666899999999999999999999999999999999976


Q ss_pred             CCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCcc
Q 016850          181 PRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG  243 (381)
Q Consensus       181 ~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~  243 (381)
                      ....+...+..+                 |++|+|+||+++.+    ..++++|||++..+..       ......++..
T Consensus        79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~~l~df~~~~~~~~-------~~~~~~~~~~  147 (237)
T cd05576          79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR----GHIQLTYFSRWSEVED-------SCDGEAVENM  147 (237)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC----CCEEEecccchhcccc-------ccccCCcCcc
Confidence            555544333322                 33567999999887    4599999998865432       1223456778


Q ss_pred             ccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCH
Q 016850          244 YMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPV  323 (381)
Q Consensus       244 y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (381)
                      |+|||.+.+..++.++||||+|+++|||++|+.||......                            .........+.
T Consensus       148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------------------------~~~~~~~~~~~  199 (237)
T cd05576         148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------------------------INTHTTLNIPE  199 (237)
T ss_pred             ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------------------------cccccccCCcc
Confidence            99999988888899999999999999999999887522110                            00000112334


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCChHHH
Q 016850          324 EVAEKMVLLGLQCVDEDPGKRPDMRQV  350 (381)
Q Consensus       324 ~~~~~l~~li~~cl~~dP~~RPs~~ev  350 (381)
                      .+++.+.+++.+||+.||++||++.+.
T Consensus       200 ~~~~~~~~li~~~l~~dp~~R~~~~~~  226 (237)
T cd05576         200 WVSEEARSLLQQLLQFNPTERLGAGVA  226 (237)
T ss_pred             cCCHHHHHHHHHHccCCHHHhcCCCcc
Confidence            456789999999999999999997443

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=2.8e-30  Score=249.63  Aligned_cols=225  Identities=20%  Similarity=0.275  Sum_probs=168.6

Q ss_pred             ccccCCCce-EEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           99 KFTSSSASA-SWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        99 ~lg~G~~g~-V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      .+|.|+.|+ ||+|.+.++.||||++...   ...-..+||..|+.- .|||||++|+.-.+...+||..|.| ..+|.+
T Consensus       516 ilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~~sL~d  591 (903)
T KOG1027|consen  516 ILGYGSNGTVVFRGVYEGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-ACSLQD  591 (903)
T ss_pred             HcccCCCCcEEEEEeeCCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-hhhHHH
Confidence            479998865 5999999999999975432   235678999999998 6999999999988899999999999 589999


Q ss_pred             HhcCCC--CC-------------------CccchHHHHHHhhhcceeecccCC-CccceEEcccccccccccCCCCcccc
Q 016850          177 CLRNPR--NP-------------------SFTVLSTWLSRMQSSSIIVSEENA-GSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       177 ~l~~~~--~~-------------------~~~~~~~~~~~l~~~Nill~~~~~-~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +++...  ..                   ..+.+.+.|+||||+|||+.-.+. ....++|+|||+++.+........ .
T Consensus       592 lie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~-r  670 (903)
T KOG1027|consen  592 LIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFS-R  670 (903)
T ss_pred             HHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhh-c
Confidence            998741  10                   022234567889999999987322 337899999999998754332222 3


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhC-CccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG-EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ..+..||-+|+|||++....-+.++||||+||++|++++| .+||.......             ..++.+. ..+..  
T Consensus       671 ~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-------------~NIl~~~-~~L~~--  734 (903)
T KOG1027|consen  671 LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-------------ANILTGN-YTLVH--  734 (903)
T ss_pred             ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-------------hhhhcCc-cceee--
Confidence            5678899999999999988888899999999999999996 99996432211             1111110 00000  


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                           .....++  ++.+||.+|+..||..||+|.+|+
T Consensus       735 -----L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  735 -----LEPLPDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             -----eccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                 0011122  899999999999999999999997

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=1.2e-28  Score=231.56  Aligned_cols=240  Identities=19%  Similarity=0.161  Sum_probs=162.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~lv  165 (381)
                      ..+.||+|+||.||+|...  +..||+|+.......  ..+.+.+|+++|++++||||+++++++....      .+++|
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv   98 (343)
T cd07880          19 DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLV   98 (343)
T ss_pred             EEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEE
Confidence            4567999999999999874  788999986443222  3456889999999999999999999987643      45899


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+ +++|.+++... ..++..+..+                 |++|+|+||++++.    +.+||+|||++.....  
T Consensus        99 ~e~~-~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~----~~~kl~dfg~~~~~~~--  170 (343)
T cd07880          99 MPFM-GTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNED----CELKILDFGLARQTDS--  170 (343)
T ss_pred             EecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CCEEEeeccccccccc--
Confidence            9999 78999888753 3343333222                 23566899999876    5699999999876422  


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHH-------HHHHH
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV-------DKASE  300 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~-------~~~~~  300 (381)
                           ......+++.|+|||++.+ ..++.++|||||||++|++++|+.||........    .....       .....
T Consensus       171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~  241 (343)
T cd07880         171 -----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ----LMEIMKVTGTPSKEFVQ  241 (343)
T ss_pred             -----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHHhcCCCCHHHHH
Confidence                 1223567899999998876 4578999999999999999999999964321000    00000       00000


Q ss_pred             HHcCC-ccchhhhhcccccC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 AVAGG-VGGVRKWVDRRLKD---SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 ~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+... ...+...+......   .....+++.+.+++.+||+.||.+|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00000 00000000000000   011234567899999999999999999999873

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.96  E-value=6.4e-29  Score=233.54  Aligned_cols=236  Identities=19%  Similarity=0.203  Sum_probs=162.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe------eeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNC------GYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~------~~lv  165 (381)
                      ....||+|+||.||+|++.  ++.|++|+.....  ....+.+.+|+.++++++||||+++++++...+.      .++|
T Consensus        19 ~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv   98 (343)
T cd07851          19 NLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLV   98 (343)
T ss_pred             EEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEE
Confidence            3567899999999999985  6788998765422  2234667889999999999999999998876554      8999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHH-----------------HHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      +||+ +++|.+++... .+.+..+..                 .|.+|+|.||+++++    +.+||+|||++.....  
T Consensus        99 ~e~~-~~~L~~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~----~~~kL~dfg~~~~~~~--  170 (343)
T cd07851          99 THLM-GADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNED----CELKILDFGLARHTDD--  170 (343)
T ss_pred             EecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----CCEEEccccccccccc--
Confidence            9999 68999998763 333332222                 233566889999876    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc----
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA----  303 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----  303 (381)
                           ......++..|+|||.+.+ ..++.++|||||||++||+++|+.||......        ...........    
T Consensus       171 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--------~~~~~i~~~~~~~~~  237 (343)
T cd07851         171 -----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--------DQLKRIMNLVGTPDE  237 (343)
T ss_pred             -----cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHhcCCCCH
Confidence                 1234568899999998765 36789999999999999999999999632211        00000000000    


Q ss_pred             --------CCccchhhhhcccccCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 --------GGVGGVRKWVDRRLKDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 --------~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              .....+...+.......+   ...+++.+.+++.+||..||.+|||+.+|++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence                    000000000111101111   1123678999999999999999999999865

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.9e-28  Score=220.98  Aligned_cols=279  Identities=16%  Similarity=0.223  Sum_probs=197.1

Q ss_pred             CchhHHHhhhcCCCCCceeeHHHHHHHhcCCcccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHh
Q 016850           65 SSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVIC  142 (381)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~  142 (381)
                      .....+.......+..+...+.|.....++...++||.|.|++||++.+.  .+.||+|+.+.... -.+....||++|+
T Consensus        51 ~~~eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~  129 (590)
T KOG1290|consen   51 DDEEQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQ  129 (590)
T ss_pred             CcccccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHH
Confidence            33345667788889999999999977677777899999999999999884  77888888654333 3456778999999


Q ss_pred             hcC-----C---CCcceEEEEEE----eCCeeeEEEeccCCCCHHHHhcCCC--CCCccchHH-----------------
Q 016850          143 RSH-----H---SSLIKLLGACV----SGNCGYLVYEHVSGANLADCLRNPR--NPSFTVLST-----------------  191 (381)
Q Consensus       143 ~l~-----h---~nIv~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~-----------------  191 (381)
                      +++     |   .+||+|+++|.    ++.++|+|+|++ |.+|..+|+...  .++...+..                 
T Consensus       130 ~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg  208 (590)
T KOG1290|consen  130 QVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG  208 (590)
T ss_pred             HHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence            983     3   36999999998    567899999999 889999997643  444333322                 


Q ss_pred             -HHHHhhhcceeecccC---------------------------------------------------------------
Q 016850          192 -WLSRMQSSSIIVSEEN---------------------------------------------------------------  207 (381)
Q Consensus       192 -~~~~l~~~Nill~~~~---------------------------------------------------------------  207 (381)
                       +|.||||+|||+....                                                               
T Consensus       209 IIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l  288 (590)
T KOG1290|consen  209 IIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASL  288 (590)
T ss_pred             ccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhh
Confidence             3334555555543220                                                               


Q ss_pred             --------------------------------------------------------------------------------
Q 016850          208 --------------------------------------------------------------------------------  207 (381)
Q Consensus       208 --------------------------------------------------------------------------------  207 (381)
                                                                                                      
T Consensus       289 ~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~  368 (590)
T KOG1290|consen  289 AGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSP  368 (590)
T ss_pred             cccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCc
Confidence                                                                                            


Q ss_pred             -------------------CCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHH
Q 016850          208 -------------------AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV  268 (381)
Q Consensus       208 -------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil  268 (381)
                                         ...+.+||+|||-|.....       ..+....|..|+|||++.+..|++.+||||++|++
T Consensus       369 ~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~k-------hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~  441 (590)
T KOG1290|consen  369 SSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHK-------HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMA  441 (590)
T ss_pred             CCccccccccccCCCCCCCccceeEEEeeccchhhhhh-------hhchhhhhhhccCcceeecCCCCCchhHHHHHHHH
Confidence                               0012378888888776322       23445579999999999999999999999999999


Q ss_pred             HHHHhCCccccccccCCcccccc-----hhHHHHHHHHHcCCccchhhhhcccc-------------------cCCCCHH
Q 016850          269 LELLSGEEVLKFVFDEGIDGYRR-----VSVVDKASEAVAGGVGGVRKWVDRRL-------------------KDSYPVE  324 (381)
Q Consensus       269 ~elltg~~pf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~  324 (381)
                      |||+||...|.....+.....+.     ..++..+...++-++...+++++++-                   +..++.+
T Consensus       442 FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e  521 (590)
T KOG1290|consen  442 FELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEE  521 (590)
T ss_pred             HHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHH
Confidence            99999999998766554322111     12233332223222222333333221                   1234667


Q ss_pred             HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          325 VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       325 ~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...++.+|+.-||+.+|++||||.+.++
T Consensus       522 ~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  522 DAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            7889999999999999999999999874

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=3.7e-28  Score=215.86  Aligned_cols=218  Identities=22%  Similarity=0.273  Sum_probs=165.4

Q ss_pred             CCceEEEEEEC--CceEEEEEeccccccc-HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcC
Q 016850          104 SASASWRGTIR--GKDVIIFQRKLRRSLD-LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRN  180 (381)
Q Consensus       104 ~~g~V~~~~~~--~~~v~vk~~~~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~  180 (381)
                      +||.||+|...  ++.+++|+........ .+.+.+|++++++++|+||+++++++......+++|||+++++|..++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999995  5889999876655444 68899999999999999999999999999999999999998899999977


Q ss_pred             CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCcc
Q 016850          181 PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG  243 (381)
Q Consensus       181 ~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~  243 (381)
                      ........+..++                 .+|+|.||+++++    ..++|+|||.+......     .......++..
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~----~~~~l~d~~~~~~~~~~-----~~~~~~~~~~~  151 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED----GHVKLADFGLARQLDPG-----GLLTTFVGTPE  151 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC----CcEEEccccceeeeccc-----cccccccCCcC
Confidence            5544433333222                 3455888888876    56999999999875321     13345668999


Q ss_pred             ccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCH
Q 016850          244 YMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPV  323 (381)
Q Consensus       244 y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (381)
                      |++||.+.+..++.++||||||++++++++|..||......       ....+               ............
T Consensus       152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~---------------~~~~~~~~~~~~  209 (244)
T smart00220      152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------LELFK---------------KIGKPKPPFPPP  209 (244)
T ss_pred             CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHH---------------HHhccCCCCccc
Confidence            99999998888899999999999999999999998632110       00111               111111111011


Q ss_pred             H--HHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          324 E--VAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       324 ~--~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .  ++.++.+++.+||..||++||++.++++
T Consensus       210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            1  5678999999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=7.3e-28  Score=211.21  Aligned_cols=247  Identities=15%  Similarity=0.232  Sum_probs=182.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecc---cccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKL---RRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~---~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ...||+|+|++|..+++.  .+-+|+|+++.   ..+.+.+=++.|..+..+- +||.+|-++.+|.....+++|.||++
T Consensus       255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~  334 (593)
T KOG0695|consen  255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN  334 (593)
T ss_pred             eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEec
Confidence            567899999999999986  66788877654   3334555566777777776 79999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ||+|--+++..+.+++..+..+                 .++||..|+|++..    +++||+|+|..+.-    .....
T Consensus       335 ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldae----ghikltdygmcke~----l~~gd  406 (593)
T KOG0695|consen  335 GGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAE----GHIKLTDYGMCKEG----LGPGD  406 (593)
T ss_pred             CcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccC----CceeecccchhhcC----CCCCc
Confidence            9999999988777765543322                 24677889999988    67999999998752    22334


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ...+++|||.|.|||++++..|+..+|.|+|||+++||+.|+.||.....+..    ..+..+...+.+.          
T Consensus       407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~----d~ntedylfqvil----------  472 (593)
T KOG0695|consen  407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNP----DMNTEDYLFQVIL----------  472 (593)
T ss_pred             ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCc----ccchhHHHHHHHh----------
Confidence            56789999999999999999999999999999999999999999985443221    1222333333332          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH---HHHHHHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR---QVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~---evl~~L~~~~~~~~~~~~~  367 (381)
                      .+.++  .|...+-++..+++.-|.+||++|....   -+..+-..-+....+|+.+
T Consensus       473 ekqir--iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~l  527 (593)
T KOG0695|consen  473 EKQIR--IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLL  527 (593)
T ss_pred             hhccc--ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHH
Confidence            22222  3445566778889999999999996432   2223333445667777653

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=1.2e-27  Score=231.65  Aligned_cols=243  Identities=15%  Similarity=0.143  Sum_probs=150.9

Q ss_pred             hcCC-cccccccCCCceEEEEEE------------------CCceEEEEEecccccccHHHH--------------HHHH
Q 016850           92 TNNF-LAKKFTSSSASASWRGTI------------------RGKDVIIFQRKLRRSLDLEQL--------------RERL  138 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~------------------~~~~v~vk~~~~~~~~~~~~~--------------~~E~  138 (381)
                      .++| ..++||+|+||.||+|.+                  .++.||||++........++|              ..|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            3456 356789999999999964                  245789998765433222333              3466


Q ss_pred             HHHhhcCCCCc-----ceEEEEEEe--------CCeeeEEEeccCCCCHHHHhcCCCCC---------------------
Q 016850          139 SVICRSHHSSL-----IKLLGACVS--------GNCGYLVYEHVSGANLADCLRNPRNP---------------------  184 (381)
Q Consensus       139 ~il~~l~h~nI-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------  184 (381)
                      .++.+++|.++     ++++++|..        .+..+|||||+++|+|.++|+.....                     
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            77777766554     778887753        35689999999999999999753110                     


Q ss_pred             ---Ccc-------chH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccc
Q 016850          185 ---SFT-------VLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGY  244 (381)
Q Consensus       185 ---~~~-------~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y  244 (381)
                         .+.       ++.          .+|+||+|+||+++.+    ..+||+|||++.....   ..........+|+.|
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~----~~~kL~DFGla~~~~~---~~~~~~~~g~~tp~Y  376 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD----GQVKIIDFGAAVDMCT---GINFNPLYGMLDPRY  376 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC----CcEEEEeCcCcccccc---CCccCccccCCCcce
Confidence               000       111          2244677999999876    5699999999976432   111111223458899


Q ss_pred             cchhhhcCCC--------------------CC--cchhHHHHHHHHHHHHhCCc-cccccccCCcccccchhHHHHHHHH
Q 016850          245 MAPEFQASGV--------------------VT--QKCDVYAFGVVVLELLSGEE-VLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       245 ~aPE~~~~~~--------------------~~--~~sDIwSlGvil~elltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      +|||.+....                    |+  .+.||||+||++++|++|.. ||.....-.           .....
T Consensus       377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~-----------~~~~~  445 (507)
T PLN03224        377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFN-----------TELRQ  445 (507)
T ss_pred             eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhh-----------hHHhh
Confidence            9999875322                    11  24799999999999999875 654211100           00000


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCC---CCCCChHHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP---GKRPDMRQVTG  352 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~  352 (381)
                      .......+..+.............++..++|+.+||..+|   .+|+|+.|+++
T Consensus       446 ~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        446 YDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             ccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            0000000111111111112233467889999999999876   68999999975

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=7.2e-28  Score=238.42  Aligned_cols=238  Identities=14%  Similarity=0.121  Sum_probs=141.1

Q ss_pred             hcCC-cccccccCCCceEEEEEEC------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEE------EEe
Q 016850           92 TNNF-LAKKFTSSSASASWRGTIR------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGA------CVS  158 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~~------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~------~~~  158 (381)
                      .++| ..+.||+|+||.||+|++.      +..||+|+......  .+...+|  .++...+.+++.++..      ...
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~  206 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK  206 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence            3455 3567899999999999984      56888887543221  1212211  1222223333332221      235


Q ss_pred             CCeeeEEEeccCCCCHHHHhcCCCCCC---------------------------ccchH----------HHHHHhhhcce
Q 016850          159 GNCGYLVYEHVSGANLADCLRNPRNPS---------------------------FTVLS----------TWLSRMQSSSI  201 (381)
Q Consensus       159 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---------------------------~~~~~----------~~~~~l~~~Ni  201 (381)
                      +..++|||||+++++|.+++.......                           ..+++          .+|+||||+||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI  286 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI  286 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence            677999999999999999987543110                           00111          23447789999


Q ss_pred             eecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCC----------------------CCCcch
Q 016850          202 IVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG----------------------VVTQKC  259 (381)
Q Consensus       202 ll~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~s  259 (381)
                      |+++.+   ..+||+|||+++.+..   ..........|++.|+|||.+...                      .++.++
T Consensus       287 Ll~~~~---~~~KL~DFGlA~~l~~---~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        287 IFSEGS---GSFKIIDLGAAADLRV---GINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             EEeCCC---CcEEEEeCCCcccccc---ccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            998643   5699999999986432   122233456789999999965322                      234567


Q ss_pred             hHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh---hcccccCC------CCHHHHHHHH
Q 016850          260 DVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW---VDRRLKDS------YPVEVAEKMV  330 (381)
Q Consensus       260 DIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~l~  330 (381)
                      |||||||++|||+++..++...             .......+......+..+   +.+.....      ..........
T Consensus       361 DVwSlGviL~el~~~~~~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  427 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNLRSDSN-------------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGW  427 (566)
T ss_pred             ccHHHHHHHHHHHhCcCCCchH-------------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHH
Confidence            9999999999999976654311             000011110000111111   11111000      0001123466


Q ss_pred             HHHHHhhccCCCCCCChHHHHH
Q 016850          331 LLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       331 ~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +|+.+||+.||++|||+.++++
T Consensus       428 dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        428 ELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             HHHHHHccCCcccCCCHHHHhC
Confidence            9999999999999999999976

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=2.6e-29  Score=231.20  Aligned_cols=245  Identities=18%  Similarity=0.193  Sum_probs=170.8

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcC------CCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSH------HSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~------h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ....|+|-|++|.+|..  .+..||||++..... -.+.=.+|++||++|.      --|+++|+-.|...+++|||+|-
T Consensus       437 ~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~  515 (752)
T KOG0670|consen  437 QGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEP  515 (752)
T ss_pred             EeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehh
Confidence            45679999999999988  488999999754322 2344567999999994      34899999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC---CCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          169 VSGANLADCLRNPRN---PSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~---~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      + ..+|.++|+..+.   +.+..+                 ...|.+|||.|||+++.+   ..+||||||.|.....  
T Consensus       516 L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k---~iLKLCDfGSA~~~~e--  589 (752)
T KOG0670|consen  516 L-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK---NILKLCDFGSASFASE--  589 (752)
T ss_pred             h-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc---ceeeeccCcccccccc--
Confidence            9 6899999987442   222222                 223457789999998876   7899999999977532  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCc--------ccccchhHHH-HHH
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI--------DGYRRVSVVD-KAS  299 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~--------~~~~~~~~~~-~~~  299 (381)
                          ...+...-+..|.|||++.|..|++..|+||+||+||||.||+-.|++..+...        +.++...+-. ++.
T Consensus       590 ----neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~  665 (752)
T KOG0670|consen  590 ----NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK  665 (752)
T ss_pred             ----ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence                223445567799999999999999999999999999999999999986443221        1111111100 000


Q ss_pred             HHHcC--------Cccc--------hhhhhcc------cc-----cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          300 EAVAG--------GVGG--------VRKWVDR------RL-----KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       300 ~~~~~--------~~~~--------~~~~~~~------~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..-..        ..+.        +...+.+      .+     .+...+.+...|.+|+.+||..||++|.+..++|.
T Consensus       666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            00000        0000        0001111      00     11112446678999999999999999999988864

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.1e-27  Score=225.02  Aligned_cols=182  Identities=15%  Similarity=0.180  Sum_probs=146.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||-|+||+|.++.-.  ...+|+|.++..+..   ....+..|..||..-+++-||+||-.|.+.+.+|+||||++|
T Consensus       634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPG  713 (1034)
T KOG0608|consen  634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG  713 (1034)
T ss_pred             EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCC
Confidence            467999999999999764  456777765544433   345577899999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc---
Q 016850          172 ANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE---  231 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~---  231 (381)
                      |++-.+|...+.+++..+.                 .+|+||||.|||+|.+    ++|||+||||+.-+....+..   
T Consensus       714 GDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd----GHIKLTDFGLCTGfRWTHdskYYq  789 (1034)
T KOG0608|consen  714 GDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD----GHIKLTDFGLCTGFRWTHDSKYYQ  789 (1034)
T ss_pred             ccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccC----Cceeeeeccccccceecccccccc
Confidence            9999999887777655443                 3456899999999998    679999999986442211110   


Q ss_pred             -----------------------------------cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCc
Q 016850          232 -----------------------------------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEE  276 (381)
Q Consensus       232 -----------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~  276 (381)
                                                         .......+||+.|+|||++....|+..+|.||.|||||||+.|++
T Consensus       790 ~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~  869 (1034)
T KOG0608|consen  790 EGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQP  869 (1034)
T ss_pred             CCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCC
Confidence                                               011234679999999999999999999999999999999999999


Q ss_pred             cccccc
Q 016850          277 VLKFVF  282 (381)
Q Consensus       277 pf~~~~  282 (381)
                      ||-...
T Consensus       870 pf~~~t  875 (1034)
T KOG0608|consen  870 PFLADT  875 (1034)
T ss_pred             CccCCC
Confidence            996543

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=7.4e-28  Score=197.94  Aligned_cols=175  Identities=18%  Similarity=0.205  Sum_probs=137.8

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ...||+|+||.|-+-++  .|+-.|+|.+...-.. ..+++.+|+.+.++. .+|.+|.+||.+.+....||.||.| ..
T Consensus        51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~t  129 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DT  129 (282)
T ss_pred             hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hh
Confidence            46799999999976666  5888888887554333 467788899987776 8999999999999999999999999 47


Q ss_pred             CHHHHhcC----CCCCCc------------------cchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          173 NLADCLRN----PRNPSF------------------TVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       173 sL~~~l~~----~~~~~~------------------~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +|..+-.+    ....++                  .++..+|+|+||+|||++.+    +++|+||||.+-.+.     
T Consensus       130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~----GqVKiCDFGIsG~L~-----  200 (282)
T KOG0984|consen  130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYD----GQVKICDFGISGYLV-----  200 (282)
T ss_pred             hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccC----CcEEEcccccceeeh-----
Confidence            88776432    332221                  12445778999999999998    669999999997652     


Q ss_pred             ccccccccCCCccccchhhhcC----CCCCcchhHHHHHHHHHHHHhCCcccccc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS----GVVTQKCDVYAFGVVVLELLSGEEVLKFV  281 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDIwSlGvil~elltg~~pf~~~  281 (381)
                      .+...+-..|.-.|||||.+..    ..|+.++||||||++++||.++++||+..
T Consensus       201 dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  201 DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            2222333678999999998753    37999999999999999999999999743

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=9.1e-29  Score=233.69  Aligned_cols=230  Identities=17%  Similarity=0.250  Sum_probs=178.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ....+|.|.||.|||+++.  +...|+|.+++....+..-+.+|+-+++.++|||||.++|.+...+.+||.||||.+|+
T Consensus        19 llqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggs   98 (829)
T KOG0576|consen   19 LLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGS   98 (829)
T ss_pred             heeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCc
Confidence            4578999999999999985  88999999999888888889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+.-+-.....+.++                 ..+++|||-+||++.+.    +.+|++|||.+-.+..    ......
T Consensus        99 lQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~----gDvklaDfgvsaqita----ti~Krk  170 (829)
T KOG0576|consen   99 LQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDE----GDVKLADFGVSAQITA----TIAKRK  170 (829)
T ss_pred             ccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeeccc----CceeecccCchhhhhh----hhhhhh
Confidence            9987665444433332                 23567899999999998    5599999999876532    334556


Q ss_pred             ccCCCccccchhhh---cCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          237 KIEGTRGYMAPEFQ---ASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       237 ~~~gt~~y~aPE~~---~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .+.||+.|||||+.   +.+.|+..+|||++|+...|+-.-++|.-..           .-.....-....+       +
T Consensus       171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdl-----------hpmr~l~LmTkS~-------~  232 (829)
T KOG0576|consen  171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDL-----------HPMRALFLMTKSG-------F  232 (829)
T ss_pred             cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccccc-----------chHHHHHHhhccC-------C
Confidence            78999999999965   4678999999999999999998877774210           0011000000000       1


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ++ ...+.+....+-+.+|++.||.++|++||+++.++.
T Consensus       233 qp-p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  233 QP-PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             CC-CcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            11 111224467888999999999999999999998875

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.8e-28  Score=207.51  Aligned_cols=245  Identities=17%  Similarity=0.213  Sum_probs=166.9

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~e  167 (381)
                      .+.||.|+||.||.+++.  |+.|+.|+......  ...+++.+|+++|..++|.|++..+++..-.     .++|+|+|
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            467999999999999984  88899988643222  2568899999999999999999999987643     34789999


Q ss_pred             ccCCCCHHHHhcCCCCCCc-------cchHHHHHHhhhcceeecccCCC------ccceEEcccccccccccCCCCcccc
Q 016850          168 HVSGANLADCLRNPRNPSF-------TVLSTWLSRMQSSSIIVSEENAG------SLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~-------~~~~~~~~~l~~~Nill~~~~~~------~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +| ..+|.+.|.....+..       -+++..+.+||.+|||+++.+++      |..+||||||+++...   ......
T Consensus       138 Lm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee---~d~~~h  213 (449)
T KOG0664|consen  138 LM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWD---QRDRLN  213 (449)
T ss_pred             HH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccc---hhhhhh
Confidence            99 4799998876544332       23344444555555555555442      2679999999998742   233344


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC--------
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG--------  305 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  305 (381)
                      .+..+-|..|+|||++.+. .|+.+.||||.|||+.||+.++-.|.....-        ..++.+.+.+...        
T Consensus       214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi--------qQL~lItdLLGTPs~EaMr~A  285 (449)
T KOG0664|consen  214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI--------EQLQMIIDLLGTPSQEAMKYA  285 (449)
T ss_pred             hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH--------HHHHHHHHHhCCCcHHHHHHH
Confidence            5566778999999999875 6899999999999999999999888643221        1111111111000        


Q ss_pred             -ccchhhhhcccccCC---------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          306 -VGGVRKWVDRRLKDS---------YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       306 -~~~~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                       .+.-..++....+..         -+.....+..++..+++..||++|.+..+.+..
T Consensus       286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence             011112222222111         122334567889999999999999998888654

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.93  E-value=3.1e-24  Score=185.94  Aligned_cols=191  Identities=25%  Similarity=0.372  Sum_probs=154.7

Q ss_pred             cccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850          100 FTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus       100 lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      ||+|++|.||++...  ++.+++|+....... ..+.+.+|+++++.++|++|+++++++......+++|||+++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            689999999999997  888999986554332 35789999999999999999999999999999999999999999999


Q ss_pred             HhcCC-CCCCccchHHH-----------------HHHhhhcceeecc-cCCCccceEEcccccccccccCCCCccccccc
Q 016850          177 CLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSE-ENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       177 ~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~-~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      ++... .......+..+                 |.+|+|.||+++. .    ..++|+|||.+........    ....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~----~~~~l~d~~~~~~~~~~~~----~~~~  152 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDN----GKVKLADFGLSKLLTSDKS----LLKT  152 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCC----CcEEEecCCceEEccCCcc----hhhc
Confidence            99865 23333332222                 2245689999988 4    5599999999976532110    2334


Q ss_pred             cCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+...|++||.+... .++.+.|+|++|++++++                                             
T Consensus       153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------  187 (215)
T cd00180         153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------  187 (215)
T ss_pred             ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence            5688899999998876 788999999999999998                                             


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                                ..+.+++.+|++.||.+||++.++++.
T Consensus       188 ----------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ----------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ----------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                      358889999999999999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.92  E-value=5.6e-26  Score=211.76  Aligned_cols=174  Identities=19%  Similarity=0.256  Sum_probs=141.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--------cHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--------DLEQLRERLSVICRSH---HSSLIKLLGACVSGNCG  162 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~  162 (381)
                      ..+.+|+|+||.|++|.++  ...|++|.+....-.        ..-.+..||+||..|+   |+||++++++|++++.+
T Consensus       565 tlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~y  644 (772)
T KOG1152|consen  565 TLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYY  644 (772)
T ss_pred             eeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCee
Confidence            4678999999999999996  566777765432211        1233567999999996   99999999999999999


Q ss_pred             eEEEecc-CCCCHHHHhcCCCCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          163 YLVYEHV-SGANLADCLRNPRNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       163 ~lv~e~~-~~gsL~~~l~~~~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      ||+||-- ++-+|+++|.....+.+..+.                 ++|+|||-+|++++.+    +.+||+|||.|...
T Consensus       645 yl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~----g~~klidfgsaa~~  720 (772)
T KOG1152|consen  645 YLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSN----GFVKLIDFGSAAYT  720 (772)
T ss_pred             EEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecC----CeEEEeeccchhhh
Confidence            9999975 566999999877666544433                 3456777888888887    56999999998763


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCcccc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLK  279 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~  279 (381)
                            .......++||..|.|||++.+..| +..-|||++||+||-++..+.||.
T Consensus       721 ------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  721 ------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence                  4456677899999999999999887 688999999999999999999986

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.91  E-value=1.9e-25  Score=195.08  Aligned_cols=245  Identities=19%  Similarity=0.134  Sum_probs=164.5

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEEE
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv~  166 (381)
                      ...+|.|.- .|..+.+  .+++|++|+.....  ....++..+|..++..+.|+||++++.+|.-.      ...|+||
T Consensus        22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~  100 (369)
T KOG0665|consen   22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVM  100 (369)
T ss_pred             ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHH
Confidence            356777777 6666655  48899999864432  22457788999999999999999999998743      3579999


Q ss_pred             eccCCCCHHHHhcCCCC---------------CCccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          167 EHVSGANLADCLRNPRN---------------PSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~---------------~~~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ||| .++|.+.+.....               ...+....+|+||||+||++..+    ..+||.|||+|+.-+     .
T Consensus       101 e~m-~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~----~~lKi~dfg~ar~e~-----~  170 (369)
T KOG0665|consen  101 ELM-DANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSD----CTLKILDFGLARTED-----T  170 (369)
T ss_pred             Hhh-hhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecch----hheeeccchhhcccC-----c
Confidence            999 5899998873210               01222335567899999999988    669999999997632     2


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCc-------ccccchhHHHHHHHHHcC
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI-------DGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~-------~~~~~~~~~~~~~~~~~~  304 (381)
                      .-..+..+.|..|.|||++.+-.|...+||||+||++.||++|+-.|++...-+.       .+.+...+.+......+.
T Consensus       171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~  250 (369)
T KOG0665|consen  171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN  250 (369)
T ss_pred             ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence            2456778899999999999888899999999999999999999998873211000       000111111111111000


Q ss_pred             ---Cccchhhh-hcccccCC-------CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 ---GVGGVRKW-VDRRLKDS-------YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ---~~~~~~~~-~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         ........ +...+++.       .++--...+.+++.+||..||++|.++.++|+
T Consensus       251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence               00000000 01111110       01123456899999999999999999999864

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=9.7e-25  Score=186.56  Aligned_cols=240  Identities=15%  Similarity=0.177  Sum_probs=163.4

Q ss_pred             cccccccCCCceEEEEEECC--ceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEE-EEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIRG--KDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGA-CVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~--~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~-~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|.||.+-++.+++  +.+++|.+ ........+|.+|+.---.| .|.||+..|++ |+..+.++++|||+|.
T Consensus        28 I~k~lgeG~FgkIlL~eHr~s~t~ivlKav-p~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~  106 (378)
T KOG1345|consen   28 INKQLGEGRFGKILLAEHRQSKTRIVLKAV-PRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPR  106 (378)
T ss_pred             HHHHhcccceeeEEeeeccCCceEEEeecc-CcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCcc
Confidence            45778999999999999984  45555543 33344678899999877777 69999999884 5677888999999999


Q ss_pred             CCHHHHhcCCCCC------CccchHHH----------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          172 ANLADCLRNPRNP------SFTVLSTW----------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       172 gsL~~~l~~~~~~------~~~~~~~~----------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |+|..-+...+..      -..+++..          |++||.+|||+-+.+-  ..+||||||+.+..+.       ..
T Consensus       107 gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df--~rvKlcDFG~t~k~g~-------tV  177 (378)
T KOG1345|consen  107 GDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADF--YRVKLCDFGLTRKVGT-------TV  177 (378)
T ss_pred             chhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCc--cEEEeeecccccccCc-------ee
Confidence            9999988765422      12333333          4455566666554433  4699999999876432       22


Q ss_pred             cccCCCccccchhhhcC---C--CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          236 NKIEGTRGYMAPEFQAS---G--VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~---~--~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ....-+..|.+||.+..   +  ..++.+|||.|||++|.++||++||+-..-   ...+......|...          
T Consensus       178 ~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~---~d~~Y~~~~~w~~r----------  244 (378)
T KOG1345|consen  178 KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASI---MDKPYWEWEQWLKR----------  244 (378)
T ss_pred             hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhc---cCchHHHHHHHhcc----------
Confidence            23345778999997642   2  357889999999999999999999973211   11112222222111          


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                        ..+.++..+ ...++.+..+.++-|..++++|--..++-++.+....|.
T Consensus       245 --k~~~~P~~F-~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  245 --KNPALPKKF-NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             --cCccCchhh-cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence              111111111 235778999999999999999977777776666665553

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.90  E-value=2.5e-24  Score=179.90  Aligned_cols=245  Identities=12%  Similarity=0.137  Sum_probs=163.1

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeC--CeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSG--NCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~--~~~~lv~e~~~~  171 (381)
                      ..++|+|-|+.||.|..  ++..++||+.+..   ..+.+.+|++||..|. ||||++|+++..+.  ....||+||+.+
T Consensus        43 vrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n  119 (338)
T KOG0668|consen   43 VRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNN  119 (338)
T ss_pred             HHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhcc
Confidence            46799999999999985  5778888876543   3578999999999996 99999999998874  457899999998


Q ss_pred             CCHHHHhcCCCCCC--------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          172 ANLADCLRNPRNPS--------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       172 gsL~~~l~~~~~~~--------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+...+...-....              .+...+.|+|+||.|++++...   -.++|+|.|+|.....     ....+-
T Consensus       120 ~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~---rkLrlIDWGLAEFYHp-----~~eYnV  191 (338)
T KOG0668|consen  120 TDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL---RKLRLIDWGLAEFYHP-----GKEYNV  191 (338)
T ss_pred             ccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh---ceeeeeecchHhhcCC-----Cceeee
Confidence            88766554322111              1112245667888888888764   4599999999987532     223344


Q ss_pred             cCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCccc------ccchhHHHHHHHHHcCCccchh
Q 016850          238 IEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG------YRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .+.+..|--||.+.. ..|+...|+|||||++..|+..+.||-.-.+.....      .....+.....+.-..-...+.
T Consensus       192 RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~  271 (338)
T KOG0668|consen  192 RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFE  271 (338)
T ss_pred             eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHh
Confidence            567788899998865 458999999999999999999998884211110000      0000000000000000001111


Q ss_pred             hhhcccccC--------CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKD--------SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .++....+.        ....-.++++.||+.+.|..|..+|+||.|++.
T Consensus       272 ~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  272 DILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             hHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            111111111        011123588999999999999999999999864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.90  E-value=8.4e-23  Score=179.52  Aligned_cols=177  Identities=22%  Similarity=0.323  Sum_probs=141.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ...||+|++|.||+|.+.  ++.+++|........ ..+.+.+|++.+++++|+||+++++++......++++||+++++
T Consensus         4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   83 (225)
T smart00221        4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD   83 (225)
T ss_pred             eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence            456899999999999996  588999987655444 56789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCC-CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPRN-PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~~-~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++..... .....+..+                 |.++++.||+++..    ..++|+|||++.......   ....
T Consensus        84 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~----~~~~l~d~g~~~~~~~~~---~~~~  156 (225)
T smart00221       84 LFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD----GLVKLADFGLARFIHRDL---AALL  156 (225)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CCEEEeeCceeeEecCcc---cccc
Confidence            9999987554 343332222                 22456889998886    569999999998753321   1123


Q ss_pred             cccCCCccccchhhh-cCCCCCcchhHHHHHHHHHHHHhCCccccc
Q 016850          236 NKIEGTRGYMAPEFQ-ASGVVTQKCDVYAFGVVVLELLSGEEVLKF  280 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~-~~~~~~~~sDIwSlGvil~elltg~~pf~~  280 (381)
                      ....++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus       157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            345688899999988 556778899999999999999999999953

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.89  E-value=6.3e-23  Score=174.02  Aligned_cols=160  Identities=18%  Similarity=0.204  Sum_probs=110.8

Q ss_pred             CCHHHHhcCC-CCCCccchHHHHHH-------h----hhcceeecccCCCccceEEcccccccccccCCCCccccccccC
Q 016850          172 ANLADCLRNP-RNPSFTVLSTWLSR-------M----QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIE  239 (381)
Q Consensus       172 gsL~~~l~~~-~~~~~~~~~~~~~~-------l----~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~  239 (381)
                      |+|.++|..+ ..+++.++..++.+       |    ||+||+++++    +.+|+  ||+++....         ....
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~kp~Nil~~~~----~~~~~--fG~~~~~~~---------~~~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQAKSGNILLTWD----GLLKL--DGSVAFKTP---------EQSR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcCCcccEeEcCc----cceee--ccceEeecc---------ccCC
Confidence            7899999864 34666655554443       3    4899999887    55888  999876432         1126


Q ss_pred             CCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccC
Q 016850          240 GTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKD  319 (381)
Q Consensus       240 gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (381)
                      ||+.|||||++.+..++.++|||||||++|||++|+.||......       .............        ..+. ..
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~--------~~~~-~~  129 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-------SAILEILLNGMPA--------DDPR-DR  129 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-------cHHHHHHHHHhcc--------CCcc-cc
Confidence            899999999999999999999999999999999999998532110       0111111110000        0000 00


Q ss_pred             CCCHHHHH--HHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          320 SYPVEVAE--KMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       320 ~~~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ..+..+..  .+.+++.+||..||.+||++.++++.+..+..+..
T Consensus       130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~~  174 (176)
T smart00750      130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAETL  174 (176)
T ss_pred             ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHHh
Confidence            11223444  69999999999999999999999999888766543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.89  E-value=1.1e-23  Score=190.44  Aligned_cols=252  Identities=16%  Similarity=0.169  Sum_probs=163.9

Q ss_pred             cccccccCCCceEEEEEEC-----CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ...+||+|+|++||++++.     ...||+|.+..  .....++.+|++.|..+ -+.||+++.+++..++..++||||+
T Consensus        40 ~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~--ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~  117 (418)
T KOG1167|consen   40 VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR--TSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYF  117 (418)
T ss_pred             hhccccccchhhhhhhhHhhhccccceEeeeeccc--ccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEeccc
Confidence            3568999999999999863     46788887543  44567899999999999 5999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCC--------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCC-------
Q 016850          170 SGANLADCLRNPRNPS--------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS-------  228 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~--------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~-------  228 (381)
                      +.-+..+++..-....              .+.-.++|+||||+|+|.+..-   ..-.|.|||+|.......       
T Consensus       118 ~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t---~rg~LvDFgLA~~~d~~~~~~~s~~  194 (418)
T KOG1167|consen  118 EHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRT---QRGVLVDFGLAQRYDGYQQTEHSRS  194 (418)
T ss_pred             CccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccccc---CCceEEechhHHHHHhhhhhhhhhh
Confidence            9888888776533111              1112234456666666655432   347999999997211000       


Q ss_pred             ---------C------------------------CccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhC
Q 016850          229 ---------G------------------------NESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSG  274 (381)
Q Consensus       229 ---------~------------------------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg  274 (381)
                               .                        ..........||++|.|||++.. ..-++++||||.|||++-++++
T Consensus       195 ~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~  274 (418)
T KOG1167|consen  195 YSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSR  274 (418)
T ss_pred             hhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcc
Confidence                     0                        00011234569999999998875 4568999999999999999999


Q ss_pred             CccccccccCCcccccchhHHHHH--HHH--HcCC--------c----------cch-hhhhcc-c---ccC-CCCHHHH
Q 016850          275 EEVLKFVFDEGIDGYRRVSVVDKA--SEA--VAGG--------V----------GGV-RKWVDR-R---LKD-SYPVEVA  326 (381)
Q Consensus       275 ~~pf~~~~~~~~~~~~~~~~~~~~--~~~--~~~~--------~----------~~~-~~~~~~-~---~~~-~~~~~~~  326 (381)
                      +.||-...++.....+...+..+.  .+.  ..+.        .          ..+ .+.+.+ +   ... ......+
T Consensus       275 ~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~  354 (418)
T KOG1167|consen  275 RYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFP  354 (418)
T ss_pred             ccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccccccc
Confidence            999964443332211111111110  000  0000        0          000 000000 0   010 1112234


Q ss_pred             HHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          327 EKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       327 ~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+.+|+.+||+.||.+|.|++++|+
T Consensus       355 ~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  355 ALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             HHHHHHHHHHccCChhhcccHHHHhc
Confidence            57899999999999999999999974

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.88  E-value=4.6e-23  Score=176.44  Aligned_cols=224  Identities=20%  Similarity=0.299  Sum_probs=168.0

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+|.+...|..|+|++.|..+++|+...+...  ...+|..|+-.|+-+.||||+.++|.|....++.++..||+.|+|+
T Consensus       196 tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly  275 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY  275 (448)
T ss_pred             hhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence            45788889999999999999999987766554  3467889999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCCCc--cchHHHH-------H------------HhhhcceeecccCCCccceEEc--ccccccccccCCCCcc
Q 016850          176 DCLRNPRNPSF--TVLSTWL-------S------------RMQSSSIIVSEENAGSLCAKIC--HFGTAELCGEVSGNES  232 (381)
Q Consensus       176 ~~l~~~~~~~~--~~~~~~~-------~------------~l~~~Nill~~~~~~~~~~kl~--DFG~a~~~~~~~~~~~  232 (381)
                      ..|++....-.  .|+..+.       .            +|.+..++++++    .+.+|.  |--++-.         
T Consensus       276 nvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmided----ltarismad~kfsfq---------  342 (448)
T KOG0195|consen  276 NVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDED----LTARISMADTKFSFQ---------  342 (448)
T ss_pred             HHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecch----hhhheecccceeeee---------
Confidence            99998653321  1111111       1            223667777776    445543  3322221         


Q ss_pred             ccccccCCCccccchhhhcCCCC---CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVV---TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~---~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                        .....-.|.||+||.++...-   -.++|+|||+|++|||.|++.||.....-..                      -
T Consensus       343 --e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec----------------------g  398 (448)
T KOG0195|consen  343 --EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC----------------------G  398 (448)
T ss_pred             --ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----------------------h
Confidence              112234789999999886543   3679999999999999999999975433111                      0


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      .++.-..++...|+.++..+..|+.-|+..||.+||.+..|+-.|+++.
T Consensus       399 mkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  399 MKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             hhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            1222334566678889999999999999999999999999999998763

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.85  E-value=5e-22  Score=205.94  Aligned_cols=185  Identities=17%  Similarity=0.143  Sum_probs=119.9

Q ss_pred             hhcCC-CCcceEEEEEE-------eCCeeeEEEeccCCCCHHHHhcCCC-CCCccchH-----------------HHHHH
Q 016850          142 CRSHH-SSLIKLLGACV-------SGNCGYLVYEHVSGANLADCLRNPR-NPSFTVLS-----------------TWLSR  195 (381)
Q Consensus       142 ~~l~h-~nIv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~-----------------~~~~~  195 (381)
                      +.++| +||++++++|.       ....++++|||+ +++|.++|.... ..+...+.                 .+|+|
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            35556 68888999872       345678889998 679999997532 23322222                 23456


Q ss_pred             hhhcceeecccC---------------CCccceEEcccccccccccCCCCc------------cccccccCCCccccchh
Q 016850          196 MQSSSIIVSEEN---------------AGSLCAKICHFGTAELCGEVSGNE------------SGKVNKIEGTRGYMAPE  248 (381)
Q Consensus       196 l~~~Nill~~~~---------------~~~~~~kl~DFG~a~~~~~~~~~~------------~~~~~~~~gt~~y~aPE  248 (381)
                      |||+|||++..+               ..+..+||+|||+++.........            ........||+.|||||
T Consensus       106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE  185 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE  185 (793)
T ss_pred             CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence            789999985421               112557888999887532100000            00112246899999999


Q ss_pred             hhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHH
Q 016850          249 FQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEK  328 (381)
Q Consensus       249 ~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (381)
                      ++.+..|+.++|||||||++|||++|.+|+....          ........          ....+.     .....+.
T Consensus       186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----------~~~~~~~~----------~~~~~~-----~~~~~~~  240 (793)
T PLN00181        186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----------RTMSSLRH----------RVLPPQ-----ILLNWPK  240 (793)
T ss_pred             hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----------HHHHHHHH----------hhcChh-----hhhcCHH
Confidence            9999999999999999999999999988764210          00000000          001110     1112345


Q ss_pred             HHHHHHHhhccCCCCCCChHHHHH
Q 016850          329 MVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       329 l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+++.+||+.||.+||++.|+++
T Consensus       241 ~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        241 EASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHHHHhCCCChhhCcChHHHhh
Confidence            678899999999999999999975

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.80  E-value=4.9e-21  Score=189.49  Aligned_cols=235  Identities=14%  Similarity=0.122  Sum_probs=162.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc--ccccH----HHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR--RSLDL----EQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~--~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ...+|.|++|.|+.....  ......|..+.+  .....    ..+..|+-+-..|.|||++..+..+.+.....-+|||
T Consensus       323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~  402 (601)
T KOG0590|consen  323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEY  402 (601)
T ss_pred             cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhc
Confidence            456799999988777653  333333332211  11111    1256677788889999998888877776665566999


Q ss_pred             cCCCCHHHHhcCCCCCC-------ccchH----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPS-------FTVLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~-------~~~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      |++ +|+.++.....+.       ++++.          ..+++++++|+++...    +.+||+|||.+..+.......
T Consensus       403 ~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~----g~lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  403 CPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTEN----GILKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             ccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecC----CceEEeecCcceeeccCcchh
Confidence            998 9999998753222       22333          2455778999999987    569999999998876544444


Q ss_pred             cccccccCCCccccchhhhcCCCCCc-chhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQ-KCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .......+|+-.|+|||++.+..|++ ..||||.||+++.|++|+.||..........           ....     ..
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-----------~~~~-----~~  541 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-----------KTNN-----YS  541 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-----------hhhc-----cc
Confidence            46667899999999999999999975 6999999999999999999998654432210           0000     00


Q ss_pred             hhhcccc-cCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRL-KDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....... ........+...+.+|.+||+.||.+|.|+++|++
T Consensus       542 ~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  542 DQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            0000000 00112345667899999999999999999999975

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.9e-20  Score=177.78  Aligned_cols=225  Identities=19%  Similarity=0.221  Sum_probs=176.7

Q ss_pred             cccCCCceEEEEE-----ECCceEEEEEecccccc--cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCC
Q 016850          100 FTSSSASASWRGT-----IRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus       100 lg~G~~g~V~~~~-----~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +|+|+||.|++++     ..+.-+++|+.+.....  .......|..++..++ ||.+|+++-.+..+..++++++|..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            7999999998754     23667777765443322  1224556788888886 99999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCC-----------------ccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPS-----------------FTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~-----------------~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|...+.......                 .+....+.+++|++||+++.+    +++++.|||+++..-.        
T Consensus        82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~----Ghi~~tdfglske~v~--------  149 (612)
T KOG0603|consen   82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE----GHIKLTDFGLSKEAVK--------  149 (612)
T ss_pred             chhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc----CccccCCchhhhHhHh--------
Confidence            99999988765443                 233456677899999999998    6799999999987422        


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....|||..|||||++.  ....++|.||||++.+||+||.-||..               +.           ...+. 
T Consensus       150 ~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---------------~~-----------~~~Il-  200 (612)
T KOG0603|consen  150 EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---------------DT-----------MKRIL-  200 (612)
T ss_pred             hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---------------HH-----------HHHHh-
Confidence            11128999999999987  667899999999999999999999853               00           00111 


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHHHHHHHHHHHhhhhhh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~~~~~~~~~~  366 (381)
                       .....+|...+..+.+++.+++..+|..|.-.  ..+.+.++.-+++..+|..
T Consensus       201 -~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~  253 (612)
T KOG0603|consen  201 -KAELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNE  253 (612)
T ss_pred             -hhccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhh
Confidence             11234677889999999999999999999865  7889999999999999993

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.79  E-value=4.4e-18  Score=158.31  Aligned_cols=259  Identities=17%  Similarity=0.163  Sum_probs=176.1

Q ss_pred             cccccccCCCceEEEEEECCc---eEEEEEecccccccHHHHHHHHHHHhhcCC----CCcceEEEEE-EeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIRGK---DVIIFQRKLRRSLDLEQLRERLSVICRSHH----SSLIKLLGAC-VSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~---~v~vk~~~~~~~~~~~~~~~E~~il~~l~h----~nIv~l~~~~-~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.....   .+|+|............+..|+.++..+..    .++..+++.. ......+|||+
T Consensus        22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~  101 (322)
T KOG1164|consen   22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS  101 (322)
T ss_pred             EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence            567899999999999998643   577777655433333378899999999973    6999999998 47778899999


Q ss_pred             ccCCCCHHHHhcCCC--CCCcc-----------------chHHHHHHhhhcceeecccC-CCccceEEcccccccccc--
Q 016850          168 HVSGANLADCLRNPR--NPSFT-----------------VLSTWLSRMQSSSIIVSEEN-AGSLCAKICHFGTAELCG--  225 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~--~~~~~-----------------~~~~~~~~l~~~Nill~~~~-~~~~~~kl~DFG~a~~~~--  225 (381)
                      .+ |.+|.++.....  .+...                 ....+|+||||+|+++.... .....+.|.|||+++...  
T Consensus       102 l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~  180 (322)
T KOG1164|consen  102 LL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYV  180 (322)
T ss_pred             cc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccccc
Confidence            99 899999886543  22211                 12234567788888887653 112469999999998332  


Q ss_pred             cCCCC--c-ccc-ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          226 EVSGN--E-SGK-VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       226 ~~~~~--~-~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      .....  . ... .....||..|+++....+...+.+-|+||++-++.|++.|..||........        .......
T Consensus       181 ~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~--------~~~~~~~  252 (322)
T KOG1164|consen  181 GDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL--------KSKFEKD  252 (322)
T ss_pred             CCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch--------HHHHHHH
Confidence            11111  1 111 2345699999999999999999999999999999999999999854332110        1110000


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCcceeEe
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSVS  377 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~~~  377 (381)
                      .           ............+..+.++...+-..+...+|....+.+.|++.+...   ....+.|.||...
T Consensus       253 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~---~~~~~~~~dw~~~  314 (322)
T KOG1164|consen  253 P-----------RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE---GSKEDSPFDWEVK  314 (322)
T ss_pred             h-----------hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc---CCCCCCCCccccc
Confidence            0           000000011223456667777777789999999999999999988875   2223355555543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=5e-19  Score=164.79  Aligned_cols=158  Identities=13%  Similarity=0.118  Sum_probs=106.8

Q ss_pred             cccccccCCCceEEEEEEC---CceEEEEEeccc-----ccccHHHHHHHHHHHhhcCCCCcce-EEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR---GKDVIIFQRKLR-----RSLDLEQLRERLSVICRSHHSSLIK-LLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~-l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||+||+|++.   ++.+|||++...     .....+.+.+|+++|++|+|+|||. ++++    +..||||
T Consensus        22 ~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVm   97 (365)
T PRK09188         22 ETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVR   97 (365)
T ss_pred             EccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEE
Confidence            4567999999999999874   556688775432     1123566899999999999999985 5432    4579999


Q ss_pred             eccCCCCHHHHhcCCCCC-CccchH----------HHHHHh-hhcceeecccCCCccceEEcccccccccccCCCCcc--
Q 016850          167 EHVSGANLADCLRNPRNP-SFTVLS----------TWLSRM-QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES--  232 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~-~~~~~~----------~~~~~l-~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~--  232 (381)
                      |||+|++|... ...... -..++.          .+|+|| ||+|||++.+    ..+||+|||+++.+........  
T Consensus        98 E~~~G~~L~~~-~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~----~~ikLiDFGlA~~~~~~~~~~~~~  172 (365)
T PRK09188         98 GWTEGVPLHLA-RPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPD----GEAAVIDFQLASVFRRRGALYRIA  172 (365)
T ss_pred             EccCCCCHHHh-CccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCC----CCEEEEECccceecccCcchhhhh
Confidence            99999999743 211111 111111          234578 7999998765    4599999999997654221111  


Q ss_pred             --ccccccCCCccccchhhhcCCC------CCcchhHH
Q 016850          233 --GKVNKIEGTRGYMAPEFQASGV------VTQKCDVY  262 (381)
Q Consensus       233 --~~~~~~~gt~~y~aPE~~~~~~------~~~~sDIw  262 (381)
                        ....+..+++.|+|||++.-..      .+..+|-|
T Consensus       173 ~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        173 AYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             hhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence              1224678899999999875322      23446666

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.77  E-value=5e-17  Score=150.23  Aligned_cols=242  Identities=20%  Similarity=0.250  Sum_probs=168.7

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccc---cHHHHHHHHHHHhhcCCC-CcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHS-SLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||.|+||.||++... ..+++|........   ....+.+|+.++..+.|+ +|+++++++......+++++|+.++
T Consensus         5 ~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~   83 (384)
T COG0515           5 LRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGG   83 (384)
T ss_pred             EEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCC
Confidence            457899999999999988 77788876554443   367899999999999988 7999999998777789999999999


Q ss_pred             CHHHHhcCCC---CCCccch-----------------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          173 NLADCLRNPR---NPSFTVL-----------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       173 sL~~~l~~~~---~~~~~~~-----------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|.+++....   .......                 ...|++++|+||+++...   ..++++|||+++.+........
T Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~---~~~~l~dfg~~~~~~~~~~~~~  160 (384)
T COG0515          84 SLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG---RVVKLIDFGLAKLLPDPGSTSS  160 (384)
T ss_pred             cHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC---CeEEEeccCcceecCCCCcccc
Confidence            9998877653   2221111                 123557779999998863   1599999999985432211111


Q ss_pred             --ccccccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          233 --GKVNKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       233 --~~~~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                        .......|+..|+|||.+.+   ..+....|+||+|++++++++|..||......        .........+.....
T Consensus       161 ~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~--------~~~~~~~~~~~~~~~  232 (384)
T COG0515         161 IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS--------SATSQTLKIILELPT  232 (384)
T ss_pred             ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc--------ccHHHHHHHHHhcCC
Confidence              13467889999999999887   57889999999999999999999997543221        001111111110000


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHH
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGL  353 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~  353 (381)
                      .   .................+.+++..|+..+|..|.++.+....
T Consensus       233 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         233 P---SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             c---ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0   000000000002234678999999999999999998887664

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.76  E-value=2.3e-19  Score=167.35  Aligned_cols=159  Identities=21%  Similarity=0.266  Sum_probs=108.2

Q ss_pred             eeeEEEeccCCCCHHHHhcCCCCCC----------ccc-------hHHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          161 CGYLVYEHVSGANLADCLRNPRNPS----------FTV-------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~-------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++||.|++|...+|.+||..++...          +.+       -..++++++|.||+..++    ..+||.|||+...
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~d----~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSDD----DQLKIGDFGLVTS  405 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhhccchhhhccccccccccc----hhhhhhhhhheee
Confidence            5789999999999999997543221          111       123478899999999888    4599999999876


Q ss_pred             cccCC--CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHH
Q 016850          224 CGEVS--GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       224 ~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      .....  .......+..+||..||+||.+.+..|+.++||||||++|+|++. -...|.-.                   
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-------------------  466 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-------------------  466 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-------------------
Confidence            43211  111235577889999999999999999999999999999999997 22222110                   


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                            +.+..+-+..+.+.+..+ -++-.+|+.+++...|.+||++.+
T Consensus       467 ------~t~~d~r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  467 ------ATLTDIRDGIIPPEFLQD-YPEEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             ------HhhhhhhcCCCChHHhhc-CcHHHHHHHHhcCCCcccCchHHH
Confidence                  111111111121111111 234568999999999999994433

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.74  E-value=6.4e-18  Score=160.39  Aligned_cols=202  Identities=24%  Similarity=0.344  Sum_probs=137.8

Q ss_pred             HhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCC-CCc-------cchHHHHHH-----------hhhcce
Q 016850          141 ICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRN-PSF-------TVLSTWLSR-----------MQSSSI  201 (381)
Q Consensus       141 l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~-------~~~~~~~~~-----------l~~~Ni  201 (381)
                      |+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+..... ...       +.+...+.+           +++.|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            4678999999999999999999999999999999999987432 111       111122223           347888


Q ss_pred             eecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCC---C----CCcchhHHHHHHHHHHHHhC
Q 016850          202 IVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG---V----VTQKCDVYAFGVVVLELLSG  274 (381)
Q Consensus       202 ll~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~----~~~~sDIwSlGvil~elltg  274 (381)
                      +++..    +++||+|||+......  ...........-...|.|||.+...   .    .+.+.||||||++++|+++.
T Consensus        81 lvd~~----w~lklt~~Gl~~~~~~--~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r  154 (484)
T KOG1023|consen   81 LVDSR----WVLKLTDFGLNSLLEE--TAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR  154 (484)
T ss_pred             eeeee----EEEEechhhhcccccc--cccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence            88886    8999999999876532  1111222223346789999988753   1    46779999999999999999


Q ss_pred             CccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          275 EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       275 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                      ..||.........    ..+...+..   ++..    .+.+.+...  ....+.+..++.+||..+|.+||++++|-..+
T Consensus       155 ~~~~~~~~~~~~~----~eii~~~~~---~~~~----~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~  221 (484)
T KOG1023|consen  155 SGPFDLRNLVEDP----DEIILRVKK---GGSN----PFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKL  221 (484)
T ss_pred             cCccccccccCCh----HHHHHHHHh---cCCC----CcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhh
Confidence            9999753322111    111111111   0110    111111110  13445799999999999999999999999999


Q ss_pred             HHHHHHh
Q 016850          355 SKMYLES  361 (381)
Q Consensus       355 ~~~~~~~  361 (381)
                      +.+....
T Consensus       222 ~~~~~~~  228 (484)
T KOG1023|consen  222 LTINKGG  228 (484)
T ss_pred             hhhcccc
Confidence            8887654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.70  E-value=5.6e-18  Score=147.04  Aligned_cols=155  Identities=11%  Similarity=0.030  Sum_probs=110.5

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHH---------HHHHHHHHhhcCCCCcceEEEEEEeC--------
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQ---------LRERLSVICRSHHSSLIKLLGACVSG--------  159 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~---------~~~E~~il~~l~h~nIv~l~~~~~~~--------  159 (381)
                      .+.||+|+||.||+....++.+|+|............         +.+|++.+.+|.|++|..+.+++.+.        
T Consensus        36 ~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~  115 (232)
T PRK10359         36 IKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYA  115 (232)
T ss_pred             EEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccccc
Confidence            4567999999999987778899999976544332222         68899999999999999999987643        


Q ss_pred             CeeeEEEeccCCCCHHHHhcCCCCCCccch----------HHHHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          160 NCGYLVYEHVSGANLADCLRNPRNPSFTVL----------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~----------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +..+|||||++|.+|.++...... ...++          ..+|.|+||+||+++++    + ++|+|||.......   
T Consensus       116 ~~~~lvmEyi~G~tL~~~~~~~~~-~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~----g-i~liDfg~~~~~~e---  186 (232)
T PRK10359        116 HTYIMLIEYIEGVELNDMPEISED-VKAKIKASIESLHQHGMVSGDPHKGNFIVSKN----G-LRIIDLSGKRCTAQ---  186 (232)
T ss_pred             CCeEEEEEEECCccHHHhhhccHH-HHHHHHHHHHHHHHcCCccCCCChHHEEEeCC----C-EEEEECCCcccccc---
Confidence            357899999999999887432110 01111          22345788999999875    4 99999998765311   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS  273 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt  273 (381)
                       .. .           ...++....|+.++|||+||+++..+..
T Consensus       187 -~~-a-----------~d~~vler~y~~~~di~~lg~~~~~~~~  217 (232)
T PRK10359        187 -RK-A-----------KDRIDLERHYGIKNEIKDLGYYLLIYKK  217 (232)
T ss_pred             -hh-h-----------HHHHHHHhHhcccccccceeEeehHHHH
Confidence             00 0           0113444557789999999999887654

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.70  E-value=8.2e-18  Score=168.00  Aligned_cols=231  Identities=18%  Similarity=0.181  Sum_probs=155.6

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccc-cHHHHHHHHHH--HhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL-DLEQLRERLSV--ICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~-~~~~~~~E~~i--l~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||.+.|=+|.+|+++.+.|+||++..+.+. ....+.++++-  ...++|||++.+.-+...+.-.|||-+|. ..+
T Consensus        28 ~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv-khn  106 (1431)
T KOG1240|consen   28 VENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV-KHN  106 (1431)
T ss_pred             ecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH-hhh
Confidence            567999999999999999888999998776644 44444443333  44459999999988877788889999999 579


Q ss_pred             HHHHhcCCCCCCcc-------chHH----------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc---
Q 016850          174 LADCLRNPRNPSFT-------VLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG---  233 (381)
Q Consensus       174 L~~~l~~~~~~~~~-------~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~---  233 (381)
                      |.|.|..+.-+...       |++.          .|.|||.+|||+..-|.    +.|+||.--+..-.+..+...   
T Consensus       107 LyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW----~~LtDFAsFKPtYLPeDNPadf~f  182 (1431)
T KOG1240|consen  107 LYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNW----LYLTDFASFKPTYLPEDNPADFTF  182 (1431)
T ss_pred             hhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeech----hhhhcccccCCccCCCCCcccceE
Confidence            99999876533211       1111          23367889999998876    899999876543222211111   


Q ss_pred             cccccCCCccccchhhhcCC----------C-CCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHH
Q 016850          234 KVNKIEGTRGYMAPEFQASG----------V-VTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      -..+......|+|||.+...          . .+++.||||+||+++||++ |+++|..              .+.. ..
T Consensus       183 FFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--------------SQL~-aY  247 (1431)
T KOG1240|consen  183 FFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--------------SQLL-AY  247 (1431)
T ss_pred             EEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------------HHHH-hH
Confidence            11233345689999976431          1 5789999999999999988 6888852              1111 11


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      -.++ ....+.+-..+       ....+++|+..|++.||.+|.+|++.|+.-+
T Consensus       248 r~~~-~~~~e~~Le~I-------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yr  293 (1431)
T KOG1240|consen  248 RSGN-ADDPEQLLEKI-------EDVSLRNLILSMIQRDPSKRLSAEDYLQKYR  293 (1431)
T ss_pred             hccC-ccCHHHHHHhC-------cCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence            1110 00011110111       1236899999999999999999999998733

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.67  E-value=1e-15  Score=135.08  Aligned_cols=242  Identities=15%  Similarity=0.143  Sum_probs=172.1

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+++||+|+||+.+.|+.  ++..||||..-.+  ....++..|....+.| ..++|..+|-+-..+-+-.||||++ |-
T Consensus        32 VGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GP  108 (449)
T KOG1165|consen   32 VGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GP  108 (449)
T ss_pred             eccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-Cc
Confidence            478999999999999986  6999999975333  3346788888888887 5789999998888888889999999 88


Q ss_pred             CHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCC-CccceEEcccccccccccCCCCcc-
Q 016850          173 NLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENA-GSLCAKICHFGTAELCGEVSGNES-  232 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~-~~~~~kl~DFG~a~~~~~~~~~~~-  232 (381)
                      +|.|++.-. +.+..+.++.+                 .+||||+|.|+..-+. ....|-|+|||+|+...++..... 
T Consensus       109 SLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHI  188 (449)
T KOG1165|consen  109 SLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHI  188 (449)
T ss_pred             CHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccC
Confidence            999887643 23433332221                 2367788888865432 224589999999998765544332 


Q ss_pred             --ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          233 --GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       233 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                        .......||..||+--...+..-+..-|+=|||-++++++-|..||.........                   ..+.
T Consensus       189 PYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-------------------~kYe  249 (449)
T KOG1165|consen  189 PYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-------------------EKYE  249 (449)
T ss_pred             ccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH-------------------HHHH
Confidence              2345677999999999888888999999999999999999999999865442110                   0111


Q ss_pred             hhhcccccC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          311 KWVDRRLKD---SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       311 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      ++-+.....   ..-..++.++...+.-.-..+-.+-|..+-+...+.+++.
T Consensus       250 KIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld  301 (449)
T KOG1165|consen  250 KIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD  301 (449)
T ss_pred             HhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence            111111000   0012345567777777777788888988887777777754

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.66  E-value=6.7e-16  Score=130.59  Aligned_cols=257  Identities=13%  Similarity=0.113  Sum_probs=175.6

Q ss_pred             eeHHHHHHHhcCCcccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCC-CCcceEEEEEEeC
Q 016850           83 YHLSEICAATNNFLAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHH-SSLIKLLGACVSG  159 (381)
Q Consensus        83 ~~~~~~~~~~~~f~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~  159 (381)
                      .+..++..+.++-..++||.|+||.+|.|..  .|.+||||......  ...++..|.++.+.|++ ..|..+..+..+.
T Consensus         6 ~s~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~   83 (341)
T KOG1163|consen    6 GSLEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEK   83 (341)
T ss_pred             cchhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcccc
Confidence            3455666666666778999999999999987  58999999854433  33578889999999964 6777788888888


Q ss_pred             CeeeEEEeccCCCCHHHHhcCC-CCCCccchH-----------------HHHHHhhhcceeecccCCCccceEEcccccc
Q 016850          160 NCGYLVYEHVSGANLADCLRNP-RNPSFTVLS-----------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTA  221 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~-----------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a  221 (381)
                      ..-.+||+++ |.+|.+++.-. +.+....++                 .+|+||||.|.|..-+. ....+.|+|||+|
T Consensus        84 ~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgr-h~~kl~LIDFGLa  161 (341)
T KOG1163|consen   84 DYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGR-HCNKLYLIDFGLA  161 (341)
T ss_pred             ccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecccc-ccceEEEEeccch
Confidence            8899999999 89999987642 233322221                 24456677777765421 2235899999999


Q ss_pred             cccccCCCCcc---ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHH
Q 016850          222 ELCGEVSGNES---GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKA  298 (381)
Q Consensus       222 ~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~  298 (381)
                      +.+.+......   .......||..|.+--...+..-+..-|+=|+|-++.++--|..||+......        ..+..
T Consensus       162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t--------k~QKy  233 (341)
T KOG1163|consen  162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT--------KKQKY  233 (341)
T ss_pred             hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh--------HHHHH
Confidence            98654333222   22356779999999887777777889999999999999999999998654421        11111


Q ss_pred             HHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          299 SEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      ..+.........+.+..        ..+.++.-.+.-|-..--++-|...-+.+.++-++.
T Consensus       234 EkI~EkK~s~~ie~LC~--------G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr  286 (341)
T KOG1163|consen  234 EKISEKKMSTPIEVLCK--------GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR  286 (341)
T ss_pred             HHHHHhhcCCCHHHHhC--------CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence            11111000111111111        234567778888888888889988877777665543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1e-15  Score=138.17  Aligned_cols=204  Identities=15%  Similarity=0.169  Sum_probs=140.8

Q ss_pred             CCCCcceEEEEEEe---------------------------CCeeeEEEeccCCCCHHHHhcCCCCCCc-----------
Q 016850          145 HHSSLIKLLGACVS---------------------------GNCGYLVYEHVSGANLADCLRNPRNPSF-----------  186 (381)
Q Consensus       145 ~h~nIv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~-----------  186 (381)
                      +|||||++.++|.+                           ...+|+||...+ .+|.++|-.+.....           
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE  352 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE  352 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH
Confidence            69999999998843                           346899999995 799999976543321           


Q ss_pred             -----cchHHHHHHhhhcceeecccCCCccceEEccccccccccc--CCCCccccccccCCCccccchhhhcCC-----C
Q 016850          187 -----TVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGE--VSGNESGKVNKIEGTRGYMAPEFQASG-----V  254 (381)
Q Consensus       187 -----~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~  254 (381)
                           .+....++|||+.|||+.-++.+-..+.|+|||++.....  .........-..-|...-||||+....     .
T Consensus       353 av~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~av  432 (598)
T KOG4158|consen  353 AVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAV  432 (598)
T ss_pred             HHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCcee
Confidence                 1122356789999999865544446789999998754211  000111122345588899999987632     2


Q ss_pred             CC-cchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHH
Q 016850          255 VT-QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG  333 (381)
Q Consensus       255 ~~-~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  333 (381)
                      .+ .++|.|+.|.+.||++....||....+...         +            . .-+.....+..|..+++.+.+|+
T Consensus       433 vny~kAD~WA~GalaYEIfg~~NPFY~rGem~L---------~------------~-r~Yqe~qLPalp~~vpp~~rqlV  490 (598)
T KOG4158|consen  433 VNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL---------D------------T-RTYQESQLPALPSRVPPVARQLV  490 (598)
T ss_pred             eccchhhhhhhhhhHHHHhccCCcccccchhee---------c------------h-hhhhhhhCCCCcccCChHHHHHH
Confidence            33 479999999999999999999975221110         0            0 00222334556778889999999


Q ss_pred             HHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCC
Q 016850          334 LQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFP  371 (381)
Q Consensus       334 ~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~  371 (381)
                      ...|+.||.+|++..-..+.|+=.+-...+|--.+..+
T Consensus       491 ~~lL~r~pskRvsp~iAANvl~LsLw~~~~~vka~~~~  528 (598)
T KOG4158|consen  491 FDLLKRDPSKRVSPNIAANVLNLSLWRMGEDVKAMMEK  528 (598)
T ss_pred             HHHhcCCccccCCccHHHhHHHHHHhcCchHHHHhccc
Confidence            99999999999999988888886666556665544443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.62  E-value=1.1e-16  Score=159.66  Aligned_cols=217  Identities=12%  Similarity=0.146  Sum_probs=142.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.+-.|+||.||..+++  .+++|+|+ ..+..     +.|-  +|.....|.+|                     ||=
T Consensus        88 IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv---------------------gDc  138 (1205)
T KOG0606|consen   88 IKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV---------------------GDC  138 (1205)
T ss_pred             eEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee---------------------chh
Confidence            345679999999999987  67788732 22111     1110  44444555555                     333


Q ss_pred             HHHhcCCCCCCccc---------hHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCC-----------cccc
Q 016850          175 ADCLRNPRNPSFTV---------LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN-----------ESGK  234 (381)
Q Consensus       175 ~~~l~~~~~~~~~~---------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~-----------~~~~  234 (381)
                      ...++..+.++...         ..+.+++++|.|.++...    +++|++|||+++........           ..-.
T Consensus       139 ~tllk~~g~lPvdmvla~Eylh~ygivhrdlkpdnllIT~m----GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~  214 (1205)
T KOG0606|consen  139 ATLLKNIGPLPVDMVLAVEYLHSYGIVHRDLKPDNLLITSM----GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQ  214 (1205)
T ss_pred             hhhcccCCCCcchhhHHhHhhccCCeecCCCCCCcceeeec----ccccccchhhhhhhhhhccchhhhcchHHHHHHhh
Confidence            33333322222221         124567889999999998    66999999998753211000           0111


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+||+.|+|||++....|+..+|.|++|+|+||.+.|+.||.....+        .++..+   +.    ....|. 
T Consensus       215 dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe--------elfg~v---is----d~i~wp-  278 (1205)
T KOG0606|consen  215 DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELFGQV---IS----DDIEWP-  278 (1205)
T ss_pred             hccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH--------HHHhhh---hh----hhcccc-
Confidence            24568999999999999999999999999999999999999999643221        111111   10    001111 


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                           +-.....+++.+++.++|+.+|..|--....++.-++=+.+..+|..+
T Consensus       279 -----E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~l  326 (1205)
T KOG0606|consen  279 -----EEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSL  326 (1205)
T ss_pred             -----ccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchh
Confidence                 112334578999999999999999987668888888888888888743

>PRK10345 hypothetical protein; Provisional

Probab=99.62  E-value=1.4e-15  Score=131.59  Aligned_cols=123  Identities=9%  Similarity=0.064  Sum_probs=88.9

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc-----CCCCcceEEEEEEeCC---e-eeEEEe
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS-----HHSSLIKLLGACVSGN---C-GYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~l~~~~~~~~---~-~~lv~e  167 (381)
                      ...||+|+||.||... .....+||+.........+.+.+|+.+++.|     .||||+++||+++++.   . +.+|||
T Consensus         7 ~~~LG~G~~~~Vy~hp-~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e   85 (210)
T PRK10345          7 QSPLGTGRHRKCYAHP-EDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD   85 (210)
T ss_pred             cceecCCCceEEEECC-CCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence            4678999999999622 2333468877655444567899999999999     5799999999999863   4 347899


Q ss_pred             c--cCCCCHHHHhcCCCCCCcc-----chH-----------HHHHHhhhcceeecccCCCccceEEcccccc
Q 016850          168 H--VSGANLADCLRNPRNPSFT-----VLS-----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTA  221 (381)
Q Consensus       168 ~--~~~gsL~~~l~~~~~~~~~-----~~~-----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a  221 (381)
                      |  +++|+|.+++.+.. ..+.     +++           .+++||+|+|||++..+.++..++|+||+.+
T Consensus        86 ~~G~~~~tL~~~l~~~~-~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         86 FDGKPSITLTEFAEQCR-YEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             CCCCcchhHHHHHHccc-ccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            9  66799999997643 2221     111           1234678999999865544568999995533

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.59  E-value=7.6e-15  Score=124.96  Aligned_cols=176  Identities=10%  Similarity=-0.049  Sum_probs=119.9

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccc----cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL----DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~----~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ...|++|+||+||.+...+.+++.+.+......    ....+.+|+++|++|. |++|++++++    +..+++|||++|
T Consensus         7 ~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G   82 (218)
T PRK12274          7 NEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAG   82 (218)
T ss_pred             ceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecC
Confidence            456899999999988888888877664333221    1225789999999994 5889999986    346899999999


Q ss_pred             CCHHHHhcCCCCCCccchH----------HHHHHh-hhcceeecccCCCccceEEcccccccccccCCCC----c-cc--
Q 016850          172 ANLADCLRNPRNPSFTVLS----------TWLSRM-QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN----E-SG--  233 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~----------~~~~~l-~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~----~-~~--  233 (381)
                      .+|.+.+.........++.          .+|+|| +|.|||++.+    +.++|+|||++.........    . ..  
T Consensus        83 ~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~----g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~  158 (218)
T PRK12274         83 AAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQED----GSPAVIDFQLAVRGNPRARWMRLLAREDLR  158 (218)
T ss_pred             ccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCC----CCEEEEECCCceecCCcchHHHHHHHHHHH
Confidence            9998765332111111222          234577 5889999765    45999999999864321110    0 00  


Q ss_pred             --cccccCCCccccchhhhcCC-CCC-cchhHHHHHHHHHHHHhCCccccc
Q 016850          234 --KVNKIEGTRGYMAPEFQASG-VVT-QKCDVYAFGVVVLELLSGEEVLKF  280 (381)
Q Consensus       234 --~~~~~~gt~~y~aPE~~~~~-~~~-~~sDIwSlGvil~elltg~~pf~~  280 (381)
                        .......++.|++|+...-. ..+ ...+.++.|.-+|.++|+..++..
T Consensus       159 ~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        159 HLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence              01123368889999854321 333 567888999999999999988753

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=1.6e-14  Score=146.80  Aligned_cols=230  Identities=17%  Similarity=0.141  Sum_probs=148.6

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEeccccccc---HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLD---LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~---~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ...||+|+||+||+|... ++.||+|+-+......   ..+++..++ ++.  -+-|..+...+.-.+.-+||+||.+.|
T Consensus       703 ~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~~--~~~~~~~~~a~~~~~~S~lv~ey~~~G  779 (974)
T KOG1166|consen  703 SKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-PQM--LPSIMHISSAHVFQNASVLVSEYSPYG  779 (974)
T ss_pred             EeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-hhh--hcchHHHHHHHccCCcceeeeeccccc
Confidence            356899999999999985 7888888866554431   233333322 111  234445555445566678999999999


Q ss_pred             CHHHHhcCCCCCCccc-----------------hHHHHHHhhhcceeecccC---CCccceEEcccccccccccCCCCcc
Q 016850          173 NLADCLRNPRNPSFTV-----------------LSTWLSRMQSSSIIVSEEN---AGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~-----------------~~~~~~~l~~~Nill~~~~---~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|.+++...+.+.+..                 ..++|.||||.|.||...-   .++..++|+|||.+-......  ..
T Consensus       780 tlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp--~~  857 (974)
T KOG1166|consen  780 TLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFP--DG  857 (974)
T ss_pred             cHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcC--CC
Confidence            9999999776655332                 2234456667777665321   134569999999986543222  12


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......++|-.+-.+|+..|..|++.+|.|.|+.+++.|+.|++.= .                     . +  +.. ..
T Consensus       858 ~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-~---------------------~-~--g~~-~~  911 (974)
T KOG1166|consen  858 TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-V---------------------K-N--GSS-WM  911 (974)
T ss_pred             cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-h---------------------c-C--Ccc-ee
Confidence            3556778999999999999999999999999999999999997541 0                     0 0  000 00


Q ss_pred             hcccccCCCCHHHHHH-HHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          313 VDRRLKDSYPVEVAEK-MVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~-l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ++..    ++...-.+ ..+++..+|..|-..=|...++...|++.+.+-
T Consensus       912 ~~~~----~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~  957 (974)
T KOG1166|consen  912 VKTN----FPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH  957 (974)
T ss_pred             cccc----chhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence            1111    12122222 234555666655555588888888888877653

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.55  E-value=2.8e-14  Score=127.72  Aligned_cols=208  Identities=14%  Similarity=0.190  Sum_probs=124.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcC----------CCCcceEEEEEE----
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSH----------HSSLIKLLGACV----  157 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~----------h~nIv~l~~~~~----  157 (381)
                      +..||.|+++.||.+++.  ++++++|+.......   ..+++.+|.-....+.          |-.++.-++...    
T Consensus        17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~   96 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK   96 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred             ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence            467899999999999996  699999987665533   4667777765554432          222333333322    


Q ss_pred             -----eC---C-----eeeEEEeccCCCCHHHHhcC---CCCCCcc-----------chHHH----------HHHhhhcc
Q 016850          158 -----SG---N-----CGYLVYEHVSGANLADCLRN---PRNPSFT-----------VLSTW----------LSRMQSSS  200 (381)
Q Consensus       158 -----~~---~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~-----------~~~~~----------~~~l~~~N  200 (381)
                           ..   .     ..+++|+-+ .+||.+++..   .......           |+...          |.+|+|+|
T Consensus        97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~n  175 (288)
T PF14531_consen   97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPEN  175 (288)
T ss_dssp             -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGG
T ss_pred             CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceee
Confidence                 11   1     247788888 5899888652   1111100           01111          12567999


Q ss_pred             eeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcC--------CCCCcchhHHHHHHHHHHHH
Q 016850          201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS--------GVVTQKCDVYAFGVVVLELL  272 (381)
Q Consensus       201 ill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDIwSlGvil~ell  272 (381)
                      ++++.+    +.++|+||+.....+.     .  ......+..|.+||....        -.++.+.|.|+||+++|.|+
T Consensus       176 fll~~~----G~v~Lg~F~~~~r~g~-----~--~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW  244 (288)
T PF14531_consen  176 FLLDQD----GGVFLGDFSSLVRAGT-----R--YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW  244 (288)
T ss_dssp             EEE-TT----S-EEE--GGGEEETTE-----E--EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred             EEEcCC----CCEEEcChHHHeecCc-----e--eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence            999998    5699999998765322     1  111345578999997643        24789999999999999999


Q ss_pred             hCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 016850          273 SGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR  344 (381)
Q Consensus       273 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  344 (381)
                      +++.||...........                          .+ ..+. ++++.++.||.++|+.||.+|
T Consensus       245 C~~lPf~~~~~~~~~~~--------------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  245 CGRLPFGLSSPEADPEW--------------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HSS-STCCCGGGSTSGG--------------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HccCCCCCCCccccccc--------------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            99999975433221110                          11 1234 678899999999999999988

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.54  E-value=1.8e-14  Score=123.27  Aligned_cols=121  Identities=10%  Similarity=-0.011  Sum_probs=81.7

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccc--c-------H-----------------HHHHHHHHHHhhcCCCCc
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--D-------L-----------------EQLRERLSVICRSHHSSL  149 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--~-------~-----------------~~~~~E~~il~~l~h~nI  149 (381)
                      ...||+|+||.||+|... |+.||+|+.+.....  .       .                 ....+|+++|.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            357999999999999985 889999987653211  1       1                 122359999999988877


Q ss_pred             ceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCCCccch------------------HHHHHHhhhcceeecccCCCcc
Q 016850          150 IKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL------------------STWLSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       150 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~------------------~~~~~~l~~~Nill~~~~~~~~  211 (381)
                      .....+... + .+|||||+++++|...+......+...+                  ..+|+||||+||++++     .
T Consensus        82 ~~p~~~~~~-~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-----~  154 (190)
T cd05147          82 PCPEPILLK-S-HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-----G  154 (190)
T ss_pred             CCCcEEEec-C-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-----C
Confidence            544433222 2 3899999988777655333333332211                  2334577899999984     3


Q ss_pred             ceEEccccccccc
Q 016850          212 CAKICHFGTAELC  224 (381)
Q Consensus       212 ~~kl~DFG~a~~~  224 (381)
                      .++|+|||+|...
T Consensus       155 ~v~LiDFG~a~~~  167 (190)
T cd05147         155 KLYIIDVSQSVEH  167 (190)
T ss_pred             cEEEEEccccccC
Confidence            4999999999653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.51  E-value=5.1e-14  Score=120.82  Aligned_cols=120  Identities=8%  Similarity=0.012  Sum_probs=83.3

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccc---------------------c-----HHHHHHHHHHHhhcCCCCc
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL---------------------D-----LEQLRERLSVICRSHHSSL  149 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~---------------------~-----~~~~~~E~~il~~l~h~nI  149 (381)
                      ...||+|+||.||+|.+. |+.||||+.+.....                     .     ...+.+|++.+.++.|++|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            357999999999999985 899999987654211                     0     1224578999999999988


Q ss_pred             ceEEEEEEeCCeeeEEEeccCCCCHHHH-hcCCCCCCccc------------------hHHHHHHhhhcceeecccCCCc
Q 016850          150 IKLLGACVSGNCGYLVYEHVSGANLADC-LRNPRNPSFTV------------------LSTWLSRMQSSSIIVSEENAGS  210 (381)
Q Consensus       150 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~------------------~~~~~~~l~~~Nill~~~~~~~  210 (381)
                      .....+....  .+|||||++++++... +... ..+...                  ...+|+||||+||+++ +    
T Consensus        82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~-~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~----  153 (190)
T cd05145          82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKDV-PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-D----  153 (190)
T ss_pred             CCceEEEecC--CEEEEEEecCCCchhhhhhhc-cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-C----
Confidence            6555443332  4899999988755433 4332 222111                  1234557889999998 3    


Q ss_pred             cceEEccccccccc
Q 016850          211 LCAKICHFGTAELC  224 (381)
Q Consensus       211 ~~~kl~DFG~a~~~  224 (381)
                      ..++|+|||++...
T Consensus       154 ~~~~liDFG~a~~~  167 (190)
T cd05145         154 GKPYIIDVSQAVEL  167 (190)
T ss_pred             CCEEEEEcccceec
Confidence            45999999999764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.48  E-value=1.9e-13  Score=118.18  Aligned_cols=119  Identities=16%  Similarity=0.226  Sum_probs=88.7

Q ss_pred             cccCCCceEEEEEECCceEEEEEecccccc--------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850          100 FTSSSASASWRGTIRGKDVIIFQRKLRRSL--------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus       100 lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ||+|+||.||+|.+.+..+++|+.......        ...++.+|++++..++|+++.....++.+.+..++||||++|
T Consensus         2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g   81 (199)
T TIGR03724         2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEG   81 (199)
T ss_pred             CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECC
Confidence            799999999999999999999986543211        135678899999999988766666666667778999999999


Q ss_pred             CCHHHHhcCCCCCCccchHH----------HHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          172 ANLADCLRNPRNPSFTVLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++|.+++.........++..          .|.|++|.||+++ .    ..++++|||++..
T Consensus        82 ~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~----~~~~liDfg~a~~  138 (199)
T TIGR03724        82 KPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-D----DKLYLIDFGLGKY  138 (199)
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEE-C----CcEEEEECCCCcC
Confidence            99999886643211222222          2346678888887 2    4599999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.46  E-value=3.1e-13  Score=117.96  Aligned_cols=121  Identities=18%  Similarity=0.185  Sum_probs=91.6

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccc--------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      +.||+|++|.||+|.+.+..+++|+.......        ....+.+|+.++..+.|++|+....++.+.+..++||||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            46899999999999999999999976533211        1246788999999999999988888877888889999999


Q ss_pred             CCCCHHHHhcCCCC---CCccchH----------HHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          170 SGANLADCLRNPRN---PSFTVLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       170 ~~gsL~~~l~~~~~---~~~~~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      +|++|.+++.....   ....++.          ..|.|++|.||+++.     ..++|+|||++..
T Consensus        82 ~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~~-----~~~~liDf~~a~~  143 (211)
T PRK14879         82 EGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILSG-----GKIYLIDFGLAEF  143 (211)
T ss_pred             CCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEEC-----CCEEEEECCcccC
Confidence            99999999875432   0011111          223466788988872     4589999998754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=2.3e-12  Score=122.95  Aligned_cols=228  Identities=18%  Similarity=0.218  Sum_probs=154.2

Q ss_pred             cccccc--CCCceEEEEEE--C--CceEEEEEeccccc--ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTS--SSASASWRGTI--R--GKDVIIFQRKLRRS--LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~--G~~g~V~~~~~--~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ...+|.  |.+|.||.+..  .  +..+++|+-+....  .....-.+|+.-.+++ .|+|.|+.+..++..+.+++-+|
T Consensus       119 ~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE  198 (524)
T KOG0601|consen  119 SSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTE  198 (524)
T ss_pred             ccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeec
Confidence            467899  99999999987  3  67788887433322  3444556677777777 59999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC-CCccchH----HHH-----------------HHhhhcceeecccCCCccceEEcccccccccc
Q 016850          168 HVSGANLADCLRNPRN-PSFTVLS----TWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~-~~~~~~~----~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      +| +.+|..+.+.... .+...+.    .+.                 .+++|+||+...+.   ...+++|||+...+.
T Consensus       199 ~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~---~s~~~~df~~v~~i~  274 (524)
T KOG0601|consen  199 LC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDW---TSCKLTDFGLVSKIS  274 (524)
T ss_pred             cc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccc---ceeecCCcceeEEcc
Confidence            99 6899998877543 3222221    222                 23446666666552   458999999998876


Q ss_pred             cCCCCccc-cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          226 EVSGNESG-KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       226 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                      ........ ......|...|++||... +.++...|||++|.++.+..++...+..-..                     
T Consensus       275 ~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~---------------------  332 (524)
T KOG0601|consen  275 DGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN---------------------  332 (524)
T ss_pred             CCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC---------------------
Confidence            53322222 123336888999999764 6779999999999999999998766532110                     


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ..+.+.-...+..++-...+.++...+.+|++.+|..|+++..++.
T Consensus       333 --~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  333 --SSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             --CCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence              0011100111112222233455666999999999999999887753

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.39  E-value=1.1e-12  Score=130.30  Aligned_cols=122  Identities=16%  Similarity=0.207  Sum_probs=92.0

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEeccccc--------ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRS--------LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|.+.+..+++|++..+..        ...+++.+|++++..++|++|+..+.++.+....++||||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~  417 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEY  417 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEe
Confidence            56789999999999999887777766433211        1235688999999999999999988888777788999999


Q ss_pred             cCCCCHHHHhcCCCCC---------CccchHHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          169 VSGANLADCLRNPRNP---------SFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~---------~~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      +++++|.+++......         ..+....+|+||+|+|||+++     ..++|+|||+++.
T Consensus       418 ~~g~~L~~~l~~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~~-----~~~~liDFGla~~  476 (535)
T PRK09605        418 IGGKDLKDVLEGNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVRD-----DRLYLIDFGLGKY  476 (535)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEEC-----CcEEEEeCccccc
Confidence            9999999988521100         011122345678899999943     4599999999875

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.31  E-value=2.9e-13  Score=134.47  Aligned_cols=228  Identities=16%  Similarity=0.192  Sum_probs=160.7

Q ss_pred             cccccCCCceEEEEEEC-C--ceEEEEEecccc--cccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR-G--KDVIIFQRKLRR--SLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~-~--~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+|+.|-..... +  ..+++|.+....  ....+....|..+-..+. |.|++.+++...+.+..+++++|..+
T Consensus        26 ~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g  105 (601)
T KOG0590|consen   26 RSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDG  105 (601)
T ss_pred             ccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccc
Confidence            44899999999877763 3  334444433322  113445556888777786 99999999999999999999999999


Q ss_pred             CCHHHHh-cCCC-CCC-----------------cc-chHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          172 ANLADCL-RNPR-NPS-----------------FT-VLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       172 gsL~~~l-~~~~-~~~-----------------~~-~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      |++.+-+ +... ...                 .+ .....+++++|+|.+++..+   ..++++|||+|..+... .+.
T Consensus       106 ~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~---~~l~~~df~~At~~~~~-~g~  181 (601)
T KOG0590|consen  106 GSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESG---SALKIADFGLATAYRNK-NGA  181 (601)
T ss_pred             cccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCC---CcccCCCchhhcccccc-CCc
Confidence            9999998 4332 111                 11 12234557789999988874   16999999999876431 233


Q ss_pred             cccccccCC-CccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          232 SGKVNKIEG-TRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       232 ~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .......+| ++.|+|||...+. ......|+||.|+++.-+++|..|+........                     ..
T Consensus       182 ~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---------------------~~  240 (601)
T KOG0590|consen  182 ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---------------------RY  240 (601)
T ss_pred             ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---------------------cc
Confidence            344566778 9999999988874 457889999999999999999999875433221                     11


Q ss_pred             hhhhccc--ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHH
Q 016850          310 RKWVDRR--LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV  350 (381)
Q Consensus       310 ~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev  350 (381)
                      ..+....  ..............+++.+++..+|..|.+.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~  283 (601)
T KOG0590|consen  241 SSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEEL  283 (601)
T ss_pred             eeecccccccccCccccCChhhhhcccccccCCchhccccccc
Confidence            1111111  1122234556778899999999999999998887

>smart00090 RIO RIO-like kinase

Probab=99.25  E-value=9.5e-12  Score=110.20  Aligned_cols=120  Identities=11%  Similarity=0.044  Sum_probs=80.0

Q ss_pred             cccccccCCCceEEEEE-E--CCceEEEEEecccccc------------------------cHHHHHHHHHHHhhcCCC-
Q 016850           96 LAKKFTSSSASASWRGT-I--RGKDVIIFQRKLRRSL------------------------DLEQLRERLSVICRSHHS-  147 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~-~--~~~~v~vk~~~~~~~~------------------------~~~~~~~E~~il~~l~h~-  147 (381)
                      ..+.||+|+||.||+|. .  .|+.||+|+.......                        ....+.+|+.++.++.+. 
T Consensus        32 i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~  111 (237)
T smart00090       32 IGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG  111 (237)
T ss_pred             hCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence            35679999999999998 3  5899999987643210                        012356899999999753 


Q ss_pred             -CcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCCCcc-------chH-----------HHHHHhhhcceeecccCC
Q 016850          148 -SLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFT-------VLS-----------TWLSRMQSSSIIVSEENA  208 (381)
Q Consensus       148 -nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-------~~~-----------~~~~~l~~~Nill~~~~~  208 (381)
                       .+.+++++   . ..+|||||+++++|...+.........       ++.           .+|.||+|+||+++ .  
T Consensus       112 i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~--  184 (237)
T smart00090      112 VPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-D--  184 (237)
T ss_pred             CCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-C--
Confidence             34444543   2 348999999988887665332222211       111           33456668888887 2  


Q ss_pred             CccceEEccccccccc
Q 016850          209 GSLCAKICHFGTAELC  224 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~  224 (381)
                        ..++|+|||.+...
T Consensus       185 --~~i~LiDFg~a~~~  198 (237)
T smart00090      185 --GKVVIIDVSQSVEL  198 (237)
T ss_pred             --CCEEEEEChhhhcc
Confidence              45899999998753

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.22  E-value=5e-11  Score=102.97  Aligned_cols=121  Identities=12%  Similarity=0.075  Sum_probs=84.0

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccc----------------------cHHHHHHHHHHHhhcCCC--Ccc
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL----------------------DLEQLRERLSVICRSHHS--SLI  150 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~----------------------~~~~~~~E~~il~~l~h~--nIv  150 (381)
                      ..+.||+|+||.||+|... ++.|+||+.......                      ......+|+.++..+.|+  .++
T Consensus        19 ~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~   98 (198)
T cd05144          19 LGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVP   98 (198)
T ss_pred             cCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCC
Confidence            3577999999999999885 889999986543210                      112367789999999877  455


Q ss_pred             eEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCC-CCcc----------chHHHHHHhhhcceeecccCCCccceEEcccc
Q 016850          151 KLLGACVSGNCGYLVYEHVSGANLADCLRNPRN-PSFT----------VLSTWLSRMQSSSIIVSEENAGSLCAKICHFG  219 (381)
Q Consensus       151 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~----------~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG  219 (381)
                      ..++.    ...++||||+++++|...+..... ....          ....+|.||+|+||+++++    ..++|+|||
T Consensus        99 ~~~~~----~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~----~~~~liDfg  170 (198)
T cd05144          99 KPIDW----NRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDD----EKIYIIDWP  170 (198)
T ss_pred             ceeec----CCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCC----CcEEEEECC
Confidence            55542    445899999999999876541110 0000          1112445788999999875    569999999


Q ss_pred             ccccc
Q 016850          220 TAELC  224 (381)
Q Consensus       220 ~a~~~  224 (381)
                      ++..+
T Consensus       171 ~~~~~  175 (198)
T cd05144         171 QMVST  175 (198)
T ss_pred             ccccC
Confidence            98654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.20  E-value=4.8e-11  Score=105.92  Aligned_cols=121  Identities=12%  Similarity=0.213  Sum_probs=87.0

Q ss_pred             cccc-cCCCceEEEEEECCceEEEEEecccc--------c-----ccHHHHHHHHHHHhhcCCCCc--ceEEEEEEeCC-
Q 016850           98 KKFT-SSSASASWRGTIRGKDVIIFQRKLRR--------S-----LDLEQLRERLSVICRSHHSSL--IKLLGACVSGN-  160 (381)
Q Consensus        98 ~~lg-~G~~g~V~~~~~~~~~v~vk~~~~~~--------~-----~~~~~~~~E~~il~~l~h~nI--v~l~~~~~~~~-  160 (381)
                      ..|| .||.|+||.+...+..+++|......        .     ....++.+|++++.+|+|++|  ++.+++..... 
T Consensus        37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            4578 89999999999999999998764211        1     134568899999999998775  77777654322 


Q ss_pred             ---eeeEEEeccCC-CCHHHHhcCCCCCCcc---chHH----------HHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          161 ---CGYLVYEHVSG-ANLADCLRNPRNPSFT---VLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       161 ---~~~lv~e~~~~-gsL~~~l~~~~~~~~~---~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                         ..++||||+++ .+|.+++.... ....   ++..          +|+||+|.|||++.+    ..++|+|||.+..
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~~~~-l~~~~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~----~~v~LIDfg~~~~  191 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQEAP-LSEEQWQAIGQLIARFHDAGVYHADLNAHNILLDPD----GKFWLIDFDRGEL  191 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHhcCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCchhEEEcCC----CCEEEEECCCccc
Confidence               23599999997 69999886542 2212   1222          234677999999875    3599999998865

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.13  E-value=6.4e-11  Score=114.16  Aligned_cols=129  Identities=14%  Similarity=0.108  Sum_probs=83.0

Q ss_pred             cCCcccccccCCCceEEEEEEC-CceEEEEEeccccccc----------------------------------------H
Q 016850           93 NNFLAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLD----------------------------------------L  131 (381)
Q Consensus        93 ~~f~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~----------------------------------------~  131 (381)
                      ..|..+.||.|++|.||+|++. |+.||||+.+......                                        .
T Consensus       118 ~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E  197 (437)
T TIGR01982       118 AEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE  197 (437)
T ss_pred             hhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence            4566788999999999999984 8999999975431110                                        0


Q ss_pred             HHHHHHHHHHhhc----CCCCcceEEEEEE-eCCeeeEEEeccCCCCHHHHhcCCC-CCCccc-----h----------H
Q 016850          132 EQLRERLSVICRS----HHSSLIKLLGACV-SGNCGYLVYEHVSGANLADCLRNPR-NPSFTV-----L----------S  190 (381)
Q Consensus       132 ~~~~~E~~il~~l----~h~nIv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~-----~----------~  190 (381)
                      -++.+|...+.++    +|.+-|.+-.++. .....+|||||++|++|.+++.... ......     +          .
T Consensus       198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCC
Confidence            0244555555554    2333333333332 2345689999999999988764321 111010     0          1


Q ss_pred             HHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          191 TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       191 ~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      .+|+|+||.||+++++    +.++++|||++..+.
T Consensus       278 ~~H~D~hPgNilv~~~----g~i~liDfG~~~~l~  308 (437)
T TIGR01982       278 FFHADLHPGNIFVLKD----GKIIALDFGIVGRLS  308 (437)
T ss_pred             ceeCCCCcccEEECCC----CcEEEEeCCCeeECC
Confidence            2345778999999876    559999999997653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.12  E-value=1.2e-10  Score=95.32  Aligned_cols=120  Identities=13%  Similarity=0.166  Sum_probs=89.9

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCC--CCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHH--SSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      +.||+|.++.||++...++.+++|.......  ...+.+|+.++..++|  .++++++++....+..+++|||++++.+.
T Consensus         4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~   81 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD   81 (155)
T ss_pred             eecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence            5689999999999999888999988644332  5679999999999976  59999999988888899999999888776


Q ss_pred             HH-----hcCCCC-----CCccc---hHHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          176 DC-----LRNPRN-----PSFTV---LSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       176 ~~-----l~~~~~-----~~~~~---~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      .+     ......     ...+.   ....|.+++|.||+++..    ..+++.|||.+..
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~----~~~~l~Df~~~~~  138 (155)
T cd05120          82 EVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG----KILGIIDWEYAGY  138 (155)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC----cEEEEEecccccC
Confidence            42     000000     00000   113456788999999874    5599999998864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.10  E-value=9.8e-11  Score=114.41  Aligned_cols=133  Identities=15%  Similarity=0.159  Sum_probs=87.0

Q ss_pred             cCCcccccccCCCceEEEEEEC--CceEEEEEecccccc--------------------------c--------HH----
Q 016850           93 NNFLAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--------------------------D--------LE----  132 (381)
Q Consensus        93 ~~f~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--------------------------~--------~~----  132 (381)
                      ..|..+.||.|++|.||+|+++  |+.||||+.+..-..                          .        .+    
T Consensus       120 ~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        120 DDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             HhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4576788999999999999984  799999997643100                          0        11    


Q ss_pred             --HHHHHHHHHhhc----CCCCcceEEEEEEe-CCeeeEEEeccCCCCHHHH--hcCCCC----CCccch----------
Q 016850          133 --QLRERLSVICRS----HHSSLIKLLGACVS-GNCGYLVYEHVSGANLADC--LRNPRN----PSFTVL----------  189 (381)
Q Consensus       133 --~~~~E~~il~~l----~h~nIv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~~----~~~~~~----------  189 (381)
                        ++.+|+..+.++    .+.+.|.+-.++.+ ....+|||||++|+.|.++  +...+.    .....+          
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~  279 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRD  279 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence              234444444444    24444444444433 4556899999999999874  333221    111111          


Q ss_pred             HHHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          190 STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       190 ~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      ..+|+|+||+||+++.++..+..+++.|||++..+.
T Consensus       280 GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        280 GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            134678999999999886555689999999987653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.94  E-value=3.2e-10  Score=100.68  Aligned_cols=193  Identities=18%  Similarity=0.233  Sum_probs=111.2

Q ss_pred             HHHHHHHHhhcCCCCcceEEEEEEeCC-----eeeEEEeccCCCCHHHHhcCCC----CCCccchHHHHHHhhhcceeec
Q 016850          134 LRERLSVICRSHHSSLIKLLGACVSGN-----CGYLVYEHVSGANLADCLRNPR----NPSFTVLSTWLSRMQSSSIIVS  204 (381)
Q Consensus       134 ~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~~~~~l~~~Nill~  204 (381)
                      ...-+..|-++-|.|||+++.|+.+..     ...++.|||..|+|.++|++.+    .+.......|+.||..+--.|+
T Consensus       114 ~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh  193 (458)
T KOG1266|consen  114 RRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH  193 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh
Confidence            333445566778999999999987643     4788999999999999998643    3444556677777653322222


Q ss_pred             ccCC---------------CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHH
Q 016850          205 EENA---------------GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVL  269 (381)
Q Consensus       205 ~~~~---------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~  269 (381)
                      ...+               .|+.+||.----...................|-++|.+||.-.....+.++|||+||...+
T Consensus       194 s~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl  273 (458)
T KOG1266|consen  194 SCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL  273 (458)
T ss_pred             ccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence            2111               2233554321111000000001111122234678999999766666788999999999999


Q ss_pred             HHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       270 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                      ||..+.---.    ....   ...........+.+        ..           ...-++++.+|++-.|..||+|.+
T Consensus       274 emailEiq~t----nseS---~~~~ee~ia~~i~~--------le-----------n~lqr~~i~kcl~~eP~~rp~ar~  327 (458)
T KOG1266|consen  274 EMAILEIQST----NSES---KVEVEENIANVIIG--------LE-----------NGLQRGSITKCLEGEPNGRPDARL  327 (458)
T ss_pred             HHHHheeccC----CCcc---eeehhhhhhhheee--------cc-----------CccccCcCcccccCCCCCCcchhh
Confidence            9988752210    0000   00000000000000        00           012246789999999999999998


Q ss_pred             HHH
Q 016850          350 VTG  352 (381)
Q Consensus       350 vl~  352 (381)
                      ++.
T Consensus       328 llf  330 (458)
T KOG1266|consen  328 LLF  330 (458)
T ss_pred             hhc
Confidence            864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.93  E-value=1.1e-10  Score=117.48  Aligned_cols=209  Identities=17%  Similarity=0.260  Sum_probs=138.8

Q ss_pred             HHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCCC-----------------ccchHHHHHHh
Q 016850          134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPS-----------------FTVLSTWLSRM  196 (381)
Q Consensus       134 ~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~~~~~~l  196 (381)
                      ...+-.++-.-+||-+++..--+.-....+||++|+.+|+|...|+......                 +....+.++++
T Consensus       851 ~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~  930 (1205)
T KOG0606|consen  851 IRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDL  930 (1205)
T ss_pred             cCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccc
Confidence            3344444444456777766555555677899999999999999988754222                 11112344555


Q ss_pred             hhcceeecccCCCccceEEcccccccccccCCC---------------------------CccccccccCCCccccchhh
Q 016850          197 QSSSIIVSEENAGSLCAKICHFGTAELCGEVSG---------------------------NESGKVNKIEGTRGYMAPEF  249 (381)
Q Consensus       197 ~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~  249 (381)
                      +|.|++...+    ++.+++|||+....+....                           +.........||+.|.+||.
T Consensus       931 ~p~~~l~~~~----gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~ 1006 (1205)
T KOG0606|consen  931 KPDSLLIAYD----GHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEI 1006 (1205)
T ss_pred             cccchhhccc----CCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcc
Confidence            6667776665    5699999984433211100                           00011234679999999999


Q ss_pred             hcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccccc-CCCCHHHHHH
Q 016850          250 QASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK-DSYPVEVAEK  328 (381)
Q Consensus       250 ~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  328 (381)
                      +.+...+..+|.|++|++++|.++|.+||.....+..                      +..+...... +.-+...+..
T Consensus      1007 ~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~----------------------f~ni~~~~~~~p~g~~~~s~~ 1064 (1205)
T KOG0606|consen 1007 LLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQI----------------------FENILNRDIPWPEGPEEGSYE 1064 (1205)
T ss_pred             cccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhh----------------------hhccccCCCCCCCCccccChh
Confidence            9999999999999999999999999999975433211                      0111111111 1123456778


Q ss_pred             HHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhc
Q 016850          329 MVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       329 l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      ..+++...+..+|.+|..|.-..+.-..-+.+..+|+.+.
T Consensus      1065 aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1065 AQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLA 1104 (1205)
T ss_pred             hhhhhhhhhccCchhccCcccccccccCCccCCCCccccc
Confidence            9999999999999999988866666666777778887764

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.89  E-value=4.6e-09  Score=89.69  Aligned_cols=119  Identities=13%  Similarity=0.085  Sum_probs=75.3

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccc--cHHH----------------------HHHHHHHHhhcCCC--Cc
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--DLEQ----------------------LRERLSVICRSHHS--SL  149 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--~~~~----------------------~~~E~~il~~l~h~--nI  149 (381)
                      .+.||+|+||.||+|... ++.||||+.......  ....                      ...|...+.++.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            356999999999999987 889999986543221  1111                      13566667776443  35


Q ss_pred             ceEEEEEEeCCeeeEEEeccCCCC-----HHHHhcCCC-CC----------Cccc-hHHHHHHhhhcceeecccCCCccc
Q 016850          150 IKLLGACVSGNCGYLVYEHVSGAN-----LADCLRNPR-NP----------SFTV-LSTWLSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       150 v~l~~~~~~~~~~~lv~e~~~~gs-----L~~~l~~~~-~~----------~~~~-~~~~~~~l~~~Nill~~~~~~~~~  212 (381)
                      .+.++.    ...++||||+++++     |.+...... ..          ..+. ...+|.||+|+||+++ +    ..
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~----~~  152 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D----GK  152 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C----Cc
Confidence            555543    34689999999843     333322100 00          0011 2234668889999998 3    55


Q ss_pred             eEEccccccccc
Q 016850          213 AKICHFGTAELC  224 (381)
Q Consensus       213 ~kl~DFG~a~~~  224 (381)
                      ++|+|||.+...
T Consensus       153 ~~liDfg~a~~~  164 (187)
T cd05119         153 VYIIDVPQAVEI  164 (187)
T ss_pred             EEEEECcccccc
Confidence            999999998653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.78  E-value=2.1e-08  Score=84.05  Aligned_cols=117  Identities=9%  Similarity=0.064  Sum_probs=79.2

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCc-ceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSL-IKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      +.|++|.++.||+++..++.+++|....... ....+.+|+.++..+.+.++ .+++.+.  ....++||||++|.++.+
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~   80 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLT   80 (170)
T ss_pred             eecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccc
Confidence            5688999999999999999999998543321 23456889999999865554 4555543  334579999999988864


Q ss_pred             HhcCCCCCCccch---------------HHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          177 CLRNPRNPSFTVL---------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       177 ~l~~~~~~~~~~~---------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      .-.. ......++               ...|.|++|.||++++     ..++++|||.+..
T Consensus        81 ~~~~-~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~-----~~~~liDf~~a~~  136 (170)
T cd05151          81 EDFS-DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD-----GRLWLIDWEYAGM  136 (170)
T ss_pred             cccc-CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC-----CeEEEEecccccC
Confidence            3000 00000111               1256678899999984     3489999998754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.67  E-value=2.1e-07  Score=90.55  Aligned_cols=149  Identities=18%  Similarity=0.209  Sum_probs=98.0

Q ss_pred             CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCC----Cccch
Q 016850          114 RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP----SFTVL  189 (381)
Q Consensus       114 ~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~  189 (381)
                      .+.+|.|...+.......+...+-++-|+.|+||||+++++.++..+++|||+|-+  -.|..++++....    ...++
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~~~~v~~Gl~qI  113 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELGKEEVCLGLFQI  113 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhHHHHHHHHHHHH
Confidence            37788887766655544567888899999999999999999999999999999998  4888888775421    11222


Q ss_pred             HHHHHHhh-----------hcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcc
Q 016850          190 STWLSRMQ-----------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQK  258 (381)
Q Consensus       190 ~~~~~~l~-----------~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  258 (381)
                      +..+.-|+           -.-|+++..    +..||++|.++........    ......--..|..|+.+...  +..
T Consensus       114 l~AL~FL~~d~~lvHgNv~~~SVfVn~~----GeWkLggle~v~~~~~~~~----~~~~~~~~~s~~~P~~~~~s--~~s  183 (690)
T KOG1243|consen  114 LAALSFLNDDCNLVHGNVCKDSVFVNES----GEWKLGGLELVSKASGFNA----PAKSLYLIESFDDPEEIDPS--EWS  183 (690)
T ss_pred             HHHHHHHhccCCeeeccEeeeeEEEcCC----CcEEEeeeEEEeccccCCc----ccccchhhhcccChhhcCcc--ccc
Confidence            22222232           222344444    5589999988755322110    11111122345666643221  245


Q ss_pred             hhHHHHHHHHHHHHhC
Q 016850          259 CDVYAFGVVVLELLSG  274 (381)
Q Consensus       259 sDIwSlGvil~elltg  274 (381)
                      .|.|-|||+++|++.|
T Consensus       184 ~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  184 IDSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhhHHHHHHHHhCc
Confidence            7999999999999999

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.66  E-value=1.8e-07  Score=77.45  Aligned_cols=120  Identities=18%  Similarity=0.247  Sum_probs=83.7

Q ss_pred             ccccCCCceEEEEEECCceEEEEEecccccc--------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           99 KFTSSSASASWRGTIRGKDVIIFQRKLRRSL--------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.+|+=+.+|.+.+.|.++++|....+.-.        ..++-.+|+.+|.+++--.|..-+=+..+.+...|+|||++
T Consensus         3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~   82 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE   82 (204)
T ss_pred             hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence            4689999999999888888777765443221        23556789999999864444333434457777789999999


Q ss_pred             CCCHHHHhcCCCCCCccchH----------HHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          171 GANLADCLRNPRNPSFTVLS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      |-.|.++|......-...+.          .+|-||.++||++...+     +.++|||++..
T Consensus        83 G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-----i~~IDfGLg~~  140 (204)
T COG3642          83 GELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-----IYFIDFGLGEF  140 (204)
T ss_pred             ChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-----EEEEECCcccc
Confidence            88888898876322222222          23345668888888764     89999999864

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.52  E-value=8.4e-08  Score=92.11  Aligned_cols=222  Identities=12%  Similarity=0.041  Sum_probs=143.4

Q ss_pred             ccccccCCCceEEEEEEC---CceEEEEEecccccccHH--HHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR---GKDVIIFQRKLRRSLDLE--QLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~~~~~--~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ...||.|.|+.|+....+   +..+++|...........  .-..|+.+...+ .|.|++.++..|......||-.|||+
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~  349 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCE  349 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhc
Confidence            356899999999987654   566777654433332222  234566666665 69999999888888888889999999


Q ss_pred             CCCHHHHhcCC------C-----------CCCccchHHHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNP------R-----------NPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~------~-----------~~~~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ++++...+.-.      .           ....+....++.|++|.||++..++   +.-++.|||++..+..       
T Consensus       350 ~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~---~~~~~~~~~~~t~~~~-------  419 (524)
T KOG0601|consen  350 GGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG---FFSKLGDFGCWTRLAF-------  419 (524)
T ss_pred             CcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch---hhhhccccccccccce-------
Confidence            99887655211      0           1113344556678899999998864   6689999998853211       


Q ss_pred             cccccCCCcccc--chhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          234 KVNKIEGTRGYM--APEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       234 ~~~~~~gt~~y~--aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ......+.-+++  +++......+..+.|+||||..+.|.+++...-+..                         ..+..
T Consensus       420 ~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-------------------------~~~~~  474 (524)
T KOG0601|consen  420 SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-------------------------VQSLT  474 (524)
T ss_pred             ecccccccccccccchhhccccccccccccccccccccccccCcccCccc-------------------------cccee
Confidence            001112233333  555556677889999999999999999986432210                         00111


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                      +.. ...+..+ .....+..+...++..+++.||.+.++....+
T Consensus       475 i~~-~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  475 IRS-GDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             eec-ccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence            111 1111112 23377888999999999999999888765443

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.37  E-value=1.1e-06  Score=72.51  Aligned_cols=127  Identities=12%  Similarity=0.206  Sum_probs=85.9

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccc--------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      +...|-+|+=+.|+++.+.|+..+||....+.-.        ...+..+|+++|.+++--.|.--.=++.|...-+|+||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            3455679999999999999999999876443221        35677889999999864444444445566666789999


Q ss_pred             ccCC-CCHHHHhcCCCCCC-ccc--------hH----------HHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          168 HVSG-ANLADCLRNPRNPS-FTV--------LS----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       168 ~~~~-gsL~~~l~~~~~~~-~~~--------~~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      |++| -++.+++....... ...        +.          .+|-||..+||++..++. ...+.++|||++..
T Consensus        91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~-~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGN-QITPILIDFGLSSV  165 (229)
T ss_pred             eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCC-cCceEEEeecchhc
Confidence            9974 27888886532211 111        11          122355689999887642 25569999999854

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.23  E-value=4.9e-06  Score=72.78  Aligned_cols=81  Identities=16%  Similarity=0.247  Sum_probs=61.6

Q ss_pred             cccccCCCceEEEEEECC-ceEEEEEeccccc-ccHHHHHHHHHHHhhcCC--CCcceEEEEEEeC---CeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIRG-KDVIIFQRKLRRS-LDLEQLRERLSVICRSHH--SSLIKLLGACVSG---NCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~---~~~~lv~e~~~  170 (381)
                      +.|+.|.++.||++...+ ..+++|....... ....++.+|++++..+.+  .++.+++.+....   +..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            568999999999999875 7888888543322 135678999999999965  4567788876654   36789999999


Q ss_pred             CCCHHHHh
Q 016850          171 GANLADCL  178 (381)
Q Consensus       171 ~gsL~~~l  178 (381)
                      |++|.+.+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            88776543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.21  E-value=4e-05  Score=72.92  Aligned_cols=195  Identities=13%  Similarity=0.153  Sum_probs=122.6

Q ss_pred             ceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEE----eCCeeeEEEeccCC-CCHHHHh
Q 016850          106 SASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV----SGNCGYLVYEHVSG-ANLADCL  178 (381)
Q Consensus       106 g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~~~~~lv~e~~~~-gsL~~~l  178 (381)
                      .+-|++..  +|..|+.|++.............-+++++++.|+|||++.++|.    .+..+++|++|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            56688887  47778888764444444444556688999999999999999887    35568999999884 4677665


Q ss_pred             cCCC---------------CCCccchHHHH-------HHhh----------hcceeecccCCCccceEEccccccccccc
Q 016850          179 RNPR---------------NPSFTVLSTWL-------SRMQ----------SSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       179 ~~~~---------------~~~~~~~~~~~-------~~l~----------~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      ....               ..++..+..++       ..||          +.+||+...    ..++|+..|....+..
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~----~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK----MRIRISGCGIMDVLQE  445 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc----ceEEEecccceeeecC
Confidence            4322               11222333333       3344          778888876    4588888887655422


Q ss_pred             CCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                         +.        +       |-+..   -.+-|.=.||.+++-|.||..--..          ........        
T Consensus       446 ---d~--------~-------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~----------~d~~~~s~--------  486 (655)
T KOG3741|consen  446 ---DP--------T-------EPLES---QQQNDLRDLGLLLLALATGTENSNR----------TDSTQSSH--------  486 (655)
T ss_pred             ---CC--------C-------cchhH---HhhhhHHHHHHHHHHHhhccccccc----------ccchHHHH--------
Confidence               11        0       11111   2356888999999999999532100          00000000        


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS  355 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~  355 (381)
                                 .......++.++++++.-....++++ -++.+++.++-
T Consensus       487 -----------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~  523 (655)
T KOG3741|consen  487 -----------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIG  523 (655)
T ss_pred             -----------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHH
Confidence                       01113356778888888888888887 67788776554

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.18  E-value=3.7e-06  Score=82.03  Aligned_cols=128  Identities=15%  Similarity=0.149  Sum_probs=84.8

Q ss_pred             cCCcccccccCCCceEEEEEEC-CceEEEEEecccccc--------------------------c--------------H
Q 016850           93 NNFLAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--------------------------D--------------L  131 (381)
Q Consensus        93 ~~f~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--------------------------~--------------~  131 (381)
                      ..|....|+.++-|.||+|++. |+.||||+.+..-..                          .              .
T Consensus       126 ~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~E  205 (517)
T COG0661         126 SEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREE  205 (517)
T ss_pred             HHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHH
Confidence            4577789999999999999997 899999997642110                          0              0


Q ss_pred             HHHHHHHHHHhhc----C-CCCcceEEEEEEeCCeeeEEEeccCCCCHHHH--hcCCCCCCccch---------------
Q 016850          132 EQLRERLSVICRS----H-HSSLIKLLGACVSGNCGYLVYEHVSGANLADC--LRNPRNPSFTVL---------------  189 (381)
Q Consensus       132 ~~~~~E~~il~~l----~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~--l~~~~~~~~~~~---------------  189 (381)
                      -++.+|..-+.++    + .++|.--.=|++-.....|+|||++|-.+.+.  ++..+ ...+.+               
T Consensus       206 lDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g-~d~k~ia~~~~~~f~~q~~~d  284 (517)
T COG0661         206 LDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG-IDRKELAELLVRAFLRQLLRD  284 (517)
T ss_pred             hCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC-CCHHHHHHHHHHHHHHHHHhc
Confidence            1234555555554    2 33332222223335667899999999889888  44422 221111               


Q ss_pred             HHHHHHhhhcceeecccCCCccceEEcccccccccc
Q 016850          190 STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       190 ~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      ..+|.|.||.||+++.+    +.+.+.|||+...+.
T Consensus       285 gffHaDpHpGNi~v~~~----g~i~~lDfGi~g~l~  316 (517)
T COG0661         285 GFFHADPHPGNILVRSD----GRIVLLDFGIVGRLD  316 (517)
T ss_pred             CccccCCCccceEEecC----CcEEEEcCcceecCC
Confidence            12456889999999998    559999999987653

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.09  E-value=9.2e-07  Score=85.73  Aligned_cols=166  Identities=13%  Similarity=0.098  Sum_probs=111.3

Q ss_pred             ccccCCCceEEEEEECCceEE-EEEecccccccHHHHHHHHHHHhhcCCCC-cceEEEEEEeCCeeeEEEeccCCC-CHH
Q 016850           99 KFTSSSASASWRGTIRGKDVI-IFQRKLRRSLDLEQLRERLSVICRSHHSS-LIKLLGACVSGNCGYLVYEHVSGA-NLA  175 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~v~-vk~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~lv~e~~~~g-sL~  175 (381)
                      .+++|++++++|.+...+... .+.+..     .....-++++|.+++||| .|..++-+..++..+++|+++.+| +..
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~  323 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSA  323 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccc
Confidence            478999999999987533332 332211     145566899999999999 777777777778899999999776 221


Q ss_pred             HHhcC-CCCCCccchH-------HHHH------HhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCC
Q 016850          176 DCLRN-PRNPSFTVLS-------TWLS------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGT  241 (381)
Q Consensus       176 ~~l~~-~~~~~~~~~~-------~~~~------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt  241 (381)
                      ..... ...+..-+..       .-+.      ..++.||+..+.     ..+..||+....+....     ......+|
T Consensus       324 ~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d~~l~s~~-----~~~~~~~~v~~~L~~~~-----~~~t~~~~  393 (829)
T KOG0576|consen  324 LEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRDNILGSEE-----EVKLLDFAVPPQLTRTM-----KPRTAIGT  393 (829)
T ss_pred             ccCChhhHhhhhhhhhhhhhhhcccccccccccccCccccccccc-----ccccccccCCcccCccc-----ccccCCCC
Confidence            11110 0000000000       0011      122446666653     38999999987664321     45567899


Q ss_pred             ccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcccc
Q 016850          242 RGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLK  279 (381)
Q Consensus       242 ~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~  279 (381)
                      +.|+|||+.....+..+.|.|++|+-..++.-|-+|-.
T Consensus       394 ~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  394 PEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             CCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence            99999999999999999999999998888888877753

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.08  E-value=1.5e-05  Score=65.68  Aligned_cols=112  Identities=16%  Similarity=0.223  Sum_probs=77.1

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcc-eEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLI-KLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv-~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      +.|++|.+|.||+|.+.+..+|+|+.+  .+..+..+..|+++|..+.--++. ++|.|-.    -++.|||+.|-.|.+
T Consensus        28 ~~L~KG~~s~Vyl~~~~~~~~a~Kvrr--~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~L~~  101 (201)
T COG2112          28 KELAKGTTSVVYLGEWRGGEVALKVRR--RDSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRPLGK  101 (201)
T ss_pred             hhhhcccccEEEEeeccCceEEEEEec--CCcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcchhh
Confidence            568999999999999999999999854  455578899999999999765554 4555422    235699998878887


Q ss_pred             HhcCCCCCCccchHHHH-------------HHhh--hcceeecccCCCccceEEcccccccc
Q 016850          177 CLRNPRNPSFTVLSTWL-------------SRMQ--SSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       177 ~l~~~~~~~~~~~~~~~-------------~~l~--~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      +-.....   +++...+             ..|+  -.||++.+.     .+.|+||.-|..
T Consensus       102 ~~~~~~r---k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~-----~~~iIDFd~At~  155 (201)
T COG2112         102 LEIGGDR---KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDR-----DVYIIDFDSATF  155 (201)
T ss_pred             hhhcccH---HHHHHHHHHHHHHHHhccchhhhcCCceeEEecCC-----cEEEEEccchhh
Confidence            7653211   1111111             1222  345555552     299999998864

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.91  E-value=0.00059  Score=63.72  Aligned_cols=246  Identities=13%  Similarity=0.062  Sum_probs=130.7

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEE------EeC-CeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGAC------VSG-NCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~------~~~-~~~~lv~e~  168 (381)
                      +..||+|+-+.+|-.---+.. +.|+..........+.   +..|... .||-+-.=+.|=      -+. ...-++|..
T Consensus        16 gr~LgqGgea~ly~l~e~~d~-VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~   91 (637)
T COG4248          16 GRPLGQGGEADLYTLGEVRDQ-VAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK   91 (637)
T ss_pred             CccccCCccceeeecchhhch-hheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence            567999999999855333333 3454433333222222   2233333 565443312111      122 226788888


Q ss_pred             cCCCC-HHHHhcC---CCC---CCccchHHHHH-----------------HhhhcceeecccCCCccceEEccccccccc
Q 016850          169 VSGAN-LADCLRN---PRN---PSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       169 ~~~gs-L~~~l~~---~~~---~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      +.+-. +..++.-   +..   ..+.-++...+                 |+.++|+|+.++.    .+.|.|-..-...
T Consensus        92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~----~V~LVdsDsfqi~  167 (637)
T COG4248          92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDS----KVVLVDSDSFQIN  167 (637)
T ss_pred             CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCc----eEEEEcccceeec
Confidence            86542 2222211   111   12222222222                 3337788887773    3666654322221


Q ss_pred             ccCCCCccccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhC-CccccccccCCcccccchhHHHHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSG-EEVLKFVFDEGIDGYRRVSVVDKA  298 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~  298 (381)
                           .........+|...|.+||...     +-.-+...|.|.|||++++++.| ++||..+......+.+...-+   
T Consensus       168 -----~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I---  239 (637)
T COG4248         168 -----ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI---  239 (637)
T ss_pred             -----cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh---
Confidence                 1222344567999999999654     33456789999999999999886 999986544333222211000   


Q ss_pred             HHHHcCCccchhhhhcccccC---CCC-HHHHHHHHHHHHHhhcc--CCCCCCChHHHHHHHHHHHHHhh
Q 016850          299 SEAVAGGVGGVRKWVDRRLKD---SYP-VEVAEKMVLLGLQCVDE--DPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~l~~li~~cl~~--dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                          ..+.-.....-.+.+++   ..| ...++.+..|..+|+..  ++.-|||++-.+..|..+-.+-+
T Consensus       240 ----a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~  305 (637)
T COG4248         240 ----AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK  305 (637)
T ss_pred             ----hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence                00000000000111111   112 23567889999999986  36689999999988887755443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.90  E-value=0.00016  Score=61.69  Aligned_cols=118  Identities=7%  Similarity=0.001  Sum_probs=72.8

Q ss_pred             cccccCCCceEEEEEEC--------CceEEEEEeccccc----------------------ccHHHHH----HHHHHHhh
Q 016850           98 KKFTSSSASASWRGTIR--------GKDVIIFQRKLRRS----------------------LDLEQLR----ERLSVICR  143 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--------~~~v~vk~~~~~~~----------------------~~~~~~~----~E~~il~~  143 (381)
                      ..||.|-=+.||.|...        +..+|+|+.+....                      .....+.    +|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            45788889999999764        36899998654210                      0122333    79999999


Q ss_pred             cC--CCCcceEEEEEEeCCeeeEEEeccCCCCHH-HHhcCCCCCC------ccc-----------hHHHHHHhhhcceee
Q 016850          144 SH--HSSLIKLLGACVSGNCGYLVYEHVSGANLA-DCLRNPRNPS------FTV-----------LSTWLSRMQSSSIIV  203 (381)
Q Consensus       144 l~--h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~~~~------~~~-----------~~~~~~~l~~~Nill  203 (381)
                      +.  .-++.+++++    ..-+|||||+.++.+. ..|++.....      ..+           ...+|.||.+.||++
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~  158 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW  158 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            84  3567777765    4457999999654332 1222211100      011           112334667888888


Q ss_pred             cccCCCccceEEccccccccc
Q 016850          204 SEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       204 ~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      +++     .+.|+|||.+...
T Consensus       159 ~~~-----~v~iIDF~qav~~  174 (197)
T cd05146         159 HDG-----KVWFIDVSQSVEP  174 (197)
T ss_pred             ECC-----cEEEEECCCceeC
Confidence            753     3899999988653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.81  E-value=6.2e-05  Score=73.47  Aligned_cols=144  Identities=14%  Similarity=0.140  Sum_probs=89.0

Q ss_pred             CCceeeHHHHHHHh------------cCCcccccccCCCceEEEEEEC-CceEEEEEeccccccc---------------
Q 016850           79 NPHIYHLSEICAAT------------NNFLAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLD---------------  130 (381)
Q Consensus        79 ~~~~~~~~~~~~~~------------~~f~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~---------------  130 (381)
                      +...++++|+....            ..|+.+.||.-+.|.|++|+++ |..||||+-+..-...               
T Consensus       136 ~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l  215 (538)
T KOG1235|consen  136 QAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVL  215 (538)
T ss_pred             cCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHH
Confidence            34455666654433            4577889999999999999996 6779999855421100               


Q ss_pred             ----------------HH------HHHHHHHHHhh----cCCCC------cceEEEEEEeCCeeeEEEeccCCCCHHHH-
Q 016850          131 ----------------LE------QLRERLSVICR----SHHSS------LIKLLGACVSGNCGYLVYEHVSGANLADC-  177 (381)
Q Consensus       131 ----------------~~------~~~~E~~il~~----l~h~n------Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~-  177 (381)
                                      .+      +|.+|.+-..+    +.|-+      |.++|-.  -.....|+||||+|..+.|. 
T Consensus       216 ~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~  293 (538)
T KOG1235|consen  216 QKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLD  293 (538)
T ss_pred             HHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHH
Confidence                            01      23344443332    34555      3333322  23457899999999877665 


Q ss_pred             -hcCCCCCCccchH--------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          178 -LRNPRNPSFTVLS--------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       178 -l~~~~~~~~~~~~--------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                       |.+.+..+...+.              .+|.|=||.||+++.+..++..+.+-|||+...+
T Consensus       294 ~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  294 AIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI  355 (538)
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence             4444332211111              2344567999999975545588999999998764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.75  E-value=8.4e-06  Score=79.90  Aligned_cols=137  Identities=14%  Similarity=0.142  Sum_probs=87.9

Q ss_pred             HHHHHhhhcceeecccCCCccceEEcccccccccccCCC----Ccc-ccccccCCCccccchhhhcCCCCCcchhHHHHH
Q 016850          191 TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG----NES-GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG  265 (381)
Q Consensus       191 ~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~----~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlG  265 (381)
                      ..|.-|.|++|+++..    +..||+.|+.+........    .++ ....-..-...|.|||++.+...+.++|+||+|
T Consensus       121 ~VH~ni~p~~i~~na~----~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG  196 (700)
T KOG2137|consen  121 VVHGNIQPEAIVVNAN----GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLG  196 (700)
T ss_pred             eeecccchhheeeccC----cceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeee
Confidence            4566788999999998    5599999998755322111    011 111123346799999999888889999999999


Q ss_pred             HHHHHHH-hCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 016850          266 VVVLELL-SGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR  344 (381)
Q Consensus       266 vil~ell-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  344 (381)
                      |++|.+. .|+.-+.......         .......           ...--...+..+++.++++-+.+++..++..|
T Consensus       197 ~li~~i~~~gk~i~~a~~~~~---------~~~~~~~-----------~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~r  256 (700)
T KOG2137|consen  197 VLIYTIYNGGKSIIAANGGLL---------SYSFSRN-----------LLNAGAFGYSNNLPSELRESLKKLLNGDSAVR  256 (700)
T ss_pred             eEEEEEecCCcchhhccCCcc---------hhhhhhc-----------ccccccccccccCcHHHHHHHHHHhcCCcccC
Confidence            9999999 4555443221100         0000000           00000111234677889999999999999999


Q ss_pred             CChHHHH
Q 016850          345 PDMRQVT  351 (381)
Q Consensus       345 Ps~~evl  351 (381)
                      |++.++.
T Consensus       257 p~~~~l~  263 (700)
T KOG2137|consen  257 PTLDLLL  263 (700)
T ss_pred             cchhhhh
Confidence            9766653

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.68  E-value=0.00025  Score=67.87  Aligned_cols=167  Identities=16%  Similarity=0.140  Sum_probs=97.6

Q ss_pred             cHHHHHHHHHHHhhcCCCCcceEEEEEEeC-CeeeEEEeccCCCCHHHHhcCCCCCCccchHHHHHHhhhcceeecccCC
Q 016850          130 DLEQLRERLSVICRSHHSSLIKLLGACVSG-NCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENA  208 (381)
Q Consensus       130 ~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~l~~~Nill~~~~~  208 (381)
                      ...++.-.++.++.+.|+|..+++++.... ....+|||++ +.+|.+.+..+....+        ++...++++-..  
T Consensus        25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~l~~~--------s~~~~~~~~~~~--   93 (725)
T KOG1093|consen   25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGNLKDE--------SLLAHGVLHLNI--   93 (725)
T ss_pred             cHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcccchh--------hhcccccceehh--
Confidence            346677788999999999999999887643 3467899999 6899999987653211        111333333322  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG  288 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~  288 (381)
                          ++++| .++.        ..   ..                ...+++|||++|.++.|+..|..-+.....     
T Consensus        94 ----~~~td-~~~t--------~~---~~----------------~~~pKsdVwsl~~i~~el~L~~~l~~~~~~-----  136 (725)
T KOG1093|consen   94 ----IYITD-HFLT--------KY---PS----------------PIGPKSDVWSLGFIILELYLGISLEAELTE-----  136 (725)
T ss_pred             ----hhccc-cccc--------cC---CC----------------CCCcchhhhhHHHHHHHHHHhhHHHHHHHH-----
Confidence                56666 1110        00   00                111499999999999999998766542111     


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                         ............. .+.........   .+-..+...+..+...|+-..|..||...+..
T Consensus       137 ---s~~l~~i~k~~~~-d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~  192 (725)
T KOG1093|consen  137 ---SEYLEILLKYYTD-DQELLSTAMEH---LIQLLADKKRLPLLKKCLWLEPIIRPLPMELS  192 (725)
T ss_pred             ---HHHHHHHHHhccC-chhHHHHHHHH---HHHHhhhHhHHHHhccCCccccccccchhHHh
Confidence               0011111110000 01111111111   11234567788999999999999988655543

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.62  E-value=0.00044  Score=62.32  Aligned_cols=124  Identities=11%  Similarity=0.085  Sum_probs=76.5

Q ss_pred             cccCCCceEEEEEECCceEEEEEecccccc-----------cHHHHHHHHHHHhhcCC--CCcceEEEEEEe-----CCe
Q 016850          100 FTSSSASASWRGTIRGKDVIIFQRKLRRSL-----------DLEQLRERLSVICRSHH--SSLIKLLGACVS-----GNC  161 (381)
Q Consensus       100 lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~-----------~~~~~~~E~~il~~l~h--~nIv~l~~~~~~-----~~~  161 (381)
                      +-......|+++.+.|+.+.||........           ....+.+|...+.+|..  -..++++++.+.     ...
T Consensus        30 v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~  109 (268)
T PRK15123         30 FRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRT  109 (268)
T ss_pred             EecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccce
Confidence            344444557788889999999965332210           11247799999988843  334445555543     234


Q ss_pred             eeEEEeccCCC-CHHHHhcCC--CCCCcc-------chHH----------HHHHhhhcceeeccc---CCCccceEEccc
Q 016850          162 GYLVYEHVSGA-NLADCLRNP--RNPSFT-------VLST----------WLSRMQSSSIIVSEE---NAGSLCAKICHF  218 (381)
Q Consensus       162 ~~lv~e~~~~g-sL~~~l~~~--~~~~~~-------~~~~----------~~~~l~~~Nill~~~---~~~~~~~kl~DF  218 (381)
                      -+||||++++. +|.+++...  ......       ++..          +|.|+.+.|||++.+   ..++..+.|+||
T Consensus       110 s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl  189 (268)
T PRK15123        110 SFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDL  189 (268)
T ss_pred             eEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence            68999999865 799988532  111111       1222          233566999999852   122367999999


Q ss_pred             ccccc
Q 016850          219 GTAEL  223 (381)
Q Consensus       219 G~a~~  223 (381)
                      +.+..
T Consensus       190 ~r~~~  194 (268)
T PRK15123        190 HRAQI  194 (268)
T ss_pred             Ccccc
Confidence            98753

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.55  E-value=0.00041  Score=61.03  Aligned_cols=72  Identities=11%  Similarity=0.133  Sum_probs=54.7

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC--CcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS--SLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..||+|..+.||+.  .+..+++|....  ......+.+|.++++.+..-  .+.+.+++..+.+...+|||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~--~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTH--KTGKWMLKLYNP--GFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEe--cCCCEEEEeCCC--CCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            56899999999984  366777777533  33456789999999998543  35777888888888899999998753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.51  E-value=0.00041  Score=58.91  Aligned_cols=108  Identities=15%  Similarity=0.143  Sum_probs=59.6

Q ss_pred             eEEEEEE-CCceEEEEEeccccc----------------------c----cHHHHHHHHHHHhhcCCC--CcceEEEEEE
Q 016850          107 ASWRGTI-RGKDVIIFQRKLRRS----------------------L----DLEQLRERLSVICRSHHS--SLIKLLGACV  157 (381)
Q Consensus       107 ~V~~~~~-~~~~v~vk~~~~~~~----------------------~----~~~~~~~E~~il~~l~h~--nIv~l~~~~~  157 (381)
                      .||.|.. ++..+|+|+.+....                      .    ......+|++.|.++..-  ++.+++++  
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~--   78 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY--   78 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence            3899987 477899998654210                      0    123467899999999654  56777755  


Q ss_pred             eCCeeeEEEeccC--CCCHHHHhcCC--CCCC---ccchHH-----------HHHHhhhcceeecccCCCccceEEcccc
Q 016850          158 SGNCGYLVYEHVS--GANLADCLRNP--RNPS---FTVLST-----------WLSRMQSSSIIVSEENAGSLCAKICHFG  219 (381)
Q Consensus       158 ~~~~~~lv~e~~~--~gsL~~~l~~~--~~~~---~~~~~~-----------~~~~l~~~Nill~~~~~~~~~~kl~DFG  219 (381)
                      +  .-+|||||++  |..+..+....  ....   ..+++.           +|.||.+.|||+++++     +.|+|||
T Consensus        79 ~--~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~-----~~iIDf~  151 (188)
T PF01163_consen   79 N--RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGK-----VYIIDFG  151 (188)
T ss_dssp             E--TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTC-----EEE--GT
T ss_pred             e--CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecce-----EEEEecC
Confidence            2  2369999997  54454433322  0111   111111           1224457788887753     9999999


Q ss_pred             cccc
Q 016850          220 TAEL  223 (381)
Q Consensus       220 ~a~~  223 (381)
                      .+..
T Consensus       152 qav~  155 (188)
T PF01163_consen  152 QAVD  155 (188)
T ss_dssp             TEEE
T ss_pred             ccee
Confidence            8764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.42  E-value=0.00073  Score=60.18  Aligned_cols=75  Identities=9%  Similarity=0.054  Sum_probs=54.5

Q ss_pred             cccCCC-ceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCCCCHHHH
Q 016850          100 FTSSSA-SASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSGANLADC  177 (381)
Q Consensus       100 lg~G~~-g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~  177 (381)
                      |-.|.+ +.||+...++..+++|......   ..++.+|+++++.+. +--+.+++++....+..++|||+++|.+|...
T Consensus         6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           6 VTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            434444 8899998877777777643222   346788999998883 44566888887777778999999998777643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.39  E-value=0.002  Score=55.20  Aligned_cols=117  Identities=15%  Similarity=0.157  Sum_probs=76.8

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccc----------------cccHHHHHHHHHHHhhcC------CCCcceEEEE
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRR----------------SLDLEQLRERLSVICRSH------HSSLIKLLGA  155 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~----------------~~~~~~~~~E~~il~~l~------h~nIv~l~~~  155 (381)
                      ..||+|+.-.||.--. +....||+.....                .....+..+|+.....+.      +.+|.++||+
T Consensus         7 ~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~   85 (199)
T PF10707_consen    7 DLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGF   85 (199)
T ss_pred             cccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEE
Confidence            4589999999986443 3445566654443                123466777777666665      8899999999


Q ss_pred             EEeCCeeeEEEeccCC------CCHHHHhcCCCCCCccchHHHHH--------------HhhhcceeecccCCCccceEE
Q 016850          156 CVSGNCGYLVYEHVSG------ANLADCLRNPRNPSFTVLSTWLS--------------RMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       156 ~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~~~~~~~~--------------~l~~~Nill~~~~~~~~~~kl  215 (381)
                      .+++-.+.+|+|.+.+      -+|.+++.+.....  .+...+.              +++|.||++.....+...+.|
T Consensus        86 veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~--~~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvl  163 (199)
T PF10707_consen   86 VETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE--ELRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVL  163 (199)
T ss_pred             EecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH--HHHHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceEEEE
Confidence            9999888999998643      26888886644322  2222222              455888887776654445566


Q ss_pred             cc
Q 016850          216 CH  217 (381)
Q Consensus       216 ~D  217 (381)
                      +|
T Consensus       164 ID  165 (199)
T PF10707_consen  164 ID  165 (199)
T ss_pred             Ee
Confidence            65

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.27  E-value=0.0029  Score=53.96  Aligned_cols=119  Identities=11%  Similarity=0.084  Sum_probs=75.8

Q ss_pred             ccccccCCC-ceEEEEEECCceEEEEEecc---cccc------------------cHHHHHHHHHHHhhc---CCCCc--
Q 016850           97 AKKFTSSSA-SASWRGTIRGKDVIIFQRKL---RRSL------------------DLEQLRERLSVICRS---HHSSL--  149 (381)
Q Consensus        97 ~~~lg~G~~-g~V~~~~~~~~~v~vk~~~~---~~~~------------------~~~~~~~E~~il~~l---~h~nI--  149 (381)
                      .+.||.|.- |.||++...|..+|+|..+.   ....                  -..-|..|.....+|   .+.++  
T Consensus        42 lefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~A  121 (207)
T PF13095_consen   42 LEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWA  121 (207)
T ss_pred             eeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceE
Confidence            567999999 99999999999999999322   1110                  112366787776666   45566  


Q ss_pred             ceEEEEEEeC------------------CeeeEEEeccCCCCHHHHhcCCCCCCccchHHHHHHhhhcceeecccCCCcc
Q 016850          150 IKLLGACVSG------------------NCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       150 v~l~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~l~~~Nill~~~~~~~~  211 (381)
                      |+++||..=.                  ....||.||++...      ........+++.-+..++...|+..+.+..|.
T Consensus       122 vkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------~~~~~~~~~~~~dl~~~~k~gI~~~Dv~~~ny  195 (207)
T PF13095_consen  122 VKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------PLQIRDIPQMLRDLKILHKLGIVPRDVKPRNY  195 (207)
T ss_pred             EEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------ccchhHHHHHHHHHHHHHHCCeeeccCccccc
Confidence            9999998421                  12468899887544      11111122223333445567777777655333


Q ss_pred             -ceEEcccccc
Q 016850          212 -CAKICHFGTA  221 (381)
Q Consensus       212 -~~kl~DFG~a  221 (381)
                       .-||+|||.+
T Consensus       196 ~~G~lvDfs~~  206 (207)
T PF13095_consen  196 RGGKLVDFSSS  206 (207)
T ss_pred             cCCEEEecccC
Confidence             3699999864

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.99  E-value=0.011  Score=56.39  Aligned_cols=75  Identities=16%  Similarity=0.119  Sum_probs=55.2

Q ss_pred             ccccccCCCceEEEEEECCc--eEEEEEeccc-----c--cccHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCeeeE
Q 016850           97 AKKFTSSSASASWRGTIRGK--DVIIFQRKLR-----R--SLDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~--~v~vk~~~~~-----~--~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~l  164 (381)
                      .+.||.|.+..||++...++  .++||.....     .  ....++...|.+.|+.+.   -.++.+++.+  +.+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            35789999999999998754  8888874311     1  235677888999888872   3567888877  4455789


Q ss_pred             EEeccCCCC
Q 016850          165 VYEHVSGAN  173 (381)
Q Consensus       165 v~e~~~~gs  173 (381)
                      ||||+++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998654

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.92  E-value=0.0045  Score=64.88  Aligned_cols=182  Identities=15%  Similarity=0.130  Sum_probs=114.8

Q ss_pred             HHHHHHHHhhcCCCCcceEEEEEEeCCe----eeEEEeccCCCCHHHHhcCCCCCCccchHHHHHHh-------h---hc
Q 016850          134 LRERLSVICRSHHSSLIKLLGACVSGNC----GYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM-------Q---SS  199 (381)
Q Consensus       134 ~~~E~~il~~l~h~nIv~l~~~~~~~~~----~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~l-------~---~~  199 (381)
                      ...|++.+.++.|+|++.+++|-.....    ..+..|+|..-++...++.-...+...++.++..+       +   -.
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~  308 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLE  308 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccc
Confidence            3446667788899999999998765332    34567889888999999887776666665554432       2   33


Q ss_pred             ceeeccc------CCCccceEEc--ccccccccccCCCCccccccccCCCccccchhhhcCCCCCc--chhHHHHHHHHH
Q 016850          200 SIIVSEE------NAGSLCAKIC--HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQ--KCDVYAFGVVVL  269 (381)
Q Consensus       200 Nill~~~------~~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~--~sDIwSlGvil~  269 (381)
                      ++.+...      ..+.+++.++  ||+..+.+....     ......-+..|-++|......+..  ..|+|.+|..+.
T Consensus       309 ~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~-----~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~  383 (1351)
T KOG1035|consen  309 HVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE-----KSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLL  383 (1351)
T ss_pred             eeEEecccccccccCccceeecchhhhcccccCCCcc-----cchhhcCccccccccccccccchhhhhhHHHHHHHHHh
Confidence            4443322      1122445555  888776643211     112233455677888766555544  479999999999


Q ss_pred             HHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       270 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                      .+..|..+-...                             .....-+    +......+.++..+|+..++++|+++.+
T Consensus       384 ~~~~~~~i~~~~-----------------------------~~~~~~l----~~~~~~~~~d~~~~~~~~~~~~Rl~~~~  430 (1351)
T KOG1035|consen  384 QLSQGEDISEKS-----------------------------AVPVSLL----DVLSTSELLDALPKCLDEDSEERLSALE  430 (1351)
T ss_pred             hhhhcCcccccc-----------------------------cchhhhh----ccccchhhhhhhhhhcchhhhhccchhh
Confidence            999886542100                             0000000    1111126788899999999999999999


Q ss_pred             HHHH
Q 016850          350 VTGL  353 (381)
Q Consensus       350 vl~~  353 (381)
                      ++..
T Consensus       431 ll~~  434 (1351)
T KOG1035|consen  431 LLTH  434 (1351)
T ss_pred             hhhc
Confidence            8764

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.88  E-value=0.0025  Score=56.46  Aligned_cols=118  Identities=16%  Similarity=0.154  Sum_probs=79.3

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEeccccc----------------------ccHHHHHHHHHHHhhcCCC--Ccce
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRS----------------------LDLEQLRERLSVICRSHHS--SLIK  151 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~----------------------~~~~~~~~E~~il~~l~h~--nIv~  151 (381)
                      +..||-|-=+.||.|... |.++++|.-+.-..                      ..+....+|+++|.+|...  .|.+
T Consensus        96 G~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~  175 (304)
T COG0478          96 GTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPK  175 (304)
T ss_pred             ccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCC
Confidence            567999999999999996 89999986332110                      0234467899999999655  7777


Q ss_pred             EEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCCC--ccc----------hHHHHHHhhhcceeecccCCCccceEEcccc
Q 016850          152 LLGACVSGNCGYLVYEHVSGANLADCLRNPRNPS--FTV----------LSTWLSRMQSSSIIVSEENAGSLCAKICHFG  219 (381)
Q Consensus       152 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~----------~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG  219 (381)
                      .+++    +.-.+||||++|-.|...--......  ...          ...+|.|+.+=||+++++    +.+.++||-
T Consensus       176 P~~~----nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~d----g~~~vIDwP  247 (304)
T COG0478         176 PIAW----NRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTED----GDIVVIDWP  247 (304)
T ss_pred             cccc----ccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecC----CCEEEEeCc
Confidence            7765    44579999998766655431111110  001          112344666899999998    449999997


Q ss_pred             ccc
Q 016850          220 TAE  222 (381)
Q Consensus       220 ~a~  222 (381)
                      -+.
T Consensus       248 Q~v  250 (304)
T COG0478         248 QAV  250 (304)
T ss_pred             ccc
Confidence            543

>PRK09902 hypothetical protein; Provisional

Probab=96.78  E-value=0.021  Score=49.24  Aligned_cols=125  Identities=14%  Similarity=0.121  Sum_probs=81.2

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEeccc------ccccHHHHHHHHHHHhhcCC--CCcceEEEEEE---e--CCee
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLR------RSLDLEQLRERLSVICRSHH--SSLIKLLGACV---S--GNCG  162 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~------~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~---~--~~~~  162 (381)
                      ..-+-|.||-+.|++..+.|+.+-+|+-...      .+.....|.+|+..|.+|..  -.+.++. ++.   .  ...-
T Consensus        22 e~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA  100 (216)
T PRK09902         22 EEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRA  100 (216)
T ss_pred             cCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEE
Confidence            3446688999999999998888888874311      13357889999999999842  2344444 332   1  2235


Q ss_pred             eEEEeccCC-CCHHHHhcCCCCC--C-------ccchHHHHHHhh----------hcceeecccCCCccceEEccccccc
Q 016850          163 YLVYEHVSG-ANLADCLRNPRNP--S-------FTVLSTWLSRMQ----------SSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       163 ~lv~e~~~~-gsL~~~l~~~~~~--~-------~~~~~~~~~~l~----------~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      +||+|-+++ -+|.+++.+....  +       +..+...++++|          +.||+++..+  +..++++||--++
T Consensus       101 ~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g--~~~v~lIDlEk~r  178 (216)
T PRK09902        101 LLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG--KAEAGFLDLEKSR  178 (216)
T ss_pred             EEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC--CeeEEEEEhhccc
Confidence            899997742 5899998664321  1       222334445555          7788887543  2568999998665


Q ss_pred             c
Q 016850          223 L  223 (381)
Q Consensus       223 ~  223 (381)
                      .
T Consensus       179 ~  179 (216)
T PRK09902        179 R  179 (216)
T ss_pred             h
Confidence            4

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.47  E-value=0.018  Score=49.82  Aligned_cols=93  Identities=15%  Similarity=0.198  Sum_probs=61.9

Q ss_pred             cHHHHHHHHHHHhhcC--CCCcceEEEEEEeC----CeeeEEEeccCCC-CHHHHhcCCCCCC-------ccchHHH---
Q 016850          130 DLEQLRERLSVICRSH--HSSLIKLLGACVSG----NCGYLVYEHVSGA-NLADCLRNPRNPS-------FTVLSTW---  192 (381)
Q Consensus       130 ~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~-------~~~~~~~---  192 (381)
                      ...+..+|...+..|.  .-.+.+.+++.+..    ...+||+|++++. +|.+++.......       ..++...   
T Consensus        54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK  133 (206)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence            3457888999888884  34466667766642    2358999999874 7999988622111       1112222   


Q ss_pred             -------HHHhhhcceeecccCCCccceEEcccccccc
Q 016850          193 -------LSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       193 -------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                             |.|+++.|||++.++ +...+.++||+.++.
T Consensus       134 lH~~gi~H~Dl~~~NILv~~~~-~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  134 LHDAGIYHGDLNPSNILVDPDD-GQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHCcCCCCCCCcccEEEeCCC-CceeEEEEcchhcee
Confidence                   335669999998875 345799999998765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.38  E-value=0.0039  Score=53.92  Aligned_cols=118  Identities=11%  Similarity=0.067  Sum_probs=66.5

Q ss_pred             ccCCCceEEEEEECCceEEEEEecccccccHHH---------HHHHHHHHhhcCC---CCcceEEEEEE-----eCCeee
Q 016850          101 TSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQ---------LRERLSVICRSHH---SSLIKLLGACV-----SGNCGY  163 (381)
Q Consensus       101 g~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~---------~~~E~~il~~l~h---~nIv~l~~~~~-----~~~~~~  163 (381)
                      -......|.+-..+++.+++|..+.......+.         ..+++..+.+++.   ..++.++.+.+     -....+
T Consensus        40 k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~  119 (229)
T PF06176_consen   40 KNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYV  119 (229)
T ss_pred             cCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEE
Confidence            345567777888889999999755433222222         2344454445432   23333333333     234457


Q ss_pred             EEEeccCCCCHHHHhcCCCC---------CCccchHHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          164 LVYEHVSGANLADCLRNPRN---------PSFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~---------~~~~~~~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      +||||++|-.|.++..-...         ...+....+|.|.||.|+++.+++     +++.||+..+.
T Consensus       120 ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-----i~iID~~~k~~  183 (229)
T PF06176_consen  120 LLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-----IRIIDTQGKRM  183 (229)
T ss_pred             EEEEEecCeecccchhcCHHHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-----EEEEECccccc
Confidence            89999999888765321110         001111223345668888887654     89999986643

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK10593 hypothetical protein; Provisional

Probab=96.37  E-value=0.012  Score=54.10  Aligned_cols=78  Identities=8%  Similarity=0.049  Sum_probs=60.3

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCC---CCcceEEEEEEe---CCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHH---SSLIKLLGACVS---GNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h---~nIv~l~~~~~~---~~~~~lv~e~~~  170 (381)
                      .+.||+|..+.||+....++.+++|..+.  ......+.+|.+.|+.|.-   -.+.++++++.+   .+..+||||+++
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~   96 (297)
T PRK10593         19 VECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR   96 (297)
T ss_pred             eeecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence            45799999999999987766777776432  2234689999999999843   468889988764   366899999999


Q ss_pred             CCCHHH
Q 016850          171 GANLAD  176 (381)
Q Consensus       171 ~gsL~~  176 (381)
                      ++++.+
T Consensus        97 G~~~~~  102 (297)
T PRK10593         97 GVSVEA  102 (297)
T ss_pred             CEecCC
Confidence            888865

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.35  E-value=0.02  Score=51.32  Aligned_cols=73  Identities=12%  Similarity=0.097  Sum_probs=47.4

Q ss_pred             ccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCc-ceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           99 KFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSL-IKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+..|-...+|+....++.+++|........-.-...+|.++++.+..-.+ .++++..  .  -++||||++|..+.
T Consensus         3 ~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~   76 (256)
T TIGR02721         3 TLSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVIT   76 (256)
T ss_pred             cCCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcccc
Confidence            356788889999988888888876322211111245789999999854333 4445443  2  36899999876654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.32  E-value=0.00043  Score=73.94  Aligned_cols=138  Identities=9%  Similarity=-0.051  Sum_probs=96.6

Q ss_pred             HHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEeccCCCCHHHHhcCCCCCC----ccchHH----------------
Q 016850          134 LRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHVSGANLADCLRNPRNPS----FTVLST----------------  191 (381)
Q Consensus       134 ~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~----------------  191 (381)
                      ...|...+++..|++++..+.=...  ..+.+.+++|+.+|.++..|-+.-...    ...+..                
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence            4445566777789998887765442  445789999999999999986532111    111111                


Q ss_pred             ------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHH
Q 016850          192 ------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG  265 (381)
Q Consensus       192 ------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlG  265 (381)
                            ....|++.|.++..+    ..+|++++|+.+...    ..........+++.|+.|++...-.++.++|||..|
T Consensus      1356 nlg~T~v~~~Lkf~lpmIVtn----y~v~~gk~gLdKIkn----p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s 1427 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTN----YNVKLGKGGLDKIKN----PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRS 1427 (2724)
T ss_pred             cCCccchhhhhhhhccceecC----CcccccccccccccC----chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHH
Confidence                  122344556665554    559999999998321    222334556788899999998888888889999999


Q ss_pred             HHHHHHHhCCcccc
Q 016850          266 VVVLELLSGEEVLK  279 (381)
Q Consensus       266 vil~elltg~~pf~  279 (381)
                      +.+|+..-|..+|-
T Consensus      1428 ~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1428 LSLYLRSDGNAYFI 1441 (2724)
T ss_pred             HHHHHHhcccHHHH
Confidence            99999999887763

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.07  E-value=0.012  Score=55.58  Aligned_cols=74  Identities=16%  Similarity=0.068  Sum_probs=53.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecc------cccccHHHHHHHHHHHhhcC--CC-CcceEEEEEEeCCeeeEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKL------RRSLDLEQLRERLSVICRSH--HS-SLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~------~~~~~~~~~~~E~~il~~l~--h~-nIv~l~~~~~~~~~~~lv  165 (381)
                      .+.||.|.-..||++...  ++.|+||.-..      ......++...|.++|+.+.  -| ++.++|.+  +.....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            457899999999999985  67899886421      11235778888999888762  34 56667765  55666789


Q ss_pred             EeccCCC
Q 016850          166 YEHVSGA  172 (381)
Q Consensus       166 ~e~~~~g  172 (381)
                      ||+++..
T Consensus       112 MEdL~~~  118 (409)
T PRK12396        112 MEDLSDH  118 (409)
T ss_pred             HHhCccc
Confidence            9999644

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.06  E-value=0.033  Score=51.01  Aligned_cols=74  Identities=9%  Similarity=0.082  Sum_probs=52.0

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC--CcceEEEE------EEeCCeeeEEEecc
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS--SLIKLLGA------CVSGNCGYLVYEHV  169 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~------~~~~~~~~lv~e~~  169 (381)
                      +.|..|....+|+...+++.+++|+...   ...+.+..|++++..|.+-  .+.+++..      ....+..++|++|+
T Consensus        20 ~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i   96 (296)
T cd05153          20 EGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFL   96 (296)
T ss_pred             ecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeC
Confidence            4566777789999988888888887543   3456788899998888432  34555442      12345668999999


Q ss_pred             CCCCH
Q 016850          170 SGANL  174 (381)
Q Consensus       170 ~~gsL  174 (381)
                      +|..+
T Consensus        97 ~G~~~  101 (296)
T cd05153          97 AGEHL  101 (296)
T ss_pred             CCCCC
Confidence            88765

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.05  E-value=0.019  Score=50.72  Aligned_cols=73  Identities=19%  Similarity=0.228  Sum_probs=45.6

Q ss_pred             cccccCCC-ceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC---CcceEEEEEEeC---CeeeEEEeccC
Q 016850           98 KKFTSSSA-SASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS---SLIKLLGACVSG---NCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~-g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~---nIv~l~~~~~~~---~~~~lv~e~~~  170 (381)
                      +.++.|+. ..||+.   +..+++|...  .......+.+|.++|..|...   -+.++++.....   ...++||++++
T Consensus         3 ~~~~~gG~~n~vy~~---~~~~VlR~~~--~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~   77 (235)
T cd05155           3 EPVDSGGTDNATFRL---GDDMSVRLPS--AAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLE   77 (235)
T ss_pred             eeccCCCcccceEEc---CCceEEEcCC--ccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeec
Confidence            35665555 468976   3466676532  222356899999999888532   345555543332   23488999999


Q ss_pred             CCCHH
Q 016850          171 GANLA  175 (381)
Q Consensus       171 ~gsL~  175 (381)
                      |.++.
T Consensus        78 G~~l~   82 (235)
T cd05155          78 GETAT   82 (235)
T ss_pred             CCCCC
Confidence            87764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=95.39  E-value=0.049  Score=57.40  Aligned_cols=77  Identities=10%  Similarity=0.236  Sum_probs=56.0

Q ss_pred             ccccccCCCceEEEEEECC----ceEEEEEeccccc-ccHHHHHHHHHHHhhcC-CCCc--ceEEEEEEeC---CeeeEE
Q 016850           97 AKKFTSSSASASWRGTIRG----KDVIIFQRKLRRS-LDLEQLRERLSVICRSH-HSSL--IKLLGACVSG---NCGYLV  165 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~----~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~-h~nI--v~l~~~~~~~---~~~~lv  165 (381)
                      ...|+.|.+..+|+....+    ..+++++...... .....+.+|+++|+.|. |.+|  .+++.++.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            4568899999999988764    3566665422211 23457899999999995 6665  8888888764   467899


Q ss_pred             EeccCCCC
Q 016850          166 YEHVSGAN  173 (381)
Q Consensus       166 ~e~~~~gs  173 (381)
                      |||++|..
T Consensus       123 ME~v~G~~  130 (822)
T PLN02876        123 MEYLEGRI  130 (822)
T ss_pred             EEecCCcc
Confidence            99998654

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.33  E-value=0.062  Score=51.18  Aligned_cols=80  Identities=8%  Similarity=-0.043  Sum_probs=55.5

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEeccc----cc---ccHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLR----RS---LDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~----~~---~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      .+.||.|.-..||+....++.++||.-...    ..   ....+-..|.+.|+.+.   ..++.++|.++.  +..+++|
T Consensus        37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlvM  114 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIGM  114 (418)
T ss_pred             EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEEE
Confidence            457899999999999888778888875411    11   24555666777777663   357888998876  3457899


Q ss_pred             eccCCC--CHHHHh
Q 016850          167 EHVSGA--NLADCL  178 (381)
Q Consensus       167 e~~~~g--sL~~~l  178 (381)
                      ||++++  .|.+.|
T Consensus       115 E~L~~~~~ilr~~L  128 (418)
T PLN02756        115 RYLEPPHIILRKGL  128 (418)
T ss_pred             eecCCcceehhhhh
Confidence            999762  354444

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.20  E-value=0.073  Score=46.42  Aligned_cols=77  Identities=18%  Similarity=0.234  Sum_probs=57.8

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC--CcceEEEEEEe---CCeeeEEEeccCCC
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS--SLIKLLGACVS---GNCGYLVYEHVSGA  172 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~~~~---~~~~~lv~e~~~~g  172 (381)
                      +.|+.|..+.||+....++.+++|.....  .....+.+|..+++.|...  .+.+++.+...   ....+++|+++++.
T Consensus         3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~   80 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGR   80 (239)
T ss_dssp             EEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSE
T ss_pred             ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccc
Confidence            46889999999999998889999985443  3467788999999988433  35677765433   34578999999988


Q ss_pred             CHHH
Q 016850          173 NLAD  176 (381)
Q Consensus       173 sL~~  176 (381)
                      .+..
T Consensus        81 ~~~~   84 (239)
T PF01636_consen   81 PLDD   84 (239)
T ss_dssp             EHHH
T ss_pred             cccc
Confidence            8877

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK05231 homoserine kinase; Provisional

Probab=95.11  E-value=0.3  Score=45.24  Aligned_cols=74  Identities=9%  Similarity=-0.006  Sum_probs=47.9

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC--CcceEEE------EEEeCCeeeEEEecc
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS--SLIKLLG------ACVSGNCGYLVYEHV  169 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~------~~~~~~~~~lv~e~~  169 (381)
                      +.|..|....+|+....++.+++|+..   ....+.+..|+.++..|...  .+.+++.      +....+..++++||+
T Consensus        28 ~~l~~G~~n~~y~v~t~~g~~vLK~~~---~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l  104 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQGEYVLTLFE---RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL  104 (319)
T ss_pred             chhccccccceEEEEeCCCcEEEEEec---cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence            345667778999998887788888754   22345666677777776321  2333332      122356678999999


Q ss_pred             CCCCH
Q 016850          170 SGANL  174 (381)
Q Consensus       170 ~~gsL  174 (381)
                      +|..+
T Consensus       105 ~G~~~  109 (319)
T PRK05231        105 EGKWP  109 (319)
T ss_pred             CCCCC
Confidence            87643

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.81  E-value=0.25  Score=42.02  Aligned_cols=77  Identities=17%  Similarity=0.242  Sum_probs=51.5

Q ss_pred             HHHHHHHhhcCC-CCcceEEEEEEeCCeeeEEEeccCCCCHH-------HHhcCCCCCCccchHHH-------H------
Q 016850          135 RERLSVICRSHH-SSLIKLLGACVSGNCGYLVYEHVSGANLA-------DCLRNPRNPSFTVLSTW-------L------  193 (381)
Q Consensus       135 ~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~gsL~-------~~l~~~~~~~~~~~~~~-------~------  193 (381)
                      ..|.-+|+.+++ +++.+++|+|-.    ++|.||...+++.       +++..    ++.....+       +      
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~----~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQS----PWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccccccccccc----CHHHHHHHHHHHHHHHHHHhcC
Confidence            358888888876 699999999832    5789999766553       33322    22222111       1      


Q ss_pred             -------HHhhhcceeecccCCCccceEEcccccccc
Q 016850          194 -------SRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       194 -------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                             .|++++|+.++++    +.+|++|...+..
T Consensus        79 ~~~~~~lcDv~~~nfgv~~~----~~lk~iDld~v~~  111 (188)
T PF12260_consen   79 PLGFFYLCDVSPDNFGVNDD----GRLKLIDLDDVFV  111 (188)
T ss_pred             CCCcEEEeecchHHeEEeCC----CcEEEEechhcch
Confidence                   1456889888876    5599999987644

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.78  E-value=0.19  Score=46.37  Aligned_cols=75  Identities=13%  Similarity=0.067  Sum_probs=48.8

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC--CcceEEEEE------EeCCeeeEEEecc
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS--SLIKLLGAC------VSGNCGYLVYEHV  169 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~~------~~~~~~~lv~e~~  169 (381)
                      ..++.|....+|+...+++.+++|+....  ...+.+..|++++..|...  .+.+++...      ...+..++||||+
T Consensus        28 ~~~~~G~~n~~y~v~t~~~~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i  105 (307)
T TIGR00938        28 KGIAEGVENSNYLLTTDVGRYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFL  105 (307)
T ss_pred             cccCCccccceEEEEeCCCcEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeC
Confidence            34566767899998887778888875332  1345677788888887422  244444421      2245678999999


Q ss_pred             CCCCH
Q 016850          170 SGANL  174 (381)
Q Consensus       170 ~~gsL  174 (381)
                      +|..+
T Consensus       106 ~G~~~  110 (307)
T TIGR00938       106 QGLSV  110 (307)
T ss_pred             CCCCC
Confidence            87543

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=94.53  E-value=0.022  Score=44.54  Aligned_cols=50  Identities=20%  Similarity=0.322  Sum_probs=37.3

Q ss_pred             hcCCcccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhc
Q 016850           92 TNNFLAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRS  144 (381)
Q Consensus        92 ~~~f~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l  144 (381)
                      ...|....||.|+.|.||+|++. |+.||||+.+..-   .+.+...+.+|+.+
T Consensus        11 F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i---~~~i~~Dl~~l~~~   61 (119)
T PF03109_consen   11 FDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGI---EEQIEADLRILRRL   61 (119)
T ss_pred             HHHCCcchhhheehhhheeeeecccchhhhhhcchHH---HHHHHHHHHHHHHH
Confidence            45577889999999999999985 8999999865432   34556666666543

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.43  E-value=0.29  Score=45.86  Aligned_cols=79  Identities=14%  Similarity=0.094  Sum_probs=53.4

Q ss_pred             ccccCCCceEEEEEECC--ceEEEEEecc-------cccccHHHHHHHHHHHhhcC--CC-CcceEEEEEEeCCeeeEEE
Q 016850           99 KFTSSSASASWRGTIRG--KDVIIFQRKL-------RRSLDLEQLRERLSVICRSH--HS-SLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~~--~~v~vk~~~~-------~~~~~~~~~~~E~~il~~l~--h~-nIv~l~~~~~~~~~~~lv~  166 (381)
                      .||.|....||++...+  +.++||.-..       ......++...|.+.|+...  -| ++.++|.+  +.....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            47999999999999874  4788886431       11235667778888887762  34 56666654  555667999


Q ss_pred             eccCCCC-HHHHhc
Q 016850          167 EHVSGAN-LADCLR  179 (381)
Q Consensus       167 e~~~~gs-L~~~l~  179 (381)
                      |+++... |.+.|.
T Consensus        80 EdL~~~~ilR~~Li   93 (370)
T TIGR01767        80 EDLSHHKIARKGLI   93 (370)
T ss_pred             hhCccchHHHHHHH
Confidence            9996543 434443

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.55  E-value=0.13  Score=48.52  Aligned_cols=118  Identities=13%  Similarity=0.091  Sum_probs=68.3

Q ss_pred             HHHHHhcCCcccccccCCCceEEEEEEC-----------------CceEEEEEecccccccHHHHHHHHHHHhhc-CCCC
Q 016850           87 EICAATNNFLAKKFTSSSASASWRGTIR-----------------GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSS  148 (381)
Q Consensus        87 ~~~~~~~~f~~~~lg~G~~g~V~~~~~~-----------------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~n  148 (381)
                      ++..+...|....||.|+-+.||+|..+                 .+.+|+|+.....   .+++.+.+.||... +-+|
T Consensus       184 ~~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V---~~~ir~Dl~Il~f~Akl~~  260 (565)
T KOG1236|consen  184 KIEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNV---EKQIRLDLGILGFGAKLIN  260 (565)
T ss_pred             cHHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccH---HHHHHHHHHHHhhhhhhhh
Confidence            3444455677889999999999998752                 2467787754432   23444444444433 1222


Q ss_pred             cceEEEEE----------------------------------------------EeCCeeeEEEeccCCCCHHHHhcCCC
Q 016850          149 LIKLLGAC----------------------------------------------VSGNCGYLVYEHVSGANLADCLRNPR  182 (381)
Q Consensus       149 Iv~l~~~~----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~  182 (381)
                      +|.-..|.                                              .-.....||-+|.+|-++..++....
T Consensus       261 ~vP~l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~  340 (565)
T KOG1236|consen  261 NVPDLSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKS  340 (565)
T ss_pred             hcCccccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhccc
Confidence            22222221                                              01123467888999999999998754


Q ss_pred             CCC----------ccchH-------HHHHHhhhcceeecccC
Q 016850          183 NPS----------FTVLS-------TWLSRMQSSSIIVSEEN  207 (381)
Q Consensus       183 ~~~----------~~~~~-------~~~~~l~~~Nill~~~~  207 (381)
                      ...          ..++.       ..|.|+||.||++.-.+
T Consensus       341 ~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  341 QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            432          00000       12457889998887654

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=92.47  E-value=0.37  Score=43.93  Aligned_cols=73  Identities=7%  Similarity=0.057  Sum_probs=49.2

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ...|+.|....+|+....++.+.||.-.   ......|..|.+-|+.|.   --.+.+++++....+..+|||||++.+
T Consensus        22 ~~~v~GG~i~~a~~~~~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   22 IEPVSGGDINEAYRLDTDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             EEEE--SSSSEEEEEETTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             eEecCCCChhheEEEECCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            3568889999999999889999999754   333467888998888883   446889999888777779999999866

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=91.99  E-value=1.2  Score=39.48  Aligned_cols=116  Identities=12%  Similarity=0.088  Sum_probs=67.9

Q ss_pred             ccccCCCceEEEEEE-CCceEEEEEecccccc-------------------cHHH-----HHHHHHHHhhc--CCCCcce
Q 016850           99 KFTSSSASASWRGTI-RGKDVIIFQRKLRRSL-------------------DLEQ-----LRERLSVICRS--HHSSLIK  151 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~-~~~~v~vk~~~~~~~~-------------------~~~~-----~~~E~~il~~l--~h~nIv~  151 (381)
                      .|..|-=+.||+|.. .+..+|+|+.+.....                   +..+     ..+|+.-|+++  -+-.+.+
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            344666788999886 4889999987653221                   1111     24677778877  3455566


Q ss_pred             EEEEEEeCCeeeEEEeccCCC-CHHHHhcCCCCCC------ccchH-----------HHHHHhhhcceeecccCCCccce
Q 016850          152 LLGACVSGNCGYLVYEHVSGA-NLADCLRNPRNPS------FTVLS-----------TWLSRMQSSSIIVSEENAGSLCA  213 (381)
Q Consensus       152 l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~------~~~~~-----------~~~~~l~~~Nill~~~~~~~~~~  213 (381)
                      -+++..    -.|||||+... .-.-.|++-....      ..++.           ..|.||..=|||++++     .+
T Consensus       135 Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~-----~p  205 (268)
T COG1718         135 PIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDG-----EP  205 (268)
T ss_pred             ceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECC-----eE
Confidence            666532    36999999432 1112222222111      11111           2234566789999954     38


Q ss_pred             EEcccccccc
Q 016850          214 KICHFGTAEL  223 (381)
Q Consensus       214 kl~DFG~a~~  223 (381)
                      .|+|||-|..
T Consensus       206 ~iID~~QaV~  215 (268)
T COG1718         206 YIIDVSQAVT  215 (268)
T ss_pred             EEEECccccc
Confidence            9999997754

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=90.85  E-value=0.78  Score=40.24  Aligned_cols=95  Identities=17%  Similarity=0.184  Sum_probs=57.4

Q ss_pred             cccccCCCceEEEEEEC---CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           98 KKFTSSSASASWRGTIR---GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      +.|..|-...+|+....   ++.+++|+...... ..-...+|+.++..+. +.-.+++++.+.  +  .+||||++|-+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCCCc
Confidence            45777888899999876   46787776433221 1233457999999884 334555555432  2  38999999877


Q ss_pred             HHHHhcCCCCCCccchHHHHHHhhh
Q 016850          174 LADCLRNPRNPSFTVLSTWLSRMQS  198 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~~~l~~  198 (381)
                      |...... .......+...+.+||.
T Consensus        79 l~~~~~~-~~~~~~~la~~l~~lH~  102 (235)
T cd05157          79 LEPEDLR-NPKIYRLIARELAKLHS  102 (235)
T ss_pred             CCHHHcc-ChHHHHHHHHHHHHHhc
Confidence            6543221 11123345556666763

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.15  E-value=1.2  Score=38.91  Aligned_cols=75  Identities=13%  Similarity=0.178  Sum_probs=55.8

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc---CCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS---HHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      +.+-.|.--..|+..+...++.+|.   ........|..|+.-|..|   +--++.+++.+-.+.++-|+||||++.|.+
T Consensus        22 ~~v~gG~inea~~v~dg~~~~FvK~---n~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          22 EEVSGGDINEAWRLRDGTDPFFVKC---NQREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             cccCCccccceeEeecCCcceEEEe---cchhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            3455566666788877788888885   2222346788888887777   345688888888889999999999998776


Q ss_pred             H
Q 016850          175 A  175 (381)
Q Consensus       175 ~  175 (381)
                      .
T Consensus        99 d   99 (286)
T COG3001          99 D   99 (286)
T ss_pred             C
Confidence            5

>PLN02236 choline kinase

Probab=88.20  E-value=2.6  Score=39.63  Aligned_cols=74  Identities=14%  Similarity=0.134  Sum_probs=45.9

Q ss_pred             ccccccCCCceEEEEEEC------CceEEEEEecccccccHHHHHHHHHHHhhcCCCC-cceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSS-LIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ...|-.|-.-.+|+....      ++.+++++.......-. ...+|+.++..+..-+ -.++++.+.++    .|+||+
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi  115 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFI  115 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc----eEEEee
Confidence            345656778899998763      24677766433222222 2377999998884333 34566665433    589999


Q ss_pred             CCCCHH
Q 016850          170 SGANLA  175 (381)
Q Consensus       170 ~~gsL~  175 (381)
                      ++.+|.
T Consensus       116 ~g~~l~  121 (344)
T PLN02236        116 HARTLS  121 (344)
T ss_pred             CCCCCC
Confidence            776663

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=87.84  E-value=2.6  Score=39.23  Aligned_cols=70  Identities=13%  Similarity=0.127  Sum_probs=46.3

Q ss_pred             CCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCC---CC---cceEEEEEE--eCC--eeeEEEeccCCCC
Q 016850          104 SASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHH---SS---LIKLLGACV--SGN--CGYLVYEHVSGAN  173 (381)
Q Consensus       104 ~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h---~n---Iv~l~~~~~--~~~--~~~lv~e~~~~gs  173 (381)
                      .-..||+....++.+++|+....  ....++..|.+.|..|.-   +=   |..+=|-..  -..  ..+-|++|++|..
T Consensus        37 ~eN~~f~~~~~~g~~iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~  114 (331)
T COG2334          37 EENSNFRVQTEDGRYILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRP  114 (331)
T ss_pred             ccCceEEEEecCCCeEEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCcC
Confidence            45678999998888877775443  567888889999988832   11   122211110  123  6778999999887


Q ss_pred             HH
Q 016850          174 LA  175 (381)
Q Consensus       174 L~  175 (381)
                      +.
T Consensus       115 ~~  116 (331)
T COG2334         115 LE  116 (331)
T ss_pred             cC
Confidence            77

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=87.55  E-value=2.8  Score=38.72  Aligned_cols=71  Identities=17%  Similarity=0.236  Sum_probs=43.0

Q ss_pred             ccCCC-ceEEEEEECCceEEEEEecc--cccccHHHHHHHHHHHhhcCC--CCcceEEEEEEeCC--eeeEEEeccCCC
Q 016850          101 TSSSA-SASWRGTIRGKDVIIFQRKL--RRSLDLEQLRERLSVICRSHH--SSLIKLLGACVSGN--CGYLVYEHVSGA  172 (381)
Q Consensus       101 g~G~~-g~V~~~~~~~~~v~vk~~~~--~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~--~~~lv~e~~~~g  172 (381)
                      +.||+ -.+|.....++++++- +-.  .......+..+|+.+|+.+.-  .-+...+++|.++.  ..+.||+|++|.
T Consensus        33 ~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe  110 (321)
T COG3173          33 ISGGWSNDTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGE  110 (321)
T ss_pred             ccCCcccceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecce
Confidence            34444 3345554456666665 211  112245667788888888742  33455677777665  679999999873

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=86.54  E-value=2.7  Score=39.17  Aligned_cols=73  Identities=11%  Similarity=0.150  Sum_probs=45.3

Q ss_pred             ccccccCCCceEEEEEECCc-----eEEEEEecccccccHHHHHHHHHHHhhcCCCCc-ceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIRGK-----DVIIFQRKLRRSLDLEQLRERLSVICRSHHSSL-IKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~-----~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.|..|=...+|+....+.     .|++++...... ..-...+|+.+++.+..-++ .++++++. ++   +|.+|++
T Consensus        19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~   93 (330)
T PLN02421         19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFIN   93 (330)
T ss_pred             EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeC-Cc---Eeehhhc
Confidence            45565677788999876542     677766433222 22234678999998854444 46666653 22   5899997


Q ss_pred             CCCH
Q 016850          171 GANL  174 (381)
Q Consensus       171 ~gsL  174 (381)
                      +-.|
T Consensus        94 g~~l   97 (330)
T PLN02421         94 ARTL   97 (330)
T ss_pred             CCCC
Confidence            6655

>PHA00451 protein kinase

Probab=85.00  E-value=0.72  Score=40.72  Aligned_cols=67  Identities=12%  Similarity=0.169  Sum_probs=41.6

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc--CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS--HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l--~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..||.|.|+.+|.-..-.+.| ||+-..+.+....     .....++  -.+.|..+|.+-...+++.+|++++.
T Consensus        71 ~~LGNGHFSAAy~H~lLPgrV-IKVGFKKEDSGAA-----YtAFCRM~QGR~GIPnVY~VaRHaGCYTVVLD~L~  139 (362)
T PHA00451         71 NLLGNGHFSAAYSHELLPGRV-IKVGFKKEDSGAA-----YTAFCRMHQGRAGIPNVYHVARHAGCYTVVLDYLN  139 (362)
T ss_pred             HHhcCcchhhHhhcccCCCee-EEeccccccccHH-----HHHHHHHhcCCCCCccHHHHHHhcCceEEehhhcc
Confidence            568999999999876543333 4443233333221     1223333  36778888877777788888888864

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=81.72  E-value=3.4  Score=37.79  Aligned_cols=96  Identities=14%  Similarity=0.103  Sum_probs=57.4

Q ss_pred             cccccCCCceEEEEEECC--------ceEEEEEecccccccHHHHHHHHHHHhhcCCCC-cceEEEEEEeCCeeeEEEec
Q 016850           98 KKFTSSSASASWRGTIRG--------KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSS-LIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~--------~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~lv~e~  168 (381)
                      +.|..|-...||+....+        +.+++++..... ....+..+|++++..+.... ..++++++.+    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            345667777899988753        677777743322 23356788999998884322 4456665532    368999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHHHHHHhhhc
Q 016850          169 VSGANLADCLRNPRNPSFTVLSTWLSRMQSS  199 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~~~~~l~~~  199 (381)
                      ++|..+...... ......++...+++||..
T Consensus        79 i~G~~l~~~~~~-~~~~~~~ia~~L~~lH~~  108 (302)
T cd05156          79 IPSRTLTTEELR-DPDISAEIARRMAKLHSI  108 (302)
T ss_pred             eCCCcCCHhHcC-CcHHHHHHHHHHHHhhCC
Confidence            998777653211 111233445555666643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG3021 consensus Predicted kinase [General function prediction only]

Probab=80.49  E-value=7.3  Score=33.85  Aligned_cols=78  Identities=13%  Similarity=0.164  Sum_probs=52.6

Q ss_pred             ccccccCCCceEEEEEE---CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcc---eEEEEEEe-CCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTI---RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLI---KLLGACVS-GNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~---~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv---~l~~~~~~-~~~~~lv~e~~  169 (381)
                      .+.+|.-+-|.+-.|++   +.+.|.||.-+   ...++.|.-|+.-|..++..+.|   +-+.+..- ++..+|||||+
T Consensus        14 vr~~gs~gggcI~~~r~ydtDaG~~FvK~nr---~~~~~mfeGE~~sLeAi~sT~tv~vprpikvid~p~Ggs~lime~i   90 (313)
T KOG3021|consen   14 VRALGSVGGGCISDGRHYDTDAGKVFVKVNR---SIARDMFEGELASLEAIQSTETVLVPRPIKVIDLPGGGSSLIMEHI   90 (313)
T ss_pred             eeeecCCCCceeccccccccCCccEEEEecc---ccchHHHhhHHHHHHHHHhcCceecCCceeeEecCCCceeeeeehh
Confidence            45667655566766654   35677777622   25677888999888888666544   34555554 56688999999


Q ss_pred             CCCCHHHH
Q 016850          170 SGANLADC  177 (381)
Q Consensus       170 ~~gsL~~~  177 (381)
                      +-+.|...
T Consensus        91 df~~lr~~   98 (313)
T KOG3021|consen   91 DFQGLRSD   98 (313)
T ss_pred             hcccchhH
Confidence            87766543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	381
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		9e-11
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-10
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		5e-08
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		9e-08
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-07
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-07
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-07
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-06
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-06
1fvr_A	327	Tie2 Kinase Domain Length = 327		9e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		3e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		4e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		4e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-04

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 128/310 (41%), Gaps = 51/310 (16%)
Query: 81  HIYHLSEICAATNNFLAK-------KFTXXXXXXXWRGTIRGKDVIIFQRKLRRSLDL-- 131
           H +   E+   TNNF  +       K         ++G +    V +  +KL   +D+  
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITT 70
Query: 132 ----EQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD---CLRN---- 180
               +Q  + + V+ +  H +L++LLG    G+   LVY ++   +L D   CL      
Sbjct: 71  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 181 ------------PRNPSFTVLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEV 227
                           +F   +  + R ++S++I++ E    +  AKI  FG A    + 
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE----AFTAKISDFGLARASEKF 186
Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGID 287
           +  ++   ++I GT  YMAPE    G +T K D+Y+F                     +D
Sbjct: 187 A--QTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL--------PAVD 235
Query: 288 GYRRVSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
            +R   ++    E           ++D+++ D+    V E M  +  QC+ E   KRPD+
Sbjct: 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDI 294
Query: 348 RQVTGLVSKM 357
           ++V  L+ +M
Sbjct: 295 KKVQQLLQEM 304

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 127/310 (40%), Gaps = 51/310 (16%)
Query: 81  HIYHLSEICAATNNFLAK-------KFTXXXXXXXWRGTIRGKDVIIFQRKLRRSLDL-- 131
           H +   E+   TNNF  +       K         ++G +    V +  +KL   +D+  
Sbjct: 13  HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITT 70
Query: 132 ----EQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD---CLRN---- 180
               +Q  + + V+ +  H +L++LLG    G+   LVY ++   +L D   CL      
Sbjct: 71  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 181 ------------PRNPSFTVLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEV 227
                           +F   +  + R ++S++I++ E    +  AKI  FG A    + 
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE----AFTAKISDFGLARASEKF 186
Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGID 287
           +  ++    +I GT  YMAPE    G +T K D+Y+F                     +D
Sbjct: 187 A--QTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL--------PAVD 235
Query: 288 GYRRVSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
            +R   ++    E           ++D+++ D+    V E M  +  QC+ E   KRPD+
Sbjct: 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDI 294
Query: 348 RQVTGLVSKM 357
           ++V  L+ +M
Sbjct: 295 KKVQQLLQEM 304

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 126/310 (40%), Gaps = 51/310 (16%)
Query: 81  HIYHLSEICAATNNFLAK-------KFTXXXXXXXWRGTIRGKDVIIFQRKLRRSLDL-- 131
           H +   E+   TNNF  +       K         ++G +    V +  +KL   +D+  
Sbjct: 7   HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITT 64
Query: 132 ----EQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD---CLRN---- 180
               +Q  + + V+ +  H +L++LLG    G+   LVY ++   +L D   CL      
Sbjct: 65  EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 181 ------------PRNPSFTVLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEV 227
                           +F   +  + R ++S++I++ E    +  AKI  FG A    + 
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDE----AFTAKISDFGLARASEKF 180
Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGID 287
           +  +     +I GT  YMAPE    G +T K D+Y+F                     +D
Sbjct: 181 A--QXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGL--------PAVD 229
Query: 288 GYRRVSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
            +R   ++    E           ++D+++ D+    V E M  +  QC+ E   KRPD+
Sbjct: 230 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDI 288
Query: 348 RQVTGLVSKM 357
           ++V  L+ +M
Sbjct: 289 KKVQQLLQEM 298

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/333 (20%), Positives = 131/333 (39%), Gaps = 63/333 (18%)
Query: 83  YHLSEICAATNNFLAKK-FTXXXXXXXWRGTIRGKDVIIFQR-KLRRSLDLE-QLRERLS 139
           + L E+  A++NF  K           ++G +    ++  +R K  R    E Q +  + 
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 140 VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSR---- 195
           +I  + H +L++L G C++     LVY +++  ++A CLR    P       W  R    
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPESQPPLDWPKRQRIA 145
Query: 196 ----------------------MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG 233
                                 +++++I++ EE      A +  FG A+L   +   +  
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEE----FEAVVGDFGLAKL---MDYKDXH 198
Query: 234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRRVS 293
               + GT G++APE+ ++G  ++K DV+ +                +  E I G R   
Sbjct: 199 VXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYG--------------VMLLELITGQRAFD 244
Query: 294 VVDKASEXXXX---------XXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR 344
           +   A++                     VD  L+ +Y  E  E+++ + L C    P +R
Sbjct: 245 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 304
Query: 345 PDMRQVTGLVSKMYLESK--NWADKIGFPTDFS 375
           P M +V  ++    L  +   W  +  F  DF+
Sbjct: 305 PKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFN 337

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 60/287 (20%)
Query: 114 RGKDVIIFQ--RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG 171
           R KDV I Q   +  R   + +LR+    + R +H +++KL GAC++  C  LV E+  G
Sbjct: 31  RAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNIVKLYGACLNPVC--LVMEYAEG 84
Query: 172 ANLADCLRNPRN-PSFTVLS------------TWLSRMQSSSII---VSEEN----AGSL 211
            +L + L      P +T                +L  MQ  ++I   +   N    AG  
Sbjct: 85  GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 144
Query: 212 CAKICHFGTA-ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXX 270
             KIC FGTA ++   ++ N        +G+  +MAPE       ++KCDV+++      
Sbjct: 145 VLKICDFGTACDIQTHMTNN--------KGSAAWMAPEVFEGSNYSEKCDVFSW----GI 192
Query: 271 XXXXXXXXKFVFDE-GIDGYRRVSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKM 329
                   +  FDE G   +R +  V   +          R  + + L    P+E     
Sbjct: 193 ILWEVITRRKPFDEIGGPAFRIMWAVHNGT----------RPPLIKNLPK--PIES---- 236
Query: 330 VLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSV 376
             L  +C  +DP +RP M ++  +++ +        + + +P   S+
Sbjct: 237 --LMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSL 281

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 119/287 (41%), Gaps = 60/287 (20%)
Query: 114 RGKDVIIFQ--RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG 171
           R KDV I Q   +  R   + +LR+    + R +H +++KL GAC++  C  LV E+  G
Sbjct: 30  RAKDVAIKQIESESERKAFIVELRQ----LSRVNHPNIVKLYGACLNPVC--LVMEYAEG 83
Query: 172 ANLADCLRNPRN-PSFTVLS------------TWLSRMQSSSII---VSEEN----AGSL 211
            +L + L      P +T                +L  MQ  ++I   +   N    AG  
Sbjct: 84  GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGT 143
Query: 212 CAKICHFGTA-ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXX 270
             KIC FGTA ++   ++ N        +G+  +MAPE       ++KCDV+++      
Sbjct: 144 VLKICDFGTACDIQTHMTNN--------KGSAAWMAPEVFEGSNYSEKCDVFSW----GI 191
Query: 271 XXXXXXXXKFVFDE-GIDGYRRVSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKM 329
                   +  FDE G   +R +  V   +          R  + + L    P+E     
Sbjct: 192 ILWEVITRRKPFDEIGGPAFRIMWAVHNGT----------RPPLIKNLPK--PIES---- 235
Query: 330 VLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFSV 376
             L  +C  +DP +RP M ++  +++ +        + + +P   S+
Sbjct: 236 --LMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSL 280

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/309 (21%), Positives = 121/309 (39%), Gaps = 51/309 (16%)
Query: 81  HIYHLSEICAATNNFLAKKFTXXXXX-------XXWRGTIRGKDVIIFQRKLRRSLDL-- 131
           H +   E+   TNNF  +  +              ++G +    V +  +KL   +D+  
Sbjct: 4   HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAV--KKLAAMVDITT 61
Query: 132 ----EQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD---CLRN---- 180
               +Q  + + V  +  H +L++LLG    G+   LVY +    +L D   CL      
Sbjct: 62  EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 181 ------------PRNPSFTVLSTWLSR-MQSSSIIVSEENAGSLCAKICHFGTAELCGEV 227
                           +F   +  + R ++S++I++ E    +  AKI  FG A    + 
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDE----AFTAKISDFGLARASEKF 177
Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGID 287
           +  +    ++I GT  Y APE    G +T K D+Y+F                     +D
Sbjct: 178 A--QXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGL--------PAVD 226
Query: 288 GYRRVSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
            +R   ++    E           ++D++  D+    V E    +  QC+ E   KRPD+
Sbjct: 227 EHREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSV-EAXYSVASQCLHEKKNKRPDI 285
Query: 348 RQVTGLVSK 356
           ++V  L+ +
Sbjct: 286 KKVQQLLQE 294

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/311 (20%), Positives = 123/311 (39%), Gaps = 61/311 (19%)
Query: 83  YHLSEICAATNNFLAKK-FTXXXXXXXWRGTIRGKDVIIFQR-KLRRSLDLE-QLRERLS 139
           + L E+  A++NF  K           ++G +    ++  +R K  R+   E Q +  + 
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 140 VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSR---- 195
           +I  + H +L++L G C++     LVY +++  ++A CLR    P       W  R    
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE--RPESQPPLDWPKRQRIA 137
Query: 196 ----------------------MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG 233
                                 +++++I++ EE      A +  FG A+L   +   +  
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEE----FEAVVGDFGLAKL---MDYKDXH 190
Query: 234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRRVS 293
               + G  G++APE+ ++G  ++K DV+ +                +  E I G R   
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYG--------------VMLLELITGQRAFD 236
Query: 294 VVDKASEXXXX---------XXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR 344
           +   A++                     VD  L+ +Y  E  E+++ + L C    P +R
Sbjct: 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 345 PDMRQVTGLVS 355
           P M +V  ++ 
Sbjct: 297 PKMSEVVRMLE 307

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 31/204 (15%)
Query: 85  LSEICAATNNFLAKKFTXXXXX-XXWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVIC 142
           L ++  ATNNF  K           ++G +R G  V + +R    S  +E+    +  + 
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 143 RSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ----- 197
              H  L+ L+G C   N   L+Y+++   NL   L     P+ ++  +W  R++     
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM--SWEQRLEICIGA 148
Query: 198 -----------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEG 240
                             S  I+ +EN      KI  FG ++   E+       V  ++G
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDEN---FVPKITDFGISKKGTELDQTHLXXV--VKG 203
Query: 241 TRGYMAPEFQASGVVTQKCDVYAF 264
           T GY+ PE+   G +T+K DVY+F
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSF 227

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 37/207 (17%)
Query: 85  LSEICAATNNFLAKKFTXXXXX-XXWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVIC 142
           L ++  ATNNF  K           ++G +R G  V + +R    S  +E+    +  + 
Sbjct: 31  LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 143 RSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ----- 197
              H  L+ L+G C   N   L+Y+++   NL   L     P+ ++  +W  R++     
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSM--SWEQRLEICIGA 148
Query: 198 -----------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK--- 237
                             S  I+ +EN      KI  FG ++      G E G+ +    
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDEN---FVPKITDFGISK-----KGTELGQTHLXXV 200
Query: 238 IEGTRGYMAPEFQASGVVTQKCDVYAF 264
           ++GT GY+ PE+   G +T+K DVY+F
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSF 227

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 138 LSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR----NPSFTVLSTW 192
           L V+C+  HH ++I LLGAC      YL  E+    NL D LR  R    +P+F + ++ 
Sbjct: 76  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 135
Query: 193 LSRMQSSSII 202
            S + S  ++
Sbjct: 136 ASTLSSQQLL 145

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 138 LSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR----NPSFTVLSTW 192
           L V+C+  HH ++I LLGAC      YL  E+    NL D LR  R    +P+F + ++ 
Sbjct: 66  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 125
Query: 193 LSRMQSSSII 202
            S + S  ++
Sbjct: 126 ASTLSSQQLL 135

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 138 LSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR----NPSFTVLSTW 192
           L V+C+  HH ++I LLGAC      YL  E+    NL D LR  R    +P+F + ++ 
Sbjct: 73  LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 132
Query: 193 LSRMQSSSII 202
            S + S  ++
Sbjct: 133 ASTLSSQQLL 142

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 98/250 (39%), Gaps = 42/250 (16%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 48  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS 107
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 108 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 167
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFXXXXXXXXXXXXXXKFVFDEGIDGYRR 291
           +G    I+ T    APE  A    + K DV+AF                    GID  + 
Sbjct: 168 AGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----PGIDPSQV 219
Query: 292 VSVVDKASEXXXXXXXXXRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT 351
             +++K                D R++   P    EK+  L   C   +P  RP   ++ 
Sbjct: 220 YELLEK----------------DYRMER--PEGCPEKVYELMRACWQWNPSDRPSFAEIH 261
Query: 352 GLVSKMYLES 361
                M+ ES
Sbjct: 262 QAFETMFQES 271

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 48  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 107
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 108 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 167
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 168 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 196

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 50  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS 109
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 170 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 198

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 50  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVS 109
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 170 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 198

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 50  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 109
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 170 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 198

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 55  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 114
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 175 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 203

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 50  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 109
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 170 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 198

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y+V E++   NL D LR  N    +
Sbjct: 69  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVT 128
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 129 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 189 AGAKFPIKWT----APESLAYNTFSIKSDVWAF 217

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 48  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 107
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 108 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAH 167
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 168 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 196

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 55  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 114
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 175 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 203

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 51  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 110
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 111 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 170
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 171 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 199

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 55  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 174
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 175 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 203

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 50  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 109
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 170 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 198

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 55  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 175 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 203

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 54  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 113
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 114 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 174 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 202

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 50  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 109
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 110 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 170 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 198

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 63  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 122
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 123 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 182
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 183 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 211

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 52  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 112 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 172 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 200

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 55  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 114
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 175 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 203

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 52  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 112 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 172 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 200

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 51  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 110
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 111 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 170
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 171 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 199

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  +
Sbjct: 52  TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 111
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 112 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 171
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 172 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 200

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 128 SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR--NPRNPS 185
           ++++E+  +  +V+    H +L++LLG C      Y++ E ++  NL D LR  N +  S
Sbjct: 257 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVS 316
Query: 186 FTVLSTWLSRMQSSSIIVSEEN------AGSLC-------AKICHFGTAEL-CGEVSGNE 231
             VL    +++ S+   + ++N      A   C        K+  FG + L  G+     
Sbjct: 317 AVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376
Query: 232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           +G    I+ T    APE  A    + K DV+AF
Sbjct: 377 AGAKFPIKWT----APESLAYNKFSIKSDVWAF 405

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	381
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-39
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-39
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-35
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-32
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-25
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-24
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-22
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-22
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-22
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-21
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-20
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-20
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-20
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-20
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-19
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-18
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-10
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-10
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-10
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	6e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	9e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-08
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-08
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	3e-08
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-08
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	5e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	5e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-08
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-08
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-07
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-07
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	5e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-07
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	7e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	7e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	7e-07
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-07
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-06
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-06
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	3e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-06
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	4e-06
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-06
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	7e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-06
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-05
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	6e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	9e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-04
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-04
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  142 bits (360), Expect = 2e-39
 Identities = 68/309 (22%), Positives = 133/309 (43%), Gaps = 59/309 (19%)

Query: 79  NPHIYHLSEICAATNNFLAKKFTSSSAS--------ASWRGTIR-GKDVIIFQRKLRRS- 128
               + L E+  A++NF       S+ +          ++G +  G  V + + K  R+ 
Sbjct: 16  QLKRFSLRELQVASDNF-------SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ 68

Query: 129 -LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFT 187
             +L+   E + +I  + H +L++L G C++     LVY +++  ++A CLR        
Sbjct: 69  GGELQFQTE-VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPP 127

Query: 188 VLSTWLSRMQ--------------------------SSSIIVSEENAGSLCAKICHFGTA 221
           +   W  R +                          +++I++ EE      A +  FG A
Sbjct: 128 L--DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE----FEAVVGDFGLA 181

Query: 222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFV 281
           +L       ++     + GT G++APE+ ++G  ++K DV+ +GV++LEL++G+      
Sbjct: 182 KLMDY---KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238

Query: 282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP 341
                D    V ++D     +      +   VD  L+ +Y  E  E+++ + L C    P
Sbjct: 239 RLANDDD---VMLLDWVKGLLKE--KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSP 293

Query: 342 GKRPDMRQV 350
            +RP M +V
Sbjct: 294 MERPKMSEV 302

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  140 bits (356), Expect = 5e-39
 Identities = 76/336 (22%), Positives = 129/336 (38%), Gaps = 74/336 (22%)

Query: 57  SNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATNNFLAKKFTSSSASASW------- 109
           S  S   NS +   +    +P   +   L ++  ATNNF             +       
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNF----------DHKFLIGHGVF 52

Query: 110 ----RGTIR-GKDVIIFQRKLRRSLDLEQ-LRERLS---VICRSHHSSLIKLLGACVSGN 160
               +G +R G  V +   K RR+ +  Q + E  +    +    H  L+ L+G C   N
Sbjct: 53  GKVYKGVLRDGAKVAL---K-RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108

Query: 161 CGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ----------------------- 197
              L+Y+++   NL   L     P+ ++  +W  R++                       
Sbjct: 109 EMILIYKYMENGNLKRHLYGSDLPTMSM--SWEQRLEICIGAARGLHYLHTRAIIHRDVK 166

Query: 198 SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN---KIEGTRGYMAPEFQASGV 254
           S +I++ E        KI  FG ++      G E  + +    ++GT GY+ PE+   G 
Sbjct: 167 SINILLDEN----FVPKITDFGISKK-----GTELDQTHLSTVVKGTLGYIDPEYFIKGR 217

Query: 255 VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD 314
           +T+K DVY+FGVV+ E+L     +             V++ + A E+     G + + VD
Sbjct: 218 LTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-----MVNLAEWAVESHNN--GQLEQIVD 270

Query: 315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
             L D    E   K     ++C+      RP M  V
Sbjct: 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  131 bits (331), Expect = 1e-35
 Identities = 69/312 (22%), Positives = 121/312 (38%), Gaps = 65/312 (20%)

Query: 79  NPHIYHLSEICAATNNFLAKKFTSSSASASW-------------RGTIRGKDVIIFQRKL 125
             H +   E+   TNNF           +               +G +    V + +   
Sbjct: 11  RFHSFSFYELKNVTNNF------DERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAA 64

Query: 126 RRSLDLEQ-LRERLS---VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNP 181
              +  E+  ++      V+ +  H +L++LLG    G+   LVY ++   +L D L   
Sbjct: 65  MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124

Query: 182 RNPSFTVLSTWLSRMQ-----------------------SSSIIVSEENAGSLCAKICHF 218
                  LS W  R +                       S++I++ E       AKI  F
Sbjct: 125 DGTP--PLS-WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA----FTAKISDF 177

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVL 278
           G A    +    ++   ++I GT  YMAPE    G +T K D+Y+FGVV+LE+++G   +
Sbjct: 178 GLARASEK--FAQTVMTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAV 234

Query: 279 KFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVD 338
               +          ++D   E        +  ++D+++ D       E M  +  QC+ 
Sbjct: 235 DEHREP-------QLLLDIKEEIEDEE-KTIEDYIDKKMND-ADSTSVEAMYSVASQCLH 285

Query: 339 EDPGKRPDMRQV 350
           E   KRPD+++V
Sbjct: 286 EKKNKRPDIKKV 297

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  122 bits (308), Expect = 4e-32
 Identities = 54/318 (16%), Positives = 97/318 (30%), Gaps = 62/318 (19%)

Query: 85  LSEICAATNNF-LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRER-LSVIC 142
              +   +    L +          W+  +  + V +  +            E  +  + 
Sbjct: 16  TENLYFQSMPLQLLEVKARGRFGCVWKAQLLNEYVAV--KIFPIQDKQSWQNEYEVYSLP 73

Query: 143 RSHHSSLIKLLGACVSGNCG----YLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ- 197
              H ++++ +GA   G       +L+       +L+D L+        V+S W      
Sbjct: 74  GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVS-WNELCHI 126

Query: 198 --------------------------------SSSIIVSEENAGSLCAKICHFGTAELCG 225
                                           S ++++       L A I  FG A    
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN----LTACIADFGLALKFE 182

Query: 226 EVSGNESGKVNKIEGTRGYMAPE-----FQASGVVTQKCDVYAFGVVVLELLSGEEVLKF 280
             +G  +G  +   GTR YMAPE              + D+YA G+V+ EL S       
Sbjct: 183 --AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240

Query: 281 VFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY-PVEVAEKMVLLGLQCVDE 339
             DE +  +        + E +   V  V K     L+D +        +     +C D 
Sbjct: 241 PVDEYMLPFEEEIGQHPSLEDMQEVV--VHKKKRPVLRDYWQKHAGMAMLCETIEECWDH 298

Query: 340 DPGKRPDMRQVTGLVSKM 357
           D   R     V   +++M
Sbjct: 299 DAEARLSAGCVGERITQM 316

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  102 bits (256), Expect = 3e-25
 Identities = 61/280 (21%), Positives = 97/280 (34%), Gaps = 63/280 (22%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLD------LEQLRERLSVICRSHHSSLIKLLGACVSGNCG 162
           +R    G +V +  +  R   D      +E +R+   +     H ++I L G C+     
Sbjct: 24  YRAFWIGDEVAV--KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81

Query: 163 YLVYEHVSGANLADCLRNPRNPSFTVLS---------TWLSRMQSSSII----------- 202
            LV E   G  L   L   R P   +++          +L       II           
Sbjct: 82  CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141

Query: 203 ---VSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKC 259
              V   +  +   KI  FG A         +        G   +MAPE   + + ++  
Sbjct: 142 LQKVENGDLSNKILKITDFGLA--REWHRTTKMSAA----GAYAWMAPEVIRASMFSKGS 195

Query: 260 DVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLK- 318
           DV+++GV++ ELL+GE         GIDG            AVA GV          L  
Sbjct: 196 DVWSYGVLLWELLTGEVPF-----RGIDGL-----------AVAYGVA----MNKLALPI 235

Query: 319 -DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
             + P   A+ M      C + DP  RP    +   ++ +
Sbjct: 236 PSTCPEPFAKLM----EDCWNPDPHSRPSFTNILDQLTTI 271

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 99.3 bits (248), Expect = 7e-24
 Identities = 54/288 (18%), Positives = 111/288 (38%), Gaps = 62/288 (21%)

Query: 95  FLAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLG 154
            + +     +     +   R KDV I  +++    + +     L  + R +H +++KL G
Sbjct: 11  EVEEVVGRGAFGVVCKAKWRAKDVAI--KQIESESERKAFIVELRQLSRVNHPNIVKLYG 68

Query: 155 ACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLST-------------WLSRMQSSSI 201
           AC++  C  LV E+  G +L + L       +   +              +L  MQ  ++
Sbjct: 69  ACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126

Query: 202 I----------VSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQA 251
           I          +          KIC FGT       + +    +   +G+  +MAPE   
Sbjct: 127 IHRDLKPPNLLLVAGG---TVLKICDFGT-------ACDIQTHMTNNKGSAAWMAPEVFE 176

Query: 252 SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK 311
               ++KCDV+++G+++ E+++  +     FDE          +   +  +   V     
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRK----PFDE----------IGGPAFRIMWAVHN--- 219

Query: 312 WVDRRLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
               R     + P  +   M     +C  +DP +RP M ++  +++ +
Sbjct: 220 --GTRPPLIKNLPKPIESLMT----RCWSKDPSQRPSMEEIVKIMTHL 261

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 95.5 bits (238), Expect = 2e-22
 Identities = 51/274 (18%), Positives = 101/274 (36%), Gaps = 56/274 (20%)

Query: 109 WRGTIRGKDV---IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV 165
            R    G DV   I+ ++       + +    ++++ R  H +++  +GA        +V
Sbjct: 54  HRAEWHGSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112

Query: 166 YEHVSGANLADCLRNPRNP---SFTVLSTW---LSR-MQ---------------SSSIIV 203
            E++S  +L   L               +    +++ M                S +++V
Sbjct: 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172

Query: 204 SEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYA 263
            ++       K+C FG +    + S   S K     GT  +MAPE        +K DVY+
Sbjct: 173 DKK----YTVKVCDFGLS--RLKASTFLSSKSAA--GTPEWMAPEVLRDEPSNEKSDVYS 224

Query: 264 FGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPV 323
           FGV++ EL + ++   +     ++              V   VG    +  +RL    P 
Sbjct: 225 FGVILWELATLQQP--W---GNLNPA-----------QVVAAVG----FKCKRL--EIPR 262

Query: 324 EVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
            +  ++  +   C   +P KRP    +  L+  +
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 94.7 bits (236), Expect = 2e-22
 Identities = 47/275 (17%), Positives = 94/275 (34%), Gaps = 61/275 (22%)

Query: 109 WRGT--IRGKDVII-------FQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG 159
            +G        V I        + +       ++ +  + ++   +H +++KL G   + 
Sbjct: 36  HKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95

Query: 160 NCGYLVYEHVSGANLADCLRNPRNP-SFTVLSTW---LSR-MQ---------------SS 199
               +V E V   +L   L +  +P  ++V       ++  ++               S 
Sbjct: 96  PR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSP 153

Query: 200 SIIVSEENA-GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE--FQASGVVT 256
           +I +   +    +CAK+  FG       +S      V+ + G   +MAPE         T
Sbjct: 154 NIFLQSLDENAPVCAKVADFG-------LSQQSVHSVSGLLGNFQWMAPETIGAEEESYT 206

Query: 257 QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR 316
           +K D Y+F +++  +L+GE      FDE                     +         R
Sbjct: 207 EKADTYSFAMILYTILTGEG----PFDE----------YSYGKIKFINMIR----EEGLR 248

Query: 317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT 351
              + P +   ++  +   C   DP KRP    + 
Sbjct: 249 P--TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIV 281

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 94.3 bits (235), Expect = 3e-22
 Identities = 53/268 (19%), Positives = 106/268 (39%), Gaps = 55/268 (20%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLD----LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYL 164
           ++G   G DV +  + L  +      L+  +  + V+ ++ H +++  +G   +     +
Sbjct: 41  YKGKWHG-DVAV--KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL-AI 96

Query: 165 VYEHVSGANLADCLRNPRNP-SFTVLSTW---LSR-MQ---SSSII----------VSEE 206
           V +   G++L   L           L       +R M    + SII          + E+
Sbjct: 97  VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED 156

Query: 207 NAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE---FQASGVVTQKCDVYA 263
           N      KI  FG A    +   + S +  ++ G+  +MAPE    Q S   + + DVYA
Sbjct: 157 N----TVKIGDFGLA--TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYA 210

Query: 264 FGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG-GVRKWVDRRLKDSYP 322
           FG+V+ EL++G+             Y  ++      + +   VG G       +++ + P
Sbjct: 211 FGIVLYELMTGQL-----------PYSNIN----NRDQIIEMVGRGSLSPDLSKVRSNCP 255

Query: 323 VEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
             +   M     +C+ +   +RP   ++
Sbjct: 256 KRMKRLM----AECLKKKRDERPSFPRI 279

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 45/295 (15%), Positives = 97/295 (32%), Gaps = 71/295 (24%)

Query: 95  FLAKKFTSSSASASWRGTIRGKDVII--FQRKLRRSLDLEQLRERLSVICRSHHSSLIKL 152
               K   + +   W+G  +G D+++   + +   +       E    +    H +++ +
Sbjct: 13  NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72

Query: 153 LGACVSGNCGYL--VYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQ------------- 197
           LGAC S    +   +   +   +L + L    N            ++             
Sbjct: 73  LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD----QSQAVKFALDMARGMAFLH 128

Query: 198 ------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYM 245
                       S S+++ E+    + A+I            S    G++        ++
Sbjct: 129 TLEPLIPRHALNSRSVMIDED----MTARISMADVKF-----SFQSPGRM----YAPAWV 175

Query: 246 APEF---QASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV 302
           APE    +      +  D+++F V++ EL++ E     V    +               +
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTRE-----VPFADLSNM-----------EI 219

Query: 303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
              V         R   + P  ++  +  L   C++EDP KRP    +  ++ KM
Sbjct: 220 GMKVA----LEGLRP--TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 90.3 bits (224), Expect = 2e-20
 Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 68/308 (22%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSV--ICRSHHSSLIKLLGACVSGNCG---- 162
           ++G++  + V +   K+    + +      ++  +    H ++ + +             
Sbjct: 30  YKGSLDERPVAV---KVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86

Query: 163 -YLVYEHVSGANLADCLRNPRNPSFTVLSTWLS------------------------R-M 196
             LV E+    +L   L    +   +      S                        R +
Sbjct: 87  YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146

Query: 197 QSSSIIVSEENAGSLCAKICHFGTA----ELCGEVSGNESGKVNKIEGTRGYMAPE---- 248
            S +++V  +        I  FG +           G E        GT  YMAPE    
Sbjct: 147 NSRNVLVKND----GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202

Query: 249 ---FQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG 305
               +      ++ D+YA G++  E+      L     E +  Y+       A +   G 
Sbjct: 203 AVNLRDXESALKQVDMYALGLIYWEIFMRCTDL--FPGESVPEYQM------AFQTEVGN 254

Query: 306 ---VGGVRKWVDRR-----LKDSYPV--EVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVS 355
                 ++  V R        +++         +      C D+D   R   +     ++
Sbjct: 255 HPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314

Query: 356 KMYLESKN 363
           ++ +  + 
Sbjct: 315 ELMMIWER 322

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 90.2 bits (224), Expect = 2e-20
 Identities = 50/287 (17%), Positives = 101/287 (35%), Gaps = 49/287 (17%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRER-LSVICRSHHSSLIKLLGACVSGNCG----Y 163
           W G  RG+ V +  +    + +    RE  +       H +++  + A + G       Y
Sbjct: 54  WMGKWRGEKVAV--KVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVL---------------STWLSRMQ---------SS 199
           L+ ++    +L D L++    + ++L                 + ++ +         S 
Sbjct: 112 LITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSK 171

Query: 200 SIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE------FQASG 253
           +I+V +         I   G A      +       N   GT+ YM PE       +   
Sbjct: 172 NILVKKN----GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227

Query: 254 VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG--GVR- 310
                 D+Y+FG+++ E+         V +E    Y  +   D + E +   V    +R 
Sbjct: 228 QSYIMADMYSFGLILWEVARRCVSGGIV-EEYQLPYHDLVPSDPSYEDMREIVCIKKLRP 286

Query: 311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
            + +R   D    ++ + M     +C   +P  R    +V   ++KM
Sbjct: 287 SFPNRWSSDECLRQMGKLMT----ECWAHNPASRLTALRVKKTLAKM 329

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 88.2 bits (219), Expect = 7e-20
 Identities = 43/282 (15%), Positives = 94/282 (33%), Gaps = 64/282 (22%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRER----LSVICRSHHSSLIKLLGACVSGNCGYL 164
           + G   G +V I  R +    D E   +     +    ++ H +++  +GAC+S     +
Sbjct: 50  YHGRWHG-EVAI--RLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106

Query: 165 VYEHVSGANLADCLRNPRNP-SFTVLSTW---LSR-MQ---SSSII----------VSEE 206
           +     G  L   +R+ +              + + M    +  I+              
Sbjct: 107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG 166

Query: 207 NAGSLCAKICHFGTA-ELCGEVSGNESGKVNKIEGTRGYMAPE---------FQASGVVT 256
                   I  FG         +G    K+    G   ++APE          +     +
Sbjct: 167 KV-----VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221

Query: 257 QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG-GVRKWVDR 315
           +  DV+A G +  EL + E             ++        +EA+   +G G++  +  
Sbjct: 222 KHSDVFALGTIWYELHAREW-----------PFKTQP-----AEAIIWQMGTGMKPNL-- 263

Query: 316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
             +     E+++ +    L C   +  +RP   ++  ++ K+
Sbjct: 264 -SQIGMGKEISDIL----LFCWAFEQEERPTFTKLMDMLEKL 300

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 87.4 bits (217), Expect = 1e-19
 Identities = 51/287 (17%), Positives = 104/287 (36%), Gaps = 49/287 (17%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRER-LSVICRSHHSSLIKLLGACVSGNCG----Y 163
           WRG+ +G++V +  +      +    RE  L       H +++  + + ++        +
Sbjct: 25  WRGSWQGENVAV--KIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------------R-MQSS 199
           L+  +    +L D L+     + + L   LS                       R ++S 
Sbjct: 83  LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142

Query: 200 SIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE------FQASG 253
           +I+V +         I   G A +  + +       N   GT+ YMAPE           
Sbjct: 143 NILVKKN----GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCF 198

Query: 254 VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG--GVR- 310
              ++ D++AFG+V+ E+         V ++    +  V   D + E +   V     R 
Sbjct: 199 DSYKRVDIWAFGLVLWEVARRMVSNGIV-EDYKPPFYDVVPNDPSFEDMRKVVCVDQQRP 257

Query: 311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
              +R   D     +A+ M     +C  ++P  R    ++   ++K+
Sbjct: 258 NIPNRWFSDPTLTSLAKLMK----ECWYQNPSARLTALRIKKTLTKI 300

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 84.7 bits (210), Expect = 1e-18
 Identities = 50/285 (17%), Positives = 96/285 (33%), Gaps = 61/285 (21%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSLDLEQLRERL---SVICRSHHSSLIKLLGACVSGNCGY 163
            + R T  G+ +++   K     D E  R  L    V+    H +++K +G         
Sbjct: 29  VTHRET--GEVMVM---KELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN 83

Query: 164 LVYEHVSGANLADCLRNPRNP-SFTVLS----------TWLSRMQ-------SSSIIVSE 205
            + E++ G  L   +++  +   ++              +L  M        S + +V E
Sbjct: 84  FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRE 143

Query: 206 ENAGSLCAKICHFGTA----------ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV 255
                    +  FG A          E    +   +  K   + G   +MAPE       
Sbjct: 144 NK----NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY 199

Query: 256 TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR 315
            +K DV++FG+V+ E++          D           ++            VR ++DR
Sbjct: 200 DEKVDVFSFGIVLCEIIGRVNA-----DPDYLPRTMDFGLN------------VRGFLDR 242

Query: 316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE 360
               + P           ++C D DP KRP   ++   +  + + 
Sbjct: 243 YCPPNCPPSFFPIT----VRCCDLDPEKRPSFVKLEHWLETLRMH 283

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 83.3 bits (206), Expect = 4e-18
 Identities = 50/288 (17%), Positives = 95/288 (32%), Gaps = 49/288 (17%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRER-LSVICRSHHSSLIKLLGACVSGNCG----Y 163
           WRG  RG++V +  +      +    RE  +       H +++  + A    N      +
Sbjct: 59  WRGKWRGEEVAV--KIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 116

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------------R-MQSS 199
           LV ++    +L D L         ++   LS                       R ++S 
Sbjct: 117 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176

Query: 200 SIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE------FQASG 253
           +I+V +         I   G A      +       N   GT+ YMAPE           
Sbjct: 177 NILVKKN----GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 232

Query: 254 VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG--GVR- 310
              ++ D+YA G+V  E+     +     ++    Y  +   D + E +   V    +R 
Sbjct: 233 ESFKRADIYAMGLVFWEIARRCSIGGIH-EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRP 291

Query: 311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY 358
              +R         +A+ M     +C   +   R    ++   +S++ 
Sbjct: 292 NIPNRWQSCEALRVMAKIMR----ECWYANGAARLTALRIKKTLSQLS 335

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 59/279 (21%), Positives = 104/279 (37%), Gaps = 65/279 (23%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG-YLVYE 167
             G  RG  V +  + ++     +      SV+ +  HS+L++LLG  V    G Y+V E
Sbjct: 210 MLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267

Query: 168 HVSGANLADCLRNPRNPSFTVLS------------TWLSRMQ-------SSSIIVSEENA 208
           +++  +L D LR+                       +L           + +++VSE+N 
Sbjct: 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN- 326

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKV-NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVV 267
               AK+  FG  +     S  ++GK+  K      + APE       + K DV++FG++
Sbjct: 327 ---VAKVSDFGLTKE--ASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGIL 375

Query: 268 VLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSYPV 323
           + E+ S           G   Y R+ + D            V   V++  ++   D  P 
Sbjct: 376 LWEIYS----------FGRVPYPRIPLKD------------VVPRVEKGYKMDAPDGCPP 413

Query: 324 EVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK 362
            V + M      C   D   RP   Q+   +  +     
Sbjct: 414 AVYDVM----KNCWHLDAATRPTFLQLREQLEHIRTHEL 448

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 52/277 (18%), Positives = 109/277 (39%), Gaps = 57/277 (20%)

Query: 109 WRGTIRGKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE 167
           + G  +   + +  + L+  ++++E+  +  +V+    H +L++LLG C      Y++ E
Sbjct: 237 YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296

Query: 168 HVSGANLADCLRNPRNPSFTVLS------------TWLSRMQ-------SSSIIVSEENA 208
            ++  NL D LR       + +              +L +         + + +V E + 
Sbjct: 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENH- 355

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV 268
                K+  FG + L   ++G+        +    + APE  A    + K DV+AFGV++
Sbjct: 356 ---LVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 409

Query: 269 LELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSYPVE 324
            E+ +           G+  Y  + +              V + +++  R++  +  P +
Sbjct: 410 WEIAT----------YGMSPYPGIDLSQ------------VYELLEKDYRMERPEGCPEK 447

Query: 325 VAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES 361
           V E M      C   +P  RP   ++      M+ ES
Sbjct: 448 VYELM----RACWQWNPSDRPSFAEIHQAFETMFQES 480

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 59/282 (20%), Positives = 101/282 (35%), Gaps = 65/282 (23%)

Query: 109 WRGTIRGK-DVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY 166
           W GT  G   V I  + L+  ++  E   +   V+ +  H  L++L     S    Y+V 
Sbjct: 201 WMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVT 257

Query: 167 EHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-------------------IIVSE 205
           E++S  +L D L+        +    L  M  Q +S                   I+V E
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG 265
                   K+  FG A L   +  NE       +    + APE    G  T K DV++FG
Sbjct: 316 NL----VCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 368

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSY 321
           +++ EL +          +G   Y  +   +            V   V+R  R+      
Sbjct: 369 ILLTELTT----------KGRVPYPGMVNRE------------VLDQVERGYRMPCPPEC 406

Query: 322 PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN 363
           P  + + M     QC  ++P +RP    +   +   +  ++ 
Sbjct: 407 PESLHDLM----CQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.9 bits (148), Expect = 2e-10
 Identities = 52/282 (18%), Positives = 105/282 (37%), Gaps = 65/282 (23%)

Query: 109 WRGTIRGK-DVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE 167
           W  T      V +   K   S+ +E      +V+    H  L+KL     +    Y++ E
Sbjct: 205 WMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVV-TKEPIYIITE 262

Query: 168 HVSGANLADCLRNPRNPSFTVLS------------TWLSRMQ-------SSSIIVSEENA 208
            ++  +L D L++       +               ++ +         +++I+VS    
Sbjct: 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL- 321

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRG---YMAPEFQASGVVTQKCDVYAFG 265
                KI  FG A +       E  +    EG +    + APE    G  T K DV++FG
Sbjct: 322 ---VCKIADFGLARVI------EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFG 372

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSY 321
           ++++E+++           G   Y  +S  +            V + ++R  R+   ++ 
Sbjct: 373 ILLMEIVT----------YGRIPYPGMSNPE------------VIRALERGYRMPRPENC 410

Query: 322 PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN 363
           P E+   M    ++C    P +RP    +  ++   Y  +++
Sbjct: 411 PEELYNIM----MRCWKNRPEERPTFEYIQSVLDDFYTATES 448

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 60.3 bits (147), Expect = 3e-10
 Identities = 55/286 (19%), Positives = 101/286 (35%), Gaps = 71/286 (24%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERL---SVICRSHHSSLIKLLGACVSGNCGYLV 165
           + G +R  + ++  +  R +L  +   + L    ++ +  H ++++L+G C      Y+V
Sbjct: 131 FSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190

Query: 166 YEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-------------------IIVS 204
            E V G +    LR        V    L +M   +++                    +V+
Sbjct: 191 MELVQGGDFLTFLRT-EGARLRV--KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT 247

Query: 205 EENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGY----MAPEFQASGVVTQKCD 260
           E+N      KI  FG +           G      G R       APE    G  + + D
Sbjct: 248 EKN----VLKISDFGMSRE------EADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297

Query: 261 VYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR--RLK 318
           V++FG+++ E           F  G   Y  +S                R++V++  RL 
Sbjct: 298 VWSFGILLWE----------TFSLGASPYPNLSNQQ------------TREFVEKGGRLP 335

Query: 319 --DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK 362
             +  P  V   M     QC   +PG+RP    +   +  +    +
Sbjct: 336 CPELCPDAVFRLM----EQCWAYEPGQRPSFSTIYQELQSIRKRHR 377

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 60.5 bits (147), Expect = 3e-10
 Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 42/183 (22%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL---- 174
           +I +R++++  D E L   + ++ +  H +++KL          YLV E  +G  L    
Sbjct: 58  VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117

Query: 175 -----------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSLC 212
                      A  +R        VLS  ++ M  + I+            S+    ++ 
Sbjct: 118 ISRKRFSEVDAARIIR-------QVLSG-ITYMHKNKIVHRDLKPENLLLESKSKDANI- 168

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
            +I  FG +          S K+    GT  Y+APE    G   +KCDV++ GV++  LL
Sbjct: 169 -RIIDFGLSTHF-----EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILL 221

Query: 273 SGE 275
           SG 
Sbjct: 222 SGC 224

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 25/197 (12%), Positives = 50/197 (25%), Gaps = 31/197 (15%)

Query: 108 SWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE 167
                   +  ++  +K     +     + +  +  S     +K   A +  N   LV E
Sbjct: 88  DLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGE 147

Query: 168 HVSGANLADCLRNPRNPSFTVLSTWLSR------------MQSSSII------------- 202
             S   L + +   +N    V+   L              +    II             
Sbjct: 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN 207

Query: 203 ----VSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQK 258
                 +E+  S    +   G +                   T G+   E  ++     +
Sbjct: 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--IFTAKCETSGFQCVEMLSNKPWNYQ 265

Query: 259 CDVYAFGVVVLELLSGE 275
            D +     V  +L G 
Sbjct: 266 IDYFGVAATVYCMLFGT 282

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 59.1 bits (144), Expect = 4e-10
 Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 49/213 (23%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG-YLVYE 167
             G  RG  V +  + ++     +      SV+ +  HS+L++LLG  V    G Y+V E
Sbjct: 38  MLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95

Query: 168 HVSGANLADCLRNPRNPSFTVLS------------TWLSRMQ-------SSSIIVSEENA 208
           +++  +L D LR+                       +L           + +++VSE+N 
Sbjct: 96  YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN- 154

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKV-NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVV 267
               AK+  FG  +     S  ++GK+  K      + APE       + K DV++FG++
Sbjct: 155 ---VAKVSDFGLTKE--ASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGIL 203

Query: 268 VLELLS----------GEEVLKFVFDEGIDGYR 290
           + E+ S           ++V+  V      GY+
Sbjct: 204 LWEIYSFGRVPYPRIPLKDVVPRV----EKGYK 232

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 49/181 (27%)

Query: 145 HHSSLIKLLGACVSGN-CGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS- 200
           +H +++ L+G  +      +++  ++   +L   +R+P+  + TV    L     Q +  
Sbjct: 80  NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKD--LISFGLQVARG 136

Query: 201 ------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR 242
                              ++ E        K+  FG A    ++   E   V +    R
Sbjct: 137 MEYLAEQKFVHRDLAARNCMLDESF----TVKVADFGLAR---DILDREYYSVQQHRHAR 189

Query: 243 ---GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGY 289
               + A E   +   T K DV++FGV++ EL          +   ++  F+      G 
Sbjct: 190 LPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL----AQGR 245

Query: 290 R 290
           R
Sbjct: 246 R 246

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 59/282 (20%), Positives = 101/282 (35%), Gaps = 65/282 (23%)

Query: 109 WRGTIRGK-DVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY 166
           W GT  G   V I  + L+  ++  E   +   V+ +  H  L++L     S    Y+V 
Sbjct: 284 WMGTWNGTTRVAI--KTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVT 340

Query: 167 EHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-------------------IIVSE 205
           E++S  +L D L+        +    L  M  Q +S                   I+V E
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQ--LVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 398

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG 265
                   K+  FG A L   +  NE       +    + APE    G  T K DV++FG
Sbjct: 399 NL----VCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFG 451

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSY 321
           +++ EL +          +G   Y  +   +            V   V+R  R+      
Sbjct: 452 ILLTELTT----------KGRVPYPGMVNRE------------VLDQVERGYRMPCPPEC 489

Query: 322 PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN 363
           P  + + M     QC  ++P +RP    +   +   +  ++ 
Sbjct: 490 PESLHDLM----CQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 38/261 (14%), Positives = 72/261 (27%), Gaps = 93/261 (35%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-- 200
            H  L+   G CV G+   LV E V   +L   L+  +     +L  W   +  Q ++  
Sbjct: 70  SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINIL--WKLEVAKQLAAAM 126

Query: 201 -----------------IIVSEENAG----SLCAKICHFGTAELCGEVSGNESGKVNKIE 239
                            I++  E           K+   G +                + 
Sbjct: 127 HFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT--------------VL 172

Query: 240 GTRGY------MAPE-FQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVF 282
                      + PE  +    +    D ++FG  + E+          L  +  L+F  
Sbjct: 173 PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY- 231

Query: 283 DEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPG 342
               D +                          +L      E+A  +      C+D +P 
Sbjct: 232 ---EDRH--------------------------QLPAPKAAELANLI----NNCMDYEPD 258

Query: 343 KRPDMRQVTGLVSKMYLESKN 363
            RP  R +   ++ ++     
Sbjct: 259 HRPSFRAIIRDLNSLFTPDLV 279

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 55.7 bits (135), Expect = 6e-09
 Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 65/244 (26%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTWLSRMQSSS--- 200
            +  + +LLG C   +   L+ + +    L D +R  + N     L  W    Q +    
Sbjct: 75  DNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV--QIAKGMN 131

Query: 201 ----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR-- 242
                           ++V          KI  FG A+L   +   E  K    EG +  
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQ----HVKITDFGLAKL---LGAEE--KEYHAEGGKVP 182

Query: 243 -GYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA 301
             +MA E     + T + DV+++GV V EL++           G   Y  +   +     
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT----------FGSKPYDGIPASE----- 227

Query: 302 VAGGVGGVRKWVDR--RLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
                  +   +++  RL       ++V   M     +C   D   RP  R++    SKM
Sbjct: 228 -------ISSILEKGERLPQPPICTIDVYMIM----RKCWMIDADSRPKFRELIIEFSKM 276

Query: 358 YLES 361
             + 
Sbjct: 277 ARDP 280

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 54.9 bits (133), Expect = 9e-09
 Identities = 48/249 (19%), Positives = 87/249 (34%), Gaps = 74/249 (29%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H +L++LLG C      Y++ E ++  NL D LR       + +              +
Sbjct: 67  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126

Query: 193 LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR--- 242
           L +         + + +V E +      K+  FG + L   ++G+         G +   
Sbjct: 127 LEKKNFIHRDLAARNCLVGENH----LVKVADFGLSRL---MTGDT---YTAHAGAKFPI 176

Query: 243 GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYRRV 292
            + APE  A    + K DV+AFGV++ E+          +   +V + +       YR  
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL----EKDYR-- 230

Query: 293 SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG 352
             +++                        P +V E M      C   +P  RP   ++  
Sbjct: 231 --MERPEGC--------------------PEKVYELM----RACWQWNPSDRPSFAEIHQ 264

Query: 353 LVSKMYLES 361
               M+ ES
Sbjct: 265 AFETMFQES 273

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 55.5 bits (134), Expect = 1e-08
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 43/183 (23%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL---- 174
           II +  +  S    +L E ++V+    H +++KL          YLV E   G  L    
Sbjct: 69  IIRKTSVSTS-SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127

Query: 175 -----------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSLC 212
                      A  ++        VLS  ++ +   +I+            S+E    + 
Sbjct: 128 IHRMKFNEVDAAVIIK-------QVLSG-VTYLHKHNIVHRDLKPENLLLESKEKDALI- 178

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
            KI  FG + +          K+ +  GT  Y+APE        +KCDV++ GV++  LL
Sbjct: 179 -KIVDFGLSAVF-----ENQKKMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILL 231

Query: 273 SGE 275
           +G 
Sbjct: 232 AGY 234

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 47/178 (26%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H  L++L     +    Y++ E++   +L D L+ P     T+               +
Sbjct: 66  QHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124

Query: 193 LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR--- 242
           +           +++I+VS+        KI  FG A L       E  +    EG +   
Sbjct: 125 IEERNYIHRDLRAANILVSDTL----SCKIADFGLARLI------EDNEYTAREGAKFPI 174

Query: 243 GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYR 290
            + APE    G  T K DV++FG+++ E+          ++  EV++ +      GYR
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----ERGYR 228

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 59/215 (27%)

Query: 119 IIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD 176
           I+ + K+R+    D+E+++  + ++ + HH ++ +L           LV E   G +L D
Sbjct: 58  IMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLD 117

Query: 177 ---------------------CLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKI 215
                                    P      +  +     +S   +  E+   ++  +I
Sbjct: 118 KLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177

Query: 216 ------CH----------------------------FGTAELCGEVSGNESGKVNKIEGT 241
                  H                            FG ++   +++  E   +    GT
Sbjct: 178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237

Query: 242 RGYMAPE--FQASGVVTQKCDVYAFGVVVLELLSG 274
             ++APE     +     KCD ++ GV++  LL G
Sbjct: 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 43/183 (23%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL---- 174
           +I +   +   D   +   + ++ +  H +++KL       +  Y+V E  +G  L    
Sbjct: 54  VINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112

Query: 175 -----------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSLC 212
                      A  ++        V S  ++ M   +I+            S+E    + 
Sbjct: 113 IKRKRFSEHDAARIIK-------QVFSG-ITYMHKHNIVHRDLKPENILLESKEKDCDI- 163

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
            KI  FG +         ++ K+    GT  Y+APE    G   +KCDV++ GV++  LL
Sbjct: 164 -KIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILL 216

Query: 273 SGE 275
           SG 
Sbjct: 217 SGT 219

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 50/192 (26%)

Query: 134 LRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTW 192
           L E   ++    H +++ LLG C+ S     +V  ++   +L + +RN    + TV    
Sbjct: 74  LTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKD-- 129

Query: 193 LSRM--QSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
           L     Q +                     ++ E+       K+  FG A    ++   E
Sbjct: 130 LIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLAR---DMYDKE 182

Query: 232 SGKVNKIEGTR---GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVL 278
              V+   G +    +MA E   +   T K DV++FGV++ EL++            ++ 
Sbjct: 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242

Query: 279 KFVFDEGIDGYR 290
            ++    + G R
Sbjct: 243 VYL----LQGRR 250

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 38/192 (19%), Positives = 73/192 (38%), Gaps = 50/192 (26%)

Query: 134 LRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTW 192
           L E   ++    H +++ LLG C+ S     +V  ++   +L + +RN    + TV    
Sbjct: 138 LTE-GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKD-- 193

Query: 193 LSRM--QSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
           L     Q +                     ++ E+       K+  FG A    ++   E
Sbjct: 194 LIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF----TVKVADFGLAR---DMYDKE 246

Query: 232 SGKVNKIEGTR---GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVL 278
              V+   G +    +MA E   +   T K DV++FGV++ EL++            ++ 
Sbjct: 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 306

Query: 279 KFVFDEGIDGYR 290
            ++    + G R
Sbjct: 307 VYL----LQGRR 314

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 47/178 (26%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H  L++L G C+      LV E +    L+D LR  R   F   +             +
Sbjct: 61  SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 119

Query: 193 LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR--- 242
           L           + + +V E        K+  FG              +     GT+   
Sbjct: 120 LEEACVIHRDLAARNCLVGENQ----VIKVSDFGMTRFV------LDDQYTSSTGTKFPV 169

Query: 243 GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
            + +PE  +    + K DV++FGV++ E+ S            EV++ +      G+R
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI----STGFR 223

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 43/177 (24%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR-NPRNPSFTVLSTW----------L 193
            H ++I+L G         ++ E++    L   LR      S   L             L
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163

Query: 194 SRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR---G 243
           + M        + +I+V+      L  K+  FG + +  +    +        G +    
Sbjct: 164 ANMNYVHRDLAARNILVNSN----LVCKVSDFGLSRVLED----DPEATYTTSGGKIPIR 215

Query: 244 YMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYR 290
           + APE  +    T   DV++FG+V+ E+          LS  EV+K +     DG+R
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI----NDGFR 268

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 35/177 (19%), Positives = 65/177 (36%), Gaps = 43/177 (24%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR-NPRNPSFTVLSTW----------L 193
            H ++I+L G    G    +V E++   +L   LR +    +   L             L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167

Query: 194 SRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR---G 243
           S +        + +++V          K+  FG + +  +    +        G +    
Sbjct: 168 SDLGYVHRDLAARNVLVDSNL----VCKVSDFGLSRVLED----DPDAAYTTTGGKIPIR 219

Query: 244 YMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
           + APE  A    +   DV++FGVV+ E+L+            +V+  V     +GYR
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV----EEGYR 272

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 59/245 (24%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTW----------LS 194
            +  +++++G C       LV E      L   L+  R+     +             L 
Sbjct: 76  DNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134

Query: 195 RMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR---GY 244
                     + ++++  ++     AKI  FG ++        +          +    +
Sbjct: 135 ESNFVHRDLAARNVLLVTQH----YAKISDFGLSKALRA----DENYYKAQTHGKWPVKW 186

Query: 245 MAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG 304
            APE       + K DV++FGV++ E  S           G   YR +   +        
Sbjct: 187 YAPECINYYKFSSKSDVWSFGVLMWEAFS----------YGQKPYRGMKGSE-------- 228

Query: 305 GVGGVRKWVDR--RLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE 360
               V   +++  R+      P E+ + M      C   D   RP    V   +   Y +
Sbjct: 229 ----VTAMLEKGERMGCPAGCPREMYDLM----NLCWTYDVENRPGFAAVELRLRNYYYD 280

Query: 361 SKNWA 365
             N  
Sbjct: 281 VVNEG 285

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 46/251 (18%), Positives = 80/251 (31%), Gaps = 75/251 (29%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H  L+K  G C      Y+V E++S   L + LR+                       +
Sbjct: 61  SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAF 119

Query: 193 LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR--- 242
           L   Q       + + +V  +     C K+  FG              +     GT+   
Sbjct: 120 LESHQFIHRDLAARNCLVDRDL----CVKVSDFGMTRYV------LDDQYVSSVGTKFPV 169

Query: 243 GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYRRV 292
            + APE       + K DV+AFG+++ E+           +  EV+  V      G+R  
Sbjct: 170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV----SQGHR-- 223

Query: 293 SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG 352
             + +   A                       + + M      C  E P KRP  +Q+  
Sbjct: 224 --LYRPHLA--------------------SDTIYQIM----YSCWHELPEKRPTFQQLLS 257

Query: 353 LVSKMYLESKN 363
            +  +  + K+
Sbjct: 258 SIEPLREKDKH 268

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 48/262 (18%), Positives = 87/262 (33%), Gaps = 60/262 (22%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCG--YLVYEHVSGANLADCLRNPRNPSFTVLST 191
            +E + ++   +H  +IK  G C         LV E+V   +L D L          L  
Sbjct: 81  KQE-IDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLL 138

Query: 192 WLSRMQSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNES 232
           +    Q                      +++  +       KI  FG A+   E  G+E 
Sbjct: 139 FAQ--QICEGMAYLHAQHYIHRDLAARNVLLDNDR----LVKIGDFGLAKAVPE--GHEY 190

Query: 233 GKVNKIEGTR---GYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDG 288
            +V   E       + APE           DV++FGV + ELL+  +             
Sbjct: 191 YRVR--EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI 248

Query: 289 ---YRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSYPVEVAEKMVLLGLQCVDEDP 341
                +++V+             + + ++R  RL   D  P EV   M      C + + 
Sbjct: 249 GIAQGQMTVLR------------LTELLERGERLPRPDKCPAEVYHLM----KNCWETEA 292

Query: 342 GKRPDMRQVTGLVSKMYLESKN 363
             RP    +  ++  ++ + + 
Sbjct: 293 SFRPTFENLIPILKTVHEKYQG 314

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 47/262 (17%), Positives = 79/262 (30%), Gaps = 58/262 (22%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCG--YLVYEHVSGANLADCLRNPRNPSFTVLST 191
            RE + ++   H   ++K  G           LV E++    L D L+  R         
Sbjct: 72  QRE-IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRL 129

Query: 192 WLSRMQSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNES 232
            L   Q                      I+V  E       KI  FG A+L       + 
Sbjct: 130 LLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA----HVKIADFGLAKLLPL----DK 181

Query: 233 GKVNKIEGTRG---YMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGY 289
                 E  +    + APE  +  + +++ DV++FGVV+ EL +                
Sbjct: 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT----------YCDKSC 231

Query: 290 RRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY--------PVEVAEKMVLLGLQCVDEDP 341
              +   +            R  +   L++          P EV E M      C    P
Sbjct: 232 SPSAEFLRMMGCERDVPALSR--LLELLEEGQRLPAPPACPAEVHELM----KLCWAPSP 285

Query: 342 GKRPDMRQVTGLVSKMYLESKN 363
             RP    +   +  ++  S+ 
Sbjct: 286 QDRPSFSALGPQLDMLWSGSRG 307

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 32/170 (18%)

Query: 130 DLEQLRER-LSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTV 188
            LE  R   L          ++ L GA   G    +  E + G +L   ++         
Sbjct: 92  RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR 151

Query: 189 LSTWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTAE-LCGEVSGN 230
              +L +                  ++ ++++S +  GS    +C FG A  L  +  G 
Sbjct: 152 ALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD--GSRA-ALCDFGHALCLQPDGLGK 208

Query: 231 ESGKVNKIEGTRGYMAPEFQASGVVTQ-----KCDVYAFGVVVLELLSGE 275
                + I GT  +MAPE     VV       K D+++   ++L +L+G 
Sbjct: 209 SLLTGDYIPGTETHMAPE-----VVMGKPCDAKVDIWSSCCMMLHMLNGC 253

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 53.7 bits (129), Expect = 6e-08
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 33/131 (25%)

Query: 162 GYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQS-----------------SSIIVS 204
           GY+V E+V G +L          +  +   +L  +                    +I+++
Sbjct: 159 GYIVMEYVGGQSLKRSKGQKLPVAEAI--AYLLEILPALSYLHSIGLVYNDLKPENIMLT 216

Query: 205 EENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAF 264
           EE       K+   G          +       + GT G+ APE       T   D+Y  
Sbjct: 217 EEQL-----KLIDLGAV--------SRINSFGYLYGTPGFQAPE-IVRTGPTVATDIYTV 262

Query: 265 GVVVLELLSGE 275
           G  +  L    
Sbjct: 263 GRTLAALTLDL 273

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 52.2 bits (126), Expect = 6e-08
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 47/178 (26%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H  L++L G C      +++ E+++   L + LR  R   F                 +
Sbjct: 77  SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 135

Query: 193 LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR--- 242
           L   Q       + + +V+++       K+  FG +            +     G++   
Sbjct: 136 LESKQFLHRDLAARNCLVNDQG----VVKVSDFGLSRYV------LDDEYTSSVGSKFPV 185

Query: 243 GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYR 290
            +  PE       + K D++AFGV++ E+           +  E  + +      G R
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI----AQGLR 239

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 52.3 bits (126), Expect = 7e-08
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 33/169 (19%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCG----YLVYEHVSGANLADCLRNPRNPS 185
           + ++ +E   ++    H ++++   +  S   G     LV E ++   L   L+  +   
Sbjct: 68  ERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMK 127

Query: 186 FTVLSTW----LSRMQ---------------SSSIIVSEENAGSLCAKICHFGTAELCGE 226
             VL +W    L  +Q                 +I ++    GS+  KI   G A L   
Sbjct: 128 IKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT-GSV--KIGDLGLATL--- 181

Query: 227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                +     + GT  +MAPE        +  DVYAFG+ +LE+ + E
Sbjct: 182 ---KRASFAKAVIGTPEFMAPEMYEEKY-DESVDVYAFGMCMLEMATSE 226

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 52.2 bits (126), Expect = 8e-08
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 26/135 (19%)

Query: 159 GNCGYLVYEHVSGANLADCLRN----PRNPSFTVLSTWLSRMQSS-------------SI 201
            +C YLV E++ G  L++ + +      + +    +  L  ++ +             +I
Sbjct: 83  DDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNI 142

Query: 202 IVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCD 260
           ++          KI  FG A+   E S  ++  V    GT  Y +PE QA G    +  D
Sbjct: 143 LIDSNKT----LKIFDFGIAKALSETSLTQTNHV---LGTVQYFSPE-QAKGEATDECTD 194

Query: 261 VYAFGVVVLELLSGE 275
           +Y+ G+V+ E+L GE
Sbjct: 195 IYSIGIVLYEMLVGE 209

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 52.3 bits (126), Expect = 8e-08
 Identities = 52/268 (19%), Positives = 85/268 (31%), Gaps = 90/268 (33%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS---- 200
           +H +++ LLGAC  G    ++ E+    +L + LR  R+      ++             
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 201 -------------------------------IIVSEENAGSLCAKICHFGTAELCGEVSG 229
                                          I+++         KIC FG A        
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGR----ITKICDFGLARDI----- 195

Query: 230 NESGKVNKIEGTR---GYMAPEFQASGVVTQKCDVYAFGVVVLELLS-----------GE 275
                       R    +MAPE   + V T + DV+++G+ + EL S             
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255

Query: 276 EVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQ 335
           +  K +     +G+R    +     A                    P E+ + M      
Sbjct: 256 KFYKMI----KEGFR----MLSPEHA--------------------PAEMYDIM----KT 283

Query: 336 CVDEDPGKRPDMRQVTGLVSKMYLESKN 363
           C D DP KRP  +Q+  L+ K   ES N
Sbjct: 284 CWDADPLKRPTFKQIVQLIEKQISESTN 311

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 47/262 (17%), Positives = 86/262 (32%), Gaps = 67/262 (25%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCG--YLVYEHVSGANLADCLRNPRNPSFTVLST 191
            RE + ++    H +++K  G C S       L+ E++   +L D L+  +      +  
Sbjct: 90  ERE-IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKL 147

Query: 192 WLSRMQSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNES 232
                Q                      I+V  EN      KI  FG  ++  +    + 
Sbjct: 148 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENEN----RVKIGDFGLTKVLPQ----DK 199

Query: 233 GKVNKIEGTRG---YMAPEFQASGVVTQKCDVYAFGVVVLELLS-----GEEVLKFVFDE 284
                 E       + APE       +   DV++FGVV+ EL +          +F+   
Sbjct: 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259

Query: 285 GIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY--------PVEVAEKMVLLGLQC 336
           G D   ++ V                  +   LK++         P E+   M     +C
Sbjct: 260 GNDKQGQMIVFH----------------LIELLKNNGRLPRPDGCPDEIYMIM----TEC 299

Query: 337 VDEDPGKRPDMRQVTGLVSKMY 358
            + +  +RP  R +   V ++ 
Sbjct: 300 WNNNVNQRPSFRDLALRVDQIR 321

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 35/197 (17%), Positives = 65/197 (32%), Gaps = 70/197 (35%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS---- 200
            H +++ LLGAC  G    ++ E+    +L + LR       T  +  ++   +S+    
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167

Query: 201 ---------------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESG 233
                                      ++++  +     AKI  FG A            
Sbjct: 168 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH----VAKIGDFGLAR----------- 212

Query: 234 KVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL-----------LS 273
            +                 +MAPE     V T + DV+++G+++ E+           L 
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272

Query: 274 GEEVLKFVFDEGIDGYR 290
             +  K V     DGY+
Sbjct: 273 NSKFYKLV----KDGYQ 285

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 42/172 (24%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL--------------- 174
             E++   +S++    H ++IKL          YLV E   G  L               
Sbjct: 89  FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA 148

Query: 175 ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSLCAKICHFGTAEL 223
           A+ ++        +LS  +  +   +I+            ++ +  ++  KI  FG +  
Sbjct: 149 ANIMK-------QILSG-ICYLHKHNIVHRDIKPENILLENKNSLLNI--KIVDFGLSSF 198

Query: 224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                 ++  K+    GT  Y+APE        +KCDV++ GV++  LL G 
Sbjct: 199 F-----SKDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGY 244

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 37/179 (20%), Positives = 62/179 (34%), Gaps = 49/179 (27%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTWLSRMQSSS--- 200
            +  + +LLG C   +   L+ + +    L D +R  + N     L  W    Q +    
Sbjct: 75  DNPHVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV--QIAKGMN 131

Query: 201 ----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR-- 242
                           ++V          KI  FG A+L   +   E  K    EG +  
Sbjct: 132 YLEDRRLVHRDLAARNVLVKTPQ----HVKITDFGLAKL---LGAEE--KEYHAEGGKVP 182

Query: 243 -GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
             +MA E     + T + DV+++GV V EL++            E+   +      G R
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL----EKGER 237

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 38/257 (14%), Positives = 79/257 (30%), Gaps = 60/257 (23%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCG--YLVYEHVSGANLADCLRNPRNP-SFTVLS 190
            +E + ++   +H +++K  G C         L+ E +   +L + L   +N  +     
Sbjct: 71  KKE-IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 129

Query: 191 TWLSRMQSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
            +    Q                      ++V  E+      KI  FG  +        +
Sbjct: 130 KYAV--QICKGMDYLGSRQYVHRDLAARNVLVESEH----QVKIGDFGLTKAIET----D 179

Query: 232 SGKVNKIEGTR---GYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGID 287
                  +       + APE           DV++FGV + ELL+  +     +      
Sbjct: 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 239

Query: 288 G---YRRVSVVDKASEAVAGGVGGVRKWVDR--RLK--DSYPVEVAEKMVLLGLQCVDED 340
               + +++V              +   +    RL    + P EV + M     +C +  
Sbjct: 240 IGPTHGQMTVTR------------LVNTLKEGKRLPCPPNCPDEVYQLM----RKCWEFQ 283

Query: 341 PGKRPDMRQVTGLVSKM 357
           P  R   + +      +
Sbjct: 284 PSNRTSFQNLIEGFEAL 300

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 52/180 (28%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-- 200
            H  ++KL+G   + N  +++ E  +   L   L+  +  S  + S  L     Q S+  
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-FSLDLAS--LILYAYQLSTAL 504

Query: 201 -----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR- 242
                            ++VS  +    C K+  FG +         E     K    + 
Sbjct: 505 AYLESKRFVHRDIAARNVLVSSND----CVKLGDFGLSRYM------EDSTYYKASKGKL 554

Query: 243 --GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYR 290
              +MAPE       T   DV+ FGV + E+          +   +V+  +     +G R
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI----ENGER 610

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 47/252 (18%), Positives = 83/252 (32%), Gaps = 68/252 (26%)

Query: 145 HHSSLIKLLGACVSGNCG--YLVYEHVSGANLADCLRNPRNP-SFTVLSTWLSRMQSSS- 200
            H +++K  G C S       L+ E++   +L D L+  +       L  + S  Q    
Sbjct: 69  QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS--QICKG 126

Query: 201 ------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR 242
                             I+V  EN      KI  FG  ++  +    +       E   
Sbjct: 127 MEYLGTKRYIHRDLATRNILVENEN----RVKIGDFGLTKVLPQ----DKEFFKVKEPGE 178

Query: 243 G---YMAPEFQASGVVTQKCDVYAFGVVVLELLS-----GEEVLKFVFDEGIDGYRRVSV 294
               + APE       +   DV++FGVV+ EL +          +F+   G D   ++ V
Sbjct: 179 SPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238

Query: 295 VDKASEAVAGGVGGVRKWVDRRLKDSY--------PVEVAEKMVLLGLQCVDEDPGKRPD 346
                             +   LK++         P E+   M     +C + +  +RP 
Sbjct: 239 FH----------------LIELLKNNGRLPRPDGCPDEIYMIM----TECWNNNVNQRPS 278

Query: 347 MRQVTGLVSKMY 358
            R +   V ++ 
Sbjct: 279 FRDLALRVDQIR 290

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 28/155 (18%)

Query: 144 SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSI-- 201
             H ++I+           Y+  E    A L + +         +    L +  +S +  
Sbjct: 75  DEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH 133

Query: 202 -----IV------------SEENAGSLCAKICHFGTAELCGEVSGNES--GKVNKIEGTR 242
                IV                 G + A I  FG   LC +++       + + + GT 
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFG---LCKKLAVGRHSFSRRSGVPGTE 190

Query: 243 GYMAPE---FQASGVVTQKCDVYAFGVVVLELLSG 274
           G++APE          T   D+++ G V   ++S 
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 44/181 (24%), Positives = 68/181 (37%), Gaps = 32/181 (17%)

Query: 119 IIFQRKL--RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD 176
           I+   K      L  E L+   S+     H  +++LL    S    Y+V+E + GA+L  
Sbjct: 56  IVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCF 115

Query: 177 --CLRNPRNPSFT----------VLSTWLSRMQSSSII-----------VSEENAGSLCA 213
               R      ++          +L   L     ++II            S+EN+  +  
Sbjct: 116 EIVKRADAGFVYSEAVASHYMRQILEA-LRYCHDNNIIHRDVKPHCVLLASKENSAPV-- 172

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           K+  FG A   GE             GT  +MAPE        +  DV+  GV++  LLS
Sbjct: 173 KLGGFGVAIQLGE----SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228

Query: 274 G 274
           G
Sbjct: 229 G 229

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 31/179 (17%), Positives = 57/179 (31%), Gaps = 47/179 (26%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTWLSRMQSSS--- 200
            H +LI+L G         +V E     +L D LR  + +     LS +    Q +    
Sbjct: 79  DHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMG 135

Query: 201 ----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR-- 242
                           ++++  +      KI  FG      +            E  +  
Sbjct: 136 YLESKRFIHRDLAARNLLLATRD----LVKIGDFGLMRALPQ----NDDHYVMQEHRKVP 187

Query: 243 -GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
             + APE   +   +   D + FGV + E+ +          G ++L  +     +G R
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI---DKEGER 243

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 26/131 (19%)

Query: 163 YLVYEHVSGANLADCLRN--PRNPSFTV--LSTWLSRMQSS-------------SIIVSE 205
           Y+    ++G +LA  LR   P  P   V  +    S + ++             +I+VS 
Sbjct: 110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSA 169

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAF 264
           ++     A +  FG A    +    + G      GT  YMAPE + S    T + D+YA 
Sbjct: 170 DDF----AYLVDFGIASATTDEKLTQLGNT---VGTLYYMAPE-RFSESHATYRADIYAL 221

Query: 265 GVVVLELLSGE 275
             V+ E L+G 
Sbjct: 222 TCVLYECLTGS 232

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 46/177 (25%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLR-NPRNPSFTVLSTW----------L 193
            H  ++KL+G   + N  +++ E  +   L   L+    +     L  +          L
Sbjct: 74  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132

Query: 194 SRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR---G 243
              +       + +++VS  +    C K+  FG +         E     K    +    
Sbjct: 133 ESKRFVHRDIAARNVLVSSND----CVKLGDFGLSRYM------EDSTYYKASKGKLPIK 182

Query: 244 YMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
           +MAPE       T   DV+ FGV + E+L             +V+  +     +G R
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI----ENGER 235

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 49.9 bits (120), Expect = 5e-07
 Identities = 42/213 (19%), Positives = 68/213 (31%), Gaps = 72/213 (33%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL 193
           L E  +V+ + +H  +IKL GAC       L+ E+    +L   LR  R      L +  
Sbjct: 74  LSE-FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132

Query: 194 SRMQSSSIIVSEEN-------------------------------------AGSLCAKIC 216
           SR  SS     E                                       A     KI 
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS 192

Query: 217 HFGTAELCGEVSGNESGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVV 267
            FG +             V + +     ++G     +MA E     + T + DV++FGV+
Sbjct: 193 DFGLSR-----------DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVL 241

Query: 268 VLEL----------LSGEEVLKFVFDEGIDGYR 290
           + E+          +  E +   +      G+R
Sbjct: 242 LWEIVTLGGNPYPGIPPERLFNLL----KTGHR 270

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 45/178 (25%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLS------------TW 192
            H ++I+L G         +V E++   +L   LR      FTV+              +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKY 162

Query: 193 LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR--- 242
           LS M        + +I+++      L  K+  FG   +  +    +        G +   
Sbjct: 163 LSDMGYVHRDLAARNILINSN----LVCKVSDFGLGRVLED----DPEAAYTTRGGKIPI 214

Query: 243 GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYR 290
            + +PE  A    T   DV+++G+V+ E+          +S ++V+K V     +GYR
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV----DEGYR 268

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 43/203 (21%), Positives = 75/203 (36%), Gaps = 66/203 (32%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFT-VLSTW 192
           L E  SV+   +   +++LLG    G    ++ E ++  +L   LR+ R       +   
Sbjct: 76  LNE-ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134

Query: 193 LSRMQ---------------SSS-----------IIVSEENAGSLCAKICHFGTAELCGE 226
            S  +               +++            +V+E+       KI  FG       
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF----TVKIGDFGMTR---- 186

Query: 227 VSGNESGKVNKIE----GTRGY-----MAPEFQASGVVTQKCDVYAFGVVVLEL------ 271
                   + + +    G +G      M+PE    GV T   DV++FGVV+ E+      
Sbjct: 187 -------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239

Query: 272 ----LSGEEVLKFVFDEGIDGYR 290
               LS E+VL+FV    ++G  
Sbjct: 240 PYQGLSNEQVLRFV----MEGGL 258

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 49.1 bits (118), Expect = 7e-07
 Identities = 35/180 (19%), Positives = 56/180 (31%), Gaps = 52/180 (28%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-- 200
            H  ++KL+G        +++ E      L   L   +  S  VL+  L     Q     
Sbjct: 71  DHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNK-NSLKVLT--LVLYSLQICKAM 126

Query: 201 -----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR- 242
                            I+V+       C K+  FG +         E     K   TR 
Sbjct: 127 AYLESINCVHRDIAVRNILVASPE----CVKLGDFGLSRYI------EDEDYYKASVTRL 176

Query: 243 --GYMAPEFQASGVVTQKCDVYAFGVVVLEL----------LSGEEVLKFVFDEGIDGYR 290
              +M+PE       T   DV+ F V + E+          L  ++V+  +      G R
Sbjct: 177 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----EKGDR 232

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 42/198 (21%), Positives = 70/198 (35%), Gaps = 71/198 (35%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS---- 200
            H ++I LLGAC      Y++ E+ S  NL + L+  R P            +       
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 201 -----------------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
                                        ++V+E+N      KI  FG A          
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLAR--------- 239

Query: 232 SGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL----------L 272
              ++ I+     T G     +MAPE     + T + DV++FGV++ E+          +
Sbjct: 240 --DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297

Query: 273 SGEEVLKFVFDEGIDGYR 290
             EE+ K +     +G+R
Sbjct: 298 PVEELFKLL----KEGHR 311

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 35/204 (17%), Positives = 63/204 (30%), Gaps = 63/204 (30%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL 193
            RE   ++    H  +++  G C  G    +V+E++   +L   LR+    +  +     
Sbjct: 91  QRE-AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149

Query: 194 SRMQSSS--------------------------------IIVSEENAGSLCAKICHFGTA 221
                                                   +V +     L  KI  FG +
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGDFGMS 205

Query: 222 ELCGEVSGNESGKVNKIEGTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL----- 271
               ++   +  +V    G R      +M PE       T + DV++FGVV+ E+     
Sbjct: 206 R---DIYSTDYYRV----GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258

Query: 272 -----LSGEEVLKFVFDEGIDGYR 290
                LS  E +  +      G  
Sbjct: 259 QPWYQLSNTEAIDCI----TQGRE 278

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 49.6 bits (119), Expect = 7e-07
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 41/184 (22%)

Query: 119 IIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL- 174
            I +R+    RR +  E++   +S++ +  H ++I L     +     L+ E VSG  L 
Sbjct: 44  FIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELF 103

Query: 175 --------------ADCLRNPRNPSFTVLSTWLSRMQSSSII----------VSEENAGS 210
                            ++        +L   ++ + +  I           + ++N   
Sbjct: 104 DFLAQKESLSEEEATSFIK-------QILDG-VNYLHTKKIAHFDLKPENIMLLDKNIPI 155

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
              K+  FG A         +  +   I GT  ++APE      +  + D+++ GV+   
Sbjct: 156 PHIKLIDFGLAHEI-----EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210

Query: 271 LLSG 274
           LLSG
Sbjct: 211 LLSG 214

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 49.2 bits (118), Expect = 8e-07
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 24/136 (17%)

Query: 158 SGNCGYLVYEHVSGANLADCLRN----PRNPSFTVLSTWLSRMQSS-------------S 200
           +G   Y+V E+V G  L D +          +  V++     +  S             +
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN 146

Query: 201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKC 259
           I++S  NA     K+  FG A    + SGN   +   + GT  Y++PE QA G  V  + 
Sbjct: 147 IMISATNA----VKVMDFGIARAIAD-SGNSVTQTAAVIGTAQYLSPE-QARGDSVDARS 200

Query: 260 DVYAFGVVVLELLSGE 275
           DVY+ G V+ E+L+GE
Sbjct: 201 DVYSLGCVLYEVLTGE 216

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 46/202 (22%), Positives = 69/202 (34%), Gaps = 60/202 (29%)

Query: 134 LRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTW 192
             E L V+C+  HH ++I LLGAC      YL  E+    NL D LR  R          
Sbjct: 73  AGE-LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAI 131

Query: 193 LSRMQS---------------------SS------------IIVSEENAGSLCAKICHFG 219
            +   S                     S             I+V E       AKI  FG
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY----VAKIADFG 187

Query: 220 TAELCGEVSGNESGKV-NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL------- 271
            +           G++  +      +MA E     V T   DV+++GV++ E+       
Sbjct: 188 LSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241

Query: 272 ---LSGEEVLKFVFDEGIDGYR 290
              ++  E+ + +      GYR
Sbjct: 242 YCGMTCAELYEKL----PQGYR 259

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 49.3 bits (118), Expect = 1e-06
 Identities = 40/198 (20%), Positives = 73/198 (36%), Gaps = 56/198 (28%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-----NPSFTV 188
           L E   +I + +H ++++ +G  +     +++ E ++G +L   LR  R       S  +
Sbjct: 122 LME-ALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180

Query: 189 LSTWLSRM--QSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEV 227
           L   L  +    +                     +++    G +  KI  FG A    ++
Sbjct: 181 LD--LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR---DI 234

Query: 228 SGNESGKVNKIEGTRGY-----MAPEFQASGVVTQKCDVYAFGVVVLEL----------L 272
                 +     G         M PE    G+ T K D ++FGV++ E+           
Sbjct: 235 YRAGYYRK----GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 290

Query: 273 SGEEVLKFVFDEGIDGYR 290
           S +EVL+FV      G R
Sbjct: 291 SNQEVLEFV----TSGGR 304

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 64/202 (31%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-----NPSFTV 188
           L E   +I + +H ++++ +G  +     +++ E ++G +L   LR  R       S  +
Sbjct: 81  LME-ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139

Query: 189 LSTWLSRM--QSSS-------------------IIVSEENAGSLCAKICHFGTAELCGEV 227
           L   L  +    +                     +++    G +  KI  FG A      
Sbjct: 140 LD--LLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA-KIGDFGMAR----- 191

Query: 228 SGNESGKVNKIE----GTRGY-----MAPEFQASGVVTQKCDVYAFGVVVLEL------- 271
                  + +      G         M PE    G+ T K D ++FGV++ E+       
Sbjct: 192 ------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245

Query: 272 ---LSGEEVLKFVFDEGIDGYR 290
               S +EVL+FV      G R
Sbjct: 246 YPSKSNQEVLEFV----TSGGR 263

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 45/198 (22%), Positives = 69/198 (34%), Gaps = 71/198 (35%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS---- 200
            H ++I LLGAC      Y++ E+ S  NL + LR  R P            +       
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 201 -----------------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
                                        ++V+E N      KI  FG A          
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNV----MKIADFGLAR--------- 205

Query: 232 SGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL----------L 272
              +N I+     T G     +MAPE     V T + DV++FGV++ E+          +
Sbjct: 206 --DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263

Query: 273 SGEEVLKFVFDEGIDGYR 290
             EE+ K +     +G+R
Sbjct: 264 PVEELFKLL----KEGHR 277

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 36/177 (20%), Positives = 68/177 (38%), Gaps = 45/177 (25%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTW----------L 193
            H+ +++LLG C  G+   LV +++   +L D +R  R      +L  W          L
Sbjct: 73  DHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYL 131

Query: 194 SRMQ-------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR---G 243
                      + ++++   +      ++  FG A+L   +  ++  K       +    
Sbjct: 132 EEHGMVHRNLAARNVLLKSPS----QVQVADFGVADL---LPPDD--KQLLYSEAKTPIK 182

Query: 244 YMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
           +MA E    G  T + DV+++GV V EL++            EV   +      G R
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL----EKGER 235

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 34/206 (16%), Positives = 64/206 (31%), Gaps = 79/206 (38%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS---- 200
            H +++ LLGAC      YL++E+    +L + LR+ R         + ++ +       
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 201 ------------------------------------IIVSEENAGSLCAKICHFGTAELC 224
                                               ++V+         KIC FG A   
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK----VVKICDFGLAR-- 220

Query: 225 GEVSGNESGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLELLS-- 273
                     +                 +MAPE    G+ T K DV+++G+++ E+ S  
Sbjct: 221 ---------DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271

Query: 274 ---------GEEVLKFVFDEGIDGYR 290
                         K +     +G++
Sbjct: 272 VNPYPGIPVDANFYKLI----QNGFK 293

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 41/184 (22%)

Query: 119 IIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL- 174
            I +R+    RR +  E +   +S++    H ++I L     +     L+ E V+G  L 
Sbjct: 43  FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102

Query: 175 --------------ADCLRNPRNPSFTVLSTWLSRMQSSSII----------VSEENAGS 210
                          + L+        +L+  +  + S  I           + + N   
Sbjct: 103 DFLAEKESLTEEEATEFLK-------QILNG-VYYLHSLQIAHFDLKPENIMLLDRNVPK 154

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
              KI  FG A        +   +   I GT  ++APE      +  + D+++ GV+   
Sbjct: 155 PRIKIIDFGLAHKI-----DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 209

Query: 271 LLSG 274
           LLSG
Sbjct: 210 LLSG 213

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 33/170 (19%)

Query: 127 RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD-CLRNPRNPS 185
           +  D   +++ +S++  + H +++ L  +  S     +++E +SG ++ +          
Sbjct: 41  KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT--SAFE 98

Query: 186 FT----------VLSTWLSRMQSSSII-----------VSEENAGSLCAKICHFGTAELC 224
                       V    L  + S +I             +  ++ ++  KI  FG A   
Sbjct: 99  LNEREIVSYVHQVCEA-LQFLHSHNIGHFDIRPENIIYQTRRSS-TI--KIIEFGQARQL 154

Query: 225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
                        +     Y APE     VV+   D+++ G +V  LLSG
Sbjct: 155 -----KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 41/184 (22%)

Query: 119 IIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL- 174
            I +R+    RR +  E++   +S++ +  H ++I L     +     L+ E VSG  L 
Sbjct: 44  FIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELF 103

Query: 175 --------------ADCLRNPRNPSFTVLSTWLSRMQSSSII----------VSEENAGS 210
                            ++        +L   ++ + +  I           + ++N   
Sbjct: 104 DFLAQKESLSEEEATSFIK-------QILDG-VNYLHTKKIAHFDLKPENIMLLDKNIPI 155

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
              K+  FG A         +  +   I GT  ++APE      +  + D+++ GV+   
Sbjct: 156 PHIKLIDFGLA-----HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210

Query: 271 LLSG 274
           LLSG
Sbjct: 211 LLSG 214

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 41/184 (22%)

Query: 119 IIFQRKL---RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL- 174
            I +R+L   RR +  E++   ++++    H ++I L     +     L+ E VSG  L 
Sbjct: 37  FIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 96

Query: 175 --------------ADCLRNPRNPSFTVLSTWLSRMQSSSII----------VSEENAGS 210
                            L+        +L   +  + S  I           + ++N  +
Sbjct: 97  DFLAEKESLTEDEATQFLK-------QILDG-VHYLHSKRIAHFDLKPENIMLLDKNVPN 148

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
              K+  FG A            +   I GT  ++APE      +  + D+++ GV+   
Sbjct: 149 PRIKLIDFGIAHKI-----EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI 203

Query: 271 LLSG 274
           LLSG
Sbjct: 204 LLSG 207

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 50/180 (27%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-- 200
            +  +++L+G C       LV E   G  L   L   R     V +  ++ +  Q S   
Sbjct: 394 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSN--VAELLHQVSMGM 449

Query: 201 -----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR- 242
                            +++   +     AKI  FG ++  G     +          + 
Sbjct: 450 KYLEEKNFVHRNLAARNVLLVNRH----YAKISDFGLSKALGA----DDSYYTARSAGKW 501

Query: 243 --GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
              + APE       + + DV+++GV + E LS          G EV+ F+      G R
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI----EQGKR 557

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 45/198 (22%), Positives = 69/198 (34%), Gaps = 71/198 (35%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS---- 200
            H ++I LLGAC      Y++ E+ S  NL + LR  R P            +       
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 201 -----------------------------IIVSEENAGSLCAKICHFGTAELCGEVSGNE 231
                                        ++V+E N      KI  FG A          
Sbjct: 205 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLAR--------- 251

Query: 232 SGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL----------L 272
              +N I+     T G     +MAPE     V T + DV++FGV++ E+          +
Sbjct: 252 --DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309

Query: 273 SGEEVLKFVFDEGIDGYR 290
             EE+ K +     +G+R
Sbjct: 310 PVEELFKLL----KEGHR 323

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 50/180 (27%)

Query: 145 HHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM--QSSS-- 200
            +  +++L+G C       LV E   G  L   L   R     V +  ++ +  Q S   
Sbjct: 68  DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSN--VAELLHQVSMGM 123

Query: 201 -----------------IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTR- 242
                            +++   +     AKI  FG ++  G     +          + 
Sbjct: 124 KYLEEKNFVHRDLAARNVLLVNRH----YAKISDFGLSKALGA----DDSYYTARSAGKW 175

Query: 243 --GYMAPEFQASGVVTQKCDVYAFGVVVLELLS----------GEEVLKFVFDEGIDGYR 290
              + APE       + + DV+++GV + E LS          G EV+ F+      G R
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI----EQGKR 231

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 47.2 bits (113), Expect = 4e-06
 Identities = 39/202 (19%), Positives = 67/202 (33%), Gaps = 58/202 (28%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL 193
            RE   ++    H  ++K  G C  G+   +V+E++   +L   LR    P   +L    
Sbjct: 65  QRE-AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHG-PDAMILVDGQ 122

Query: 194 SRMQSSSIIVS----------------EEN--------------AGSLCAKICHFGTAEL 223
            R     + +S                                   +L  KI  FG +  
Sbjct: 123 PRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR- 181

Query: 224 CGEVSGNESGKVNKIEGTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLEL------- 271
             +V   +  +V    G        +M PE       T + DV++FGV++ E+       
Sbjct: 182 --DVYSTDYYRV----GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235

Query: 272 ---LSGEEVLKFVFDEGIDGYR 290
              LS  EV++ +      G  
Sbjct: 236 WFQLSNTEVIECI----TQGRV 253

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 43/201 (21%), Positives = 65/201 (32%), Gaps = 75/201 (37%)

Query: 145 HHSSLIKLLGAC-VSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSS--- 200
           HH +++ LLGAC   G    ++ E     NL+  LR+ R   F         +       
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR-NEFVPYKVAPEDLYKDFLTL 147

Query: 201 -------------------------------IIVSEENAGSLCAKICHFGTAELCGEVSG 229
                                          I++SE+N      KIC FG A        
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN----VVKICDFGLAR------- 196

Query: 230 NESGKVNKIE----GTRG-----YMAPEFQASGVVTQKCDVYAFGVVVLELLS------- 273
                + K               +MAPE     V T + DV++FGV++ E+ S       
Sbjct: 197 ----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252

Query: 274 ----GEEVLKFVFDEGIDGYR 290
                EE  + +     +G R
Sbjct: 253 GVKIDEEFCRRL----KEGTR 269

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 29/171 (16%)

Query: 124 KLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRN 183
                 D E +R+ +  +    H +L+ L  A    N   ++YE +SG  L + + +  N
Sbjct: 191 MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN 250

Query: 184 PSFT----------VLSTWLSRMQSSSII----------VSEENAGSLCAKICHFGTAEL 223
              +          V    L  M  ++ +           + + +  L  K+  FG    
Sbjct: 251 -KMSEDEAVEYMRQVCKG-LCHMHENNYVHLDLKPENIMFTTKRSNEL--KLIDFGLTAH 306

Query: 224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
                 +    V    GT  + APE      V    D+++ GV+   LLSG
Sbjct: 307 L-----DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 46.9 bits (112), Expect = 5e-06
 Identities = 33/176 (18%), Positives = 69/176 (39%), Gaps = 29/176 (16%)

Query: 122 QRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNP 181
           +   R S   + L E +++     H ++++ LG+        +  E V G +L+  LR+ 
Sbjct: 54  EIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK 113

Query: 182 RNP---SFTVLSTW-------LSRMQSSSII----------VSEENAGSLCAKICHFGTA 221
             P   +   +  +       L  +  + I+          ++  +      KI  FGT+
Sbjct: 114 WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSG---VLKISDFGTS 170

Query: 222 ELCGEVSGNESGKVNKIEGTRGYMAPE--FQASGVVTQKCDVYAFGVVVLELLSGE 275
                ++G          GT  YMAPE   +      +  D+++ G  ++E+ +G+
Sbjct: 171 ---KRLAGINP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 46.8 bits (111), Expect = 7e-06
 Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 30/165 (18%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVL 189
              Q+   L V+   +   ++   GA  S     +  EH+ G +L   L+        +L
Sbjct: 74  IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQIL 133

Query: 190 STWLSRM------------------QSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN- 230
                 +                  + S+I+V+         K+C FG       VSG  
Sbjct: 134 GKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE----IKLCDFG-------VSGQL 182

Query: 231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                N   GTR YM+PE       + + D+++ G+ ++E+  G 
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 33/213 (15%), Positives = 63/213 (29%), Gaps = 80/213 (37%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL 193
             E   +  R  H +++ LLG         +++ + S  +L + L     P   V ST  
Sbjct: 60  RHE-AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS-PHSDVGSTDD 117

Query: 194 SRMQSSS----------------------------------IIVSEENAGSLCAKICHFG 219
            R   S+                                  ++V ++    L  KI   G
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK----LNVKISDLG 173

Query: 220 TAELCGEVSGNESGKVNKIEGTRGY------------MAPEFQASGVVTQKCDVYAFGVV 267
                            ++     Y            MAPE    G  +   D++++GVV
Sbjct: 174 LFR--------------EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 219

Query: 268 VLEL----------LSGEEVLKFVFDEGIDGYR 290
           + E+           S ++V++ +     +   
Sbjct: 220 LWEVFSYGLQPYCGYSNQDVVEMI----RNRQV 248

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 46.6 bits (111), Expect = 7e-06
 Identities = 40/172 (23%), Positives = 61/172 (35%), Gaps = 31/172 (18%)

Query: 124 KLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRN 183
                LD   ++  +S++ + HH  LI L  A        L+ E +SG  L D +    +
Sbjct: 85  NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAED 143

Query: 184 PSFT----------VLSTWLSRMQSSSII-----------VSEENAGSLCAKICHFGTAE 222
              +               L  M   SI+            +++ + S+  KI  FG A 
Sbjct: 144 YKMSEAEVINYMRQACEG-LKHMHEHSIVHLDIKPENIMCETKKAS-SV--KIIDFGLAT 199

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
                  N    V     T  + APE      V    D++A GV+   LLSG
Sbjct: 200 KL-----NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 14/67 (20%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV----TQKCDVYAFGVVVL 269
           K+  FG   L  E+    +G     EG   YMAPE     ++        DV++ G+ +L
Sbjct: 197 KLGDFG---LLVELG--TAGAGEVQEGDPRYMAPE-----LLQGSYGTAADVFSLGLTIL 246

Query: 270 ELLSGEE 276
           E+    E
Sbjct: 247 EVACNME 253

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 72/213 (33%)

Query: 134 LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL 193
            RE  +++    + +++KLLG C  G    L++E+++  +L + LR+    +   LS   
Sbjct: 98  QRE-AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSD 156

Query: 194 SRMQSSSIIVSEEN-------------------------------------AGSLCAKIC 216
              ++                                                ++  KI 
Sbjct: 157 LSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA 216

Query: 217 HFGTAELCGEVSGNESGKVNKIE----GTRGYM-----APEFQASGVVTQKCDVYAFGVV 267
            FG +             +   +         +      PE       T + DV+A+GVV
Sbjct: 217 DFGLSR-----------NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV 265

Query: 268 VLEL----------LSGEEVLKFVFDEGIDGYR 290
           + E+          ++ EEV+ +V     DG  
Sbjct: 266 LWEIFSYGLQPYYGMAHEEVIYYV----RDGNI 294

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 32/207 (15%), Positives = 61/207 (29%), Gaps = 73/207 (35%)

Query: 134 LRERLSVICRSHHSSLIKLLGAC-----VSGNCGYLVYEHVSGANLADCLRN--PRNPSF 186
           L E  + +    H ++I+LLG C            ++   +   +L   L          
Sbjct: 84  LSE-AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK 142

Query: 187 TVLSTWLSRM--QSSS-------------------IIVSEENAGSLCAKICHFGTAELCG 225
            +    L +     +                     ++ ++        +  FG ++   
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDM----TVCVADFGLSK--- 195

Query: 226 EVSGNESGKVNKIEGTRGY------------MAPEFQASGVVTQKCDVYAFGVVVLEL-- 271
                      KI     Y            +A E  A  V T K DV+AFGV + E+  
Sbjct: 196 -----------KIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

Query: 272 --------LSGEEVLKFVFDEGIDGYR 290
                   +   E+  ++    + G+R
Sbjct: 245 RGMTPYPGVQNHEMYDYL----LHGHR 267

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 36/208 (17%), Positives = 62/208 (29%), Gaps = 74/208 (35%)

Query: 134 LRERLSVICRSHHSSLIKLLGAC------VSGNCGYLVYEHVSGANLADCLR------NP 181
           LRE  + +    H  + KL+G               ++   +   +L   L       NP
Sbjct: 73  LRE-AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131

Query: 182 RNPSFTVLSTW----------LSRMQ-------SSSIIVSEENAGSLCAKICHFGTAELC 224
            N     L  +          LS          + + +++E+        +  FG +   
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDM----TVCVADFGLSR-- 185

Query: 225 GEVSGNESGKVNKIEGTRGY------------MAPEFQASGVVTQKCDVYAFGVVVLEL- 271
                       KI     Y            +A E  A  + T   DV+AFGV + E+ 
Sbjct: 186 ------------KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

Query: 272 ---------LSGEEVLKFVFDEGIDGYR 290
                    +   E+  ++    I G R
Sbjct: 234 TRGQTPYAGIENAEIYNYL----IGGNR 257

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 13/60 (21%), Positives = 22/60 (36%)

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
                    E                 GT+ YM+PE       + K D+++ G+++ ELL
Sbjct: 211 VTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 13/139 (9%), Positives = 27/139 (19%), Gaps = 24/139 (17%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEF--QASGVVTQKCDVYAFGVVVLEL 271
            +         G                  Y   EF   ++   T   + +  G+ +  +
Sbjct: 234 MLGDVSALWKVGTRG-------PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286

Query: 272 LSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVL 331
                     F     G +                      +        P  V  K ++
Sbjct: 287 WCL----FLPFGLVTPGIKGSWKRPSLRVP-------GTDSLAFGSCTPLPDFV--KTLI 333

Query: 332 LGLQCVDEDPGKRPDMRQV 350
                   D  +R    + 
Sbjct: 334 GRFLNF--DRRRRLLPLEA 350

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 34/177 (19%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD-C 177
           II  R ++   D E+++  +SV+ +  H++LI+L  A  S N   LV E+V G  L D  
Sbjct: 121 IIKTRGMK---DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI 177

Query: 178 LRNPRNPSFT----------VLSTWLSRMQSSSII----------VSEENAGSLCAKICH 217
           +    + + T          +    +  M    I+              +A  +  KI  
Sbjct: 178 ID--ESYNLTELDTILFMKQICEG-IRHMHQMYILHLDLKPENILCVNRDAKQI--KIID 232

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
           FG A            K+    GT  ++APE      V+   D+++ GV+   LLSG
Sbjct: 233 FGLARRY-----KPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 28/178 (15%), Positives = 64/178 (35%), Gaps = 31/178 (17%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADC 177
            + +R+  +     ++   ++V+        +I L     + +   L+ E+ +G  +   
Sbjct: 61  FLKKRRRGQD-CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSL 119

Query: 178 LRNPRNPSFT----------VLSTWLSRMQSSSII-----------VSEENAGSLCAKIC 216
                    +          +L   +  +  ++I+            S    G +  KI 
Sbjct: 120 CLPELAEMVSENDVIRLIKQILEG-VYYLHQNNIVHLDLKPQNILLSSIYPLGDI--KIV 176

Query: 217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
            FG +   G      + ++ +I GT  Y+APE      +T   D++  G++   LL+ 
Sbjct: 177 DFGMSRKIGH-----ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 40/193 (20%), Positives = 61/193 (31%), Gaps = 62/193 (32%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD-- 176
            I + + +    +EQ+   + V+    H ++IK+       +  Y+V E   G  L +  
Sbjct: 54  TINKDRSQV--PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111

Query: 177 CLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKI------CH------------- 217
                R  +                  SE     L  ++       H             
Sbjct: 112 VSAQARGKAL-----------------SEGYVAELMKQMMNALAYFHSQHVVHKDLKPEN 154

Query: 218 ----------------FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDV 261
                           FG AEL                GT  YMAPE      VT KCD+
Sbjct: 155 ILFQDTSPHSPIKIIDFGLAELFKS-----DEHSTNAAGTALYMAPE-VFKRDVTFKCDI 208

Query: 262 YAFGVVVLELLSG 274
           ++ GVV+  LL+G
Sbjct: 209 WSAGVVMYFLLTG 221

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 11/72 (15%)

Query: 214 KICHFGTA----------ELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVY 262
           KI  FG A          +L  +     S  +    GT  Y+A E    +G   +K D+Y
Sbjct: 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215

Query: 263 AFGVVVLELLSG 274
           + G++  E++  
Sbjct: 216 SLGIIFFEMIYP 227

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 49/184 (26%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANL--- 174
           II + K           E + ++ R   H ++I L      G   Y+V E + G  L   
Sbjct: 54  IIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDK 106

Query: 175 ------------ADCLRNPRNPSFTVLSTWLSRMQSSSII------------VSEENAGS 210
                       +  L        T+  T +  + +  ++                N  S
Sbjct: 107 ILRQKFFSEREASAVLF-------TITKT-VEYLHAQGVVHRDLKPSNILYVDESGNPES 158

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
           +  +IC FG A+        E+G +     T  ++APE          CD+++ GV++  
Sbjct: 159 I--RICDFGFAKQLRA----ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212

Query: 271 LLSG 274
           +L+G
Sbjct: 213 MLTG 216

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 43.7 bits (104), Expect = 5e-05
 Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 42/182 (23%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL---- 174
           II  +KL    D ++L     +  +  H ++++L  +    +  YLV++ V+G  L    
Sbjct: 38  IINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 96

Query: 175 -----------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSLC 212
                      + C++        +L + ++   S+ I+            S+    ++ 
Sbjct: 97  VAREFYSEADASHCIQ-------QILES-IAYCHSNGIVHRNLKPENLLLASKAKGAAV- 147

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
            K+  FG A    +     S   +   GT GY++PE       ++  D++A GV++  LL
Sbjct: 148 -KLADFGLAIEVND-----SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201

Query: 273 SG 274
            G
Sbjct: 202 VG 203

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 193 LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPE---- 248
           L    S      +  A +L   I  FG  +       +    +N   GT G+ APE    
Sbjct: 147 LVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE 206

Query: 249 ---FQASGVVTQKCDVYAFGVVVLELLSG 274
               Q    +T+  D+++ G V   +LS 
Sbjct: 207 SNNLQTKRRLTRSIDIFSMGCVFYYILSK 235

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 46/250 (18%), Positives = 98/250 (39%), Gaps = 40/250 (16%)

Query: 53  YYHNSNTSSVINSSSSLQTLKKSLPENPHIYHLSEICAATN---NF-LAKKFTSSSASAS 108
           ++H+ ++S V   + +L      +        L  +    +         K    S    
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIV 61

Query: 109 WRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY 166
                +  G+ V +    LR+    E L   + ++    H +++++  + + G   +++ 
Sbjct: 62  CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLM 121

Query: 167 EHVSGANLADCLRNPRNPSF---TVLSTWLSRMQ-------------SSSIIVSEENAGS 210
           E + G  L D +   R       TV    L  +              S SI+++ +  G 
Sbjct: 122 EFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD--GR 179

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQ-----KCDVYAFG 265
              K+  FG    C ++S  +  K   + GT  +MAPE     V+++     + D+++ G
Sbjct: 180 --VKLSDFG---FCAQIS-KDVPKRKSLVGTPYWMAPE-----VISRSLYATEVDIWSLG 228

Query: 266 VVVLELLSGE 275
           ++V+E++ GE
Sbjct: 229 IMVIEMVDGE 238

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 43.4 bits (103), Expect = 6e-05
 Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 34/182 (18%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G++V I Q  L++    E +   + V+  + + +++  L + + G+  ++V E+++G +L
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

Query: 175 ADCLRNPRNPSF---TVLSTWLSRMQ-------------SSSIIVSEENAGSLCAKICHF 218
            D +            V    L  ++             S +I++  +  GS   K+  F
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD--GS--VKLTDF 160

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQ-----KCDVYAFGVVVLELLS 273
           G    C +++  E  K + + GT  +MAPE     VVT+     K D+++ G++ +E++ 
Sbjct: 161 G---FCAQIT-PEQSKRSTMVGTPYWMAPE-----VVTRKAYGPKVDIWSLGIMAIEMIE 211

Query: 274 GE 275
           GE
Sbjct: 212 GE 213

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 42.6 bits (101), Expect = 9e-05
 Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 69/195 (35%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           +I +   +   D   +   + ++ +  H +++KL       +  Y+V E  +G  L D  
Sbjct: 54  VINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD-- 110

Query: 179 RNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKI------CH--------------- 217
              +   F                 SE +A  +  ++       H               
Sbjct: 111 EIIKRKRF-----------------SEHDAARIIKQVFSGITYMHKHNIVHRDLKPENIL 153

Query: 218 --------------FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV----TQKC 259
                         FG +    +     + K+    GT  Y+APE     V+     +KC
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQ-----NTKMKDRIGTAYYIAPE-----VLRGTYDEKC 203

Query: 260 DVYAFGVVVLELLSG 274
           DV++ GV++  LLSG
Sbjct: 204 DVWSAGVILYILLSG 218

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 44/350 (12%), Positives = 91/350 (26%), Gaps = 115/350 (32%)

Query: 2   CK------SKRSTDMITPRRRCR-SSRPSKCSFNSSKSSS------NDSSSD-PSSSTL- 46
           CK       K+ TD ++       S      +    +  S      +    D P      
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 47  -------------NFSST-NYYHNSNTSSVINS-SSSLQTLK--------KSL---PENP 80
                        +  +T + + + N   +     SSL  L+          L   P + 
Sbjct: 326 NPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSA 385

Query: 81  HI---------YHLSEICAATNNFLAKKFTSSSASASW--RGTIRGKDVIIFQRKLRRSL 129
           HI         + + +        +  K    S         TI    +     +L+  L
Sbjct: 386 HIPTILLSLIWFDVIKSDVMV---VVNKLHKYSLVEKQPKESTISIPSI---YLELKVKL 439

Query: 130 DLE-----QLRERLSVICRSHHSSLIKLLGACVSG-NCGYLVYEHVSGANLADCLRNPRN 183
           + E      + +  ++        LI      +      ++ + H+      +     R 
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPP---YLDQYFYSHIGH-HLKNIEHPE-----RM 490

Query: 184 PSFTVLST---WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEG 240
             F ++     +L                    KI H  TA      SG+    + +++ 
Sbjct: 491 TLFRMVFLDFRFLE------------------QKIRHDSTAWNA---SGSILNTLQQLKF 529

Query: 241 TRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR 290
            + Y+                Y        L++   +L F+     +   
Sbjct: 530 YKPYI----------CDNDPKYE------RLVN--AILDFLPKIEENLIC 561

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 27/165 (16%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFT-- 187
           + E+ R  ++V+    H ++++   +       Y+V ++  G +L   +   +   F   
Sbjct: 66  EREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED 125

Query: 188 VLSTWLS----------------R-MQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN 230
            +  W                  R ++S +I ++++       ++  FG A     V  +
Sbjct: 126 QILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG----TVQLGDFGIAR----VLNS 177

Query: 231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE 275
                    GT  Y++PE   +     K D++A G V+ EL + +
Sbjct: 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 71/195 (36%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
            I +  +    D+++ ++ + ++    H ++I+L          YLV E  +G  L +  
Sbjct: 41  KIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFE-- 95

Query: 179 RNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKI------CH--------------- 217
           R      F                  E +A  +   +      CH               
Sbjct: 96  RVVHKRVF-----------------RESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFL 138

Query: 218 --------------FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVV----TQKC 259
                         FG A             +    GT  Y++P+     V+      +C
Sbjct: 139 FLTDSPDSPLKLIDFGLAARFKP-----GKMMRTKVGTPYYVSPQ-----VLEGLYGPEC 188

Query: 260 DVYAFGVVVLELLSG 274
           D ++ GV++  LL G
Sbjct: 189 DEWSAGVMMYVLLCG 203

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 32/181 (17%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLL------GACVSGNCGYLVYEHVSGA 172
              Q    +  + E+    + ++ + +H +++               +   L  E+  G 
Sbjct: 46  QCRQELSPK--NRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG 103

Query: 173 NLADCLRNPRNPSF-------TVLSTWLSRMQ---SSSI---------IVSEENAGSLCA 213
           +L   L    N          T+LS   S ++    + I         IV +     L  
Sbjct: 104 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIH 163

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           KI   G A+       ++     +  GT  Y+APE       T   D ++FG +  E ++
Sbjct: 164 KIIDLGYAKEL-----DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218

Query: 274 G 274
           G
Sbjct: 219 G 219

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 14/69 (20%)

Query: 214 KICHFGTAELCGEVSGN--ESGKVNKIEGTRGYMAPEFQASGVVTQ-----KCDVYAFGV 266
           K+C FG       +SG   +    ++  G   YMAPE       T+     + DV++ G+
Sbjct: 165 KLCDFG-------ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGI 217

Query: 267 VVLELLSGE 275
            ++EL +G+
Sbjct: 218 SLVELATGQ 226

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 37/183 (20%), Positives = 67/183 (36%), Gaps = 43/183 (23%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGANL--- 174
           II  +KL    D ++L      ICR   H ++++L  +       YL+++ V+G  L   
Sbjct: 43  IINTKKLSAR-DHQKLEREAR-ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFED 100

Query: 175 ------------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSL 211
                       + C++        +L   +       ++            S+    ++
Sbjct: 101 IVAREYYSEADASHCIQ-------QILEA-VLHCHQMGVVHRNLKPENLLLASKLKGAAV 152

Query: 212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
             K+  FG A         E        GT GY++PE        +  D++A GV++  L
Sbjct: 153 --KLADFGLAIEVE----GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL 206

Query: 272 LSG 274
           L G
Sbjct: 207 LVG 209

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 19/73 (26%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-----------GVVTQKCDVY 262
            +  F              G       +RG+  PE +A             ++T   D +
Sbjct: 246 FLTGFEHLV--------RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAW 297

Query: 263 AFGVVVLELLSGE 275
           A G+V+  +   +
Sbjct: 298 ALGLVIYWIWCAD 310

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 47/183 (25%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANL--- 174
           II +R           ++ ++ +     H +++KL          +LV E ++G  L   
Sbjct: 43  IISKRME------ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFER 96

Query: 175 ------------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSL 211
                       +  +R        ++S  +S M    ++             E +   +
Sbjct: 97  IKKKKHFSETEASYIMR-------KLVSA-VSHMHDVGVVHRDLKPENLLFTDENDNLEI 148

Query: 212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
             KI  FG A L       ++  +     T  Y APE        + CD+++ GV++  +
Sbjct: 149 --KIIDFGFARLKPP----DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM 202

Query: 272 LSG 274
           LSG
Sbjct: 203 LSG 205

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           K+  FG A+   +        +     T  Y+APE        + CD+++ GV++  LL 
Sbjct: 171 KLTDFGFAKETTQ------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 224

Query: 274 G 274
           G
Sbjct: 225 G 225

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 45/271 (16%), Positives = 81/271 (29%), Gaps = 50/271 (18%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG--YLVYEHVSGANLAD 176
           +       R +D+ Q+RE   V+ + +H +++KL             L+ E     +L  
Sbjct: 41  VFNNISFLRPVDV-QMRE-FEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYT 98

Query: 177 CLRNPRNPSF-------TVLSTWLSRMQ---SSSII----------VSEENAGSLCAKIC 216
            L  P N           VL   +  M     + I+                G    K+ 
Sbjct: 99  VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158

Query: 217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVV-------TQKCDVYAFGVVV 268
            FG A    +       +   + GT  Y+ P+ ++ + +            D+++ GV  
Sbjct: 159 DFGAARELED-----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

Query: 269 LELLSGEEVLKFVFDEGIDGYRRVSVVDK--------ASEAVAGGVGGVRKW-VDRRLKD 319
               +G       F       R   V+ K        A   V     G   W  D  +  
Sbjct: 214 YHAATG----SLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSC 269

Query: 320 SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
           S    +   +  +    ++ D  K     Q 
Sbjct: 270 SLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 25/193 (12%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           ++F+ +L ++    QLR  + +     H ++++L G        YL+ E+     +   L
Sbjct: 41  VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 100

Query: 179 RNPRNPS-------FTVLSTWLSRMQSSSII---VSEEN-----AGSLCAKICHFGTAEL 223
           +              T L+  LS   S  +I   +  EN     AG L  KI  FG +  
Sbjct: 101 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGEL--KIADFGWSVH 158

Query: 224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFD 283
                   S +   + GT  Y+ PE     +  +K D+++ GV+  E L G+    F  +
Sbjct: 159 ------APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEAN 210

Query: 284 EGIDGYRRVSVVD 296
              + Y+R+S V+
Sbjct: 211 TYQETYKRISRVE 223

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 33/137 (24%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           KI  FG             GK  + +GT  YM+PE  +S    ++ D+YA G+++ ELL 
Sbjct: 162 KIGDFGLVTSL-----KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216

Query: 274 GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG 333
               +     E    +  +                                  +K   L 
Sbjct: 217 ----VCDTAFETSKFFTDL------------------------RDGIISDIFDKKEKTLL 248

Query: 334 LQCVDEDPGKRPDMRQV 350
            + + + P  RP+  ++
Sbjct: 249 QKLLSKKPEDRPNTSEI 265

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 13/68 (19%)

Query: 214 KICHFGTAELCGEVSGN--ESGKVNKIEGTRGYMAPE----FQASGVVTQKCDVYAFGVV 267
           K+C FG       +SG   +    +   G + YMAPE           + K D+++ G+ 
Sbjct: 150 KMCDFG-------ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 202

Query: 268 VLELLSGE 275
           ++EL    
Sbjct: 203 MIELAILR 210

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 39/194 (20%), Positives = 74/194 (38%), Gaps = 45/194 (23%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY 166
              +GT   K   +  + L++++D + +R  + V+ R  H ++IKL     +     LV 
Sbjct: 72  CKQKGT--QKPYAL--KVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127

Query: 167 EHVSGANL---------------ADCLRNPRNPSFTVLSTWLSRMQSSSII--------- 202
           E V+G  L               AD ++        +L   ++ +  + I+         
Sbjct: 128 ELVTGGELFDRIVEKGYYSERDAADAVK-------QILEA-VAYLHENGIVHRDLKPENL 179

Query: 203 --VSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCD 260
              +      L  KI  FG +++           +  + GT GY APE         + D
Sbjct: 180 LYATPAPDAPL--KIADFGLSKIVEH-----QVLMKTVCGTPGYCAPEILRGCAYGPEVD 232

Query: 261 VYAFGVVVLELLSG 274
           +++ G++   LL G
Sbjct: 233 MWSVGIITYILLCG 246

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 37/186 (19%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG--YLVYEHVSGANLAD 176
           +       R +D+ Q+RE   V+ + +H +++KL             L+ E     +L  
Sbjct: 41  VFNNISFLRPVDV-QMRE-FEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYT 98

Query: 177 CLRNPRNPSF-------TVLSTWLSRMQ---SSSII----------VSEENAGSLCAKIC 216
            L  P N           VL   +  M     + I+                G    K+ 
Sbjct: 99  VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158

Query: 217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVV-------TQKCDVYAFGVVV 268
            FG A    +       +   + GT  Y+ P+ ++ + +            D+++ GV  
Sbjct: 159 DFGAARELED-----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213

Query: 269 LELLSG 274
               +G
Sbjct: 214 YHAATG 219

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 13/68 (19%)

Query: 214 KICHFGTAELCGEVSGN--ESGKVNKIEGTRGYMAPE----FQASGVVTQKCDVYAFGVV 267
           K+C FG       +SG   +S    +  G R YMAPE      +      + DV++ G+ 
Sbjct: 166 KLCDFG-------ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218

Query: 268 VLELLSGE 275
           + EL +G 
Sbjct: 219 LYELATGR 226

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 49/172 (28%)

Query: 201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCD 260
           I++SE+N      KIC FG A    +          ++     +MAPE     V T + D
Sbjct: 224 ILLSEKN----VVKICDFGLARDIYKDPDYVRKGDARLPLK--WMAPETIFDRVYTIQSD 277

Query: 261 VYAFGVVVLELLS-----------GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV 309
           V++FGV++ E+ S            EE  + +     +G R    +              
Sbjct: 278 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTR----MRAPDYT-------- 321

Query: 310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES 361
                         E+ + M    L C   +P +RP   ++   +  +   +
Sbjct: 322 ------------TPEMYQTM----LDCWHGEPSQRPTFSELVEHLGNLLQAN 357

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 44/183 (24%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGANL--- 174
           II  +KL    D ++L      ICR   H ++++L  +    +  YLV++ V+G  L   
Sbjct: 61  IINTKKLSAR-DFQKLEREAR-ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 118

Query: 175 ------------ADCLRNPRNPSFTVLSTWLSRMQSSSII-----------VSEENAGSL 211
                       + C++        +L + ++   S+ I+            S+    ++
Sbjct: 119 IVAREFYSEADASHCIQ-------QILES-IAYCHSNGIVHRNLKPENLLLASKAKGAAV 170

Query: 212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
             K+  FG A    +     S   +   GT GY++PE       ++  D++A GV++  L
Sbjct: 171 --KLADFGLAIEVND-----SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 223

Query: 272 LSG 274
           L G
Sbjct: 224 LVG 226

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 40.7 bits (96), Expect = 5e-04
 Identities = 35/186 (18%), Positives = 73/186 (39%), Gaps = 38/186 (20%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADC 177
           II ++         ++   + ++ +   H ++++L+      +  YLV+E + G ++   
Sbjct: 45  IIEKQPGH---IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS- 100

Query: 178 LRNPRNPSFT----------VLSTWLSRMQSSSII-----------VSEENAGSLCAKIC 216
               +   F           V S  L  + +  I                    +  KIC
Sbjct: 101 -HIHKRRHFNELEASVVVQDVASA-LDFLHNKGIAHRDLKPENILCEHPNQVSPV--KIC 156

Query: 217 HFGTA---ELCGEVSGNESGKVNKIEGTRGYMAPE-----FQASGVVTQKCDVYAFGVVV 268
            F      +L G+ S   + ++    G+  YMAPE      + + +  ++CD+++ GV++
Sbjct: 157 DFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

Query: 269 LELLSG 274
             LLSG
Sbjct: 217 YILLSG 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	381
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	99.98
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.87
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.69
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.34
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.02
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.75
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.48
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.36
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.82
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.4
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.39
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.35
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.66
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.31
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.97
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.76
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.29
3ats_A	357	Putative uncharacterized protein; hypothetical pro	94.04
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.53
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	91.21
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	90.82
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	90.02
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	89.45
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	85.24
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	83.13
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	82.46
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	81.69

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.1e-53  Score=391.21  Aligned_cols=235  Identities=15%  Similarity=0.227  Sum_probs=179.3

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .++||+|+||+||+|++.       +..||||+++.......++|.+|+++|++|+|||||+++|+|.+.+.+|||||||
T Consensus        46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~  125 (329)
T 4aoj_A           46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM  125 (329)
T ss_dssp             EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            567999999999999874       5689999987655556788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCC---------------CCccchHH-----------------HHHHhhhcceeecccCCCccceEEcc
Q 016850          170 SGANLADCLRNPRN---------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       170 ~~gsL~~~l~~~~~---------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                      ++|+|.++|+....               +.+.++..                 +|+||||+|||++++    +++||+|
T Consensus       126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~----~~~Ki~D  201 (329)
T 4aoj_A          126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGD  201 (329)
T ss_dssp             TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT----TEEEECC
T ss_pred             CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCC----CcEEEcc
Confidence            99999999986432               33333322                 234677999999887    6799999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      ||+++.+..  ..........+||+.|||||++.+..|+.++|||||||++|||+| |+.||.....        .....
T Consensus       202 FGla~~~~~--~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~~~  271 (329)
T 4aoj_A          202 FGMSRDIYS--TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------TEAID  271 (329)
T ss_dssp             CC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--------HHHHH
T ss_pred             cccceeccC--CCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence            999987532  122223345789999999999999999999999999999999999 8999964321        11111


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .               +........|..+++++.+||.+||+.||++|||+.||++.|+.+...
T Consensus       272 ~---------------i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          272 C---------------ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             H---------------HHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             H---------------HHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            1               111123344556778999999999999999999999999999988653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.3e-52  Score=383.37  Aligned_cols=237  Identities=17%  Similarity=0.246  Sum_probs=184.7

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||+||+|++.       +..||||+++.......++|.+|+++|++|+|||||+++|+|.+++.+||||||
T Consensus        17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey   96 (299)
T 4asz_A           17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY   96 (299)
T ss_dssp             EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence            3578999999999999873       567999998665555678899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC-------------CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccc
Q 016850          169 VSGANLADCLRNPR-------------NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-------------~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                      |++|+|.++|+..+             .+++.++..+                 |+||||+|||++++    +++||+||
T Consensus        97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~----~~~Ki~DF  172 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN----LLVKIGDF  172 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEECCC
T ss_pred             CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCC----CcEEECCc
Confidence            99999999997542             3343333322                 34677999999887    67999999


Q ss_pred             ccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHH
Q 016850          219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       219 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      |+|+.....  ..........||+.|||||++.+..|+.++|||||||++|||+| |+.||.....        ..+...
T Consensus       173 Gla~~~~~~--~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~~~~  242 (299)
T 4asz_A          173 GMSRDVYST--DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVIEC  242 (299)
T ss_dssp             SCHHHHTGG--GCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHH
T ss_pred             ccceecCCC--CceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHH
Confidence            999875321  11222334569999999999999999999999999999999999 8999964321        111111


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                                     +........|..+++++.+||.+||+.||++|||+.+|++.|+++....
T Consensus       243 ---------------i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~  291 (299)
T 4asz_A          243 ---------------ITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS  291 (299)
T ss_dssp             ---------------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             ---------------HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence                           1111223345567789999999999999999999999999999886543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.1e-51  Score=378.79  Aligned_cols=231  Identities=18%  Similarity=0.233  Sum_probs=180.9

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .++||+|+||+||+|++.       ++.||||+++..... ..++|.+|+.+|++|+|||||+++|+|.+++.++|||||
T Consensus        31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey  110 (308)
T 4gt4_A           31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY  110 (308)
T ss_dssp             EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence            467999999999999973       468999987544332 468899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC----------------CCccchHH-----------------HHHHhhhcceeecccCCCccceEE
Q 016850          169 VSGANLADCLRNPRN----------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~----------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl  215 (381)
                      |++|+|.++|.....                +.+..+..                 +|+||||+|||++++    +++||
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~----~~~Ki  186 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK----LNVKI  186 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEE
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCC----CCEEE
Confidence            999999999975431                22222222                 234677999999987    67999


Q ss_pred             cccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhH
Q 016850          216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSV  294 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~  294 (381)
                      +|||+++.+...  .........+||+.|||||++.++.|+.++|||||||++|||+| |+.||.....        ..+
T Consensus       187 ~DFGlar~~~~~--~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--------~~~  256 (308)
T 4gt4_A          187 SDLGLFREVYAA--DYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QDV  256 (308)
T ss_dssp             CCSCCBCGGGGG--GCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------HHH
T ss_pred             CCcccceeccCC--CceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------HHH
Confidence            999999875321  22223455789999999999999999999999999999999998 8999964321        111


Q ss_pred             HHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          295 VDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ..               .+......+.|..+++.+.+||.+||+.||++|||+.||++.|+.
T Consensus       257 ~~---------------~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a  303 (308)
T 4gt4_A          257 VE---------------MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA  303 (308)
T ss_dssp             HH---------------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HH---------------HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            11               111222233456677889999999999999999999999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.1e-50  Score=368.99  Aligned_cols=236  Identities=22%  Similarity=0.338  Sum_probs=174.1

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..++||+|+||+||+|++++ .||||+++.....  ..+.|.+|+++|++|+|||||+++|++.+ +.+|||||||++|+
T Consensus        40 l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGs  117 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSS  117 (307)
T ss_dssp             EEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCB
T ss_pred             EeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCC
Confidence            36789999999999999875 5899987644332  46789999999999999999999998765 56899999999999


Q ss_pred             HHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.++|+... .+++.++..+                 |+||||+|||++++    +++||+|||+|+.....  ......
T Consensus       118 L~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~----~~~Ki~DFGla~~~~~~--~~~~~~  191 (307)
T 3omv_A          118 LYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEG----LTVKIGDFGLATVKSRW--SGSQQV  191 (307)
T ss_dssp             HHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETT----EEEEECCCSSCBC------------
T ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCC----CcEEEeeccCceecccC--Ccceee
Confidence            999997643 4554443332                 23667999999876    67999999999875321  122334


Q ss_pred             cccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          236 NKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ...+||+.|||||++.+   +.|+.++|||||||++|||+||+.||.....           .......+..+      .
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-----------~~~~~~~~~~~------~  254 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-----------RDQIIFMVGRG------Y  254 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----------HHHHHHHHHTT------C
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-----------HHHHHHHHhcC------C
Confidence            56789999999999864   4589999999999999999999999964321           11111111110      0


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      ..+. ....+..+++.+.+||.+||+.||++|||+.||++.|+.+
T Consensus       255 ~~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l  298 (307)
T 3omv_A          255 ASPD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL  298 (307)
T ss_dssp             CCCC-STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred             CCCC-cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            1111 1223446778899999999999999999999999999865

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.8e-51  Score=375.42  Aligned_cols=242  Identities=18%  Similarity=0.250  Sum_probs=190.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||||++...   .....+.+.+|+++|++|+|||||+++++|.+++.+|||||||+
T Consensus        36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~  115 (311)
T 4aw0_A           36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK  115 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence            4678999999999999985  889999997543   23356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ||+|.++|...+.+++..+..++                 +||||+|||++.+    +.+||+|||+|+.+..  .....
T Consensus       116 gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~----g~vKl~DFGla~~~~~--~~~~~  189 (311)
T 4aw0_A          116 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED----MHIQITDFGTAKVLSP--ESKQA  189 (311)
T ss_dssp             TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----SCEEECCCTTCEECCT--TTTCC
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCC----CCEEEEEcCCceecCC--CCCcc
Confidence            99999999887777766655443                 3567999999876    5699999999997642  12233


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.....           .+.......          
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----------~~~~~~i~~----------  248 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----------GLIFAKIIK----------  248 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH----------
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHc----------
Confidence            45678999999999999999999999999999999999999999964211           111111111          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH---HHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG---LVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~---~L~~~~~~~~~~~~~  367 (381)
                       .  ...+|..+++++++||.+||+.||++|||+.|+++   .+++-+.+..+|+.+
T Consensus       249 -~--~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l  302 (311)
T 4aw0_A          249 -L--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL  302 (311)
T ss_dssp             -T--CCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             -C--CCCCCcccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHh
Confidence             1  12344556788999999999999999999999753   233344455555544

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.1e-50  Score=376.11  Aligned_cols=226  Identities=16%  Similarity=0.261  Sum_probs=173.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||+||+|++.  ++.||||++.....  ...+.+.+|+++|++|+|||||++++++.+++.+|||||||+|
T Consensus        28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~g  107 (350)
T 4b9d_A           28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG  107 (350)
T ss_dssp             EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence            4578999999999999985  88999999765432  2467899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.++|...+  ..++.++..|                 |+||||+|||++.+    +.+||+|||+|+.+..    ..
T Consensus       108 g~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~----g~vKl~DFGla~~~~~----~~  179 (350)
T 4b9d_A          108 GDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD----GTVQLGDFGIARVLNS----TV  179 (350)
T ss_dssp             CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTT----CCEEECSTTEESCCCH----HH
T ss_pred             CcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCC----CCEEEcccccceeecC----Cc
Confidence            99999997543  2344333322                 34677999999877    5699999999987532    12


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|||||++.+..|+.++|||||||++|||++|++||....           ..+.......+        
T Consensus       180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----------~~~~~~~i~~~--------  240 (350)
T 4b9d_A          180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----------MKNLVLKIISG--------  240 (350)
T ss_dssp             HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----------HHHHHHHHHHT--------
T ss_pred             ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----------HHHHHHHHHcC--------
Confidence            23456789999999999999999999999999999999999999996421           11111121111        


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         . .+..+..+++++.+||.+||+.||++|||+.|+++
T Consensus       241 ---~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          241 ---S-FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ---C-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---C-CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               1 12234456788999999999999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-50  Score=384.24  Aligned_cols=227  Identities=19%  Similarity=0.263  Sum_probs=180.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..++||+|+||+||+|++.  |+.||||++........+.+.+|+.+|++|+|||||+++++|.+.+.+|||||||+||+
T Consensus       155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~  234 (423)
T 4fie_A          155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  234 (423)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred             eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence            4578999999999999995  88999999877666667789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++...+ +.+.++..++                 +||||+|||++.+    +.+||+|||+|+.+..    ......
T Consensus       235 L~~~i~~~~-l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~----g~vKl~DFGla~~~~~----~~~~~~  305 (423)
T 4fie_A          235 LTDIVTHTR-MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVSK----EVPRRK  305 (423)
T ss_dssp             HHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTT----CCEEECCCTTCEECCS----SCCCBC
T ss_pred             HHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC----CCEEEecCccceECCC----CCcccc
Confidence            999997643 5544443332                 3667888888876    5699999999987532    223345


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+||+.|||||++.+..|+.++|||||||++|||++|++||.....        .....   .....        ..+ 
T Consensus       306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~---~i~~~--------~~~-  365 (423)
T 4fie_A          306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMK---MIRDN--------LPP-  365 (423)
T ss_dssp             CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHH---HHHHS--------CCC-
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHH---HHHcC--------CCC-
Confidence            68899999999999999999999999999999999999999963211        11111   11110        011 


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ....+..+++++.+||.+||+.||++|||+.|+++
T Consensus       366 -~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          366 -RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             -CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             11223456788999999999999999999999865

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.8e-50  Score=371.74  Aligned_cols=237  Identities=18%  Similarity=0.177  Sum_probs=182.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..++||+|+||+||+|++.  |+.||||++.....     ..+|+.+|++|+|||||++++++.+++.+|||||||+||+
T Consensus        62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  136 (336)
T 4g3f_A           62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS  136 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence            3567999999999999986  88999999765332     2479999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc-ccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES-GKV  235 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~-~~~  235 (381)
                      |.++|+..+.+++..+..++                 +||||+|||++.++   ..+||+|||+|+.+........ ...
T Consensus       137 L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g---~~vKl~DFGla~~~~~~~~~~~~~~~  213 (336)
T 4g3f_A          137 LGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDG---SRAALCDFGHALCLQPDGLGKSLLTG  213 (336)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTS---CCEEECCCTTCEEC------------
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCC---CEEEEeeCCCCeEccCCCcccceecC
Confidence            99999887777766554443                 36679999998763   2599999999987643221111 123


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|++||.......        +...   ....          +
T Consensus       214 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--------~~~~---i~~~----------~  272 (336)
T 4g3f_A          214 DYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--------LCLK---IASE----------P  272 (336)
T ss_dssp             CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--------CHHH---HHHS----------C
T ss_pred             CccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHH---HHcC----------C
Confidence            45689999999999999999999999999999999999999996432211        1111   1100          0


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ......+..+++.+.+||.+||++||++|||+.|+++.|...+.+.
T Consensus       273 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          273 PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence            0011234567788999999999999999999999999999887653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.3e-50  Score=373.46  Aligned_cols=227  Identities=18%  Similarity=0.257  Sum_probs=181.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..++||+|+||+||+|++.  |+.||||++........+.+.+|+++|++|+|||||+++++|.+.+.+|||||||++|+
T Consensus        78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~  157 (346)
T 4fih_A           78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  157 (346)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred             EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence            3567999999999999995  88999999877666667789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++... .+.+..+..++                 +||||+|||++.+    +.+||+|||+|+.+..    ......
T Consensus       158 L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~----g~vKl~DFGla~~~~~----~~~~~~  228 (346)
T 4fih_A          158 LTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHD----GRVKLSDFGFCAQVSK----EVPRRK  228 (346)
T ss_dssp             HHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----CCEEECCCTTCEECCS----SSCCBC
T ss_pred             HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCC----CCEEEecCcCceecCC----CCCccc
Confidence            99999764 45544444332                 3667999999877    5699999999987532    223345


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+||+.|||||++.+..|+.++|||||||++|||++|++||.....        ......   ....        ..+ 
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~---i~~~--------~~~-  288 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--------LKAMKM---IRDN--------LPP-  288 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHH---HHHS--------SCC-
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHH---HHcC--------CCC-
Confidence            68999999999999999999999999999999999999999963211        111111   1100        001 


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ....+..+++++.+||.+||+.||++|||+.|+++
T Consensus       289 -~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          289 -RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             -CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             11223456789999999999999999999999865

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=5.8e-50  Score=363.49  Aligned_cols=225  Identities=18%  Similarity=0.277  Sum_probs=171.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe----CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS----GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lv~e~  168 (381)
                      .+.||+|+||+||+|.+.  +..||+|++.....  ...+.+.+|+++|++|+|||||+++++|.+    .+.+||||||
T Consensus        31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy  110 (290)
T 3fpq_A           31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL  110 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence            356999999999999986  67899998754432  246779999999999999999999999875    3568999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHH-------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          169 VSGANLADCLRNPRNPSFTVLST-------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~-------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |++|+|.++|.....+++..+..                   +|+||||+|||++..+   +.+||+|||+|+...    
T Consensus       111 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~---g~vKl~DFGla~~~~----  183 (290)
T 3fpq_A          111 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKR----  183 (290)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTT---SCEEECCTTGGGGCC----
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCC---CCEEEEeCcCCEeCC----
Confidence            99999999998776666544332                   3446779999997532   569999999998632    


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                        .......+||+.|||||++.+ .|+.++|||||||++|||+||++||.....           .......+..+    
T Consensus       184 --~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----------~~~~~~~i~~~----  245 (290)
T 3fpq_A          184 --ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----------AAQIYRRVTSG----  245 (290)
T ss_dssp             --TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----------HHHHHHHHTTT----
T ss_pred             --CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----------HHHHHHHHHcC----
Confidence              223456789999999998864 699999999999999999999999963221           01111111110    


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .....++..+++++.+||.+||+.||++|||+.|+++
T Consensus       246 ------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          246 ------VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ------CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  0011122234567999999999999999999999875

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.2e-49  Score=369.74  Aligned_cols=237  Identities=22%  Similarity=0.315  Sum_probs=182.9

Q ss_pred             cccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcCC-CCcceEEEEEEe-CCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHH-SSLIKLLGACVS-GNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h-~nIv~l~~~~~~-~~~~~lv  165 (381)
                      ..+.||+|+||+||+|.+.+       +.||||++...... ..+.+.+|+++|+++.| ||||+++|+|.+ ++.+|||
T Consensus        68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV  147 (353)
T 4ase_A           68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI  147 (353)
T ss_dssp             EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred             EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence            35789999999999999753       46888887544332 45679999999999965 999999999976 4678999


Q ss_pred             EeccCCCCHHHHhcCCCC----------------CCccchHH-----------------HHHHhhhcceeecccCCCccc
Q 016850          166 YEHVSGANLADCLRNPRN----------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~----------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~  212 (381)
                      ||||++|+|.++|+....                +.+..+..                 +|+||||+|||++++    ++
T Consensus       148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~----~~  223 (353)
T 4ase_A          148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NV  223 (353)
T ss_dssp             EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GC
T ss_pred             EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCC----CC
Confidence            999999999999975321                22222221                 234677999999887    67


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRR  291 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~  291 (381)
                      +||+|||+|+.+..  ..........+||+.|||||++.+..|+.++|||||||++|||+| |+.||......       
T Consensus       224 vKi~DFGlar~~~~--~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-------  294 (353)
T 4ase_A          224 VKICDFGLARDIYK--DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------  294 (353)
T ss_dssp             EEECCCGGGSCTTT--CTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-------
T ss_pred             EEECcchhhhhccc--CCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-------
Confidence            99999999987532  122223456779999999999999999999999999999999998 89999643211       


Q ss_pred             hhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          292 VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                          +.           +...+....+...|..+++++.+||.+||+.||++|||+.||++.|++++..
T Consensus       295 ----~~-----------~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          295 ----EE-----------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             ----HH-----------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HH-----------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence                01           1112222233445666788999999999999999999999999999998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.7e-49  Score=364.77  Aligned_cols=248  Identities=19%  Similarity=0.245  Sum_probs=176.2

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC----eeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN----CGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----~~~lv~e~~~~  171 (381)
                      ..+.||+|+||+||+|+++|+.||||++..... ....+..|+..+.+|+|||||+++|++.+++    .+|||||||++
T Consensus         7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~   85 (303)
T 3hmm_A            7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH   85 (303)
T ss_dssp             EEEEEEECSSSEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             EEEEEeeCCCeEEEEEEECCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence            457899999999999999999999998754322 1222344666667899999999999998653    58999999999


Q ss_pred             CCHHHHhcCCCCCCccch-------------------------HHHHHHhhhcceeecccCCCccceEEccccccccccc
Q 016850          172 ANLADCLRNPRNPSFTVL-------------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~-------------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      |+|.++|+... ..+...                         ..+|+||||+|||++.+    +++||+|||+|+....
T Consensus        86 gsL~~~l~~~~-l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~----~~~Ki~DFGla~~~~~  160 (303)
T 3hmm_A           86 GSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN----GTCCIADLGLAVRHDS  160 (303)
T ss_dssp             CBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTT----SCEEECCCTTCEEEET
T ss_pred             CcHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCC----CCEEEEeCCCCccccC
Confidence            99999998653 222211                         23466788999999887    6699999999987643


Q ss_pred             CCCCccccccccCCCccccchhhhcCC------CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch----hHHH
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASG------VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV----SVVD  296 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~----~~~~  296 (381)
                      ............+||+.|||||++.+.      .++.++|||||||++|||+||.+||........ ++...    ....
T Consensus       161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~-p~~~~~~~~~~~~  239 (303)
T 3hmm_A          161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVPSDPSVE  239 (303)
T ss_dssp             TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCC-TTTTTSCSSCCHH
T ss_pred             CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccc-cchhcccccchHH
Confidence            222222233457899999999998754      478899999999999999999998864333211 11110    1111


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYP-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .....+          ....+++..|     ..+++.+.+|+.+||+.||++||||.||++.|+++..+
T Consensus       240 ~~~~~~----------~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          240 EMRKVV----------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHH----------TTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHH----------hcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            111111          1122222222     34677899999999999999999999999999988654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.2e-49  Score=363.33  Aligned_cols=241  Identities=19%  Similarity=0.209  Sum_probs=180.6

Q ss_pred             cccccccCCCceEEEEEEC-----CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||+||+|+..     ++.||+|++.....  ....++.+|+++|++|+|||||++++++.+++.+||||||
T Consensus        28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy  107 (304)
T 3ubd_A           28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF  107 (304)
T ss_dssp             EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred             EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence            4678999999999999872     56899998754322  2345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      |+||+|.++|...+.+++..+..++                 +||||+|||++.+    +.+||+|||+|+....    .
T Consensus       108 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~----g~vKl~DFGla~~~~~----~  179 (304)
T 3ubd_A          108 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE----GHIKLTDFGLSKESID----H  179 (304)
T ss_dssp             CTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT----SCEEEESSEEEEC--------
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCC----CCEEecccccceeccC----C
Confidence            9999999999887777766554433                 3667999999887    5699999999986432    2


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......+||+.|||||++.+..|+.++|||||||++|||++|++||.....           .+......         
T Consensus       180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----------~~~~~~i~---------  239 (304)
T 3ubd_A          180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----------KETMTMIL---------  239 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH---------
T ss_pred             CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----------HHHHHHHH---------
Confidence            2234567899999999999999999999999999999999999999964221           11111111         


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH--HHHHHHHHHHHHhhhhhhhc
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR--QVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~--evl~~L~~~~~~~~~~~~~~  368 (381)
                        ..  ...+|..+++++.+||.+||+.||++|||+.  .+-+.|++-+.+..+|+.+.
T Consensus       240 --~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~  294 (304)
T 3ubd_A          240 --KA--KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLY  294 (304)
T ss_dssp             --HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHH
T ss_pred             --cC--CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHH
Confidence              11  1234556778999999999999999999964  23444556666667776653

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=3.6e-48  Score=348.76  Aligned_cols=223  Identities=17%  Similarity=0.170  Sum_probs=165.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||+|++....   ....+++.+|+++|++|+|||||++++++.+.+.+||||||| 
T Consensus        17 i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-   95 (275)
T 3hyh_A           17 IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-   95 (275)
T ss_dssp             EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-
Confidence            5678999999999999985  8899999875432   224678999999999999999999999999999999999999 


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.++|.....+++..+..++.                 ||||+|||++.+    +.+||+|||+|+....     ..
T Consensus        96 ~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~----~~vkl~DFGla~~~~~-----~~  166 (275)
T 3hyh_A           96 GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEH----LNVKIADFGLSNIMTD-----GN  166 (275)
T ss_dssp             CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT----CCEEECCSSCC------------
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCC----CCEEEeecCCCeecCC-----CC
Confidence            689999998877777665554433                 567999999876    5699999999986432     22


Q ss_pred             cccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .....+||+.|||||++.+..| +.++|||||||++|||++|+.||.....           .........         
T Consensus       167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-----------~~~~~~i~~---------  226 (275)
T 3hyh_A          167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----------PVLFKNISN---------  226 (275)
T ss_dssp             --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH---------
T ss_pred             ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHc---------
Confidence            3456789999999999998776 6899999999999999999999963211           111111111         


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        .  ...+|..+++++.+||.+||+.||++|||+.|+++
T Consensus       227 --~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          227 --G--VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             --T--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --C--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence              0  12234456788999999999999999999999865

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.2e-47  Score=349.31  Aligned_cols=228  Identities=14%  Similarity=0.218  Sum_probs=159.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------------
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGN------------  160 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------------  160 (381)
                      ..+.||+|+||+||+|++.  ++.||||++...... ..+++.+|+++|++|+|||||+++++|.+.+            
T Consensus         9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~   88 (299)
T 4g31_A            9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV   88 (299)
T ss_dssp             EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence            4578999999999999985  889999987654433 4578999999999999999999999987544            


Q ss_pred             eeeEEEeccCCCCHHHHhcCCCCCCcc----------chHH----------HHHHhhhcceeecccCCCccceEEccccc
Q 016850          161 CGYLVYEHVSGANLADCLRNPRNPSFT----------VLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~~~~~~~~----------~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      .+|||||||++|+|.++|.........          +++.          +|+||||+|||++.+    +.+||+|||+
T Consensus        89 ~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~----~~vKl~DFGl  164 (299)
T 4g31_A           89 YLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD----DVVKVGDFGL  164 (299)
T ss_dssp             EEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECCCCC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCC----CcEEEccCcc
Confidence            379999999999999999876543321          1111          234677999999877    5699999999


Q ss_pred             ccccccCCCCc--------cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          221 AELCGEVSGNE--------SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       221 a~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      |+.+.......        .......+||+.|||||++.+..|+.++|||||||++|||++   ||....          
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----------  231 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----------  231 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----------
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----------
Confidence            98764322111        112345689999999999999999999999999999999996   664210          


Q ss_pred             hHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          293 SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .........           ..... +......++.+.+||.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~-----------~~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          232 ERVRTLTDV-----------RNLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHHH-----------HTTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHH-----------hcCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111111110           00000 1112334567889999999999999999999865

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-44  Score=342.13  Aligned_cols=244  Identities=16%  Similarity=0.168  Sum_probs=175.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEe------CCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVS------GNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~~~~lv  165 (381)
                      ..+.||+|+||+||+|++.  |+.||||++......  ..+++.+|+++|++|+|||||++++++..      .+.+|||
T Consensus        58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv  137 (398)
T 4b99_A           58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV  137 (398)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence            4578999999999999985  889999998654332  45678899999999999999999999764      3678999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||+ |+|.++|...+.+.+..+..++                 +||||+|||++.+    +.+||+|||+|+.+....
T Consensus       138 mE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~----~~~Ki~DFGla~~~~~~~  212 (398)
T 4b99_A          138 LDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN----CELKIGDFGMARGLCTSP  212 (398)
T ss_dssp             EECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----CCEEECCCTTCBCC----
T ss_pred             EeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCC----CCEEEeecceeeecccCc
Confidence            99995 7899999988777766554433                 3567999999877    569999999998764433


Q ss_pred             CCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                      ..........+||+.|||||++.+. .|+.++||||+||++|||++|++||.....        ......+.........
T Consensus       213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~--------~~~l~~I~~~~g~p~~  284 (398)
T 4b99_A          213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY--------VHQLQLIMMVLGTPSP  284 (398)
T ss_dssp             ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--------HHHHHHHHHHHCCCCG
T ss_pred             cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH--------HHHHHHHHHhcCCCCh
Confidence            3333445678999999999998875 569999999999999999999999974321        1111111111100000


Q ss_pred             ---------chhhhh---cccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 ---------GVRKWV---DRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ---------~~~~~~---~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                               .....+   .+.....   ..+.+++++++||.+||+.||.+|||+.|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                     000000   0000000   01134678999999999999999999999865

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=7.1e-44  Score=334.52  Aligned_cols=181  Identities=17%  Similarity=0.212  Sum_probs=140.5

Q ss_pred             hcCC-cccccccCCCceEEEEEEC-----CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           92 TNNF-LAKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      .+.| ..+.||+|+||+||+|+.+     ++.||+|++...  ....++.+|+++|+.+ +|||||+++++|.+.+++||
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l   97 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI   97 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence            3445 4678999999999999863     567899876433  3457789999999998 69999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          165 VYEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |||||++|+|.+++..   +++..+..+                 |+||||+|||++.+.   ..+||+|||+|+.....
T Consensus        98 vmE~~~g~~L~~~~~~---l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~---~~~kl~DFGla~~~~~~  171 (361)
T 4f9c_A           98 AMPYLEHESFLDILNS---LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRL---KKYALVDFGLAQGTHDT  171 (361)
T ss_dssp             EEECCCCCCHHHHHTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT---TEEEECCCTTCEECTTC
T ss_pred             EEeCCCcccHHHHHcC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCC---CeEEECcCCCCcccCCc
Confidence            9999999999999953   444443332                 346679999987642   46999999999865322


Q ss_pred             CCC------------------------ccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccc
Q 016850          228 SGN------------------------ESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKF  280 (381)
Q Consensus       228 ~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~  280 (381)
                      ...                        ........+||+.|||||++.+. .|+.++||||+||++|||++|+.||..
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            110                        11123456899999999998875 589999999999999999999999953

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.2e-43  Score=352.01  Aligned_cols=230  Identities=20%  Similarity=0.219  Sum_probs=180.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||+||+|+++  |+.||+|++........+.+.+|+++|+.|+|||||+++++|.+.+.+|||||||+||+
T Consensus       161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  240 (573)
T 3uto_A          161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE  240 (573)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence            4578999999999999985  88999999876665567889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.++|... ..+.+.++..+                 |+||||+|||++.+..  +.+||+|||+|+.+..     ....
T Consensus       241 L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~--~~vKl~DFG~a~~~~~-----~~~~  313 (573)
T 3uto_A          241 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS--NELKLIDFGLTAHLDP-----KQSV  313 (573)
T ss_dssp             HHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC--CCEEECCCSSCEECCT-----TSEE
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCC--CCEEEeeccceeEccC-----CCce
Confidence            99999754 34444443333                 2356788888876432  5699999999987632     2334


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|++||.....           .+........         +.
T Consensus       314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-----------~~~~~~i~~~---------~~  373 (573)
T 3uto_A          314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----------DETLRNVKSC---------DW  373 (573)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----------HHHHHHHHTT---------CC
T ss_pred             eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----------HHHHHHHHhC---------CC
Confidence            567899999999999999999999999999999999999999964321           1111111110         00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..+++++++||.+||+.||.+|||+.|+++
T Consensus       374 ~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          374 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111122346788999999999999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=4.4e-44  Score=354.32  Aligned_cols=242  Identities=15%  Similarity=0.180  Sum_probs=184.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHH---HHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRER---LSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E---~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||+||+|++.  |+.||+|++....   ......+.+|   +.+++.++|||||+++++|.+.+.+|||||
T Consensus       193 i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmE  272 (689)
T 3v5w_A          193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD  272 (689)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEe
Confidence            3567999999999999985  8899999875432   2223334444   566777899999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ||+||+|.++|...+.+++..+..++                 +||||+|||++.+    +++||+|||+|+.+..    
T Consensus       273 y~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~----G~vKL~DFGlA~~~~~----  344 (689)
T 3v5w_A          273 LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH----GHVRISDLGLACDFSK----  344 (689)
T ss_dssp             CCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT----SCEEECCCTTCEECSS----
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCC----CCEEecccceeeecCC----
Confidence            99999999999887777766554443                 3677999999887    6699999999987532    


Q ss_pred             ccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                        ....+.+||+.|||||++.+ ..|+.++|||||||++|||++|++||.......        .........       
T Consensus       345 --~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--------~~~i~~~i~-------  407 (689)
T 3v5w_A          345 --KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--------KHEIDRMTL-------  407 (689)
T ss_dssp             --CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--------HHHHHHHHH-------
T ss_pred             --CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHhhc-------
Confidence              22345789999999999975 579999999999999999999999996432211        001000110       


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHHHHHHHHHHHhhhhhhhc
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~~~~~~~~~~~~  368 (381)
                          .  ....+|..+++++++||.+||+.||.+|++.  ..+-+.+++-+.+..+|+.+.
T Consensus       408 ----~--~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~  462 (689)
T 3v5w_A          408 ----T--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVF  462 (689)
T ss_dssp             ----H--CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHH
T ss_pred             ----C--CCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHH
Confidence                1  1223455678899999999999999999984  234445677888888888763

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.8e-42  Score=319.93  Aligned_cols=264  Identities=25%  Similarity=0.391  Sum_probs=202.0

Q ss_pred             HHHHHHHhcCC-cccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCee
Q 016850           85 LSEICAATNNF-LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG  162 (381)
Q Consensus        85 ~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~  162 (381)
                      +.++..++++| ..+.||+|+||.||+|++. ++.||+|+.........+.+.+|++++++++|||||++++++.+.+..
T Consensus        31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            33444556666 4567899999999999986 789999987666555678899999999999999999999999999999


Q ss_pred             eEEEeccCCCCHHHHhcCCCC----CCccchHHH-------H----------HHhhhcceeecccCCCccceEEcccccc
Q 016850          163 YLVYEHVSGANLADCLRNPRN----PSFTVLSTW-------L----------SRMQSSSIIVSEENAGSLCAKICHFGTA  221 (381)
Q Consensus       163 ~lv~e~~~~gsL~~~l~~~~~----~~~~~~~~~-------~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a  221 (381)
                      ++||||+++|+|.+++.....    ..+..+..+       +          ++|+|+||+++.+    +.+||+|||++
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~~  186 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN----FVPKITDFGIS  186 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTT----CCEEECCCTTC
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCC----CCEEEeecccc
Confidence            999999999999999976542    333333222       2          2566888888876    56999999999


Q ss_pred             cccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      +.....  ..........||+.|+|||++.+..++.++|||||||++|||++|+.||........     .....+....
T Consensus       187 ~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~-----~~~~~~~~~~  259 (321)
T 2qkw_B          187 KKGTEL--DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-----VNLAEWAVES  259 (321)
T ss_dssp             EECSSS--SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC-----CCHHHHTHHH
T ss_pred             cccccc--cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH-----HHHHHHhhhc
Confidence            864321  112223445689999999999888999999999999999999999999975433211     1222222222


Q ss_pred             HcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ..  .+.+...+++......+..++..+.+++.+||+.||++|||+.|+++.|+.++...
T Consensus       260 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          260 HN--NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             HT--TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             cc--cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            21  23344455566666677889999999999999999999999999999999987643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=2.8e-42  Score=318.29  Aligned_cols=237  Identities=19%  Similarity=0.263  Sum_probs=175.3

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|++.++.||+|++......  ..+.+.+|+++|++++|||||++++++.+.+.+++||||+++|+|
T Consensus        42 ~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  121 (309)
T 3p86_A           42 KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL  121 (309)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBH
T ss_pred             eeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcH
Confidence            567999999999999999999999997654432  356789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCC---CCccchH-------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          175 ADCLRNPRN---PSFTVLS-------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       175 ~~~l~~~~~---~~~~~~~-------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      .+++.....   .....+.                   .+|++|+|+||+++.+    +.+||+|||+++....    ..
T Consensus       122 ~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~----~~~kL~Dfg~a~~~~~----~~  193 (309)
T 3p86_A          122 YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK----YTVKVCDFGLSRLKAS----TF  193 (309)
T ss_dssp             HHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTT----CCEEECCCC-------------
T ss_pred             HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCC----CcEEECCCCCCccccc----cc
Confidence            999987542   3332221                   3345677889999876    5699999999976422    11


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......||+.|+|||++.+..++.++|||||||++|||++|+.||......        ....   ..           
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--------~~~~---~~-----------  251 (309)
T 3p86_A          194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--------QVVA---AV-----------  251 (309)
T ss_dssp             --------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--------HHHH---HH-----------
T ss_pred             cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHH---HH-----------
Confidence            2234567999999999999999999999999999999999999999642210        0110   00           


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN  363 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~  363 (381)
                      .........+..+++.+.+||.+||+.||.+|||+.++++.|+.++.....
T Consensus       252 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p  302 (309)
T 3p86_A          252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP  302 (309)
T ss_dssp             HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred             HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence            001112234455677899999999999999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.8e-41  Score=320.63  Aligned_cols=238  Identities=22%  Similarity=0.312  Sum_probs=181.7

Q ss_pred             cccccccCCCceEEEEEEC---------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|++.         +..||+|+....... ..+.+.+|+++|+++ +|||||++++++.+.+.+|+
T Consensus        85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l  164 (370)
T 2psq_A           85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV  164 (370)
T ss_dssp             EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred             eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence            3567999999999999863         346888887544322 457799999999999 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCC----------------CCccchH-------HH----------HHHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRN----------------PSFTVLS-------TW----------LSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~----------------~~~~~~~-------~~----------~~~l~~~Nill~~~~~~~~  211 (381)
                      ||||+++|+|.++|.....                ..+..+.       ..          |+||+|+|||++.+    +
T Consensus       165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~  240 (370)
T 2psq_A          165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----N  240 (370)
T ss_dssp             EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT----C
T ss_pred             EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC----C
Confidence            9999999999999986432                2222222       22          23567999999876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++.+...  ..........||+.|+|||++.+..++.++|||||||++|||++ |+.||......      
T Consensus       241 ~~kl~DFG~a~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~------  312 (370)
T 2psq_A          241 VMKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------  312 (370)
T ss_dssp             CEEECCCSSCEETTCC--CTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------
T ss_pred             CEEEccccCCcccCcc--cceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH------
Confidence            6999999999865321  11122344567899999999999999999999999999999999 99999643211      


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                        .               +...+........+..+++.+.+||.+||+.||.+||++.|+++.|++++....
T Consensus       313 --~---------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          313 --E---------------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             --G---------------HHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             --H---------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence              1               111111222233445567889999999999999999999999999999986543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=8.9e-40  Score=300.94  Aligned_cols=264  Identities=25%  Similarity=0.415  Sum_probs=201.7

Q ss_pred             CCceeeHHHHHHHhcCCcc-------cccccCCCceEEEEEECCceEEEEEecccc----cccHHHHHHHHHHHhhcCCC
Q 016850           79 NPHIYHLSEICAATNNFLA-------KKFTSSSASASWRGTIRGKDVIIFQRKLRR----SLDLEQLRERLSVICRSHHS  147 (381)
Q Consensus        79 ~~~~~~~~~~~~~~~~f~~-------~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l~h~  147 (381)
                      ....|++.++..++++|..       +.||+|+||.||+|.++++.||+|+.....    ....+.+.+|++++++++||
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            4578999999999999954       468999999999999999999999875432    22367899999999999999


Q ss_pred             CcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCC---CCCccchHHH-------H----------HHhhhcceeecccC
Q 016850          148 SLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR---NPSFTVLSTW-------L----------SRMQSSSIIVSEEN  207 (381)
Q Consensus       148 nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~-------~----------~~l~~~Nill~~~~  207 (381)
                      ||+++++++.+.+..++||||+++|+|.+++....   ...+..+..+       +          .+|+|+||+++.+ 
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~-  169 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA-  169 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT-
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC-
Confidence            99999999999999999999999999999997532   2343332222       2          2456999999876 


Q ss_pred             CCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc
Q 016850          208 AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID  287 (381)
Q Consensus       208 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~  287 (381)
                         +.+||+|||+++.....  ..........||+.|+|||++.+ .++.++||||||+++|+|++|+.||........ 
T Consensus       170 ---~~~kl~Dfg~~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-  242 (307)
T 2nru_A          170 ---FTAKISDFGLARASEKF--AQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-  242 (307)
T ss_dssp             ---CCEEECCCTTCEECCSC--SSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-
T ss_pred             ---CcEEEeecccccccccc--cccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-
Confidence               56999999999875321  11122334679999999998864 589999999999999999999999975433211 


Q ss_pred             cccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                             ..............+..++++.+ ...+...+..+.+++.+||+.||.+||++.+|++.|+++.
T Consensus       243 -------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          243 -------LLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             -------TTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             -------HHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence                   11111122222233444444443 3356778899999999999999999999999999999873

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.5e-40  Score=308.80  Aligned_cols=268  Identities=24%  Similarity=0.416  Sum_probs=203.6

Q ss_pred             CCCceeeHHHHHHHhcCCc-ccccccCCCceEEEEEEC-CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEE
Q 016850           78 ENPHIYHLSEICAATNNFL-AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLG  154 (381)
Q Consensus        78 ~~~~~~~~~~~~~~~~~f~-~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~  154 (381)
                      +....|++.++...+++|. .+.||+|+||.||+|++. ++.||+|++...... ....+.+|++++++++|||||++++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   94 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG   94 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence            4567889999999999994 567899999999999875 788999987554322 3347899999999999999999999


Q ss_pred             EEEeCCeeeEEEeccCCCCHHHHhcCCCC----CCccchH--------------------HHHHHhhhcceeecccCCCc
Q 016850          155 ACVSGNCGYLVYEHVSGANLADCLRNPRN----PSFTVLS--------------------TWLSRMQSSSIIVSEENAGS  210 (381)
Q Consensus       155 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----~~~~~~~--------------------~~~~~l~~~Nill~~~~~~~  210 (381)
                      ++.+.+..++||||+++|+|.+++.....    ..+..+.                    .+|++|+|+|||++.+    
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~----  170 (326)
T 3uim_A           95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE----  170 (326)
T ss_dssp             EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT----
T ss_pred             EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC----
Confidence            99999999999999999999999987543    3322221                    1233556888888776    


Q ss_pred             cceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccccc
Q 016850          211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       211 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~  290 (381)
                      +.+||+|||+++....   ..........||+.|+|||++.+..++.++|||||||++|||++|+.||........   .
T Consensus       171 ~~~kl~Dfg~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~  244 (326)
T 3uim_A          171 FEAVVGDFGLAKLMDY---KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND---D  244 (326)
T ss_dssp             CCEEECCCSSCEECCS---SSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTT---S
T ss_pred             CCEEeccCccccccCc---ccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccc---c
Confidence            5699999999987532   222234456699999999999888899999999999999999999999963221111   1


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      .....++......  ...+....+.......+...++.+.+++.+||+.||.+|||+.||++.|+..
T Consensus       245 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          245 DVMLLDWVKGLLK--EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             CSBHHHHHTTTTS--SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             chhHHHHHHHHhh--chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            1122222222221  1334445555666677888999999999999999999999999999999853

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.3e-40  Score=309.27  Aligned_cols=237  Identities=21%  Similarity=0.308  Sum_probs=179.8

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.     +..||||+...... ...+.+.+|+++|++++|||||++++++.+.+..++||||++
T Consensus        54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  133 (325)
T 3kul_A           54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME  133 (325)
T ss_dssp             EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred             eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence            467999999999999984     34599998765432 245779999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++... .......+..++                 +||+|+|||++.+    +.+||+|||+++.+.... ...
T Consensus       134 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~~~-~~~  208 (325)
T 3kul_A          134 NGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN----LVCKVSDFGLSRVLEDDP-DAA  208 (325)
T ss_dssp             TCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCSSCEECC-----CC
T ss_pred             CCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCC----CCEEECCCCcccccccCc-cce
Confidence            99999999765 344444433322                 2566999999876    569999999998764321 111


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......        ...               .
T Consensus       209 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~---------------~  265 (325)
T 3kul_A          209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--------DVI---------------S  265 (325)
T ss_dssp             EECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHH---------------H
T ss_pred             eeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--------HHH---------------H
Confidence            12234556889999999998899999999999999999999 99999642210        111               1


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      .+........+..+++.+.+|+.+||+.||.+||++.+|++.|+.++...
T Consensus       266 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          266 SVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            11112223334456788999999999999999999999999999997643

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=8.9e-41  Score=310.01  Aligned_cols=247  Identities=20%  Similarity=0.230  Sum_probs=179.7

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC----eeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN----CGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|++.++.||||++.... .......+|+.+|++++|||||++++++.+..    .+++|||||++
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~  106 (322)
T 3soc_A           28 LLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK  106 (322)
T ss_dssp             EEEEEECSTTCEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred             hhheecccCceEEEEEEECCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence            35679999999999999999999999975432 23455677999999999999999999998743    47999999999


Q ss_pred             CCHHHHhcCCCCCCccch---------------------------HHHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          172 ANLADCLRNPRNPSFTVL---------------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~---------------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      |+|.+++.... .++..+                           ..+|+||+|+|||++.+    +.+||+|||+++.+
T Consensus       107 g~L~~~l~~~~-~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~----~~~kL~DFg~a~~~  181 (322)
T 3soc_A          107 GSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN----LTACIADFGLALKF  181 (322)
T ss_dssp             CBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTT----CCEEECCCTTCEEE
T ss_pred             CCHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCC----CeEEEccCCccccc
Confidence            99999997643 332222                           22344567889998876    56999999999876


Q ss_pred             ccCCCCccccccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch----hHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV----SVV  295 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~----~~~  295 (381)
                      ....  .........||+.|+|||++.+     ..++.++|||||||++|||++|+.||.........++...    ...
T Consensus       182 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  259 (322)
T 3soc_A          182 EAGK--SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL  259 (322)
T ss_dssp             CTTS--CCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred             cccc--CccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence            4321  2222344679999999999886     3567789999999999999999999976544332221110    000


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .......          ......+..     ....++.+.+||.+||+.||++|||+.||++.|+++...
T Consensus       260 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          260 EDMQEVV----------VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHH----------TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhhh----------hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            1111111          111111111     224667899999999999999999999999999998653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=304.20  Aligned_cols=240  Identities=18%  Similarity=0.282  Sum_probs=182.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.  +..||+|+.........+.+.+|+++|++++|||||++++++.+++..++||||+++|+
T Consensus        14 ~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~   93 (310)
T 3s95_A           14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT   93 (310)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCc
Confidence            3567999999999999985  78899998755555567889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc---
Q 016850          174 LADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES---  232 (381)
Q Consensus       174 L~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~---  232 (381)
                      |.+++... ...++..+..++                 ++|+|+||+++.+    +.+||+|||+++..........   
T Consensus        94 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~~~~~~~~~~  169 (310)
T 3s95_A           94 LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVREN----KNVVVADFGLARLMVDEKTQPEGLR  169 (310)
T ss_dssp             HHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTT----SCEEECCCTTCEECC----------
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCC----CCEEEeecccceecccccccccccc
Confidence            99999863 344444333332                 2456889998876    5699999999987533211110   


Q ss_pred             -------ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          233 -------GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       233 -------~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                             .......||+.|+|||++.+..++.++|||||||++|||++|..||...........                
T Consensus       170 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~----------------  233 (310)
T 3s95_A          170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG----------------  233 (310)
T ss_dssp             ----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS----------------
T ss_pred             cccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh----------------
Confidence                   111256799999999999999999999999999999999999999864333211100                


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                       .........    ..+..+++.+.+|+.+||+.||++|||+.++++.|+.+...
T Consensus       234 -~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          234 -LNVRGFLDR----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             -BCHHHHHHH----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -hhhhccccc----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence             001111111    12334456799999999999999999999999999988654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6.1e-40  Score=304.97  Aligned_cols=224  Identities=19%  Similarity=0.239  Sum_probs=176.3

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|++  .++.||+|++.....  ...+++.+|+++|+.++|||||++++++.+.+.+|+||||+++
T Consensus        19 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~   98 (328)
T 3fe3_A           19 LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG   98 (328)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCC
Confidence            357899999999999998  488999998754432  2456788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++..........+..++                 +||+|+|||++.+    +.+||+|||+++....     ...
T Consensus        99 ~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~----~~~kl~DFG~a~~~~~-----~~~  169 (328)
T 3fe3_A           99 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDAD----MNIKIADFGFSNEFTV-----GGK  169 (328)
T ss_dssp             CBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECSTTCCGGGSS-----SCG
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCC----CCEEEeeccCceecCC-----CCc
Confidence            9999999876666654443332                 3566999999876    5699999999976532     223


Q ss_pred             ccccCCCccccchhhhcCCCCC-cchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVT-QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~-~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ....+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.....           .........          
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~~~~i~~----------  228 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----------KELRERVLR----------  228 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH----------
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHh----------
Confidence            4567899999999999887764 899999999999999999999964211           111111111          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .  ....|..+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       229 -~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          229 -G--KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             -C--CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             -C--CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             1  11234446778999999999999999999999975

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=5e-40  Score=312.29  Aligned_cols=250  Identities=15%  Similarity=0.211  Sum_probs=189.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+||+|++.  ++.||+|+++.....   ..+.+.+|..+|.++ +|||||++++++.+.+.+|||||||
T Consensus        56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~  135 (396)
T 4dc2_A           56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV  135 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence            3567999999999999986  678999987654322   345688999999887 8999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.+++...+.+++..+..++                 +||||+|||++.+    +.+||+|||+++...    ...
T Consensus       136 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~----g~ikL~DFGla~~~~----~~~  207 (396)
T 4dc2_A          136 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCKEGL----RPG  207 (396)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCCC----CTT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCC----CCEEEeecceeeecc----cCC
Confidence            999999999876666655444332                 3567999999887    569999999997532    122


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..........   ....+.....+          
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~---~~~~~~~~~~i----------  274 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---QNTEDYLFQVI----------  274 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC---------CCHHHHHHHH----------
T ss_pred             CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccc---hhhHHHHHHHH----------
Confidence            33456789999999999999999999999999999999999999996432211100   00111111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH---HHHHHHHHHHHHhhhhhhhc
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR---QVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~---evl~~L~~~~~~~~~~~~~~  368 (381)
                      ...  ...+|..+++.+.+||.+||+.||.+||++.   .+.+.++.-+.+..+|..+.
T Consensus       275 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~  331 (396)
T 4dc2_A          275 LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMME  331 (396)
T ss_dssp             HHC--CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHH
T ss_pred             hcc--ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHH
Confidence            111  1234555678899999999999999999973   56777888888888887653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=8.2e-40  Score=300.09  Aligned_cols=227  Identities=17%  Similarity=0.263  Sum_probs=177.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.........+.+.+|+.++++++|||||++++++.+.+.+++|||||++|+
T Consensus        24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~  103 (297)
T 3fxz_A           24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS  103 (297)
T ss_dssp             CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCC
Confidence            3567999999999999874  78999999877666677889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.... .....+..++                 +||+|+||+++.+    +.+||+|||++.....    ......
T Consensus       104 L~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~~~  174 (297)
T 3fxz_A          104 LTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD----GSVKLTDFGFCAQITP----EQSKRS  174 (297)
T ss_dssp             HHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----CCEEECCCTTCEECCS----TTCCBC
T ss_pred             HHHHHhhcC-CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCC----CCEEEeeCCCceecCC----cccccC
Confidence            999997653 3433333222                 2566999999876    5599999999987532    222344


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .........          ...
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~~~~~~~----------~~~  233 (297)
T 3fxz_A          175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----------LRALYLIAT----------NGT  233 (297)
T ss_dssp             CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHH----------HCS
T ss_pred             CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHh----------CCC
Confidence            56899999999999999999999999999999999999999963211           111111110          001


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+..+++.+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            111224456778999999999999999999999975

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=309.99  Aligned_cols=240  Identities=22%  Similarity=0.290  Sum_probs=183.8

Q ss_pred             cccccccCCCceEEEEEEC---------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|.+.         +..||+|+....... ..+++.+|+++++++ +|||||++++++.+.+..++
T Consensus        73 i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l  152 (382)
T 3tt0_A           73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV  152 (382)
T ss_dssp             EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEE
Confidence            3577999999999999963         256899987554332 457789999999999 99999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCC----------------CCccchHHHH-----------------HHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRN----------------PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~----------------~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~  211 (381)
                      ||||+++|+|.+++.....                ..+..+..++                 +||+|+|||++.+    +
T Consensus       153 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~  228 (382)
T 3tt0_A          153 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----N  228 (382)
T ss_dssp             EEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----C
T ss_pred             EEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC----C
Confidence            9999999999999976532                3333333322                 3567999999877    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++.....  ..........||+.|+|||++.+..++.++|||||||++|||++ |..||.....       
T Consensus       229 ~~kL~DFG~a~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-------  299 (382)
T 3tt0_A          229 VMKIADFGLARDIHHI--DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-------  299 (382)
T ss_dssp             CEEECSCSCCCCSSCC--CTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------
T ss_pred             cEEEcccCcccccccc--cccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-------
Confidence            6999999999875321  11123344568899999999999999999999999999999999 9999863221       


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhh
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNW  364 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~  364 (381)
                          .+ .           ...+........+..+++.+.+|+.+||+.||.+||++.||++.|+++.....+.
T Consensus       300 ----~~-~-----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~  357 (382)
T 3tt0_A          300 ----EE-L-----------FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ  357 (382)
T ss_dssp             ----HH-H-----------HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred             ----HH-H-----------HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence                11 1           1111112222334456678999999999999999999999999999998765433

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.7e-39  Score=314.76  Aligned_cols=228  Identities=21%  Similarity=0.277  Sum_probs=179.3

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC-eeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN-CGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+.++.||||+.+...  ..+.+.+|+++|++++|||||++++++.+.+ .++||||||++|+|.
T Consensus       198 ~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~  275 (450)
T 1k9a_A          198 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV  275 (450)
T ss_dssp             EEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHH
T ss_pred             EeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHH
Confidence            4679999999999999999999999976433  5678999999999999999999999987655 789999999999999


Q ss_pred             HHhcCCCC--CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPRN--PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~~--~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      ++|.....  .....+..+                 |+||+|+|||++.+    +.+||+|||+++....       ...
T Consensus       276 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~----~~~kl~DfG~a~~~~~-------~~~  344 (450)
T 1k9a_A          276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED----NVAKVSDFGLTKEASS-------TQD  344 (450)
T ss_dssp             HHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT----SCEEECCCTTCEECC-----------
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCC----CCEEEeeCCCcccccc-------ccc
Confidence            99986543  333333222                 23566999999876    5699999999985321       112


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+++.|+|||++.+..++.++|||||||++|||++ |+.||......        .               +...+..
T Consensus       345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~---------------~~~~i~~  401 (450)
T 1k9a_A          345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------D---------------VVPRVEK  401 (450)
T ss_dssp             --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--------T---------------HHHHHHT
T ss_pred             CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------H---------------HHHHHHc
Confidence            3467899999999999999999999999999999998 99999643221        1               1111122


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ......+..+++.+.+||.+||+.||.+|||+.++++.|+++...
T Consensus       402 ~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          402 GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            223344556778999999999999999999999999999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=6.9e-40  Score=308.31  Aligned_cols=248  Identities=21%  Similarity=0.288  Sum_probs=183.0

Q ss_pred             HHHHHHhcCC-cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEE
Q 016850           86 SEICAATNNF-LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGA  155 (381)
Q Consensus        86 ~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~  155 (381)
                      .+.....+.| ..+.||+|+||.||+|++.       ++.||||+....... ..+.+.+|+++|.++ +|||||+++++
T Consensus        15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~   94 (359)
T 3vhe_A           15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA   94 (359)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence            3333334444 4677999999999999852       478999987654332 456799999999999 89999999999


Q ss_pred             EEeCC-eeeEEEeccCCCCHHHHhcCCCC---------------------------------------------------
Q 016850          156 CVSGN-CGYLVYEHVSGANLADCLRNPRN---------------------------------------------------  183 (381)
Q Consensus       156 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------  183 (381)
                      +.+.+ .+++|||||++|+|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            98755 48999999999999999987542                                                   


Q ss_pred             ---------------CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          184 ---------------PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       184 ---------------~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                                     ..+..+..+                 |+||+|+||+++.+    +.+||+|||+++.+...  ..
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~----~~~kl~Dfg~a~~~~~~--~~  248 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIYKD--PD  248 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEECCCGGGSCTTSC--TT
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC----CcEEEEeccceeeeccc--cc
Confidence                           222222222                 23567999999876    56999999999865321  12


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........||+.|+|||++.+..++.++|||||||++|||++ |+.||.......       .               +.
T Consensus       249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~---------------~~  306 (359)
T 3vhe_A          249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-------E---------------FC  306 (359)
T ss_dssp             CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-------H---------------HH
T ss_pred             chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-------H---------------HH
Confidence            223345678999999999998899999999999999999998 999996432210       0               11


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ..+........+..+++.+.+++.+||+.||.+|||+.|+++.|++++...
T Consensus       307 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          307 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            111111222334456678999999999999999999999999999998653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2e-39  Score=302.50  Aligned_cols=238  Identities=17%  Similarity=0.182  Sum_probs=183.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|+..  ++.||+|++...   .....+.+.+|+.+|+.++|||||++++++.+.+.+|+||||++
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~   88 (337)
T 1o6l_A            9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN   88 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            3567999999999999985  789999987543   22356788999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..+.                 ++|+|+|||++.+    +.+||+|||+++....    ...
T Consensus        89 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----g~vkL~DFG~a~~~~~----~~~  160 (337)
T 1o6l_A           89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCKEGIS----DGA  160 (337)
T ss_dssp             TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCSCC----TTC
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCC----CCEEEeeccchhhccc----CCC
Confidence            99999999876666554443332                 3566999999877    5699999999975321    222


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........           
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----------~~~~~~i~-----------  218 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----------ERLFELIL-----------  218 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH-----------
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----------HHHHHHHH-----------
Confidence            34567899999999999999999999999999999999999999963211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhhc
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      ..  ...++..+++.+.+||.+||+.||.+||     ++.|+   +++-+....+|..+.
T Consensus       219 ~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei---~~h~~f~~~~~~~~~  273 (337)
T 1o6l_A          219 ME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV---MEHRFFLSINWQDVV  273 (337)
T ss_dssp             HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHH---HTSGGGTTCCHHHHH
T ss_pred             cC--CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHH---HcCCCcCCCCHHHHH
Confidence            11  1223445678899999999999999999     77776   445556666776553

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1e-38  Score=296.01  Aligned_cols=244  Identities=17%  Similarity=0.230  Sum_probs=186.4

Q ss_pred             CCceeeHHHHHHHhcCCc-----------ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC
Q 016850           79 NPHIYHLSEICAATNNFL-----------AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH  145 (381)
Q Consensus        79 ~~~~~~~~~~~~~~~~f~-----------~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~  145 (381)
                      ....++++++..+++...           .+.||+|+||.||+|++.  |+.||||+.........+.+.+|+.+|++++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~  100 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ  100 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence            345688888888887532           347999999999999985  8899999987766667788999999999999


Q ss_pred             CCCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCC
Q 016850          146 HSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENA  208 (381)
Q Consensus       146 h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~  208 (381)
                      |||||++++++...+..++||||+++|+|.+++... ......+..++                 +||+|+||+++.+  
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~--  177 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD--  177 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT--
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC--
Confidence            999999999999999999999999999999999764 34433333222                 3566999999876  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCccc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG  288 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~  288 (381)
                        +.+||+|||++..+...    ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....     
T Consensus       178 --~~~kl~Dfg~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-----  246 (321)
T 2c30_A          178 --GRVKLSDFGFCAQISKD----VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-----  246 (321)
T ss_dssp             --CCEEECCCTTCEECCSS----SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----
T ss_pred             --CcEEEeeeeeeeecccC----ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence              56999999999875331    1223456799999999999988999999999999999999999999963211     


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         .....   .....        ..+.  ...+..+++.+.+|+.+||+.||++|||+.++++
T Consensus       247 ---~~~~~---~~~~~--------~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          247 ---VQAMK---RLRDS--------PPPK--LKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             ---HHHHH---HHHHS--------SCCC--CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---HHHHH---HHhcC--------CCCC--cCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               01111   11100        0001  1112345678999999999999999999999976

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.5e-39  Score=307.62  Aligned_cols=239  Identities=19%  Similarity=0.284  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC-----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.     +..||||+...... ...+.+.+|+.+|++++|||||++++++.+.+..++||||+
T Consensus        49 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  128 (373)
T 2qol_A           49 IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYM  128 (373)
T ss_dssp             CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCC
Confidence            3567899999999999874     56799998755432 24567999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..+                 |++|+|+|||++.+    +.+||+|||+++....... .
T Consensus       129 ~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~~~~-~  203 (373)
T 2qol_A          129 ENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN----LVCKVSDFGLGRVLEDDPE-A  203 (373)
T ss_dssp             TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----CCEEECCC-------------
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCC----CCEEECcCccccccccCCc-c
Confidence            9999999998754 3443333222                 23567999999876    5699999999987543111 1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+++.|+|||++.+..++.++|||||||++|||++ |+.||......        ..               .
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--------~~---------------~  260 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--------DV---------------I  260 (373)
T ss_dssp             ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--------HH---------------H
T ss_pred             ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HH---------------H
Confidence            111223346789999999998899999999999999999998 99999632210        11               1


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ..+........+..++..+.+|+.+||+.||.+||++.+|++.|+.++....
T Consensus       261 ~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~  312 (373)
T 2qol_A          261 KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG  312 (373)
T ss_dssp             HHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred             HHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence            1111222223344566789999999999999999999999999999977543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.1e-39  Score=303.06  Aligned_cols=232  Identities=18%  Similarity=0.212  Sum_probs=178.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......      ..+.+.+|+.+|++++|||||++++++.+.+.+++|||
T Consensus        16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e   95 (361)
T 2yab_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE   95 (361)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence            3577999999999999985  789999987654322      36789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+++|+|.+++......++..+..++.                 ||+|+|||+++.+.....+||+|||+++.+..    
T Consensus        96 ~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~----  171 (361)
T 2yab_A           96 LVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED----  171 (361)
T ss_dssp             CCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCT----
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCC----
Confidence            999999999998876666554443332                 45699999987643223699999999987532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.....           .+......... ..  
T Consensus       172 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-----------~~~~~~i~~~~-~~--  236 (361)
T 2yab_A          172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----------QETLANITAVS-YD--  236 (361)
T ss_dssp             -TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----------HHHHHHHHTTC-CC--
T ss_pred             -CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhcC-CC--
Confidence             1223456799999999999988999999999999999999999999964221           11111111100 00  


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .....+..+++.+.+||.+||..||.+|||+.|+++
T Consensus       237 ------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          237 ------FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             ------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                  000011234678999999999999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=3.9e-40  Score=312.32  Aligned_cols=236  Identities=18%  Similarity=0.294  Sum_probs=178.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|++.  ++.||+|........ ..+.+.+|+++|++++|||||++++++.+.+.+++|||||++|
T Consensus       118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g  197 (377)
T 3cbl_A          118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG  197 (377)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence            3567999999999999995  788999986543222 3456889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..+                 |+||+|+|||++.+    +.+||+|||+++.....  .....
T Consensus       198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~----~~~kl~DfG~s~~~~~~--~~~~~  271 (377)
T 3cbl_A          198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK----NVLKISDFGMSREEADG--VYAAS  271 (377)
T ss_dssp             BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCGGGCEECTTS--EEECC
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCC----CcEEECcCCCceecCCC--ceeec
Confidence            9999997643 2443333322                 23566999999876    56999999999864221  11111


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+++.|+|||++.++.++.++|||||||++|||++ |..||......        .               ....+
T Consensus       272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--------~---------------~~~~~  328 (377)
T 3cbl_A          272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--------Q---------------TREFV  328 (377)
T ss_dssp             SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--------H---------------HHHHH
T ss_pred             CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------H---------------HHHHH
Confidence            112335778999999998899999999999999999998 99998643210        0               11111


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ........+..+++.+.+||.+||+.||++|||+.+|++.|+++..+
T Consensus       329 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            22222334445677899999999999999999999999999998654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=8.2e-40  Score=295.70  Aligned_cols=233  Identities=21%  Similarity=0.325  Sum_probs=169.6

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccc----cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL----DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|.+.++.||+|+.......    ..+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   90 (271)
T 3dtc_A           11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG   90 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred             eeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence            3567999999999999999999999987554322    357789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHH--------------------HHHHhhhcceeecccCC----CccceEEcccccccccccC
Q 016850          172 ANLADCLRNPRNPSFTVLST--------------------WLSRMQSSSIIVSEENA----GSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~--------------------~~~~l~~~Nill~~~~~----~~~~~kl~DFG~a~~~~~~  227 (381)
                      |+|.+++... ..+...+..                    +|++|+|+||+++....    .+..+||+|||+++.... 
T Consensus        91 ~~L~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-  168 (271)
T 3dtc_A           91 GPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-  168 (271)
T ss_dssp             EEHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred             CCHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccc-
Confidence            9999999754 344333222                    24466799999986321    236799999999976432 


Q ss_pred             CCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                           .......||+.|+|||++.+..++.++||||||+++|+|++|+.||.....           ......       
T Consensus       169 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~-------  225 (271)
T 3dtc_A          169 -----TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-----------LAVAYG-------  225 (271)
T ss_dssp             ------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH-----------HHHHHH-------
T ss_pred             -----ccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHh-------
Confidence                 112345799999999999988899999999999999999999999964221           010011       


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                          ..........+..+++.+.+++.+||+.||.+|||+.|+++.|+++
T Consensus       226 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          226 ----VAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             ----HHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ----hhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence                1111222333445677899999999999999999999999999754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.1e-39  Score=299.34  Aligned_cols=241  Identities=17%  Similarity=0.212  Sum_probs=171.9

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhh--cCCCCcceEEEEEEe----CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICR--SHHSSLIKLLGACVS----GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~----~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.++.||||++...   ....+.+|.+++..  ++||||+++++++.+    ...+++||||+
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~   88 (301)
T 3q4u_A           12 LLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH   88 (301)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred             EEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence            4578999999999999999999999987543   34566777777776  799999999998764    35689999999


Q ss_pred             CCCCHHHHhcCCCCCCccchH-------------------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          170 SGANLADCLRNPRNPSFTVLS-------------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~-------------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      ++|+|.++++... .+...+.                         .+|+||+|+|||++.+    +.+||+|||+++..
T Consensus        89 ~~g~L~~~l~~~~-~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A           89 EMGSLYDYLQLTT-LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN----GQCCIADLGLAVMH  163 (301)
T ss_dssp             TTCBHHHHHTTCC-BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTT----SCEEECCCTTCEEE
T ss_pred             cCCCHHHHHhhcc-cCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCC----CCEEEeeCCCeeec
Confidence            9999999997543 3322211                         1233567888888876    56999999999875


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCC------CCCcchhHHHHHHHHHHHHhC----------CccccccccCCccc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASG------VVTQKCDVYAFGVVVLELLSG----------EEVLKFVFDEGIDG  288 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDIwSlGvil~elltg----------~~pf~~~~~~~~~~  288 (381)
                      ...............||+.|+|||++.+.      .++.++|||||||++|||++|          +.||........  
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~--  241 (301)
T 3q4u_A          164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP--  241 (301)
T ss_dssp             ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--
T ss_pred             ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc--
Confidence            43222222223445899999999999876      456799999999999999999          666653222111  


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhccccc-CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLK-DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                           .............      ..+... ...+..+++.+.+|+.+||+.||.+|||+.+|++.|+++
T Consensus       242 -----~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          242 -----SFEDMRKVVCVDQ------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             -----CHHHHHHHHTTSC------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             -----chhhhhHHHhccC------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                 0111111110000      000000 011235788999999999999999999999999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-39  Score=304.33  Aligned_cols=238  Identities=22%  Similarity=0.333  Sum_probs=178.6

Q ss_pred             cccccccCCCceEEEEEE-------CCceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTI-------RGKDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-------~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|.+       .+..||+|+...... ...+.+.+|+.+|+++ +||||+++++++.+.+..++||
T Consensus        49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  128 (344)
T 1rjb_A           49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF  128 (344)
T ss_dssp             EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence            356799999999999997       245789998764432 2457899999999999 8999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCC-----------------------CCccchHHH-----------------HHHhhhcceeeccc
Q 016850          167 EHVSGANLADCLRNPRN-----------------------PSFTVLSTW-----------------LSRMQSSSIIVSEE  206 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~-----------------------~~~~~~~~~-----------------~~~l~~~Nill~~~  206 (381)
                      ||+++|+|.+++.....                       ..+..+..+                 |++|+|+||+++.+
T Consensus       129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~  208 (344)
T 1rjb_A          129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG  208 (344)
T ss_dssp             ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT
T ss_pred             ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC
Confidence            99999999999987542                       222222222                 23567999999876


Q ss_pred             CCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCC
Q 016850          207 NAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEG  285 (381)
Q Consensus       207 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~  285 (381)
                          +.+||+|||++..+...  ..........||+.|+|||++.+..++.++|||||||++|||++ |..||...... 
T Consensus       209 ----~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-  281 (344)
T 1rjb_A          209 ----KVVKICDFGLARDIMSD--SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-  281 (344)
T ss_dssp             ----TEEEECCCGGGSCGGGC--TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred             ----CcEEeCCCccCcccccC--ccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH-
Confidence                56999999999875331  11122344567889999999988899999999999999999998 99999643221 


Q ss_pred             cccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                                ..           +...+........+..+++.+.+|+.+||+.||.+||++.++++.|+.++.+.
T Consensus       282 ----------~~-----------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  336 (344)
T 1rjb_A          282 ----------AN-----------FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA  336 (344)
T ss_dssp             ----------HH-----------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             ----------HH-----------HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence                      00           11111222223334456778999999999999999999999999999987654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.7e-40  Score=309.11  Aligned_cols=241  Identities=17%  Similarity=0.227  Sum_probs=180.3

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.       +..||||++.... .....++.+|+.+|++++|||||++++++.+.+..++|||
T Consensus        75 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e  154 (367)
T 3l9p_A           75 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLE  154 (367)
T ss_dssp             EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEE
Confidence            3577999999999999953       4579999875432 2245678899999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC-------CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccc
Q 016850          168 HVSGANLADCLRNPR-------NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~-------~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ||++|+|.+++....       ......+..+                 |+||+|+|||++.++. +..+||+|||+++.
T Consensus       155 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-~~~~kL~DFG~a~~  233 (367)
T 3l9p_A          155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGP-GRVAKIGDFGMARD  233 (367)
T ss_dssp             CCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSST-TCCEEECCCHHHHH
T ss_pred             eCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCC-CceEEECCCccccc
Confidence            999999999997643       2332222222                 2356799999985421 24699999999986


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHH
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      +...  ..........||+.|+|||++.+..++.++|||||||++|||++ |..||.....           .+.     
T Consensus       234 ~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-----------~~~-----  295 (367)
T 3l9p_A          234 IYRA--GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----------QEV-----  295 (367)
T ss_dssp             HHHH--SSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----------HHH-----
T ss_pred             cccc--cccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----------HHH-----
Confidence            4321  11122334668999999999988899999999999999999998 9999964321           111     


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                             ...+........+..+++.+.+|+.+||+.||.+||++.+|++.|+.+.....
T Consensus       296 -------~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          296 -------LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             -------HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             -------HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence                   11111111222344566789999999999999999999999999998866543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.9e-39  Score=299.67  Aligned_cols=250  Identities=18%  Similarity=0.278  Sum_probs=179.4

Q ss_pred             ccccccCCCceEEEEEECC------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIRG------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+..      ..||+|+....... ....+.+|++++++++|||||++++++.+.+..++||||+
T Consensus        49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  128 (333)
T 1mqb_A           49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM  128 (333)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence            3679999999999998752      24888887544322 4567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++... .......+..++                 ++|+|+||+++.+    +.+||+|||+++....... .
T Consensus       129 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~----~~~kl~Dfg~~~~~~~~~~-~  203 (333)
T 1mqb_A          129 ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN----LVCKVSDFGLSRVLEDDPE-A  203 (333)
T ss_dssp             TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----CCEEECCCCC-----------
T ss_pred             CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCC----CcEEECCCCcchhhccccc-c
Confidence            999999999764 334443333222                 2566999999876    5699999999987543111 1


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......        ...    ..         
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~----~~---------  262 (333)
T 1mqb_A          204 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--------EVM----KA---------  262 (333)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHH----HH---------
T ss_pred             ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--------HHH----HH---------
Confidence            112233456889999999998899999999999999999999 99999532210        111    11         


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCcce
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDF  374 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~  374 (381)
                        +........+..+++.+.+|+.+||+.||.+||++.++++.|++++..........++.+..
T Consensus       263 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~~~~~~~p~~  324 (333)
T 1mqb_A          263 --INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRV  324 (333)
T ss_dssp             --HHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGGSBCCC----
T ss_pred             --HHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhhhcCCCccc
Confidence              11111222334566789999999999999999999999999999988776666655555433

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.2e-39  Score=289.77  Aligned_cols=233  Identities=18%  Similarity=0.273  Sum_probs=180.5

Q ss_pred             ccccccCCCceEEEEEE-CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTI-RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~-~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+ .++.||+|+.... ....+++.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   93 (269)
T 4hcu_A           15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS   93 (269)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred             eheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence            56799999999999998 4778888887543 335678999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ......+..++                 ++|+|+||+++.+    ..+||+|||+++....   ........
T Consensus        94 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~----~~~kl~Dfg~~~~~~~---~~~~~~~~  166 (269)
T 4hcu_A           94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN----QVIKVSDFGMTRFVLD---DQYTSSTG  166 (269)
T ss_dssp             HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG----GCEEECCTTGGGGBCC---HHHHSTTS
T ss_pred             HHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCC----CCEEeccccccccccc---cccccccC
Confidence            9997654 34443333222                 2566999999876    5699999999986432   12222344


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..||+.|+|||++.+..++.++||||||+++|+|++ |+.||.....           .+....            +...
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-----------~~~~~~------------~~~~  223 (269)
T 4hcu_A          167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----------SEVVED------------ISTG  223 (269)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHH------------HHTT
T ss_pred             cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-----------HHHHHH------------HhcC
Confidence            567889999999998899999999999999999999 9999864221           011111            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .....+...++.+.+++.+||+.||.+||++.++++.|+++..+
T Consensus       224 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          224 FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            12223344567899999999999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.7e-39  Score=297.57  Aligned_cols=236  Identities=24%  Similarity=0.306  Sum_probs=180.2

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.       +..||+|+...... ...+.+.+|+++|++++|||||++++++.+.+..++|||
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  106 (314)
T 2ivs_A           27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVE  106 (314)
T ss_dssp             EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEe
Confidence            3567999999999999872       36788888754332 245778999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC------------------------CCccchHHH-------H----------HHhhhcceeeccc
Q 016850          168 HVSGANLADCLRNPRN------------------------PSFTVLSTW-------L----------SRMQSSSIIVSEE  206 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~------------------------~~~~~~~~~-------~----------~~l~~~Nill~~~  206 (381)
                      |+++|+|.+++.....                        .....+..+       +          ++|+|+||+++.+
T Consensus       107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~  186 (314)
T 2ivs_A          107 YAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG  186 (314)
T ss_dssp             CCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT
T ss_pred             ecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC
Confidence            9999999999986443                        222222222       2          2556889998876


Q ss_pred             CCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCC
Q 016850          207 NAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEG  285 (381)
Q Consensus       207 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~  285 (381)
                          +.+||+|||+++.....  ..........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... 
T Consensus       187 ----~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-  259 (314)
T 2ivs_A          187 ----RKMKISDFGLSRDVYEE--DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-  259 (314)
T ss_dssp             ----TEEEECCCTTCEECTTT--SCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-
T ss_pred             ----CCEEEcccccccccccc--ccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence                56999999999875321  11122334567899999999988889999999999999999999 99999643221 


Q ss_pred             cccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                             .               +...+........+..+++.+.+|+.+||+.||.+||++.++++.|++++.+
T Consensus       260 -------~---------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          260 -------R---------------LFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             -------G---------------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -------H---------------HHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence                   1               1111111122233445677899999999999999999999999999999765

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.2e-39  Score=322.25  Aligned_cols=234  Identities=20%  Similarity=0.280  Sum_probs=176.1

Q ss_pred             ccccCCCceEEEEEEC----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .||+|+||.||+|.+.    +..||||+++.... ...+.+.+|+++|++++|||||++++++.+ +.++||||||++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            6899999999999873    45688988765432 357889999999999999999999999876 56899999999999


Q ss_pred             HHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.++|.... ......+..+                 |+||+|+|||++.+    +.+||+|||+++.+.... ......
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~----~~vkL~DFGla~~~~~~~-~~~~~~  496 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNR----HYAKISDFGLSKALGADD-SYYTAR  496 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----TEEEECCCSTTTTCC----------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCC----CcEEEeeccCcccccCCC-ceeeec
Confidence            999997643 3443333322                 23567999999876    569999999998753211 111122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......        .+               ...+.
T Consensus       497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~~---------------~~~i~  553 (613)
T 2ozo_A          497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EV---------------MAFIE  553 (613)
T ss_dssp             -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--------HH---------------HHHHH
T ss_pred             cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--------HH---------------HHHHH
Confidence            33456789999999998899999999999999999998 99999743221        11               11122


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      .......+..+++.+.+||.+||+.||++||++.+|++.|+.++...
T Consensus       554 ~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          554 QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            22233445567789999999999999999999999999999998764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=5.2e-39  Score=300.78  Aligned_cols=249  Identities=15%  Similarity=0.215  Sum_probs=186.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......   ..+.+.+|+.+|.++ +|||||++++++.+.+.+|+||||+
T Consensus        13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~   92 (345)
T 3a8x_A           13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV   92 (345)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCC
Confidence            3567999999999999986  788999987654322   356688999999988 8999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.+++......+...+..++                 ++|+|+|||++.+    +.+||+|||+++....    ..
T Consensus        93 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----g~~kL~DFG~a~~~~~----~~  164 (345)
T 3a8x_A           93 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE----GHIKLTDYGMCKEGLR----PG  164 (345)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCGGGCBCSCC----TT
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC----CCEEEEeccccccccC----CC
Confidence            999999999876666655443332                 3567999999876    5699999999975321    12


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..........   ..........+          
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~---~~~~~~~~~~i----------  231 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---QNTEDYLFQVI----------  231 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------CHHHHHHHH----------
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccc---cccHHHHHHHH----------
Confidence            23456789999999999999999999999999999999999999996432211100   00011111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH---HHHHHHHHHHHHhhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR---QVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~---evl~~L~~~~~~~~~~~~~  367 (381)
                      ...  ...+|..++..+.+||.+||+.||.+||++.   .+.+.+++-+....+|...
T Consensus       232 ~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~  287 (345)
T 3a8x_A          232 LEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM  287 (345)
T ss_dssp             HHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHH
T ss_pred             HcC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHH
Confidence            111  1223445678899999999999999999973   4556667777777777755

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=3.8e-39  Score=295.13  Aligned_cols=246  Identities=18%  Similarity=0.209  Sum_probs=178.1

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|++      .++.||+|+.........+.+.+|+++|++++|||||++++++..  ...+++||||
T Consensus        15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~   94 (295)
T 3ugc_A           15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY   94 (295)
T ss_dssp             EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred             hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence            56799999999999985      378899998766555566789999999999999999999999865  4568999999


Q ss_pred             cCCCCHHHHhcCCCC-CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPRN-PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~-~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++..... .....+..+                 |+||+|+||+++.+    +.+||+|||+++...... .
T Consensus        95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~----~~~kl~Dfg~~~~~~~~~-~  169 (295)
T 3ugc_A           95 LPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDK-E  169 (295)
T ss_dssp             CTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----TEEEECCCCSCC--------
T ss_pred             CCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCC----CeEEEccCcccccccCCc-c
Confidence            999999999976542 443333222                 23566999999877    569999999998753211 1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCC-----cccccchhHHHHHHHHHcCC
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG-----IDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  305 (381)
                      .........|+..|+|||++.+..++.++||||||+++|||++|..||.......     ..... .....         
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~---------  239 (295)
T 3ugc_A          170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQG-QMIVF---------  239 (295)
T ss_dssp             ------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCT-HHHHH---------
T ss_pred             eeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCcccc-chhHH---------
Confidence            1122334567888999999998899999999999999999999999885321100     00000 00000         


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                        .+...+........+..+++.+.+|+.+||+.||.+|||+.|+++.|+++..
T Consensus       240 --~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          240 --HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  291 (295)
T ss_dssp             --HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence              0111122222333455677889999999999999999999999999999865

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.4e-39  Score=325.62  Aligned_cols=236  Identities=19%  Similarity=0.230  Sum_probs=178.8

Q ss_pred             cccccCCCceEEEEEEC----CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR----GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      +.||+|+||.||+|.+.    ++.||||+++....  ...+++.+|+++|++|+|||||++++++.+ +..+||||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            46999999999999762    46799998765433  246889999999999999999999999865 458899999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.++|..........+..++                 +||+|+|||++.+    +.+||+|||+++.+.... .....
T Consensus       454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~----~~~kL~DFGla~~~~~~~-~~~~~  528 (635)
T 4fl3_A          454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ----HYAKISDFGLSKALRADE-NYYKA  528 (635)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----TEEEECCTTHHHHTTC--------
T ss_pred             CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC----CCEEEEEcCCccccccCc-ccccc
Confidence            9999999877666655443332                 3567999999876    569999999998764311 11122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....||+.|+|||++.+..++.++|||||||++|||++ |+.||......        .               +...+
T Consensus       529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--------~---------------~~~~i  585 (635)
T 4fl3_A          529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------E---------------VTAML  585 (635)
T ss_dssp             ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------H---------------HHHHH
T ss_pred             ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------H---------------HHHHH
Confidence            334567899999999998899999999999999999998 99999643220        1               11112


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ........+..+++.+.+||.+||+.||++||++.+|++.|++++.+-.
T Consensus       586 ~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l~  634 (635)
T 4fl3_A          586 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  634 (635)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhc
Confidence            2222333455677889999999999999999999999999999987643

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.9e-39  Score=299.95  Aligned_cols=230  Identities=20%  Similarity=0.278  Sum_probs=174.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++...... ..+.+.+|+.+++.++|||||++++++.+.+..|+|||||++|
T Consensus        11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~   90 (323)
T 3tki_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   90 (323)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCC
Confidence            4567999999999999985  788999987554433 3467899999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++......+...+..++.                 ||+|+|||++.+    ..+||+|||+++.+..  .......
T Consensus        91 ~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~--~~~~~~~  164 (323)
T 3tki_A           91 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER----DNLKISDFGLATVFRY--NNRERLL  164 (323)
T ss_dssp             EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCTTCEECEE--TTEECCB
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCC----CCEEEEEeeccceecc--CCccccc
Confidence            9999998876666555444332                 556999999876    5599999999986532  1222234


Q ss_pred             cccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........      ...               .+..
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~---------------~~~~  223 (323)
T 3tki_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ------EYS---------------DWKE  223 (323)
T ss_dssp             CSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH------HHH---------------HHHT
T ss_pred             CCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH------HHH---------------HHhc
Confidence            46789999999999987765 7899999999999999999999964322110      000               0111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            11111112345678899999999999999999999965

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=5.1e-39  Score=310.15  Aligned_cols=232  Identities=17%  Similarity=0.203  Sum_probs=176.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|...  ++.+|+|++......  ..+.+.+|+++|++|+|||||++++++.+.+..|+|||||++
T Consensus        15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g   94 (444)
T 3soa_A           15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG   94 (444)
T ss_dssp             EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred             EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence            4678999999999999884  788999987654432  456789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++.......+..+..++                 +||+|+|||++... .+..+||+|||+++....    ....
T Consensus        95 g~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~-~~~~vkL~DFG~a~~~~~----~~~~  169 (444)
T 3soa_A           95 GELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL-KGAAVKLADFGLAIEVEG----EQQA  169 (444)
T ss_dssp             CBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS-TTCCEEECCCSSCBCCCT----TCCB
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC-CCCcEEEccCceeEEecC----CCce
Confidence            9999999887766655444333                 25669999998531 125699999999976532    2222


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|.+||.....        ......   ...+.         
T Consensus       170 ~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~---i~~~~---------  229 (444)
T 3soa_A          170 WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQ---IKAGA---------  229 (444)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHH---HHHTC---------
T ss_pred             eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHH---HHhCC---------
Confidence            3457899999999999988999999999999999999999999963221        011111   11100         


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+||.+||+.||.+|||+.|+++
T Consensus       230 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          230 YDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            01111112345778999999999999999999999976

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.5e-39  Score=297.99  Aligned_cols=232  Identities=19%  Similarity=0.229  Sum_probs=177.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......      ..+.+.+|+.+|++++|||||++++++.+.+.+++|||
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   94 (326)
T 2y0a_A           15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE   94 (326)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence            4578999999999999985  789999987654321      46789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+++|+|.+++......+...+..++.                 +|+|+||+++.++.....+||+|||+++.+..    
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~----  170 (326)
T 2y0a_A           95 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----  170 (326)
T ss_dssp             CCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT----
T ss_pred             cCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC----
Confidence            999999999998776666554443332                 45699999987653334799999999987532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       ........||+.|+|||++.+..++.++|||||||++|+|++|+.||......        ....   ......     
T Consensus       171 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~---~~~~~~-----  233 (326)
T 2y0a_A          171 -GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLA---NVSAVN-----  233 (326)
T ss_dssp             -TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHH---HHHHTC-----
T ss_pred             -CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHH---HHHhcC-----
Confidence             11234567999999999999889999999999999999999999999632110        1111   111000     


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          ..........+++.+.+||.+||+.||.+|||+.|+++
T Consensus       234 ----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          234 ----YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             ----CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                00000001134567999999999999999999999975

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.5e-39  Score=316.17  Aligned_cols=233  Identities=22%  Similarity=0.320  Sum_probs=181.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|.+.  +..||||.+... ....+.+.+|+.+|++|+|||||++++++.+.+.++||||||++|+|
T Consensus       225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L  303 (495)
T 1opk_A          225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL  303 (495)
T ss_dssp             EEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             eeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence            467999999999999996  678999986543 33578899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .++|....  ......+..+                 |+||+|+|||++.+    +.+||+|||+++....   ......
T Consensus       304 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFG~a~~~~~---~~~~~~  376 (495)
T 1opk_A          304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN----HLVKVADFGLSRLMTG---DTYTAH  376 (495)
T ss_dssp             HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG----GCEEECCTTCEECCTT---CCEECC
T ss_pred             HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCC----CcEEEeecccceeccC---Cceeec
Confidence            99997543  2333322222                 23566899999876    5699999999987532   122223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+++.|+|||++.+..++.++|||||||++|||++ |+.||......        .               +.+.+.
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--------~---------------~~~~~~  433 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------Q---------------VYELLE  433 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------G---------------HHHHHH
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--------H---------------HHHHHH
Confidence            34557889999999998899999999999999999999 99999643211        1               111122


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .......+..+++.+.+||.+||+.||.+|||+.+|++.|+.++.+
T Consensus       434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            2233344556678899999999999999999999999999987543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-39  Score=301.48  Aligned_cols=236  Identities=18%  Similarity=0.218  Sum_probs=178.3

Q ss_pred             cccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.+       +.||+|+....... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  130 (343)
T 1luf_A           51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE  130 (343)
T ss_dssp             EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence            45679999999999999864       78899987544332 35679999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC------------------------CCCccchHHH-----------------HHHhhhcceeeccc
Q 016850          168 HVSGANLADCLRNPR------------------------NPSFTVLSTW-----------------LSRMQSSSIIVSEE  206 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~------------------------~~~~~~~~~~-----------------~~~l~~~Nill~~~  206 (381)
                      |+++|+|.++|....                        ......+..+                 |+||+|+||+++.+
T Consensus       131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~  210 (343)
T 1luf_A          131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN  210 (343)
T ss_dssp             CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC
Confidence            999999999997642                        2332322222                 23566999999876


Q ss_pred             CCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCC
Q 016850          207 NAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEG  285 (381)
Q Consensus       207 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~  285 (381)
                          +.+||+|||+++.+...  ..........||+.|+|||++.+..++.++|||||||++|||++ |..||.....  
T Consensus       211 ----~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--  282 (343)
T 1luf_A          211 ----MVVKIADFGLSRNIYSA--DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH--  282 (343)
T ss_dssp             ----GCEEECCCSCHHHHTGG--GCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--
T ss_pred             ----CeEEEeecCCCcccccC--ccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh--
Confidence                56999999999865321  11122345668999999999988899999999999999999999 9999863211  


Q ss_pred             cccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                               .+......            .......+..+++.+.+|+.+||+.||.+||++.++++.|+++..+
T Consensus       283 ---------~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          283 ---------EEVIYYVR------------DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             ---------HHHHHHHH------------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             ---------HHHHHHHh------------CCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence                     11111111            1111223445667899999999999999999999999999988653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=305.52  Aligned_cols=241  Identities=16%  Similarity=0.223  Sum_probs=181.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+||+|++.  ++.||+|++...   .....+.+.+|+.+|..+ +|||||++++++.+.+.+|||||||
T Consensus        27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~  106 (353)
T 3txo_A           27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFV  106 (353)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCC
Confidence            3577999999999999985  788999987543   223567788999999998 7999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.+++.......+..+..++                 +||||+|||++.+    +.+||+|||+++...    ...
T Consensus       107 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~----g~ikL~DFG~a~~~~----~~~  178 (353)
T 3txo_A          107 NGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE----GHCKLADFGMCKEGI----CNG  178 (353)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCSC----C--
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCC----CCEEEccccceeecc----cCC
Confidence            999999999877666655444332                 3567999999887    569999999997532    122


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......          
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----------~~~~~~i~----------  237 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----------DDLFEAIL----------  237 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH----------
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----------HHHHHHHH----------
Confidence            234567899999999999988899999999999999999999999964321           11111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH---HHHHHHHHHHHhhhhhhhc
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ---VTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e---vl~~L~~~~~~~~~~~~~~  368 (381)
                       ..  ...++..+++.+.+||.+||+.||.+||++.+   +-+.+++-+.+..+|..+.
T Consensus       238 -~~--~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~  293 (353)
T 3txo_A          238 -ND--EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLN  293 (353)
T ss_dssp             -HC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHH
T ss_pred             -cC--CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHh
Confidence             11  12234456778999999999999999999822   2444666677777787653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=9.3e-39  Score=290.71  Aligned_cols=233  Identities=20%  Similarity=0.288  Sum_probs=177.3

Q ss_pred             ccccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+.+ ..||+|++... ....+++.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus        29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  107 (283)
T 3gen_A           29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL  107 (283)
T ss_dssp             EEECC---CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred             HhhcCCCCCceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence            5779999999999999974 57888887543 335678999999999999999999999999999999999999999999


Q ss_pred             HHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.. ........+..++                 ++|+|+||+++.+    +.+||+|||+++....   ........
T Consensus       108 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~----~~~kl~Dfg~~~~~~~---~~~~~~~~  180 (283)
T 3gen_A          108 NYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ----GVVKVSDFGLSRYVLD---DEYTSSVG  180 (283)
T ss_dssp             HHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT----SCEEECSTTGGGGBCC---HHHHSTTS
T ss_pred             HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCC----CCEEEccccccccccc---cccccccC
Confidence            99987 3344444333332                 2566999999876    5699999999986432   11222334


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.....           ......            +...
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----------~~~~~~------------~~~~  237 (283)
T 3gen_A          181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----------SETAEH------------IAQG  237 (283)
T ss_dssp             TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----------HHHHHH------------HHTT
T ss_pred             CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----------hHHHHH------------Hhcc
Confidence            557889999999998899999999999999999998 9999964221           011111            1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .....+...++.+.+|+.+||+.||.+|||+.++++.|++++.+
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          238 LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            12222334467899999999999999999999999999999875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.2e-40  Score=316.09  Aligned_cols=254  Identities=15%  Similarity=0.198  Sum_probs=185.1

Q ss_pred             HHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC
Q 016850           87 EICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGN  160 (381)
Q Consensus        87 ~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~  160 (381)
                      ++....++| ..+.||+|+||+||+|++.  ++.||+|++.....   ...+.+.+|+.+|..++|||||+++++|.+.+
T Consensus        68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  147 (437)
T 4aw2_A           68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN  147 (437)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence            333344556 4567899999999999996  67889998754221   12344889999999999999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccccccc
Q 016850          161 CGYLVYEHVSGANLADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      .+|||||||++|+|.++|.. ...+++..+..++                 +||||+|||++.+    +.+||+|||+++
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~----g~vkL~DFGla~  223 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMN----GHIRLADFGSCL  223 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCC----CCEEEcchhhhh
Confidence            99999999999999999987 3455544443332                 3567999999887    569999999997


Q ss_pred             ccccCCCCccccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          223 LCGEVSGNESGKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       223 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      .+..   .........+||+.|+|||++.     ...++.++|||||||++|||++|+.||.....           .+.
T Consensus       224 ~~~~---~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~-----------~~~  289 (437)
T 4aw2_A          224 KLME---DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----------VET  289 (437)
T ss_dssp             ECCT---TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHH
T ss_pred             hccc---CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh-----------hHH
Confidence            6532   2222234568999999999987     56789999999999999999999999964221           111


Q ss_pred             HHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHHHHHHHHhhhhhhhcC
Q 016850          298 ASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                      .......       ...... +.....+++.+.+||.+||..+|++  ||++.|++   ++-+.+..+|+.+..
T Consensus       290 ~~~i~~~-------~~~~~~-p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil---~Hpff~~i~w~~l~~  352 (437)
T 4aw2_A          290 YGKIMNH-------KERFQF-PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFK---KHPFFSGIDWDNIRN  352 (437)
T ss_dssp             HHHHHTH-------HHHCCC-CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHH---TSGGGTTCCTTTGGG
T ss_pred             HHhhhhc-------cccccC-CcccccCCHHHHHHHHHHhcccccccCCCCHHHHh---CCCccCCCCHHHHhh
Confidence            1111100       000000 1111235778999999999988888  99988874   466666778876643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.2e-39  Score=295.66  Aligned_cols=249  Identities=18%  Similarity=0.294  Sum_probs=182.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  +..||+|+.......   ..+.+.+|+.++++++|||||++++++.+.+.+++||||++
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   94 (294)
T 4eqm_A           15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE   94 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCC
Confidence            3567999999999999985  789999987554332   35678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++......+...+..++                 +||+|+||+++.+    +.+||+|||+++.+..   ....
T Consensus        95 g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~---~~~~  167 (294)
T 4eqm_A           95 GPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSN----KTLKIFDFGIAKALSE---TSLT  167 (294)
T ss_dssp             SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEECCCSSSTTC---------
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CCEEEEeCCCcccccc---cccc
Confidence            99999999876666655444333                 2566999999877    5699999999987532   1222


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ...............    
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~~~----  232 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA-----------VSIAIKHIQDSVPNV----  232 (294)
T ss_dssp             -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-----------HHHHHHHHSSCCCCH----
T ss_pred             ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhhccCCCc----
Confidence            23456799999999999998999999999999999999999999964221           111111111111000    


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-ChHHHHHHHHHHHHHhhhhhhhcCC
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-DMRQVTGLVSKMYLESKNWADKIGF  370 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~~~~~~~~~~~  370 (381)
                          ....+..+++.+.+++.+||+.||.+|| ++.++.+.|+.++.+.........+
T Consensus       233 ----~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~  286 (294)
T 4eqm_A          233 ----TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYEL  286 (294)
T ss_dssp             ----HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCCC-
T ss_pred             ----chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchhhh
Confidence                0111223567899999999999999998 8999999999887665554444433

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=6.2e-39  Score=295.93  Aligned_cols=239  Identities=24%  Similarity=0.327  Sum_probs=182.3

Q ss_pred             cccccccCCCceEEEEEE-------CCceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTI-------RGKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-------~~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|++       .++.||+|+....... ..+.+.+|+++|+++ +||||+++++++.+.+..++||
T Consensus        27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~  106 (313)
T 1t46_A           27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVIT  106 (313)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEE
Confidence            356799999999999986       2468999987654332 457899999999999 9999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCC------------------CCccchHHHH-----------------HHhhhcceeecccCCCcc
Q 016850          167 EHVSGANLADCLRNPRN------------------PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~------------------~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~  211 (381)
                      ||+++|+|.+++.....                  .....+..++                 ++|+|+||+++.+    +
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----~  182 (313)
T 1t46_A          107 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG----R  182 (313)
T ss_dssp             ECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT----T
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC----C
Confidence            99999999999976542                  3333332222                 2566999999876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++......  .........||+.|+|||++.+..++.++|||||||++|||++ |+.||.......     
T Consensus       183 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----  255 (313)
T 1t46_A          183 ITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-----  255 (313)
T ss_dssp             EEEECCCGGGSCTTSCT--TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-----
T ss_pred             CEEEccccccccccccc--cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-----
Confidence            69999999998754321  1112234557889999999988899999999999999999999 999996432210     


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                        .               +...+........+..+++.+.+|+.+||+.||.+|||+.++++.|++++.+..
T Consensus       256 --~---------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          256 --K---------------FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             --H---------------HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             --H---------------HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence              0               111111112222334556789999999999999999999999999999988654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=8.5e-39  Score=290.81  Aligned_cols=236  Identities=21%  Similarity=0.292  Sum_probs=168.1

Q ss_pred             cccccccCCCceEEEEEEC-----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|.+.     +..|++|+...... ...+.+.+|+.++++++|||||++++++. ++..++||||+
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~   97 (281)
T 1mp8_A           19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC   97 (281)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecC
Confidence            3567999999999999984     34578887654322 24567899999999999999999999974 56689999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..+                 |++|+|+||+++.+    ..+||+|||+++....   ..
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~---~~  170 (281)
T 1mp8_A           98 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN----DCVKLGDFGLSRYMED---ST  170 (281)
T ss_dssp             TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----TEEEECC--------------
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCC----CCEEECccccccccCc---cc
Confidence            9999999998654 3443333222                 23567999999876    5699999999987532   11


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+|+.|+|||++.+..++.++|||||||++|||++ |..||......        .....             
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--------~~~~~-------------  229 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIGR-------------  229 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHHH-------------
T ss_pred             ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--------HHHHH-------------
Confidence            112334557889999999988899999999999999999997 99999643221        11111             


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                        +........+..+++.+.+++.+||+.||++||++.++++.|++++.+.+
T Consensus       230 --i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  279 (281)
T 1mp8_A          230 --IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  279 (281)
T ss_dssp             --HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             --HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence              11111222344567789999999999999999999999999999988754

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.5e-38  Score=290.00  Aligned_cols=235  Identities=23%  Similarity=0.317  Sum_probs=184.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|.+.  +..||+|+... .....+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   96 (288)
T 3kfa_A           18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL   96 (288)
T ss_dssp             EEESGGGTTCSEEEEEEGGGTEEEEEEEECS-CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred             EeecCCCCceeEEEeEecCCCEEEEEEecCc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence            567999999999999996  77888888753 333567899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCC--CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPRN--PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~~--~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++.....  .....+..+                 |.+|+|+||+++.+    +.+||+|||++.....   ......
T Consensus        97 ~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~----~~~~l~Dfg~~~~~~~---~~~~~~  169 (288)
T 3kfa_A           97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN----HLVKVADFGLSRLMTG---DTYTAH  169 (288)
T ss_dssp             HHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGG----GCEEECCCCGGGTSCS---SSSEEE
T ss_pred             HHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCC----CCEEEccCccceeccC---Cccccc
Confidence            999976433  333332222                 22556999999876    5699999999987532   222233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||......                       .+...+.
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-----------------------~~~~~~~  226 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----------------------QVYELLE  226 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----------------------GHHHHHH
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----------------------HHHHHHh
Confidence            44567889999999998899999999999999999999 99998643211                       1111122


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      .......+..+++.+.+|+.+||+.||.+||++.++++.|+.++.+..
T Consensus       227 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~  274 (288)
T 3kfa_A          227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS  274 (288)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            222333445567889999999999999999999999999999988754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=5.6e-39  Score=298.53  Aligned_cols=237  Identities=20%  Similarity=0.295  Sum_probs=173.7

Q ss_pred             cccccccCCCceEEEEEEC--Cce----EEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKD----VIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~----v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|++.  ++.    |++|...... ....+.+.+|+.++++++|||||++++++.+.. .++||||
T Consensus        19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~   97 (327)
T 3poz_A           19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL   97 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred             cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence            3567999999999999974  333    4666654322 235678999999999999999999999998765 7899999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++.... ......+..++                 +||+|+|||++.+    +.+||+|||+++.+...  .
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~----~~~kl~Dfg~a~~~~~~--~  171 (327)
T 3poz_A           98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAE--E  171 (327)
T ss_dssp             CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET----TEEEECCTTHHHHHTTT--C
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCC----CCEEEccCcceeEccCC--c
Confidence            99999999997643 34444333322                 3567999999886    56999999999876432  1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........||+.|+|||++.+..++.++|||||||++|||++ |+.||......                       .+
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----------------------~~  228 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----------------------EI  228 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----------------------GH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-----------------------HH
Confidence            2222334567889999999999999999999999999999999 99999643221                       11


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ...+........+..++..+.+|+.+||+.||.+||++.++++.|+.+.....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~  281 (327)
T 3poz_A          229 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             HHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHH
T ss_pred             HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhh
Confidence            11122222233344567789999999999999999999999999999876443

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.8e-39  Score=299.16  Aligned_cols=229  Identities=20%  Similarity=0.338  Sum_probs=169.3

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      .+.||+|+||.||+|++.++.||+|+...  ....+.+.+|+++|++++|||||++++++.+  ..++||||+++|+|.+
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~   88 (307)
T 2eva_A           13 EEVVGRGAFGVVCKAKWRAKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYN   88 (307)
T ss_dssp             EEEEECCSSSEEEEEEETTEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHHH
T ss_pred             eeEeecCCCceEEEEEECCeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHHH
Confidence            56799999999999999999999998643  3456789999999999999999999998764  4789999999999999


Q ss_pred             HhcCCCCC---CccchH--------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          177 CLRNPRNP---SFTVLS--------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       177 ~l~~~~~~---~~~~~~--------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ++......   ....+.                    .+|++|+|+||+++.++   ..+||+|||++.....       
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~---~~~kl~Dfg~~~~~~~-------  158 (307)
T 2eva_A           89 VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGG---TVLKICDFGTACDIQT-------  158 (307)
T ss_dssp             HHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTT---TEEEECCCCC-------------
T ss_pred             HHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCC---CEEEEccccccccccc-------
Confidence            99875532   222111                    12335668888887653   3489999999976422       


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||......         .........           
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---------~~~~~~~~~-----------  218 (307)
T 2eva_A          159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP---------AFRIMWAVH-----------  218 (307)
T ss_dssp             ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS---------HHHHHHHHH-----------
T ss_pred             ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc---------HHHHHHHHh-----------
Confidence            123356999999999999889999999999999999999999999643221         001111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                       .......+..+++.+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus       219 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          219 -NGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             -TTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             -cCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence             1112223334567899999999999999999999999999988654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.9e-38  Score=289.33  Aligned_cols=236  Identities=19%  Similarity=0.285  Sum_probs=180.3

Q ss_pred             cccccCCCceEEEEEE----CCceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           98 KKFTSSSASASWRGTI----RGKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~----~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      +.||+|+||.||+|.+    .+..||+|+...... ...+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~   94 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG   94 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence            3799999999999986    366799998765433 2567899999999999999999999998 556689999999999


Q ss_pred             CHHHHhcCCC-CCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ..+...+..++.                 +|+|+||+++.+    +.+||+|||++....... .....
T Consensus        95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~----~~~kl~Dfg~~~~~~~~~-~~~~~  169 (287)
T 1u59_A           95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR----HYAKISDFGLSKALGADD-SYYTA  169 (287)
T ss_dssp             EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET----TEEEECCCTTCEECTTCS-CEECC
T ss_pred             CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCC----CCEEECcccceeeeccCc-ceeec
Confidence            9999997543 344444333322                 456899999876    569999999998753211 11122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....||+.|+|||++.+..++.++||||||+++|||++ |+.||......        ....               .+
T Consensus       170 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~---------------~i  226 (287)
T 1u59_A          170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVMA---------------FI  226 (287)
T ss_dssp             CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHHH---------------HH
T ss_pred             cccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--------HHHH---------------HH
Confidence            234557899999999988889999999999999999998 99999643210        1111               11


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ........+..+++.+.+++.+||+.||.+||++.++++.|+.++.+..
T Consensus       227 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  275 (287)
T 1u59_A          227 EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  275 (287)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             hcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            1111233445667889999999999999999999999999999988765

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.8e-38  Score=299.05  Aligned_cols=231  Identities=18%  Similarity=0.228  Sum_probs=176.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|.+.  +..||+|++......  ..+.+.+|+.+|++|+|||||++++++.+.+..|+|||||++
T Consensus        33 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g  112 (362)
T 2bdw_A           33 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG  112 (362)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence            4678999999999999985  789999987654332  456789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++.......+..+..++                 +||+|+|||++..+ .+..+||+|||++.....     ...
T Consensus       113 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~DfG~a~~~~~-----~~~  186 (362)
T 2bdw_A          113 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA-KGAAVKLADFGLAIEVND-----SEA  186 (362)
T ss_dssp             CBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS-TTCCEEECCCTTCBCCTT-----CCS
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC-CCCCEEEeecCcceEecC-----Ccc
Confidence            9999999887666554443332                 25669999997642 125699999999987532     122


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++|||||||++|+|++|++||.....        .....   ....+.         
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~---~i~~~~---------  246 (362)
T 2bdw_A          187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYA---QIKAGA---------  246 (362)
T ss_dssp             CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH---HHHHTC---------
T ss_pred             cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHH---HHHhCC---------
Confidence            3456799999999999988999999999999999999999999964211        01111   111110         


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+||.+||+.||.+||++.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          247 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             CCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00011112345678999999999999999999999875

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=3.9e-39  Score=298.84  Aligned_cols=236  Identities=17%  Similarity=0.256  Sum_probs=167.2

Q ss_pred             cccccccCCCceEEEEEECCc-----eEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCee------
Q 016850           96 LAKKFTSSSASASWRGTIRGK-----DVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG------  162 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~-----~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~------  162 (381)
                      ..+.||+|+||.||+|++...     .||+|+.....  ....+.+.+|++++++++|||||++++++.+.+..      
T Consensus        27 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~  106 (323)
T 3qup_A           27 LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP  106 (323)
T ss_dssp             EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CE
T ss_pred             EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCcc
Confidence            456799999999999998532     68998875442  23467899999999999999999999999876655      


Q ss_pred             eEEEeccCCCCHHHHhcCCC------CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccc
Q 016850          163 YLVYEHVSGANLADCLRNPR------NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFG  219 (381)
Q Consensus       163 ~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG  219 (381)
                      ++||||+++|+|.+++....      ..+...+..++                 +||+|+||+++.+    +.+||+|||
T Consensus       107 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~----~~~kl~Dfg  182 (323)
T 3qup_A          107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED----MTVCVADFG  182 (323)
T ss_dssp             EEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----SCEEECCCC
T ss_pred             EEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC----CCEEEeecc
Confidence            99999999999999996432      23433333322                 2567999999876    569999999


Q ss_pred             cccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHH
Q 016850          220 TAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKA  298 (381)
Q Consensus       220 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~  298 (381)
                      +++.....  ..........+++.|+|||++.+..++.++|||||||++|||++ |+.||......        ....  
T Consensus       183 ~a~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------~~~~--  250 (323)
T 3qup_A          183 LSRKIYSG--DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--------EIYN--  250 (323)
T ss_dssp             C-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHH--
T ss_pred             cccccccc--ccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--------HHHH--
Confidence            99865321  11122334557889999999998899999999999999999999 99999643221        1111  


Q ss_pred             HHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          299 SEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                                   .+........+..+++.+.+|+.+||+.||.+|||+.++++.|++++..
T Consensus       251 -------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          251 -------------YLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             -------------HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -------------HHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                         1111112223445667899999999999999999999999999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=9.6e-39  Score=302.41  Aligned_cols=239  Identities=18%  Similarity=0.267  Sum_probs=182.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|...  ++.||+|++....   ....+.+.+|+++|+.++|||||++++++.+.+.+|+||||++
T Consensus        19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~   98 (384)
T 4fr4_A           19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL   98 (384)
T ss_dssp             EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence            3567999999999999985  6789999875432   2356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++.....+....+..++                 ++|+|+|||++.+    +.+||+|||+++.+..     ..
T Consensus        99 gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~----g~vkL~DFG~a~~~~~-----~~  169 (384)
T 4fr4_A           99 GGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH----GHVHITDFNIAAMLPR-----ET  169 (384)
T ss_dssp             TEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECCT-----TC
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCC----CCEEEeccceeeeccC-----CC
Confidence            99999999987776655544333                 2566999999877    5699999999987532     22


Q ss_pred             cccccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          234 KVNKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .....+||+.|+|||++.+   ..++.++|||||||++|||++|+.||........     ......    +        
T Consensus       170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~-----~~~~~~----~--------  232 (384)
T 4fr4_A          170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-----KEIVHT----F--------  232 (384)
T ss_dssp             CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH-----HHHHHH----H--------
T ss_pred             ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH-----HHHHHH----H--------
Confidence            3456789999999999864   4589999999999999999999999964322110     011110    0        


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-hHHHHHHHHHHHHHhhhhhhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-MRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~~~~~~~~~~  367 (381)
                         . .....++..+++.+.+||.+||+.||.+||+ +.++   ++.-+....+|+..
T Consensus       233 ---~-~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l---~~hp~f~~~~w~~~  283 (384)
T 4fr4_A          233 ---E-TTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDV---QNFPYMNDINWDAV  283 (384)
T ss_dssp             ---H-HCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHH---HTSGGGTTCCHHHH
T ss_pred             ---h-hcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHH---HcChhhhcCCHHHH
Confidence               0 0112334556788999999999999999998 5554   34455666677665

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.1e-38  Score=299.08  Aligned_cols=240  Identities=17%  Similarity=0.201  Sum_probs=184.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+.....   ....+.+.+|..+|..+ +||||+++++++.+.+.+|+||||+
T Consensus        24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~  103 (353)
T 2i0e_A           24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV  103 (353)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCC
Confidence            3567999999999999996  5779999875432   23567788999999988 8999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.+++.......+..+..++                 +||+|+|||++.+    +.+||+|||+++....    ..
T Consensus       104 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~----g~vkL~DFG~a~~~~~----~~  175 (353)
T 2i0e_A          104 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE----GHIKIADFGMCKENIW----DG  175 (353)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCCCC----TT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCC----CcEEEEeCCccccccc----CC
Confidence            999999999876666554443332                 3567999999887    5699999999975321    12


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......          
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----------~~~~~~i~----------  234 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----------DELFQSIM----------  234 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH----------
T ss_pred             cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----------HHHHHHHH----------
Confidence            234567899999999999999999999999999999999999999964211           11111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHHHHHHHHHHHhhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~~~~~~~~~~~  367 (381)
                       ..  ...++..+++.+.+||.+||+.||.+||++  ..+.+.+++-+.+..+|+.+
T Consensus       235 -~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l  288 (353)
T 2i0e_A          235 -EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL  288 (353)
T ss_dssp             -HC--CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHH
T ss_pred             -hC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHH
Confidence             11  122344567889999999999999999975  23445566666777788765

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=4.8e-39  Score=300.75  Aligned_cols=240  Identities=18%  Similarity=0.256  Sum_probs=183.0

Q ss_pred             cCC-cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEE
Q 016850           93 NNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ++| ..+.||+|+||.||+|++.  ++.||+|++....   ....+.+.+|..+|..+ +|||||++++++.+.+.+|+|
T Consensus        17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv   96 (345)
T 1xjd_A           17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   96 (345)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEE
Confidence            344 4567999999999999985  7889999875432   23567788999999987 999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||++|+|.+++.......+..+..++                 ++|+|+|||++.+    +.+||+|||+++....  
T Consensus        97 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----g~vkL~DFG~a~~~~~--  170 (345)
T 1xjd_A           97 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD----GHIKIADFGMCKENML--  170 (345)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCCCC--
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCC----CCEEEeEChhhhhccc--
Confidence            9999999999999876656554443332                 3566999999877    5699999999975321  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                        ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.....        .....   ....     
T Consensus       171 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--------~~~~~---~i~~-----  232 (345)
T 1xjd_A          171 --GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--------EELFH---SIRM-----  232 (345)
T ss_dssp             --TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH---HHHH-----
T ss_pred             --CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--------HHHHH---HHHh-----
Confidence              12234567899999999999999999999999999999999999999964221        01111   1110     


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-HHHHHHHHHHHHhhhhhhh
Q 016850          309 VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-QVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~~L~~~~~~~~~~~~~  367 (381)
                            .  ...++..+++.+.+||.+||+.||.+||++. +|+   ++-+.+..+|+.+
T Consensus       233 ------~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~---~hp~f~~~~w~~l  281 (345)
T 1xjd_A          233 ------D--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR---QHPLFREINWEEL  281 (345)
T ss_dssp             ------C--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG---GSGGGTTCCHHHH
T ss_pred             ------C--CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH---cCccccCCCHHHH
Confidence                  0  1223445677899999999999999999997 553   3444555566655

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=5.4e-39  Score=289.94  Aligned_cols=234  Identities=21%  Similarity=0.292  Sum_probs=178.4

Q ss_pred             cccccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           96 LAKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ..+.||+|+||.||+|.+.+ ..||+|+.... ....+++.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   90 (268)
T 3sxs_A           12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL   90 (268)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBH
T ss_pred             eeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcH
Confidence            35679999999999999874 57888886543 33567899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ..+...+..++.                 +|+|+||+++.+    +.+||+|||++.....   .......
T Consensus        91 ~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~----~~~~l~Dfg~~~~~~~---~~~~~~~  163 (268)
T 3sxs_A           91 LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD----LCVKVSDFGMTRYVLD---DQYVSSV  163 (268)
T ss_dssp             HHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTT----CCEEECCTTCEEECCT---TCEEECC
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCC----CCEEEccCccceecch---hhhhccc
Confidence            99997643 244443333322                 456999999876    5699999999986532   2222233


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.....           .+.....            ..
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~~------------~~  220 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN-----------SEVVLKV------------SQ  220 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH-----------HHHHHHH------------HT
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh-----------HHHHHHH------------Hc
Confidence            4557788999999988889999999999999999999 9999863221           0111111            11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ......+...++.+.+++.+||+.||.+|||+.++++.|+.+..+
T Consensus       221 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          221 GHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             CCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            111222334567899999999999999999999999999887543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.2e-38  Score=289.95  Aligned_cols=250  Identities=16%  Similarity=0.199  Sum_probs=180.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC--eeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGN--CGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++..... ...+.+.+|+++|++++|||||++++++...+  ..++||||++
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~   92 (319)
T 4euu_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP   92 (319)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred             EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence            3567999999999999996  78999998764432 35678899999999999999999999998755  7899999999


Q ss_pred             CCCHHHHhcCCCC---CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          171 GANLADCLRNPRN---PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~---~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +|+|.+++.....   .+...+..++                 ++|+|+||++......+..+||+|||+++.+..    
T Consensus        93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~----  168 (319)
T 4euu_A           93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED----  168 (319)
T ss_dssp             TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCT----
T ss_pred             CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCC----
Confidence            9999999987543   4444333332                 256699998832222236799999999987532    


Q ss_pred             ccccccccCCCccccchhhhc--------CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          231 ESGKVNKIEGTRGYMAPEFQA--------SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                       ........||+.|+|||++.        +..++.++|||||||++|||++|+.||........       .........
T Consensus       169 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------~~~~~~~~~  240 (319)
T 4euu_A          169 -DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR-------NKEVMYKII  240 (319)
T ss_dssp             -TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG-------CHHHHHHHH
T ss_pred             -CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch-------hHHHHHHHh
Confidence             12234567999999999886        56789999999999999999999999974332111       111111111


Q ss_pred             cCCccch-----------hhhh-cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          303 AGGVGGV-----------RKWV-DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       303 ~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      .+.....           ..+. .-.........+++.+.+|+.+||+.||++|||+.|+++...+.
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            1111000           0000 00111234578889999999999999999999999999877754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.1e-38  Score=287.90  Aligned_cols=228  Identities=20%  Similarity=0.300  Sum_probs=176.5

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|+++++.||+|++......  ..+.+.+|+.++++++|||||++++++.+.  +..++||||+++
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   93 (271)
T 3kmu_A           14 FLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY   93 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred             HHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence            3567999999999999999999999998665432  456799999999999999999999999877  788999999999


Q ss_pred             CCHHHHhcCCCC--CCccchHH-------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          172 ANLADCLRNPRN--PSFTVLST-------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       172 gsL~~~l~~~~~--~~~~~~~~-------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+|.+++.....  .+...+..                   .|++|+|+||+++.+    +.++|+|||++....     
T Consensus        94 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~----~~~~l~~~~~~~~~~-----  164 (271)
T 3kmu_A           94 GSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDED----MTARISMADVKFSFQ-----  164 (271)
T ss_dssp             CBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTT----SCEEEEGGGSCCTTS-----
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCC----cceeEEeccceeeec-----
Confidence            999999987653  34333222                   234567999999876    458888888765421     


Q ss_pred             ccccccccCCCccccchhhhcCCCCCc---chhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQ---KCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                          .....||+.|+|||++.+..++.   ++|||||||++|||++|+.||.....           .+...        
T Consensus       165 ----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~--------  221 (271)
T 3kmu_A          165 ----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-----------MEIGM--------  221 (271)
T ss_dssp             ----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-----------HHHHH--------
T ss_pred             ----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-----------HHHHH--------
Confidence                12356899999999998765544   89999999999999999999963221           11111        


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                         ...........+..+++.+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       222 ---~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          222 ---KVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             ---HHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             ---HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence               111122233344556778999999999999999999999999999874

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.6e-38  Score=290.48  Aligned_cols=235  Identities=18%  Similarity=0.225  Sum_probs=177.5

Q ss_pred             ccccCCCceEEEEEEC----CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           99 KFTSSSASASWRGTIR----GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .||+|+||.||+|.+.    ++.||+|+.......  ..+.+.+|++++++++||||+++++++ ..+..++||||+++|
T Consensus        24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~  102 (291)
T 1xbb_A           24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELG  102 (291)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred             ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCC
Confidence            7999999999999652    578999987654322  357899999999999999999999998 567789999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++..........+..++.                 +|+|+||+++.+    +.+||+|||++....... ......
T Consensus       103 ~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~----~~~kl~Dfg~~~~~~~~~-~~~~~~  177 (291)
T 1xbb_A          103 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ----HYAKISDFGLSKALRADE-NYYKAQ  177 (291)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET----TEEEECCCTTCEECCTTC-SEEEC-
T ss_pred             CHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCC----CcEEEccCCcceeeccCC-Cccccc
Confidence            9999998876666554443332                 456899999876    569999999998753311 111122


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....|++.|+|||++.+..++.++||||||+++|+|++ |+.||......        ...               ..+.
T Consensus       178 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~---------------~~~~  234 (291)
T 1xbb_A          178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--------EVT---------------AMLE  234 (291)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHH---------------HHHH
T ss_pred             ccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HHH---------------HHHH
Confidence            33457889999999988889999999999999999999 99999643210        111               1111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      .......+..+++.+.+++.+||+.||.+||++.++++.|++++.+..
T Consensus       235 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  282 (291)
T 1xbb_A          235 KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  282 (291)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            111223344567789999999999999999999999999999988754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.3e-38  Score=291.25  Aligned_cols=235  Identities=16%  Similarity=0.257  Sum_probs=182.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+.....   ....+.+.+|+.+|+.++|||||++++++.+.+.+|+||||++
T Consensus        10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~   89 (318)
T 1fot_A           10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE   89 (318)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCC
Confidence            3567999999999999985  7899999875432   2346778899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++......+...+..++                 ++|+|+|||++.+    +.+||+|||+++....       
T Consensus        90 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----g~~kL~Dfg~a~~~~~-------  158 (318)
T 1fot_A           90 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN----GHIKITDFGFAKYVPD-------  158 (318)
T ss_dssp             SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT----SCEEECCCSSCEECSS-------
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCC----CCEEEeecCcceecCC-------
Confidence            99999999876666654443332                 2566999999876    5699999999986432       


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........           
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----------~~~~~~i~-----------  216 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----------MKTYEKIL-----------  216 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHH-----------
T ss_pred             ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----------HHHHHHHH-----------
Confidence            23356899999999999999999999999999999999999999963211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhhc
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      ...  ..++..+++++.+|+.+||+.||.+||     ++.+++   ++-+....+|..+.
T Consensus       217 ~~~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~---~hp~f~~~~~~~~~  271 (318)
T 1fot_A          217 NAE--LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK---NHPWFKEVVWEKLL  271 (318)
T ss_dssp             HCC--CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHH---TSGGGSSCCHHHHH
T ss_pred             hCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHh---cCccccCCCHHHHH
Confidence            111  123445677899999999999999999     777764   45555566676653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6.9e-39  Score=292.15  Aligned_cols=232  Identities=20%  Similarity=0.320  Sum_probs=173.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccccc-------HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLD-------LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~-------~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|++.  ++.||+|+........       .+.+.+|++++++++||||+++++++.+..  ++|||
T Consensus        24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e  101 (287)
T 4f0f_A           24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME  101 (287)
T ss_dssp             EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred             hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence            567999999999999984  7889999875543321       267899999999999999999999987665  69999


Q ss_pred             ccCCCCHHHHhcCCC-CCCccchH-------------------HHHHHhhhcceeecccC-CCccceEEccccccccccc
Q 016850          168 HVSGANLADCLRNPR-NPSFTVLS-------------------TWLSRMQSSSIIVSEEN-AGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~-~~~~~~~~-------------------~~~~~l~~~Nill~~~~-~~~~~~kl~DFG~a~~~~~  226 (381)
                      |+++|+|.+++.... ......+.                   .+|++|+|+||+++.++ .....+||+|||+++....
T Consensus       102 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~  181 (287)
T 4f0f_A          102 FVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH  181 (287)
T ss_dssp             CCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS
T ss_pred             ecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc
Confidence            999999999887654 33333222                   23445678888887653 2234599999999975321


Q ss_pred             CCCCccccccccCCCccccchhhhc--CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQA--SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                             ......||+.|+|||++.  ...++.++|||||||++|||++|+.||.......      .....        
T Consensus       182 -------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~--------  240 (287)
T 4f0f_A          182 -------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK------IKFIN--------  240 (287)
T ss_dssp             -------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH------HHHHH--------
T ss_pred             -------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH------HHHHH--------
Confidence                   234567999999999984  4567899999999999999999999996432210      00011        


Q ss_pred             CccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          305 GVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                            ...........+..+++.+.+|+.+||+.||.+|||+.++++.|+++
T Consensus       241 ------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          241 ------MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             ------HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ------HHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence                  11112223334556678899999999999999999999999999753

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.1e-38  Score=298.15  Aligned_cols=232  Identities=21%  Similarity=0.264  Sum_probs=175.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++.....    ...+|+++|.++ +|||||++++++.+.+.+|+|||||++|
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg  101 (342)
T 2qr7_A           26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG  101 (342)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence            4578999999999999985  78899998754432    345788999888 7999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++.......+..+..++                 +||+|+|||+.+.+.....+||+|||+++.+..    .....
T Consensus       102 ~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~  177 (342)
T 2qr7_A          102 ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA----ENGLL  177 (342)
T ss_dssp             BHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC----TTCCB
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC----CCCce
Confidence            999999887766655544333                 256699999866543335699999999987532    12233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|+|||++.+..++.++|||||||++|||++|+.||......        ...+.......+         ..
T Consensus       178 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~~~~i~~~---------~~  240 (342)
T 2qr7_A          178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--------TPEEILARIGSG---------KF  240 (342)
T ss_dssp             CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--------CHHHHHHHHHHC---------CC
T ss_pred             eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--------CHHHHHHHHccC---------Cc
Confidence            4578999999999998888999999999999999999999999642211        011111111110         00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..+++.+.+||.+||+.||++||++.++++
T Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1112223456788999999999999999999998865

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-38  Score=293.68  Aligned_cols=229  Identities=15%  Similarity=0.218  Sum_probs=174.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.  ++.+|+|.+... ....+.+.+|+++|+.++|||||++++++.+.+.+++|||||++|+
T Consensus         9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~   87 (321)
T 1tki_A            9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD   87 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCB
T ss_pred             eeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCC
Confidence            4567999999999999985  678888887543 3345678999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... ..++..+..++                 +||+|+|||++....  ..+||+|||+++.+..     ....
T Consensus        88 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~--~~~kl~Dfg~a~~~~~-----~~~~  160 (321)
T 1tki_A           88 IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS--STIKIIEFGQARQLKP-----GDNF  160 (321)
T ss_dssp             HHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC--CCEEECCCTTCEECCT-----TCEE
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCC--CCEEEEECCCCeECCC-----CCcc
Confidence            999998754 44544433332                 256699999986322  6799999999987532     1233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|..||......        ....   ....+.. .       
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~---~i~~~~~-~-------  221 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--------QIIE---NIMNAEY-T-------  221 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHH---HHHHTCC-C-------
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--------HHHH---HHHcCCC-C-------
Confidence            4567999999999999888999999999999999999999999642210        1111   1111100 0       


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ........+++++.+|+.+||+.||.+|||+.|+++
T Consensus       222 -~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          222 -FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             000001134678999999999999999999999976

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=8.7e-39  Score=301.98  Aligned_cols=241  Identities=16%  Similarity=0.180  Sum_probs=177.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHH-HhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSV-ICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......   ....+.+|..+ ++.++|||||++++++.+.+.+|+||||+
T Consensus        42 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~  121 (373)
T 2r5t_A           42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI  121 (373)
T ss_dssp             EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCC
Confidence            3577999999999999986  678899987554322   34566778777 56789999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.+++..........+..++                 +||+|+|||++.+    +.+||+|||+++....    ..
T Consensus       122 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~----g~ikL~DFG~a~~~~~----~~  193 (373)
T 2r5t_A          122 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ----GHIVLTDFGLCKENIE----HN  193 (373)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEECCCCBCGGGBC----CC
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCC----CCEEEeeCcccccccc----CC
Confidence            999999999876655544433322                 3567999999887    5699999999986321    12


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......          
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----------~~~~~~i~----------  252 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----------AEMYDNIL----------  252 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----------HHHHHHHH----------
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----------HHHHHHHH----------
Confidence            234567899999999999999999999999999999999999999963211           11111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH-HHHHHHHHHHHhhhhhhhc
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ-VTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-vl~~L~~~~~~~~~~~~~~  368 (381)
                       ...  ..++..++..+.+||.+||+.||.+||++.+ +.+.+++-+.+..+|..+.
T Consensus       253 -~~~--~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~  306 (373)
T 2r5t_A          253 -NKP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLI  306 (373)
T ss_dssp             -HSC--CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHH
T ss_pred             -hcc--cCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHH
Confidence             111  1233446678999999999999999999864 4566667777778888764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.1e-38  Score=299.08  Aligned_cols=230  Identities=20%  Similarity=0.187  Sum_probs=160.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+....  ...+.+.+|+++|++++|||||++++++.+.+..++||||+++|+
T Consensus        57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~  134 (349)
T 2w4o_A           57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE  134 (349)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc--hhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCC
Confidence            3567999999999999996  678999986543  245678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++..........+..++                 +||+|+|||++..+ .++.+||+|||+++....     .....
T Consensus       135 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~-~~~~~kl~Dfg~a~~~~~-----~~~~~  208 (349)
T 2w4o_A          135 LFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA-PDAPLKIADFGLSKIVEH-----QVLMK  208 (349)
T ss_dssp             HHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS-TTCCEEECCCC-----------------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC-CCCCEEEccCccccccCc-----ccccc
Confidence            99999887666655444333                 25669999997511 126699999999986432     12234


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||......          ...........         ..
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----------~~~~~~i~~~~---------~~  269 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD----------QFMFRRILNCE---------YY  269 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH----------HHHHHHHHTTC---------CC
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc----------HHHHHHHHhCC---------Cc
Confidence            567999999999999889999999999999999999999999632211          00011111100         00


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........++..+.+||.+||+.||++|||+.|+++
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111122345678999999999999999999999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=9.1e-39  Score=310.14  Aligned_cols=232  Identities=22%  Similarity=0.372  Sum_probs=179.0

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.++ +..||||+.+.. ....+.+.+|+++|++|+|||||++++++. .+.++||||||++|+|.
T Consensus       193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~  270 (454)
T 1qcf_A          193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL  270 (454)
T ss_dssp             EEEEECCSSEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred             EEEcccCCceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence            567999999999999996 678999987543 345788999999999999999999999986 56789999999999999


Q ss_pred             HHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      ++|....  ..+...+..+                 |+||+|+|||++.+    +.+||+|||+++....   .......
T Consensus       271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~----~~~kl~DFG~a~~~~~---~~~~~~~  343 (454)
T 1qcf_A          271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIADFGLARVIED---NEYTARE  343 (454)
T ss_dssp             HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTT----CCEEECSTTGGGGBCC---HHHHTTC
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCC----CcEEEeeCCCceEcCC---CceeccC
Confidence            9998643  3333322222                 23567999999876    5699999999987532   1111223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+|+.|+|||++....++.++|||||||++|||++ |+.||.....        .....               .+..
T Consensus       344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------~~~~~---------------~i~~  400 (454)
T 1qcf_A          344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIR---------------ALER  400 (454)
T ss_dssp             SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHH---------------HHHH
T ss_pred             CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHH---------------HHHc
Confidence            4457889999999998899999999999999999999 9999964321        01111               1111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ......+..+++.+.+||.+||+.||++|||+.+|++.|++++..
T Consensus       401 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          401 GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            122333455678899999999999999999999999999987643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-38  Score=301.05  Aligned_cols=238  Identities=17%  Similarity=0.240  Sum_probs=166.0

Q ss_pred             ccccccCCCceEEEEEEC---C--ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR---G--KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~--~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|++.   +  ..||+|....... ...+++.+|+.+|++++|||||++++++.+ ++..++||||+
T Consensus        94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~  173 (373)
T 3c1x_A           94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  173 (373)
T ss_dssp             EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred             CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence            467999999999999873   2  2467776543222 246789999999999999999999998764 56789999999


Q ss_pred             CCCCHHHHhcCCCC-CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPRN-PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~~-~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++..... .....+..+                 |+||+|+|||++.+    +.+||+|||+++.+.......
T Consensus       174 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~~~kL~DFG~a~~~~~~~~~~  249 (373)
T 3c1x_A          174 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDS  249 (373)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----CCEEECCC-------------
T ss_pred             CCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCC----CCEEEeecccccccccccccc
Confidence            99999999987543 333322222                 23567999999876    569999999998653322112


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+|+.|+|||++.+..++.++|||||||++|||++ |.+||......        .....             
T Consensus       250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--------~~~~~-------------  308 (373)
T 3c1x_A          250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------DITVY-------------  308 (373)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--------CHHHH-------------
T ss_pred             ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--------HHHHH-------------
Confidence            222344567889999999998999999999999999999999 67777543221        01110             


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                        +........+..+++.+.+++.+||+.||++||++.++++.|++++...
T Consensus       309 --~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          309 --LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             --HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             --HHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence              1111112223445678999999999999999999999999999998753

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2e-38  Score=300.92  Aligned_cols=230  Identities=20%  Similarity=0.225  Sum_probs=176.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|...  ++.||+|+...........+.+|+++|++|+|||||++++++.+.+.+++|||||++|+
T Consensus        55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~  134 (387)
T 1kob_A           55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE  134 (387)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred             EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence            4567999999999999985  77888888765554456789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... ..++..+..++                 +||+|+|||++..+.  ..+||+|||+++.+..     ....
T Consensus       135 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~--~~vkL~DFG~a~~~~~-----~~~~  207 (387)
T 1kob_A          135 LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA--SSVKIIDFGLATKLNP-----DEIV  207 (387)
T ss_dssp             HHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTC--CCEEECCCTTCEECCT-----TSCE
T ss_pred             HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCC--CceEEEecccceecCC-----Ccce
Confidence            999998654 34444333322                 256699999975432  5699999999987532     1223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....        ......   ....         ..
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~---i~~~---------~~  267 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--------LETLQN---VKRC---------DW  267 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHH---HHHC---------CC
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--------HHHHHH---HHhC---------CC
Confidence            456799999999999988999999999999999999999999964221        011111   1100         00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .........+++.+.+||.+||+.||.+|||+.|+++
T Consensus       268 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          268 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            1111222345778999999999999999999999975

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3.2e-38  Score=294.21  Aligned_cols=238  Identities=22%  Similarity=0.326  Sum_probs=180.6

Q ss_pred             cccccccCCCceEEEEEEC---------CceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|.+.         +..||+|+...... ...+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus        39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  118 (334)
T 2pvf_A           39 LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV  118 (334)
T ss_dssp             EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEE
T ss_pred             EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEE
Confidence            3578999999999999873         45789998754432 2457789999999999 99999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCC----------------CCccchHHH-------H----------HHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRN----------------PSFTVLSTW-------L----------SRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~----------------~~~~~~~~~-------~----------~~l~~~Nill~~~~~~~~  211 (381)
                      ||||+++|+|.+++.....                ..+..+..+       +          ++|+|+||+++.+    +
T Consensus       119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~  194 (334)
T 2pvf_A          119 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----N  194 (334)
T ss_dssp             EEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----C
T ss_pred             EEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC----C
Confidence            9999999999999987542                232222222       2          2566999999876    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++.....  ..........+|+.|+|||++.+..++.++|||||||++|||++ |+.||......      
T Consensus       195 ~~kL~Dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------  266 (334)
T 2pvf_A          195 VMKIADFGLARDINNI--DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE------  266 (334)
T ss_dssp             CEEECCCTTCEECTTT--SSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------
T ss_pred             CEEEcccccccccccc--ccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH------
Confidence            6999999999875321  11122334567889999999988889999999999999999999 99998642110      


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                        .....               +........+..++..+.+|+.+||+.||.+||++.++++.|++++....
T Consensus       267 --~~~~~---------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~  321 (334)
T 2pvf_A          267 --ELFKL---------------LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  321 (334)
T ss_dssp             --HHHHH---------------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             --HHHHH---------------HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence              11111               11111222344566789999999999999999999999999999987644

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.6e-38  Score=288.92  Aligned_cols=237  Identities=17%  Similarity=0.245  Sum_probs=172.9

Q ss_pred             ccccccCCCceEEEEEECC-----ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEE-eCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIRG-----KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-----~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|++.+     ..+++|....... ...+.+.+|+.++++++||||+++++++. .++..++||||+
T Consensus        30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~  109 (298)
T 3f66_A           30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  109 (298)
T ss_dssp             EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred             cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence            4679999999999999742     2467777654332 24577899999999999999999999865 466789999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..+.                 ++|+|+||+++.+    +.+||+|||+++.........
T Consensus       110 ~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~----~~~kl~Dfg~a~~~~~~~~~~  185 (298)
T 3f66_A          110 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYS  185 (298)
T ss_dssp             TTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----CCEEECSCGGGCCCSCGGGCB
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCC----CCEEECcccccccccccchhc
Confidence            9999999997643 33433333222                 2566999999876    569999999998754322222


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........||+.|+|||++.+..++.++||||||+++|+|++ |.+||......        ....              
T Consensus       186 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--------~~~~--------------  243 (298)
T 3f66_A          186 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--------DITV--------------  243 (298)
T ss_dssp             C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--------THHH--------------
T ss_pred             cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--------HHHH--------------
Confidence            233445668899999999998899999999999999999999 55666432211        0100              


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                       ..........+..+++.+.+++.+||+.||.+||++.++++.|++++.+
T Consensus       244 -~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          244 -YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             -HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -HHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence             0111111222334567899999999999999999999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-38  Score=294.98  Aligned_cols=242  Identities=19%  Similarity=0.281  Sum_probs=175.4

Q ss_pred             cccccccCCCceEEEEEEC--Cce----EEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKD----VIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~----v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|.+.  ++.    |++|...... ....+.+.+|+.++++++|||||++++++.+.. .++||||
T Consensus        19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~   97 (327)
T 3lzb_A           19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL   97 (327)
T ss_dssp             EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred             EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence            3567999999999999984  443    4666553332 235788999999999999999999999998765 7899999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++.... ......+..++                 +||+|+|||++.+    +.+||+|||+++.+...  .
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~----~~~kL~DfG~a~~~~~~--~  171 (327)
T 3lzb_A           98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAE--E  171 (327)
T ss_dssp             CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET----TEEEECCTTC----------
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCC----CCEEEccCcceeEccCc--c
Confidence            99999999997643 34444333322                 3566999999876    56999999999875321  1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........||+.|+|||++.+..++.++|||||||++|||++ |+.||......                       .+
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----------------------~~  228 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-----------------------EI  228 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----------------------GH
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----------------------HH
Confidence            2222334567889999999999999999999999999999999 99999643221                       11


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                      ...+........+..++..+.+|+.+||+.||.+||++.|+++.|+++......+...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~  286 (327)
T 3lzb_A          229 SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVI  286 (327)
T ss_dssp             HHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHHHBCC
T ss_pred             HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCceEEe
Confidence            1112222223334456778999999999999999999999999999998765555443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.1e-38  Score=296.50  Aligned_cols=233  Identities=18%  Similarity=0.180  Sum_probs=168.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc-----ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR-----RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|...  +..||+|++...     .....+.+.+|+++|++++|||||++++++.+.+..++||||
T Consensus        30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  109 (345)
T 3hko_A           30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL  109 (345)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence            4678999999999999985  678899987543     223467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCC----------------------------------------CCcc-------chHHHH--------
Q 016850          169 VSGANLADCLRNPRN----------------------------------------PSFT-------VLSTWL--------  193 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~----------------------------------------~~~~-------~~~~~~--------  193 (381)
                      |++|+|.+++.....                                        ....       +++..+        
T Consensus       110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  189 (345)
T 3hko_A          110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI  189 (345)
T ss_dssp             CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999962100                                        0011       111222        


Q ss_pred             --HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHH
Q 016850          194 --SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVL  269 (381)
Q Consensus       194 --~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~  269 (381)
                        +||+|+||+++.++.  ..+||+|||+++.+...............||+.|+|||++.+  ..++.++|||||||++|
T Consensus       190 vH~Dlkp~NIll~~~~~--~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~  267 (345)
T 3hko_A          190 CHRDIKPENFLFSTNKS--FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH  267 (345)
T ss_dssp             ECCCCCGGGEEESCSSS--CCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHH
T ss_pred             cccCCChhhEEEecCCC--ceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHH
Confidence              256699999986542  479999999998764333233233456779999999999875  67899999999999999


Q ss_pred             HHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccC--CCCHHHHHHHHHHHHHhhccCCCCCCCh
Q 016850          270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKD--SYPVEVAEKMVLLGLQCVDEDPGKRPDM  347 (381)
Q Consensus       270 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~  347 (381)
                      ||++|+.||.....           .+.......           .....  .....+++.+.+||.+||+.||.+||++
T Consensus       268 el~~g~~pf~~~~~-----------~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~  325 (345)
T 3hko_A          268 LLLMGAVPFPGVND-----------ADTISQVLN-----------KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA  325 (345)
T ss_dssp             HHHHSSCSSCCSSH-----------HHHHHHHHH-----------CCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             HHHHCCCCCCCCCh-----------HHHHHHHHh-----------cccccCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence            99999999964321           111111111           11111  1112356789999999999999999999


Q ss_pred             HHHHH
Q 016850          348 RQVTG  352 (381)
Q Consensus       348 ~evl~  352 (381)
                      .++++
T Consensus       326 ~~~l~  330 (345)
T 3hko_A          326 MRALQ  330 (345)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99865

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=5.3e-38  Score=292.28  Aligned_cols=246  Identities=13%  Similarity=0.122  Sum_probs=179.3

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+.  .++.||||+......  .+.+.+|++++++| +||||+++++++.+.+..++||||+ +|
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (330)
T 2izr_A           13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GP   89 (330)
T ss_dssp             EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CC
Confidence            357799999999999997  488999998654332  34688999999999 9999999999999999999999999 99


Q ss_pred             CHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCC-CccceEEcccccccccccCCCCcc-
Q 016850          173 NLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENA-GSLCAKICHFGTAELCGEVSGNES-  232 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~-~~~~~kl~DFG~a~~~~~~~~~~~-  232 (381)
                      +|.+++... .......+..++                 +||+|+|||++.++. ....+||+|||+++.+........ 
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~  169 (330)
T 2izr_A           90 SLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI  169 (330)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBC
T ss_pred             CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccc
Confidence            999999863 344444433322                 256699999987631 122399999999987543221111 


Q ss_pred             --ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          233 --GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       233 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||........     ............       
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-----~~~~~~i~~~~~-------  237 (330)
T 2izr_A          170 PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-----KERYQKIGDTKR-------  237 (330)
T ss_dssp             CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-----HHHHHHHHHHHH-------
T ss_pred             cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-----HHHHHHHHhhhc-------
Confidence              123467899999999999999999999999999999999999999975432110     011111100000       


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      . ......   ...++ ++.+|+.+||+.||.+||++.+|++.|++++.+.
T Consensus       238 ~-~~~~~~---~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          238 A-TPIEVL---CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             H-SCHHHH---TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             c-CCHHHH---hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            0 000000   00123 8999999999999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-38  Score=294.78  Aligned_cols=247  Identities=19%  Similarity=0.267  Sum_probs=172.3

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc--CCCCcceEEEEEEeC----CeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS--HHSSLIKLLGACVSG----NCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l--~h~nIv~l~~~~~~~----~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.++.||+|++...   ....+.+|.+++..+  +||||+++++++.+.    ..+++||||+
T Consensus        41 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~  117 (337)
T 3mdy_A           41 MVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH  117 (337)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred             EEeEeecCCCeEEEEEEECCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence            5678999999999999999999999987432   234556666666654  999999999999887    7899999999


Q ss_pred             CCCCHHHHhcCCCCCCccch-------------------------HHHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          170 SGANLADCLRNPRNPSFTVL-------------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~-------------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      ++|+|.++++... .....+                         ..+|+||+|+|||++.+    +.+||+|||+++.+
T Consensus       118 ~~g~L~~~l~~~~-~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~----~~~kl~Dfg~a~~~  192 (337)
T 3mdy_A          118 ENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN----GTCCIADLGLAVKF  192 (337)
T ss_dssp             TTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT----SCEEECCCTTCEEC
T ss_pred             CCCcHHHHhhccC-CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC----CCEEEEeCCCceee
Confidence            9999999997643 332222                         12345677888888876    56999999999775


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCCCcc------hhHHHHHHHHHHHHhCCccccccccCCcccccc----hhH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQK------CDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRR----VSV  294 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~----~~~  294 (381)
                      ...............||+.|+|||++.+..++..      +|||||||++|||++|..|+........ ++..    ...
T Consensus       193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~-p~~~~~~~~~~  271 (337)
T 3mdy_A          193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL-PYHDLVPSDPS  271 (337)
T ss_dssp             C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC-TTTTTSCSSCC
T ss_pred             ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc-cHhhhcCCCCc
Confidence            4322222222335679999999999987666554      9999999999999999555432111110 0000    000


Q ss_pred             HHHHHHHHcCCccchhhhhcccccCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          295 VDKASEAVAGGVGGVRKWVDRRLKDSYP-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ........          ......+..+     ..+++.+.+|+.+||+.||.+|||+.+|++.|+.+..+.
T Consensus       272 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          272 YEDMREIV----------CIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             HHHHHHHH----------TTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             hhhhHHHH----------hhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            11111111          0111122222     367889999999999999999999999999999987653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=3.7e-38  Score=291.81  Aligned_cols=252  Identities=16%  Similarity=0.186  Sum_probs=183.8

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e  167 (381)
                      .+.||+|+||.||++.+      .++.||+|+...... ...+.+.+|+++|++++||||+++++++.+  ...+++|||
T Consensus        36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e  115 (318)
T 3lxp_A           36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME  115 (318)
T ss_dssp             EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred             hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence            57799999999999876      367899998765433 246779999999999999999999999987  467899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+++|+|.+++.... .....+..++                 .+|+|+||+++.+    +.+||+|||++....... .
T Consensus       116 ~~~~~~L~~~l~~~~-~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~----~~~kl~Dfg~a~~~~~~~-~  189 (318)
T 3lxp_A          116 YVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND----RLVKIGDFGLAKAVPEGH-E  189 (318)
T ss_dssp             CCTTCBHHHHGGGSC-CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCGGGCEECCTTC-S
T ss_pred             cccCCcHHHHHhhCC-CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCC----CCEEECCccccccccccc-c
Confidence            999999999998754 4444333332                 2456999999876    569999999998754311 1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .........||+.|+|||++.+..++.++|||||||++|+|++|+.||........      ..........  ....+.
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~------~~~~~~~~~~--~~~~~~  261 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFL------ELIGIAQGQM--TVLRLT  261 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH------HHHCSCCHHH--HHHHHH
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhh------hhhcccccch--hHHHHH
Confidence            11223456688999999999988899999999999999999999999863221100      0000000000  001112


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ..+........+..+++.+.+||.+||+.||.+|||+.++++.|+.+..+-.
T Consensus       262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            2233333344455677899999999999999999999999999999977644

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=299.79  Aligned_cols=229  Identities=21%  Similarity=0.202  Sum_probs=168.6

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+|...  ++.||+|++........+.+.+|+++|++|+|||||++++++.+.+.++||||||++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            356999999999999984  789999988765555678899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ......+..+                 |+||+|+|||+..+..  ..+||+|||+++.+..     .....
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~~~kl~DFG~a~~~~~-----~~~~~  246 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA--KQIKIIDFGLARRYKP-----REKLK  246 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTT--TEEEECCCSSCEECCT-----TCBCC
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCC--CcEEEEeCCCceecCC-----ccccc
Confidence            99886543 3333332222                 2356699999853322  6799999999987532     12233


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+.........         ..
T Consensus       247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----------~~~~~~i~~~~---------~~  306 (373)
T 2x4f_A          247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-----------AETLNNILACR---------WD  306 (373)
T ss_dssp             CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHHTC---------CC
T ss_pred             cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhcc---------CC
Confidence            45799999999999988999999999999999999999999964321           11111111100         00


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........+++.+.+||.+||+.||.+||++.|+++
T Consensus       307 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             SCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            011111235678999999999999999999999976

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.4e-38  Score=296.69  Aligned_cols=235  Identities=16%  Similarity=0.194  Sum_probs=182.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++....   ....+.+.+|+.+|+.++|||||++++++.+.+.+|+||||++
T Consensus        45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  124 (350)
T 1rdq_E           45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA  124 (350)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence            3567999999999999985  7899999875432   2346788999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..++                 ++|+|+|||++.+    +.+||+|||+++....       
T Consensus       125 gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----g~~kL~DFg~a~~~~~-------  193 (350)
T 1rdq_E          125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ----GYIQVTDFGFAKRVKG-------  193 (350)
T ss_dssp             TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECSS-------
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCC----CCEEEcccccceeccC-------
Confidence            99999999876666554443332                 3566999999876    5699999999987532       


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......           
T Consensus       194 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----------~~~~~~i~-----------  251 (350)
T 1rdq_E          194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----------IQIYEKIV-----------  251 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH-----------
T ss_pred             CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----------HHHHHHHH-----------
Confidence            12356799999999999999999999999999999999999999963211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhhhhc
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      ..  ...++..+++.+.+||.+||+.||.+||+     +.+|   +++-+....+|..+.
T Consensus       252 ~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei---~~h~~f~~~~w~~~~  306 (350)
T 1rdq_E          252 SG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI---KNHKWFATTDWIAIY  306 (350)
T ss_dssp             HC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHH---HTSGGGTTCCHHHHH
T ss_pred             cC--CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHH---HhCcCcCCCCHHHHh
Confidence            11  12234456778999999999999999998     6665   445566667776553

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=9.1e-39  Score=296.84  Aligned_cols=236  Identities=19%  Similarity=0.299  Sum_probs=173.6

Q ss_pred             ccccccCCCceEEEEEEC--Cce----EEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GKD----VIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~----v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|++.  ++.    |++|....... .....+.+|+.++++++|||||++++++. ++..++||||+
T Consensus        18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~   96 (325)
T 3kex_A           18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL   96 (325)
T ss_dssp             EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred             eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence            467999999999999984  333    66776543322 23456788999999999999999999986 45688999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..+                 |+||+|+|||++.+    +.+||+|||+++.+...  ..
T Consensus        97 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~----~~~kl~Dfg~a~~~~~~--~~  170 (325)
T 3kex_A           97 PLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSP----SQVQVADFGVADLLPPD--DK  170 (325)
T ss_dssp             TTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSS----SCEEECSCSGGGGSCCC--TT
T ss_pred             CCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCC----CeEEECCCCcccccCcc--cc
Confidence            9999999998753 3443333322                 23567999999876    56999999999876432  12


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........||+.|+|||++.+..++.++|||||||++|||++ |+.||......        ..               .
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~---------------~  227 (325)
T 3kex_A          171 QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--------EV---------------P  227 (325)
T ss_dssp             CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--------HH---------------H
T ss_pred             cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--------HH---------------H
Confidence            223345678899999999998899999999999999999999 99999643211        11               1


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ..+........+..++..+.+|+.+||+.||.+||++.++++.|+.+.....
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~  279 (325)
T 3kex_A          228 DLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPP  279 (325)
T ss_dssp             HHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred             HHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            1111111222333456678999999999999999999999999999865443

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=9.6e-39  Score=296.85  Aligned_cols=257  Identities=16%  Similarity=0.170  Sum_probs=183.3

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEE--eCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV--SGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|++      .+..||+|+.........+.+.+|++++++++||||+++++++.  +.+.+++||||
T Consensus        28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~  107 (327)
T 3lxl_A           28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY  107 (327)
T ss_dssp             EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred             hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence            46799999999999995      36789999877665556678999999999999999999999987  45678999999


Q ss_pred             cCCCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++... .......+..++                 ++|+|+||+++.+    +.+||+|||+++...... .
T Consensus       108 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~----~~~kl~Dfg~~~~~~~~~-~  182 (327)
T 3lxl_A          108 LPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESE----AHVKIADFGLAKLLPLDK-D  182 (327)
T ss_dssp             CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET----TEEEECCGGGCEECCTTC-S
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCC----CCEEEcccccceecccCC-c
Confidence            9999999999763 234444433332                 2566999999876    569999999998753211 1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      .........||+.|+|||++.+..++.++|||||||++|+|++|+.||............        ..........+.
T Consensus       183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~  254 (327)
T 3lxl_A          183 YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG--------CERDVPALSRLL  254 (327)
T ss_dssp             EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------------CCHHHHHH
T ss_pred             cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc--------cccccccHHHHH
Confidence            112234466889999999999888999999999999999999999998642221000000        000000001112


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWAD  366 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~  366 (381)
                      ..+........+..+++.+.+|+.+||+.||.+|||+.++++.|+.++.+...|..
T Consensus       255 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~  310 (327)
T 3lxl_A          255 ELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET  310 (327)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---------
T ss_pred             HHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccc
Confidence            22233333444556778899999999999999999999999999999887665543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=4e-38  Score=296.67  Aligned_cols=230  Identities=15%  Similarity=0.153  Sum_probs=164.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||.||+++..  ++.||+|++..... ..+.+.+|+.++++++|||||++++++.+.+.+++|||||++|+|
T Consensus        25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L  103 (361)
T 3uc3_A           25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL  103 (361)
T ss_dssp             EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence            567999999999999995  78899998754332 346789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          175 ADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      .+++......+...+..++                 ++|+|+|||++..+.  ..+||+|||+++...     .......
T Consensus       104 ~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~--~~~kl~Dfg~a~~~~-----~~~~~~~  176 (361)
T 3uc3_A          104 YERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPA--PRLKICDFGYSKSSV-----LHSQPKS  176 (361)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSS--CCEEECCCCCC----------------
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCC--ceEEEeecCcccccc-----ccCCCCC
Confidence            9999876666655444333                 256699999986532  459999999997432     1122345


Q ss_pred             cCCCccccchhhhcCCCCCcc-hhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQK-CDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~-sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.......       .........           ....
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-------~~~~~~~~~-----------~~~~  238 (361)
T 3uc3_A          177 TVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-------DYRKTIQRI-----------LSVK  238 (361)
T ss_dssp             ----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-------CHHHHHHHH-----------HTTC
T ss_pred             CcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-------HHHHHHHHH-----------hcCC
Confidence            679999999999988877655 999999999999999999997432211       011111111           1111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........+++.+.+||.+||+.||.+|||+.|+++
T Consensus       239 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          239 YSIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            111112235678999999999999999999999975

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.8e-38  Score=286.93  Aligned_cols=240  Identities=17%  Similarity=0.230  Sum_probs=177.5

Q ss_pred             ccccccCCCceEEEEEEC--Cc---eEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCee-eEEEecc
Q 016850           97 AKKFTSSSASASWRGTIR--GK---DVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG-YLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~---~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~-~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+.  +.   .+|+|+...... ...+.+.+|+.++++++|||||++++++.+.+.. ++||||+
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~  105 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM  105 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred             CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence            467999999999999873  22   688887654333 2457889999999999999999999999876655 9999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      .+|+|.+++.... ......+..+.                 ++|+|+||+++.+    +.+||+|||+++.+.......
T Consensus       106 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~----~~~kl~Dfg~~~~~~~~~~~~  181 (298)
T 3pls_A          106 CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES----FTVKVADFGLARDILDREYYS  181 (298)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----CCEEECCTTSSCTTTTGGGGC
T ss_pred             cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC----CcEEeCcCCCcccccCCcccc
Confidence            9999999998743 33333332222                 2566999999876    569999999998653322112


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........||+.|+|||.+.+..++.++|||||||++|+|++|..|+......       ..               +..
T Consensus       182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-------~~---------------~~~  239 (298)
T 3pls_A          182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-------FD---------------LTH  239 (298)
T ss_dssp             SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-------GG---------------HHH
T ss_pred             cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-------HH---------------HHH
Confidence            22334567899999999999989999999999999999999965554321110       01               111


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      .+........+..+++.+.+|+.+||+.||.+|||+.++++.|++++.+..
T Consensus       240 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          240 FLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             HhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence            111112222344556789999999999999999999999999999987643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=4.3e-38  Score=292.45  Aligned_cols=228  Identities=13%  Similarity=0.179  Sum_probs=167.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------------
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGN------------  160 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------------  160 (381)
                      ..+.||+|+||.||+|++.  ++.||||++...... ..+.+.+|+++|++|+|||||+++++|.+.+            
T Consensus        10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~   89 (332)
T 3qd2_B           10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW   89 (332)
T ss_dssp             EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred             eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence            4578999999999999985  889999998654433 5678999999999999999999999986543            


Q ss_pred             ---------------------------------------------eeeEEEeccCCCCHHHHhcCCCCCCcc--------
Q 016850          161 ---------------------------------------------CGYLVYEHVSGANLADCLRNPRNPSFT--------  187 (381)
Q Consensus       161 ---------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~--------  187 (381)
                                                                   .+++|||||++|+|.+++.........        
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i  169 (332)
T 3qd2_B           90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHI  169 (332)
T ss_dssp             ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHH
T ss_pred             hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHH
Confidence                                                         379999999999999999876543221        


Q ss_pred             --chHHH----------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc--------cccccccCCCccccch
Q 016850          188 --VLSTW----------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE--------SGKVNKIEGTRGYMAP  247 (381)
Q Consensus       188 --~~~~~----------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~--------~~~~~~~~gt~~y~aP  247 (381)
                        +++..          |+||||+||+++.+    +.+||+|||+++.........        ........||+.|+||
T Consensus       170 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  245 (332)
T 3qd2_B          170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD----DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP  245 (332)
T ss_dssp             HHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCH
T ss_pred             HHHHHHHHHHHHhCCeeecCCCcccEEEeCC----CCEEEeecCcccccccchhhccccccccccccccccCCCcCccCh
Confidence              11222          23567999999876    569999999998764321111        1223456799999999


Q ss_pred             hhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHH
Q 016850          248 EFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAE  327 (381)
Q Consensus       248 E~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (381)
                      |++.+..++.++|||||||++|||++|..|+...             ........            ....+......++
T Consensus       246 E~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------------~~~~~~~~------------~~~~~~~~~~~~~  300 (332)
T 3qd2_B          246 EQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------------VRIITDVR------------NLKFPLLFTQKYP  300 (332)
T ss_dssp             HHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------------HHHHHHHH------------TTCCCHHHHHHCH
T ss_pred             HHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------------HHHHHHhh------------ccCCCcccccCCh
Confidence            9999989999999999999999999997765311             11100000            0001111234567


Q ss_pred             HHHHHHHHhhccCCCCCCChHHHHH
Q 016850          328 KMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       328 ~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+.+|+.+||+.||.+||++.|+++
T Consensus       301 ~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          301 QEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHccCCCCcCCCHHHHhh
Confidence            8899999999999999999999975

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.1e-38  Score=295.28  Aligned_cols=223  Identities=17%  Similarity=0.199  Sum_probs=174.4

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+  .++.||+|++....   ......+.+|+++|+.++|||||++++++.+.+..++||||+ 
T Consensus        13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-   91 (336)
T 3h4j_B           13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-   91 (336)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence            457899999999999998  47899999875322   223467899999999999999999999999999999999999 


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..++.                 ||+|+|||++++    +.+||+|||++.....     ..
T Consensus        92 ~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~----~~~kl~DFG~s~~~~~-----~~  162 (336)
T 3h4j_B           92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN----LNVKIADFGLSNIMTD-----GN  162 (336)
T ss_dssp             CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTT----CCEEECCSSCTBTTTT-----SB
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCC----CCEEEEEeccceeccC-----Cc
Confidence            799999998766666555443332                 566999999887    5699999999976432     22


Q ss_pred             cccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.........                       ..
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----------------------~~  219 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----------------------KK  219 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----------------------CC
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----------------------HH
Confidence            3345679999999999988776 78999999999999999999999643221110                       00


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +.. .....+..+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       220 i~~-~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          220 VNS-CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             CCS-SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHc-CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            000 011234456778999999999999999999999965

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=4.8e-38  Score=285.80  Aligned_cols=238  Identities=18%  Similarity=0.284  Sum_probs=175.9

Q ss_pred             cccccccCCCceEEEEEECC-----ceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRG-----KDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-----~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|.+.+     ..||+|....... ...+.+.+|+.++++++||||+++++++.++ ..++||||+
T Consensus        16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~   94 (281)
T 3cc6_A           16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMELY   94 (281)
T ss_dssp             EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEECC
T ss_pred             EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEecC
Confidence            35679999999999998742     2488887654422 2467899999999999999999999998754 568999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ......+..+.                 ++|+|+||+++.+    ..+||+|||++.....   ..
T Consensus        95 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~---~~  167 (281)
T 3cc6_A           95 PYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP----ECVKLGDFGLSRYIED---ED  167 (281)
T ss_dssp             TTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEET----TEEEECCCCGGGCC-------
T ss_pred             CCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCC----CcEEeCccCCCccccc---cc
Confidence            9999999997643 24433332222                 2566999999876    5699999999987532   11


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......        .....             
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--------~~~~~-------------  226 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--------DVIGV-------------  226 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--------GHHHH-------------
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--------HHHHH-------------
Confidence            122334567889999999988899999999999999999998 99999633221        11111             


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNW  364 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~  364 (381)
                        +........+..+++.+.+++.+||+.||.+||++.|+++.|++++...++.
T Consensus       227 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~i  278 (281)
T 3cc6_A          227 --LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDI  278 (281)
T ss_dssp             --HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred             --HhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhhh
Confidence              1111112233345678999999999999999999999999999998876543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=4.3e-38  Score=292.31  Aligned_cols=235  Identities=20%  Similarity=0.221  Sum_probs=156.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|.+.  ++.||+|++...   ....+.+|+.+++.+. |||||++++++.+.+..|+|||||++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            467999999999999995  788999987432   3567889999999997 9999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++.......+..+..++.                 ||+|+|||++..+ .+..+||+|||+++....    ......
T Consensus        93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-~~~~~kl~Dfg~a~~~~~----~~~~~~  167 (325)
T 3kn6_A           93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN-DNLEIKIIDFGFARLKPP----DNQPLK  167 (325)
T ss_dssp             HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC-----CEEEECCCTTCEECCC----------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC-CcccEEEeccccceecCC----CCCccc
Confidence            999998877666555444333                 4568999987642 124699999999986432    222344


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+||+.|+|||++.+..++.++|||||||++|+|++|+.||.........    ....+.......+ .        ..
T Consensus       168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~~~~~~~~i~~~-~--------~~  234 (325)
T 3kn6_A          168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC----TSAVEIMKKIKKG-D--------FS  234 (325)
T ss_dssp             ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C----CCHHHHHHHHTTT-C--------CC
T ss_pred             ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc----ccHHHHHHHHHcC-C--------CC
Confidence            567899999999999889999999999999999999999999743321100    0111111111100 0        00


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........+++.+.+||.+||+.||.+|||+.|+++
T Consensus       235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            000111235678999999999999999999999863

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=4.1e-38  Score=292.61  Aligned_cols=240  Identities=25%  Similarity=0.330  Sum_probs=178.9

Q ss_pred             cccccccCCCceEEEEEEC--CceE--EEEEecccc-cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDV--IIFQRKLRR-SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v--~vk~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.  +..+  ++|...... ....+.+.+|+++|+++ +||||+++++++.+.+..++||||+
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~  108 (327)
T 1fvr_A           29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA  108 (327)
T ss_dssp             EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence            3567999999999999874  4444  777654322 22456789999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHhcCCC----------------CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEc
Q 016850          170 SGANLADCLRNPR----------------NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKIC  216 (381)
Q Consensus       170 ~~gsL~~~l~~~~----------------~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~  216 (381)
                      ++|+|.+++....                ......+..++                 ++|+|+||+++.+    +.+||+
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~----~~~kL~  184 (327)
T 1fvr_A          109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN----YVAKIA  184 (327)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG----GCEEEC
T ss_pred             CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCC----CeEEEc
Confidence            9999999998754                34433333332                 2566999999876    569999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |||+++....     ........+++.|+|||++.+..++.++|||||||++|||++ |+.||......        ...
T Consensus       185 Dfg~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--------~~~  251 (327)
T 1fvr_A          185 DFGLSRGQEV-----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--------ELY  251 (327)
T ss_dssp             CTTCEESSCE-----ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHH
T ss_pred             ccCcCccccc-----cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--------HHH
Confidence            9999975321     112234557889999999988889999999999999999998 99999642210        011


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhh
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                                     ..+........+..+++.+.+|+.+||+.||.+||++.++++.|+.++.+.+.+...
T Consensus       252 ---------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~  308 (327)
T 1fvr_A          252 ---------------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT  308 (327)
T ss_dssp             ---------------HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBCC
T ss_pred             ---------------HHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcccc
Confidence                           111111222334456678999999999999999999999999999999887655443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=9.2e-38  Score=286.69  Aligned_cols=246  Identities=15%  Similarity=0.196  Sum_probs=179.0

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC--CeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSG--NCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lv~e  167 (381)
                      .+.||+|+||.||+|++      .++.||+|+...... ...+.+.+|+++|++++||||+++++++.+.  +.+++|||
T Consensus        26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e  105 (302)
T 4e5w_A           26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME  105 (302)
T ss_dssp             EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred             hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence            56799999999999994      378899998764433 3568899999999999999999999999876  66899999


Q ss_pred             ccCCCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          168 HVSGANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       168 ~~~~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |+++|+|.+++... .......+..++                 .+|+|+||+++.+    +.+||+|||++....... 
T Consensus       106 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~----~~~kl~Dfg~~~~~~~~~-  180 (302)
T 4e5w_A          106 FLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE----HQVKIGDFGLTKAIETDK-  180 (302)
T ss_dssp             CCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET----TEEEECCCTTCEECCTTC-
T ss_pred             eCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCC----CCEEECcccccccccCCC-
Confidence            99999999999543 334444333322                 2456899999876    569999999998754311 


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCC---cccccchhHHHHHHHHHcCCc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG---IDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  306 (381)
                      ..........||..|+|||++.+..++.++||||||+++|+|++|..|+.......   ............         
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------  251 (302)
T 4e5w_A          181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR---------  251 (302)
T ss_dssp             CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH---------
T ss_pred             cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH---------
Confidence            11123345668999999999998899999999999999999999999875321100   000000000000         


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                        +...+........+..+++.+.+|+.+||+.||.+|||+.++++.|++++
T Consensus       252 --~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          252 --LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             --HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence              11112222233345567788999999999999999999999999999875

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2.5e-38  Score=292.26  Aligned_cols=238  Identities=22%  Similarity=0.285  Sum_probs=178.6

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCC-eeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGN-CGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~-~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.       ++.||+|+....... ..+.+.+|++++.++ +||||+++++++...+ .+++|
T Consensus        31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv  110 (316)
T 2xir_A           31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI  110 (316)
T ss_dssp             EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred             eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence            4577999999999999852       478899987554332 456789999999999 7999999999988754 58999


Q ss_pred             EeccCCCCHHHHhcCCCC----------------CCccchHH-------H----------HHHhhhcceeecccCCCccc
Q 016850          166 YEHVSGANLADCLRNPRN----------------PSFTVLST-------W----------LSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~----------------~~~~~~~~-------~----------~~~l~~~Nill~~~~~~~~~  212 (381)
                      |||+++|+|.+++.....                .....+..       .          |++|+|+||+++.+    +.
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~----~~  186 (316)
T 2xir_A          111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NV  186 (316)
T ss_dssp             EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GC
T ss_pred             EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC----CC
Confidence            999999999999987553                22222222       2          22566999999876    56


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRR  291 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~  291 (381)
                      +||+|||+++.+...  ..........||+.|+|||++.+..++.++|||||||++|||++ |+.||......       
T Consensus       187 ~kl~Dfg~~~~~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-------  257 (316)
T 2xir_A          187 VKICDFGLARDIYKD--PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------  257 (316)
T ss_dssp             EEECCCGGGSCTTTC--TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-------
T ss_pred             EEECCCccccccccC--ccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-------
Confidence            999999999865321  11122344568899999999998899999999999999999998 99999643211       


Q ss_pred             hhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          292 VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      .....               .+........+..+++.+.+++.+||+.||.+|||+.++++.|+.++.+.
T Consensus       258 ~~~~~---------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          258 EEFCR---------------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             HHHHH---------------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHH---------------HhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            01111               11111122233445678999999999999999999999999999998654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.3e-38  Score=298.23  Aligned_cols=253  Identities=15%  Similarity=0.195  Sum_probs=184.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC--eeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGN--CGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++..... ...+.+.+|+++|++++|||||++++++.+.+  ..++|||||+
T Consensus        13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~   92 (396)
T 4eut_A           13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP   92 (396)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred             EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence            3567999999999999996  78999998764332 35678889999999999999999999998755  7899999999


Q ss_pred             CCCHHHHhcCCCC---CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          171 GANLADCLRNPRN---PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       171 ~gsL~~~l~~~~~---~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +|+|.+++.....   .+...+..++                 +||+|+|||+......+..+||+|||+++.+..    
T Consensus        93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~----  168 (396)
T 4eut_A           93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED----  168 (396)
T ss_dssp             TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCC----
T ss_pred             CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccC----
Confidence            9999999987543   4444333332                 256699998833222336799999999987532    


Q ss_pred             ccccccccCCCccccchhhhcC--------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS--------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                       ........||+.|+|||++.+        ..++.++|||||||++|||++|+.||........       ..+......
T Consensus       169 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~-------~~~~~~~~~  240 (396)
T 4eut_A          169 -DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR-------NKEVMYKII  240 (396)
T ss_dssp             -GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT-------CHHHHHHHH
T ss_pred             -CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc-------hHHHHHHHh
Confidence             222345679999999998864        5678999999999999999999999974332111       111112222


Q ss_pred             cCCccchh-----------hhh-cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          303 AGGVGGVR-----------KWV-DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       303 ~~~~~~~~-----------~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .+......           .|. ...........+++.+.+++.+||+.||++||++.++++.+++++.+
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            11111000           000 00111234577889999999999999999999999999999998764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.4e-38  Score=306.89  Aligned_cols=232  Identities=25%  Similarity=0.376  Sum_probs=173.4

Q ss_pred             ccccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+.+ ..||||+..... ...+.+.+|+++|++|+|||||++++++.+ +..+||||||++|+|.
T Consensus       189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~  266 (452)
T 1fmk_A          189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL  266 (452)
T ss_dssp             EEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred             eeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence            5679999999999999974 678888865432 356789999999999999999999999876 6789999999999999


Q ss_pred             HHhcCC--CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNP--RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~--~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      ++|...  .......+..+                 |+||+|+|||++++    +.+||+|||+++....   .......
T Consensus       267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~----~~~kl~DfG~a~~~~~---~~~~~~~  339 (452)
T 1fmk_A          267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIED---NEYTARQ  339 (452)
T ss_dssp             HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEECCCCTTC--------------
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCC----CCEEECCCccceecCC---Cceeccc
Confidence            999753  23443333222                 23566999999876    5699999999987532   1112233


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+++.|+|||++.++.++.++|||||||++|||++ |+.||......        ....               .+..
T Consensus       340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--------~~~~---------------~i~~  396 (452)
T 1fmk_A          340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLD---------------QVER  396 (452)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHH---------------HHHT
T ss_pred             CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--------HHHH---------------HHHc
Confidence            4557889999999988899999999999999999999 99999643210        1111               1111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ......+..+++.+.+||.+||+.||++|||+.+|++.|++++..
T Consensus       397 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          397 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            222334456678899999999999999999999999999987643

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.8e-38  Score=293.42  Aligned_cols=237  Identities=20%  Similarity=0.264  Sum_probs=178.7

Q ss_pred             ccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|.+.+       ..||+|........ ..+.+.+|+.+|+++ +|||||++++++.+.+..++|||
T Consensus        51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e  130 (333)
T 2i1m_A           51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE  130 (333)
T ss_dssp             EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence            5679999999999999852       36888887554332 457799999999999 89999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC--------------CCCccchHH-------H----------HHHhhhcceeecccCCCccceEEc
Q 016850          168 HVSGANLADCLRNPR--------------NPSFTVLST-------W----------LSRMQSSSIIVSEENAGSLCAKIC  216 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~--------------~~~~~~~~~-------~----------~~~l~~~Nill~~~~~~~~~~kl~  216 (381)
                      |+++|+|.+++....              ......+..       .          |++|+|+||+++.+    +.+||+
T Consensus       131 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~----~~~kl~  206 (333)
T 2i1m_A          131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG----HVAKIG  206 (333)
T ss_dssp             CCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGG----GEEEBC
T ss_pred             cCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCC----CeEEEC
Confidence            999999999997531              223222222       2          22566889888876    669999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |||+++.....  ..........||+.|+|||++.+..++.++|||||||++|||++ |..||.......       .  
T Consensus       207 Dfg~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-------~--  275 (333)
T 2i1m_A          207 DFGLARDIMND--SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-------K--  275 (333)
T ss_dssp             CCGGGCCGGGC--TTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-------H--
T ss_pred             ccccccccccc--cceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-------H--
Confidence            99999865321  11112234557889999999988899999999999999999998 999986432110       0  


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                                   +...+........+..+++.+.+|+.+||+.||.+|||+.+|++.|+++..+.
T Consensus       276 -------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  328 (333)
T 2i1m_A          276 -------------FYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED  328 (333)
T ss_dssp             -------------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence                         11111111222233345678999999999999999999999999999987764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.3e-39  Score=308.43  Aligned_cols=254  Identities=17%  Similarity=0.199  Sum_probs=183.4

Q ss_pred             HHHHHHHhcCC-cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEe
Q 016850           85 LSEICAATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVS  158 (381)
Q Consensus        85 ~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~  158 (381)
                      +.++....++| ..+.||+|+||.||+|++.  ++.||+|++.....   ...+.+.+|+.+|..++|||||++++++.+
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            34444445566 4567899999999999985  78999998754221   123458899999999999999999999999


Q ss_pred             CCeeeEEEeccCCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccccc
Q 016850          159 GNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       159 ~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      .+.+|||||||++|+|.++|...+ ..++..+..+                 |+||||+|||++.+    +.+||+|||+
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~----g~vkL~DFGl  208 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC----GHIRLADFGS  208 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTT
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCC----CCEEEeechh
Confidence            999999999999999999997643 4554433322                 23567999999887    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhc-------CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchh
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQA-------SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVS  293 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~  293 (381)
                      ++.+..   .........+||+.|+|||++.       ...|+.++|||||||++|||++|+.||.....          
T Consensus       209 a~~~~~---~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----------  275 (412)
T 2vd5_A          209 CLKLRA---DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST----------  275 (412)
T ss_dssp             CEECCT---TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----------
T ss_pred             heeccC---CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH----------
Confidence            987532   1112234568999999999987       35789999999999999999999999964221          


Q ss_pred             HHHHHHHHHcCCccchhhhhcccc-cCCCCHHHHHHHHHHHHHhhccCCCCCC---ChHHHHHHHHHHHHHhhhhhhhcC
Q 016850          294 VVDKASEAVAGGVGGVRKWVDRRL-KDSYPVEVAEKMVLLGLQCVDEDPGKRP---DMRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                       .+.......        . .... .+..+..+++++.+||.+||. +|.+|+   +++|+   +++-+....+|+.+..
T Consensus       276 -~~~~~~i~~--------~-~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei---~~Hpff~~i~w~~l~~  341 (412)
T 2vd5_A          276 -AETYGKIVH--------Y-KEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDF---RTHPFFFGLDWDGLRD  341 (412)
T ss_dssp             -HHHHHHHHT--------H-HHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHH---HTSGGGTTCCSTTSTT
T ss_pred             -HHHHHHHHh--------c-ccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHH---hcCCCcCCCCHHHHhh
Confidence             111111110        0 0000 111123467889999999999 999985   66666   5566777778877644

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=2.9e-38  Score=296.59  Aligned_cols=231  Identities=22%  Similarity=0.262  Sum_probs=171.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc-----cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR-----SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++....     ....+.+.+|+.+|++++|||||++++++.+.+.+|+||||
T Consensus        28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~  107 (351)
T 3c0i_A           28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEF  107 (351)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeC
Confidence            4678999999999999985  7899999875432     12467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC----CCCccchHHH-------H----------HHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          169 VSGANLADCLRNPR----NPSFTVLSTW-------L----------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       169 ~~~gsL~~~l~~~~----~~~~~~~~~~-------~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |++|+|.+++....    ...+..+..+       +          +||+|+|||++.++ ....+||+|||+++.+.. 
T Consensus       108 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~-~~~~vkl~Dfg~a~~~~~-  185 (351)
T 3c0i_A          108 MDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE-NSAPVKLGGFGVAIQLGE-  185 (351)
T ss_dssp             CSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS-TTCCEEECCCTTCEECCT-
T ss_pred             CCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC-CCCcEEEecCcceeEecC-
Confidence            99999998886432    2343332222       2          25668888887642 124599999999987543 


Q ss_pred             CCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                         ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.....         ....   ....+...
T Consensus       186 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~---~i~~~~~~  250 (351)
T 3c0i_A          186 ---SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFE---GIIKGKYK  250 (351)
T ss_dssp             ---TSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHH---HHHHTCCC
T ss_pred             ---CCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHH---HHHcCCCC
Confidence               11223456799999999999988999999999999999999999999964211         1111   11111000


Q ss_pred             chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                               ........+++.+.+||.+||+.||++|||+.++++
T Consensus       251 ---------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          251 ---------MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             ---------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---------CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                     000000134678999999999999999999999975

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=6.2e-39  Score=306.33  Aligned_cols=241  Identities=15%  Similarity=0.222  Sum_probs=177.7

Q ss_pred             hcCC-cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           92 TNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      .++| ..+.||+|+||+||+|++.  ++.||+|++....   ....+.+.+|+.+|+.++|||||+++++|.+.+.+|||
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            3445 4567999999999999995  6789999865421   12345588999999999999999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||++|+|.+++.... .++..+..+                 |+||||+|||++.+    +.+||+|||+++.+..  
T Consensus       148 ~E~~~gg~L~~~l~~~~-~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~----g~ikL~DFG~a~~~~~--  220 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS----GHLKLADFGTCMKMNK--  220 (410)
T ss_dssp             ECCCTTEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECCT--
T ss_pred             EeCCCCCcHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCC----CCEEEeccceeEeecc--
Confidence            99999999999997643 443333222                 23567999999877    5699999999987532  


Q ss_pred             CCccccccccCCCccccchhhhcCCC----CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGV----VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                       .........+||+.|+|||++.+..    ++.++|||||||++|||++|+.||.....           .+.....   
T Consensus       221 -~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----------~~~~~~i---  285 (410)
T 3v8s_A          221 -EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----------VGTYSKI---  285 (410)
T ss_dssp             -TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHH---
T ss_pred             -CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----------hhHHHHH---
Confidence             1222334678999999999987654    88999999999999999999999963221           1111111   


Q ss_pred             Cccchhhhhccc--ccCCCCHHHHHHHHHHHHHhhccCCCC--CCChHHHHHHHHHHHHHhhhhh
Q 016850          305 GVGGVRKWVDRR--LKDSYPVEVAEKMVLLGLQCVDEDPGK--RPDMRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       305 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~L~~~~~~~~~~~  365 (381)
                              ....  +.......+++.+.+||.+||+.+|.+  ||++.||++   +-+.+..+|.
T Consensus       286 --------~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~---Hp~f~~~~w~  339 (410)
T 3v8s_A          286 --------MNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR---HLFFKNDQWA  339 (410)
T ss_dssp             --------HTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT---SGGGCCSSCC
T ss_pred             --------HhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc---CccccCCCHH
Confidence                    1111  111111245678999999999999988  999998854   4555555553

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.3e-38  Score=293.38  Aligned_cols=242  Identities=16%  Similarity=0.210  Sum_probs=174.7

Q ss_pred             cccccccCCCceEEEEEE-----CCceEEEEEecccc----cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTI-----RGKDVIIFQRKLRR----SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|+.     .++.||+|+.....    ......+.+|+.+|++++|||||++++++.+.+.+|+||
T Consensus        21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  100 (327)
T 3a62_A           21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL  100 (327)
T ss_dssp             EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEE
Confidence            356799999999999987     47889999876432    223566889999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |||++|+|.+++..........+..++                 ++|+|+|||++.+    +.+||+|||+++....   
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~----~~~kl~Dfg~~~~~~~---  173 (327)
T 3a62_A          101 EYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQ----GHVKLTDFGLCKESIH---  173 (327)
T ss_dssp             ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTT----SCEEECCCSCC--------
T ss_pred             eCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCC----CcEEEEeCCccccccc---
Confidence            999999999999876655544333322                 2566899999876    5699999999975321   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                       ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.....           ........       
T Consensus       174 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------~~~~~~i~-------  234 (327)
T 3a62_A          174 -DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----------KKTIDKIL-------  234 (327)
T ss_dssp             ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHH-------
T ss_pred             -CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHH-------
Confidence             11223456799999999999988999999999999999999999999964221           11111111       


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH--HHHHHHHHHHHHhhhhhhhcC
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR--QVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~--evl~~L~~~~~~~~~~~~~~~  369 (381)
                          ..  ....+..+++.+.+|+.+||+.||.+||++.  .+.+.|++-+.+..+|+....
T Consensus       235 ----~~--~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~  290 (327)
T 3a62_A          235 ----KC--KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLA  290 (327)
T ss_dssp             ----HT--CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHT
T ss_pred             ----hC--CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhh
Confidence                11  1123445667899999999999999999554  455556677777777776543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=7.6e-38  Score=282.03  Aligned_cols=233  Identities=18%  Similarity=0.252  Sum_probs=179.4

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+. ++.||+|+..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|+|.
T Consensus        13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   91 (267)
T 3t9t_A           13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS   91 (267)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred             eeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence            567999999999999985 6788888875433 34678999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ......+..++                 .+|+|+||+++.+    ..+||+|||++.....   ........
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~----~~~kl~dfg~~~~~~~---~~~~~~~~  164 (267)
T 3t9t_A           92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN----QVIKVSDFGMTRFVLD---DQYTSSTG  164 (267)
T ss_dssp             HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGG----GCEEECCTTGGGGBCC---HHHHSTTS
T ss_pred             HHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCC----CCEEEccccccccccc---cccccccc
Confidence            9997653 34444333222                 2556999999876    5699999999986422   11122234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..|++.|+|||++.+..++.++||||||+++|+|++ |+.||.....           .......            ...
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~i------------~~~  221 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----------SEVVEDI------------STG  221 (267)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHHH------------HTT
T ss_pred             ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----------HHHHHHH------------hcC
Confidence            567889999999988889999999999999999999 8999864211           1111111            111


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .....+..+++.+.+++.+||+.||.+||++.++++.|+++..+
T Consensus       222 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          222 FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            11222334567899999999999999999999999999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4e-38  Score=285.82  Aligned_cols=229  Identities=22%  Similarity=0.281  Sum_probs=170.6

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-CeeeEEEeccCCCCH
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG-NCGYLVYEHVSGANL  174 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-~~~~lv~e~~~~gsL  174 (381)
                      ..+.||+|+||.||+|.+.++.||+|+...  ....+.+.+|++++++++||||+++++++.+. +..++||||+++|+|
T Consensus        25 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L  102 (278)
T 1byg_A           25 LLQTIGKGEFGDVMLGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL  102 (278)
T ss_dssp             EEEEEEECSSCEEEEEEETTEEEEEEECCC--CC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred             EEeEEecCCCceEEEEEEcCCEEEEEEecc--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence            356799999999999999999999998653  33567899999999999999999999987654 578999999999999


Q ss_pred             HHHhcCCCC--CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPRN--PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~~--~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++.....  .+...+..+                 |.+|+|+||+++.+    +.+||+|||++.....       ..
T Consensus       103 ~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~~l~Dfg~~~~~~~-------~~  171 (278)
T 1byg_A          103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED----NVAKVSDFGLTKEASS-------TQ  171 (278)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----SCEEECCCCC---------------
T ss_pred             HHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCC----CcEEEeeccccccccc-------cc
Confidence            999976432  333322222                 22566999999876    5699999999876422       12


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+++.|+|||++.+..++.++||||||+++|||++ |+.||......        ..               ...+.
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~---------------~~~~~  228 (278)
T 1byg_A          172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--------DV---------------VPRVE  228 (278)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--------GH---------------HHHHT
T ss_pred             cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--------HH---------------HHHHh
Confidence            23467899999999988899999999999999999998 99998643211        11               11111


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .......+..+++.+.+++.+||+.||.+||++.++++.|+++...
T Consensus       229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          229 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            1122233445677899999999999999999999999999998664

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=8.6e-38  Score=294.82  Aligned_cols=250  Identities=8%  Similarity=0.089  Sum_probs=175.6

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-----------cHHHHHHHHHHHhhcCCCCcceEEEEEE
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-----------DLEQLRERLSVICRSHHSSLIKLLGACV  157 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-----------~~~~~~~E~~il~~l~h~nIv~l~~~~~  157 (381)
                      ..+.||+|+||.||+|.+.       ++.||+|+.......           ....+.+|+..+..++|||||++++++.
T Consensus        39 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~  118 (364)
T 3op5_A           39 VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGL  118 (364)
T ss_dssp             EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEE
T ss_pred             EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeee
Confidence            3577999999999999985       367999986544321           1122345666777788999999999987


Q ss_pred             eC----CeeeEEEeccCCCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEE
Q 016850          158 SG----NCGYLVYEHVSGANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKI  215 (381)
Q Consensus       158 ~~----~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl  215 (381)
                      ..    ...+|||||| +|+|.+++... ..+++..+..++                 +||+|+|||++....  ..+||
T Consensus       119 ~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~--~~~kl  195 (364)
T 3op5_A          119 HDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP--DQVYL  195 (364)
T ss_dssp             EEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT--TCEEE
T ss_pred             eccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC--CeEEE
Confidence            64    4589999999 99999999765 345544443332                 356799999983221  67999


Q ss_pred             cccccccccccCCCCc---cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          216 CHFGTAELCGEVSGNE---SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       216 ~DFG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      +|||+++.+.......   ........||+.|+|||++.+..++.++|||||||++|||++|+.||......       .
T Consensus       196 ~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-------~  268 (364)
T 3op5_A          196 VDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-------P  268 (364)
T ss_dssp             CCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-------H
T ss_pred             EECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-------H
Confidence            9999998764322111   11224456999999999999989999999999999999999999999743221       0


Q ss_pred             hHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          293 SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ...........   ..+..++++.+.   ...+++.+.+|+.+||+.||.+||++.+|++.|++++.+.
T Consensus       269 ~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          269 KYVRDSKIRYR---ENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             HHHHHHHHHHH---HCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhh---hhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            11111111110   112222222221   1133568999999999999999999999999999998753

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.2e-37  Score=296.44  Aligned_cols=250  Identities=13%  Similarity=0.114  Sum_probs=171.7

Q ss_pred             cccccccC--CCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSS--SASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G--~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|  +||.||+|++.  ++.||||++......  ..+.+.+|+.+|++++|||||++++++.+.+.+|+|||||
T Consensus        29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  108 (389)
T 3gni_B           29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM  108 (389)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence            35679999  99999999996  889999998654432  3567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC--CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC-
Q 016850          170 SGANLADCLRNP--RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG-  229 (381)
Q Consensus       170 ~~gsL~~~l~~~--~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~-  229 (381)
                      ++|+|.+++...  .......+..++                 +||||+|||++.+    +.+||+|||++........ 
T Consensus       109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~----~~~kl~dfg~~~~~~~~~~~  184 (389)
T 3gni_B          109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD----GKVYLSGLRSNLSMISHGQR  184 (389)
T ss_dssp             TTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----CCEEECCGGGCEECEETTEE
T ss_pred             CCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CCEEEcccccceeecccccc
Confidence            999999999765  344444333322                 3566999999876    5699999999865422111 


Q ss_pred             --CccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          230 --NESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       230 --~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                        ..........||+.|+|||++.+  ..++.++|||||||++|||++|+.||...........   .............
T Consensus       185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~~  261 (389)
T 3gni_B          185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE---KLNGTVPCLLDTS  261 (389)
T ss_dssp             CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH---C------------
T ss_pred             ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH---HhcCCCCcccccc
Confidence              11112234579999999999987  5789999999999999999999999975332211000   0000000000000


Q ss_pred             ----------------ccchhhhh---------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 ----------------VGGVRKWV---------DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 ----------------~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                      ...+....         ........+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                            00000000         000011123446678999999999999999999999974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5e-38  Score=298.98  Aligned_cols=228  Identities=16%  Similarity=0.270  Sum_probs=168.1

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEeccccc--ccHHHHHHHHHHHhhcC--CCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRS--LDLEQLRERLSVICRSH--HSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|... ++.||||++.....  ...+.+.+|+++|++|+  |||||++++++...+.+|||||+ .
T Consensus        60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~-~  138 (390)
T 2zmd_A           60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-G  138 (390)
T ss_dssp             EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEEC-C
T ss_pred             EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEec-C
Confidence            3567999999999999886 77899998765432  24577999999999996  59999999999999999999995 5


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..+                 |+||+|+|||+++     ..+||+|||+++.+...  ....
T Consensus       139 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~-----~~~kl~DFG~a~~~~~~--~~~~  211 (390)
T 2zmd_A          139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQMQPD--TTSV  211 (390)
T ss_dssp             SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESS-----SCEEECCCSSSCCC---------
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEEC-----CeEEEEecCccccccCC--Cccc
Confidence            8999999987665554333322                 2356699999954     45999999999875321  1112


Q ss_pred             cccccCCCccccchhhhcC-----------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          234 KVNKIEGTRGYMAPEFQAS-----------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      .....+||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....          ....     
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----------~~~~-----  276 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----------QISK-----  276 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----------HHHH-----
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH----------HHHH-----
Confidence            2345679999999999865           3689999999999999999999999963221          1111     


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            +..+++......++...+..+.+||.+||+.||.+||++.|+++
T Consensus       277 ------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          277 ------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             ------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ------HHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence                  11122222222233334568999999999999999999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.1e-38  Score=294.65  Aligned_cols=228  Identities=17%  Similarity=0.268  Sum_probs=168.0

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccc--cHHHHHHHHHHHhhcCC--CCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHH--SSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|... ++.||+|++......  ..+.+.+|+.+|++++|  ||||++++++.+.+.+++||||. 
T Consensus        13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-   91 (343)
T 3dbq_A           13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-   91 (343)
T ss_dssp             EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred             EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCC-
Confidence            3577999999999999885 678999987654332  35778999999999976  99999999999999999999965 


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..++                 +||+|+|||+++     ..+||+|||+++.+...  ....
T Consensus        92 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~-----~~~kl~DFG~a~~~~~~--~~~~  164 (343)
T 3dbq_A           92 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQMQPD--TTSV  164 (343)
T ss_dssp             SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-----TEEEECCCSSSCCC---------
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEEC-----CcEEEeecccccccCcc--cccc
Confidence            89999999887666644433332                 356699999964     45999999999875321  1112


Q ss_pred             cccccCCCccccchhhhcC-----------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          234 KVNKIEGTRGYMAPEFQAS-----------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      .....+||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....          ....     
T Consensus       165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----------~~~~-----  229 (343)
T 3dbq_A          165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----------QISK-----  229 (343)
T ss_dssp             -----CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS----------HHHH-----
T ss_pred             cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh----------HHHH-----
Confidence            2345679999999999864           6789999999999999999999999963221          1111     


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            +...+++.....++...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       230 ------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          230 ------LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             ------HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ------HHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence                  11222223333344444568999999999999999999999975

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.9e-37  Score=284.01  Aligned_cols=258  Identities=16%  Similarity=0.158  Sum_probs=187.3

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|.+  .++.||+|+.....  ..+.+.+|+.+++++ +|+||+++++++.+....++||||+ +|
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~   90 (298)
T 1csn_A           14 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP   90 (298)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CC
Confidence            356799999999999996  48899999864332  345688999999999 8999999999999999999999999 99


Q ss_pred             CHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccC-CCccceEEcccccccccccCCCCcc-
Q 016850          173 NLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEEN-AGSLCAKICHFGTAELCGEVSGNES-  232 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~-~~~~~~kl~DFG~a~~~~~~~~~~~-  232 (381)
                      +|.+++.... ..+...+..++                 ++|+|+||+++.++ .....+||+|||+++.......... 
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~  170 (298)
T 1csn_A           91 SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI  170 (298)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC
T ss_pred             CHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccc
Confidence            9999998643 34444433332                 25669999997754 2335599999999987643221111 


Q ss_pred             --ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          233 --GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       233 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                        .......||+.|+|||++.+..++.++|||||||++|||++|+.||........     ............       
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~-------  238 (298)
T 1csn_A          171 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-----KQKYERIGEKKQ-------  238 (298)
T ss_dssp             CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-----HHHHHHHHHHHH-------
T ss_pred             cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-----HHHHHHHHhhcc-------
Confidence              123456799999999999998999999999999999999999999975332110     111111110000       


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCccee
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFS  375 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~  375 (381)
                      ....+..    ...+++.+.+|+.+||+.||.+||++.+|++.|++++.+..   ...+.+.||+
T Consensus       239 ~~~~~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~---~~~~~~~dw~  296 (298)
T 1csn_A          239 STPLREL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN---TTEDENFDWN  296 (298)
T ss_dssp             HSCHHHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT---CCSCSCCGGG
T ss_pred             CccHHHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC---CCCCCccccC
Confidence            0000000    11345789999999999999999999999999999987533   2334555554

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.1e-37  Score=301.06  Aligned_cols=174  Identities=20%  Similarity=0.282  Sum_probs=126.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe-----CCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS-----GNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|++.  ++.||||++.....  ...+++.+|+++|++|+|||||++++++..     .+.+|+||
T Consensus        57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~  136 (458)
T 3rp9_A           57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL  136 (458)
T ss_dssp             ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred             EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence            4678999999999999885  78899998754322  246778999999999999999999999853     35789999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+ +|+|.+++.....+....+..++                 +||||+|||++.+    +.+||+|||+++.......
T Consensus       137 e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~----~~~kl~DFGla~~~~~~~~  211 (458)
T 3rp9_A          137 EIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD----CSVKVCDFGLARTVDYPEN  211 (458)
T ss_dssp             CCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----CCEEECCCTTCBCTTSCTT
T ss_pred             ecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCC----CCEeecccccchhccCccc
Confidence            999 58999999887766655443332                 3567999999887    5699999999987642211


Q ss_pred             Cc-----------------------cccccccCCCccccchhhh-cCCCCCcchhHHHHHHHHHHHHhC
Q 016850          230 NE-----------------------SGKVNKIEGTRGYMAPEFQ-ASGVVTQKCDVYAFGVVVLELLSG  274 (381)
Q Consensus       230 ~~-----------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDIwSlGvil~elltg  274 (381)
                      ..                       .......+||+.|+|||++ .+..|+.++|||||||++|||++|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            10                       0123556899999999976 456799999999999999999993

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.4e-37  Score=282.41  Aligned_cols=234  Identities=21%  Similarity=0.367  Sum_probs=177.8

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|.+. ++.||+|+.... ....+.+.+|+++|++++||||+++++++.+ +..++||||+++|+|.
T Consensus        18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~   95 (279)
T 1qpc_A           18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLV   95 (279)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHH
T ss_pred             eeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCCCCCHH
Confidence            567999999999999987 457888886543 3357889999999999999999999999864 5589999999999999


Q ss_pred             HHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  ......+..++                 .+|+|+||+++++    +.+||+|||++.....   .......
T Consensus        96 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~----~~~kl~Dfg~~~~~~~---~~~~~~~  168 (279)
T 1qpc_A           96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT----LSCKIADFGLARLIED---NEYTARE  168 (279)
T ss_dssp             HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----SCEEECCCTTCEECSS---SCEECCT
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCC----CCEEECCCcccccccC---ccccccc
Confidence            9998643  34433333222                 2456899999876    5699999999987532   1222233


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+++.|+|||++.+..++.++||||||+++|||++ |+.||......        ....    .           +..
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~----~-----------~~~  225 (279)
T 1qpc_A          169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--------EVIQ----N-----------LER  225 (279)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--------HHHH----H-----------HHT
T ss_pred             CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--------HHHH----H-----------Hhc
Confidence            4567889999999988889999999999999999999 99998642210        1111    1           111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ......+..+++.+.+|+.+||+.||++|||+.++++.|++++....
T Consensus       226 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence            11222334556789999999999999999999999999999987643

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4.7e-38  Score=310.04  Aligned_cols=243  Identities=16%  Similarity=0.174  Sum_probs=184.0

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|++.  ++.||+|++....   ......+.+|+++|++++|||||++++++.+.+.+|||||||++
T Consensus       189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g  268 (576)
T 2acx_A          189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG  268 (576)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence            467899999999999985  8899999875432   23467789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCC--CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRNPRN--PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~~~~--~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |+|.+++.....  .++..+..+                 |+||+|+|||++.+    +.+||+|||+++.+..     .
T Consensus       269 g~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~----g~vKL~DFGla~~~~~-----~  339 (576)
T 2acx_A          269 GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDH----GHIRISDLGLAVHVPE-----G  339 (576)
T ss_dssp             CBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----SCEEECCCTTCEECCT-----T
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCC----CCeEEEecccceeccc-----C
Confidence            999999987543  444333322                 23567999999876    5699999999987532     1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........        .......+.         
T Consensus       340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--------~~~i~~~i~---------  402 (576)
T 2acx_A          340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--------REEVERLVK---------  402 (576)
T ss_dssp             CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--------HHHHHHHHH---------
T ss_pred             ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--------HHHHHHHhh---------
Confidence            223456899999999999998999999999999999999999999974322110        011111110         


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH--HHHHHHHHHHHHhhhhhhhc
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR--QVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~--evl~~L~~~~~~~~~~~~~~  368 (381)
                         .....++..+++.+.+||.+||+.||.+||++.  .+.+.+++-+.+..+|..+.
T Consensus       403 ---~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~  457 (576)
T 2acx_A          403 ---EVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLG  457 (576)
T ss_dssp             ---HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHH
T ss_pred             ---cccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHh
Confidence               112233455678899999999999999999432  33444566677777887664

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=6.3e-38  Score=292.85  Aligned_cols=240  Identities=18%  Similarity=0.237  Sum_probs=175.8

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhh--cCCCCcceEEEEEEeCC----eeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICR--SHHSSLIKLLGACVSGN----CGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~----~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.++.||+|++...   ....+.+|++++..  ++||||+++++++...+    .+++||||+
T Consensus        46 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~  122 (342)
T 1b6c_B           46 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH  122 (342)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred             EEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence            5678999999999999999999999987532   34678889999988  79999999999998775    789999999


Q ss_pred             CCCCHHHHhcCCCCCCccchH-------------------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          170 SGANLADCLRNPRNPSFTVLS-------------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~-------------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      ++|+|.+++.... .....+.                         .+|++|+|+||+++.+    +.+||+|||+++..
T Consensus       123 ~~g~L~~~l~~~~-~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~~~~~  197 (342)
T 1b6c_B          123 EHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN----GTCCIADLGLAVRH  197 (342)
T ss_dssp             TTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTT----SCEEECCCTTCEEE
T ss_pred             CCCcHHHHHhccC-ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCC----CCEEEEECCCceec
Confidence            9999999997643 2222211                         2233566888888776    56999999999875


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCC------CCCcchhHHHHHHHHHHHHhC----------CccccccccCCccc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASG------VVTQKCDVYAFGVVVLELLSG----------EEVLKFVFDEGIDG  288 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDIwSlGvil~elltg----------~~pf~~~~~~~~~~  288 (381)
                      ...............||+.|+|||++.+.      .++.++|||||||++|||++|          +.||........  
T Consensus       198 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~--  275 (342)
T 1b6c_B          198 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP--  275 (342)
T ss_dssp             ETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC--
T ss_pred             cccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcc--
Confidence            43221111123456799999999998765      344789999999999999999          556543211100  


Q ss_pred             ccchhHHHHHHHHHcCCccchhhhhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                           ........+          ......+..     ...+.+.+.+|+.+||+.||.+|||+.+|++.|+++..+
T Consensus       276 -----~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          276 -----SVEEMRKVV----------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             -----CHHHHHHHH----------TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -----cHHHHHHHH----------HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence                 011111111          111111222     236778899999999999999999999999999999765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=5.5e-38  Score=308.64  Aligned_cols=244  Identities=15%  Similarity=0.215  Sum_probs=183.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|++.  ++.||+|++....   ....+.+.+|+++|++++|||||++++++.+.+.+|+||||+++
T Consensus       190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g  269 (543)
T 3c4z_A          190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG  269 (543)
T ss_dssp             EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred             EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence            356899999999999985  7899999875432   23467789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCC----CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          172 ANLADCLRNPR----NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       172 gsL~~~l~~~~----~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+|.++|....    ...+..+..+                 |+||||+|||++.+    +.+||+|||+++.+..    
T Consensus       270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~----g~vkL~DFGla~~~~~----  341 (543)
T 3c4z_A          270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDD----GNVRISDLGLAVELKA----  341 (543)
T ss_dssp             CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----SCEEECCCTTCEECCT----
T ss_pred             CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCC----CCEEEeecceeeeccC----
Confidence            99999997643    3443333322                 23567999999887    5699999999987532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........+||+.|+|||++.+..++.++|||||||++|||++|+.||.......       .... ....+        
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-------~~~~-~~~~i--------  405 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-------ENKE-LKQRV--------  405 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-------CHHH-HHHHH--------
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-------hHHH-HHHHH--------
Confidence            1122344689999999999999999999999999999999999999997432210       0001 11111        


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH--HHHHHHHHHHHhhhhhhhc
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ--VTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e--vl~~L~~~~~~~~~~~~~~  368 (381)
                        ...  ...++..+++.+.+||.+||+.||.+||++.+  +-+.+++-+.+..+|..+.
T Consensus       406 --~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~  461 (543)
T 3c4z_A          406 --LEQ--AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLE  461 (543)
T ss_dssp             --HHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHH
T ss_pred             --hhc--ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHH
Confidence              111  12234556788999999999999999998753  3444566666777776553

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.6e-37  Score=300.30  Aligned_cols=224  Identities=17%  Similarity=0.225  Sum_probs=176.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  |+.||||++....   ....+.+.+|+++|+.++|||||++++++.+.+.+++|||||+
T Consensus        20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~   99 (476)
T 2y94_A           20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS   99 (476)
T ss_dssp             EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence            4577999999999999985  8899999875432   1245789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..++                 +||+|+|||++.+    +.+||+|||+++....     ..
T Consensus       100 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~----~~vkL~DFG~a~~~~~-----~~  170 (476)
T 2y94_A          100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAH----MNAKIADFGLSNMMSD-----GE  170 (476)
T ss_dssp             SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTT----CCEEECCCSSCEECCT-----TC
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecC----CCeEEEeccchhhccc-----cc
Confidence            99999999887666655444333                 2566999999876    5699999999987532     12


Q ss_pred             cccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.....           .........         
T Consensus       171 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----------~~~~~~i~~---------  230 (476)
T 2y94_A          171 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----------PTLFKKICD---------  230 (476)
T ss_dssp             CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----------HHHHHHHHT---------
T ss_pred             cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----------HHHHHHHhc---------
Confidence            2345689999999999988765 7899999999999999999999964211           111111111         


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ..  ...+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       231 --~~--~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          231 --GI--FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             --TC--CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --CC--cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence              11  1123345678999999999999999999999976

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.5e-38  Score=292.23  Aligned_cols=235  Identities=20%  Similarity=0.266  Sum_probs=175.9

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.       ++.||+|+....... ....+.+|++++++++||||+++++++.+.+..++|||
T Consensus        29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  108 (322)
T 1p4o_A           29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME  108 (322)
T ss_dssp             EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEE
Confidence            3567999999999999865       467888886543322 45678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC----------CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccccc
Q 016850          168 HVSGANLADCLRNPR----------NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~----------~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      |+++|+|.+++....          ......+..+                 |++|+|+||+++.+    +.+||+|||+
T Consensus       109 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~----~~~kl~Dfg~  184 (322)
T 1p4o_A          109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----FTVKIGDFGM  184 (322)
T ss_dssp             CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT----CCEEECCTTC
T ss_pred             eCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCC----CeEEECcCcc
Confidence            999999999997521          2232222222                 23566999999876    5699999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++.....  ..........||+.|+|||++.+..++.++|||||||++|||++ |+.||.....           .+...
T Consensus       185 ~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----------~~~~~  251 (322)
T 1p4o_A          185 TRDIYET--DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----------EQVLR  251 (322)
T ss_dssp             CCGGGGG--GCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----------HHHHH
T ss_pred             ccccccc--cccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----------HHHHH
Confidence            9865321  11122234567899999999988889999999999999999999 8899863211           11111


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      ...            .......+..+++.+.+|+.+||+.||.+|||+.|+++.|++++.
T Consensus       252 ~~~------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          252 FVM------------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHH------------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHH------------cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            111            111112234566789999999999999999999999999987643

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=286.86  Aligned_cols=248  Identities=17%  Similarity=0.224  Sum_probs=180.8

Q ss_pred             ccccccCCCceEEEEEE------CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC--eeeEEEec
Q 016850           97 AKKFTSSSASASWRGTI------RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN--CGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~------~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lv~e~  168 (381)
                      .+.||+|+||.||+|++      .++.||+|+.........+.+.+|+++|++++||||+++++++...+  .+++||||
T Consensus        46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~  125 (326)
T 2w1i_A           46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY  125 (326)
T ss_dssp             EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred             eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence            56799999999999985      37889999876655556778999999999999999999999987644  78999999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +++|+|.+++.... ......+..++                 ++|+|+||+++.+    +.+||+|||++....... .
T Consensus       126 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~----~~~kL~Dfg~~~~~~~~~-~  200 (326)
T 2w1i_A          126 LPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENE----NRVKIGDFGLTKVLPQDK-E  200 (326)
T ss_dssp             CTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET----TEEEECCCTTCEECCSSC-S
T ss_pred             CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCC----CcEEEecCcchhhccccc-c
Confidence            99999999998653 34433333222                 2566999999876    569999999998754311 1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCc----ccccchhHHHHHHHHHcCCc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI----DGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  306 (381)
                      .........++..|+|||++.+..++.++|||||||++|||++|..||........    ...........         
T Consensus       201 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  271 (326)
T 2w1i_A          201 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH---------  271 (326)
T ss_dssp             EEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH---------
T ss_pred             ccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH---------
Confidence            11122345678899999999888899999999999999999999999863211000    00000000000         


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                        +...+........+..+++.+.+||.+||+.||.+||++.+|++.|+.+..+
T Consensus       272 --~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          272 --LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             --HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --HHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence              1111222222333455678899999999999999999999999999998765

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.8e-37  Score=280.01  Aligned_cols=226  Identities=16%  Similarity=0.190  Sum_probs=173.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.  +..+|+|+.........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (277)
T 3f3z_A           13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE   92 (277)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence            4567999999999999986  56789998766656678899999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++..........+..++.                 +|+|+||++..++ .+..+||+|||++..+..     .....
T Consensus        93 L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~~~~l~Dfg~~~~~~~-----~~~~~  166 (277)
T 3f3z_A           93 LFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDS-PDSPLKLIDFGLAARFKP-----GKMMR  166 (277)
T ss_dssp             HHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS-TTCCEEECCCTTCEECCT-----TSCBC
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCC-CCCcEEEEecccceeccC-----ccchh
Confidence            999998766666554443332                 4569999983211 125699999999976532     12334


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|+|||++.+ .++.++||||||+++|+|++|+.||.....           .+.......+           .
T Consensus       167 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~~~-----------~  223 (277)
T 3f3z_A          167 TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD-----------SEVMLKIREG-----------T  223 (277)
T ss_dssp             CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHC-----------C
T ss_pred             ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHhC-----------C
Confidence            5679999999998865 489999999999999999999999964221           1111111110           0


Q ss_pred             ccCCCCH----HHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPV----EVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ...+.    .+++.+.+|+.+||+.||.+||++.++++
T Consensus       224 --~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          224 --FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             --CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             --CCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              11121    34678999999999999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.9e-38  Score=292.94  Aligned_cols=221  Identities=16%  Similarity=0.181  Sum_probs=161.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||||+.......  ...+..+|+..+.++ +|||||+++++|.+++.+++||||+ 
T Consensus        61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-  139 (311)
T 3p1a_A           61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-  139 (311)
T ss_dssp             EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred             eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence            4567999999999999995  789999986543322  344556666666665 9999999999999999999999999 


Q ss_pred             CCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... ..++..+..++                 +||||+|||++.+    +.+||+|||++.....     .
T Consensus       140 ~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~----~~~kl~DFG~a~~~~~-----~  210 (311)
T 3p1a_A          140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR----GRCKLGDFGLLVELGT-----A  210 (311)
T ss_dssp             CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGG----GCEEECCCTTCEECC-------
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCC----CCEEEccceeeeeccc-----C
Confidence            789999987643 34444433322                 2567999999876    5699999999976532     1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......||+.|+|||++.+ .++.++|||||||++|||++|..|+....           ..    ..+          
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-----------~~----~~~----------  264 (311)
T 3p1a_A          211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-----------GW----QQL----------  264 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----------HH----HHH----------
T ss_pred             CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-----------HH----HHH----------
Confidence            22345669999999998875 78999999999999999999976653210           00    001          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........++..+++.+.+|+.+||+.||++|||+.|+++
T Consensus       265 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          265 RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             TTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            0000111112234578999999999999999999999975

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.3e-37  Score=296.94  Aligned_cols=228  Identities=14%  Similarity=0.209  Sum_probs=162.4

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe----CCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVS----GNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~~~~~lv~e~~~  170 (381)
                      +.||+|+||+||+|.+.  ++.||||++..     ...+.+|++++.++ +|||||++++++..    .+.+|||||||+
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~  142 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD  142 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence            57999999999999985  77899998642     25678899988554 89999999999876    667899999999


Q ss_pred             CCCHHHHhcCCCC--CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPRN--PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~~--~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|+|.++|.....  +.+..+..++                 +||+|+|||++..+ .++.+||+|||+++....     
T Consensus       143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-~~~~~kl~DFG~a~~~~~-----  216 (400)
T 1nxk_A          143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS-----  216 (400)
T ss_dssp             SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS-TTCCEEECCCTTCEECC------
T ss_pred             CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC-CCccEEEEecccccccCC-----
Confidence            9999999987543  4433333322                 35679999998732 126799999999986432     


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..........    .....+   ..+       
T Consensus       217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~----~~~~~i---~~~-------  282 (400)
T 1nxk_A          217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP----GMKTRI---RMG-------  282 (400)
T ss_dssp             ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC----SHHHHH---HHT-------
T ss_pred             CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH----HHHHHH---HcC-------
Confidence            123346789999999999998999999999999999999999999997543221110    000100   000       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ...........+++++.+||.+||+.||.+|||+.|+++
T Consensus       283 --~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          283 --QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             --CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --cccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              000111112346778999999999999999999999976

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=3.3e-37  Score=284.61  Aligned_cols=236  Identities=18%  Similarity=0.278  Sum_probs=167.3

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC-----eeeE
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGN-----CGYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~~l  164 (381)
                      .+.||+|+||.||+|.+.     +..||+|+.......  ..+.+.+|+.++++++||||+++++++.+.+     ..++
T Consensus        39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~  118 (313)
T 3brb_A           39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV  118 (313)
T ss_dssp             EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred             ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence            467899999999999874     237899887544322  4567899999999999999999999998654     3599


Q ss_pred             EEeccCCCCHHHHhcC------CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccc
Q 016850          165 VYEHVSGANLADCLRN------PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTA  221 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~------~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a  221 (381)
                      ||||+++|+|.+++..      ....+...+..++                 ++|+|+||+++.+    +.+||+|||++
T Consensus       119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~----~~~kl~Dfg~~  194 (313)
T 3brb_A          119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD----MTVCVADFGLS  194 (313)
T ss_dssp             EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTT----SCEEECSCSCC
T ss_pred             EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCC----CcEEEeecCcc
Confidence            9999999999999842      2334433333322                 2556999999886    56999999999


Q ss_pred             cccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHH
Q 016850          222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      +.+...  ..........+++.|+|||++.+..++.++||||||+++|+|++ |..||......        ....    
T Consensus       195 ~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~~~----  260 (313)
T 3brb_A          195 KKIYSG--DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--------EMYD----  260 (313)
T ss_dssp             ------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--------GHHH----
T ss_pred             eecccc--cccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--------HHHH----
Confidence            865321  11122334567889999999998899999999999999999999 88998643221        1111    


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                                 .+........+..+++.+.+|+.+||+.||.+||++.++++.|++++.+.
T Consensus       261 -----------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          261 -----------YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             -----------HHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -----------HHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence                       11111122334456678999999999999999999999999999998753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=7.2e-38  Score=290.94  Aligned_cols=241  Identities=18%  Similarity=0.230  Sum_probs=176.2

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.       +..||+|++..... ....++.+|+.++++++||||+++++++.+.+..++|||
T Consensus        34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  113 (327)
T 2yfx_A           34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME  113 (327)
T ss_dssp             EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence            3577999999999999842       56799998753322 245678999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC-------CCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccc
Q 016850          168 HVSGANLADCLRNPRN-------PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~-------~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      |+++|+|.+++.....       .....+..+                 |++|+|+||+++..+ .+..+||+|||+++.
T Consensus       114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~-~~~~~kl~Dfg~~~~  192 (327)
T 2yfx_A          114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARD  192 (327)
T ss_dssp             CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS-TTCCEEECCCHHHHH
T ss_pred             cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC-CcceEEECccccccc
Confidence            9999999999986532       222222222                 225679999998532 125699999999976


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHH
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                      ....  ..........||+.|+|||++.+..++.++|||||||++|+|++ |+.||......        ....   .  
T Consensus       193 ~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~---~--  257 (327)
T 2yfx_A          193 IYRA--SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--------EVLE---F--  257 (327)
T ss_dssp             HHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHH---H--
T ss_pred             cccc--cccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--------HHHH---H--
Confidence            4321  11122334568999999999988899999999999999999998 99998642210        1111   1  


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                                +........+..+++.+.+|+.+||+.||.+||++.++++.|+.+.....
T Consensus       258 ----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          258 ----------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             ----------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             ----------HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence                      11111222334556789999999999999999999999999998866543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=3.9e-37  Score=284.07  Aligned_cols=239  Identities=17%  Similarity=0.259  Sum_probs=169.1

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|++. ++.||+|++......  ....+.+|+++|++++|||||++++++.+.+.+++|||||+ |+
T Consensus        26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~  104 (311)
T 3niz_A           26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD  104 (311)
T ss_dssp             EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred             hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence            567999999999999985 788999987544322  35678899999999999999999999999999999999996 68


Q ss_pred             HHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... ......+..++                 +||+|+|||++.+    +.+||+|||+++....    .....
T Consensus       105 l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~----~~~kl~Dfg~a~~~~~----~~~~~  176 (311)
T 3niz_A          105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD----GALKLADFGLARAFGI----PVRSY  176 (311)
T ss_dssp             HHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEETTS----CCC--
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCC----CCEEEccCcCceecCC----Ccccc
Confidence            988887654 34444333322                 2556999999877    5699999999987532    12233


Q ss_pred             cccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-c------
Q 016850          236 NKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-G------  307 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------  307 (381)
                      ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......        ............. .      
T Consensus       177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~  248 (311)
T 3niz_A          177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--------QLPKIFSILGTPNPREWPQVQ  248 (311)
T ss_dssp             -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--------HHHHHHHHHCCCCTTTSGGGT
T ss_pred             cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHHCCCChHHhhhhh
Confidence            45678999999999876 568999999999999999999999997543321        1111111111000 0      


Q ss_pred             chhhhhccccc--CC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 GVRKWVDRRLK--DS-----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ~~~~~~~~~~~--~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+..+......  ..     ....+++++.+|+.+||+.||.+|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            00001110000  00     01234568999999999999999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-37  Score=284.93  Aligned_cols=226  Identities=17%  Similarity=0.198  Sum_probs=164.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--------------------------cHHHHHHHHHHHhhcCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--------------------------DLEQLRERLSVICRSHHS  147 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--------------------------~~~~~~~E~~il~~l~h~  147 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+.......                          ..+.+.+|+++|++++||
T Consensus        17 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   96 (298)
T 2zv2_A           17 LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHP   96 (298)
T ss_dssp             EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCT
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCC
Confidence            3577999999999999984  788999987543211                          235688999999999999


Q ss_pred             CcceEEEEEEe--CCeeeEEEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCC
Q 016850          148 SLIKLLGACVS--GNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENA  208 (381)
Q Consensus       148 nIv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~  208 (381)
                      |||++++++.+  .+.+++||||+++|+|.+++... ..+...+..++                 +||+|+||+++.+  
T Consensus        97 ~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~--  173 (298)
T 2zv2_A           97 NVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGED--  173 (298)
T ss_dssp             TBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT--
T ss_pred             CCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCC--
Confidence            99999999986  67899999999999999876543 34433333222                 2566999999876  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCC---CCcchhHHHHHHHHHHHHhCCccccccccCC
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGV---VTQKCDVYAFGVVVLELLSGEEVLKFVFDEG  285 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDIwSlGvil~elltg~~pf~~~~~~~  285 (381)
                        +.+||+|||+++.+..    .........||+.|+|||++.+..   ++.++|||||||++|||++|+.||.....  
T Consensus       174 --~~~kl~Dfg~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--  245 (298)
T 2zv2_A          174 --GHIKIADFGVSNEFKG----SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--  245 (298)
T ss_dssp             --SCEEECCCTTCEECSS----SSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred             --CCEEEecCCCcccccc----ccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence              5699999999987532    122234567999999999987654   47889999999999999999999963211  


Q ss_pred             cccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                               ........           ...........+++.+.+|+.+||+.||++||++.|+++
T Consensus       246 ---------~~~~~~~~-----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          246 ---------MCLHSKIK-----------SQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             ---------HHHHHHHH-----------HCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ---------HHHHHHHh-----------cccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence                     11111111           011111112245678999999999999999999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.1e-37  Score=286.29  Aligned_cols=243  Identities=15%  Similarity=0.192  Sum_probs=171.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|...  ++.||||++........+.+.+|+++|.++ +||||+++++++.+.+.+++||||+++|+
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   97 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS   97 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence            357999999999999874  889999998766555678899999999995 79999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC---ccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN---ESG  233 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~---~~~  233 (381)
                      |.+++......+...+..++                 ++|+|+||+++.++. ...+||+|||++.........   ...
T Consensus        98 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~~  176 (316)
T 2ac3_A           98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ-VSPVKICDFDLGSGIKLNGDCSPISTP  176 (316)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSS-SCSEEECCTTCCC--------------
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCC-cCceEEEEccCccccccCCcccccccc
Confidence            99999876656544443332                 245689999887531 134899999999765321110   111


Q ss_pred             cccccCCCccccchhhhcC-----CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch---hHHHHHHHHHcCC
Q 016850          234 KVNKIEGTRGYMAPEFQAS-----GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV---SVVDKASEAVAGG  305 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~-----~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~  305 (381)
                      .....+||+.|+|||++.+     ..++.++|||||||++|||++|+.||..............   .........+.  
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~--  254 (316)
T 2ac3_A          177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQ--  254 (316)
T ss_dssp             -----CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHH--
T ss_pred             ccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHh--
Confidence            2234569999999999875     5589999999999999999999999975433221110000   00011111110  


Q ss_pred             ccchhhhhcccccCCCCH----HHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPV----EVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ...  ..++.    .+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       255 --------~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          255 --------EGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             --------HCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --------ccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence                    000  11221    24678999999999999999999999965

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=8.9e-38  Score=285.29  Aligned_cols=237  Identities=19%  Similarity=0.341  Sum_probs=165.0

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|++.+ .+|+|+++.....  ..+.+.+|+++|++++||||+++++++ ..+..++||||+++++
T Consensus        28 ~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~  105 (289)
T 3og7_A           28 VGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS  105 (289)
T ss_dssp             EEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred             eeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence            35789999999999998765 5899987654433  457799999999999999999999965 5566899999999999


Q ss_pred             HHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... ......+..++                 ++|+|+||+++.+    +.+||+|||+++.....  ......
T Consensus       106 L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~~--~~~~~~  179 (289)
T 3og7_A          106 LYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED----NTVKIGDFGLATEKSRW--SGSHQF  179 (289)
T ss_dssp             HHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT----TEEEECCCC----------------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC----CCEEEccceeccccccc--cccccc
Confidence            999996543 34433333222                 2566999999876    56999999999764321  112233


Q ss_pred             cccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          236 NKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ....||+.|+|||++.   +..++.++||||||+++|+|++|+.||......       ...........          
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~----------  242 (289)
T 3og7_A          180 EQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-------DQIIEMVGRGS----------  242 (289)
T ss_dssp             ----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-------HHHHHHHHHTS----------
T ss_pred             cccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-------HHHHHHhcccc----------
Confidence            4567999999999986   567889999999999999999999999643211       01111110000          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ..+. .......+++.+.+|+.+||+.||.+||++.++++.|+++.
T Consensus       243 ~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          243 LSPD-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             CCCC-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cCcc-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            0011 11122345678999999999999999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=4.7e-37  Score=284.78  Aligned_cols=232  Identities=18%  Similarity=0.206  Sum_probs=176.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+.......      ..+.+.+|+.+|++++||||+++++++.+.+.+++|||
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   95 (321)
T 2a2a_A           16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE   95 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence            4678999999999999985  788999987654322      36789999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+++|+|.+++......+...+..++                 ++|+|+||+++.++.....+||+|||++.....    
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~----  171 (321)
T 2a2a_A           96 LVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED----  171 (321)
T ss_dssp             CCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCT----
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCc----
Confidence            99999999999876655544433332                 245699999987653223699999999987532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.....           .+........ ...+ 
T Consensus       172 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~i~~~-~~~~-  237 (321)
T 2a2a_A          172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----------QETLANITSV-SYDF-  237 (321)
T ss_dssp             -TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----------HHHHHHHHTT-CCCC-
T ss_pred             -cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHHhc-cccc-
Confidence             1123456799999999999988999999999999999999999999963211           1111111100 0000 


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         +..    .+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       238 ---~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          238 ---DEE----FFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             ---CHH----HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             ---Chh----hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               000    01124567999999999999999999999975

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=8.1e-38  Score=302.87  Aligned_cols=237  Identities=16%  Similarity=0.177  Sum_probs=171.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  ++.||+|++....   ......+.+|+.+|+.++|||||++++++.+.+.+|||||||+
T Consensus       152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~  231 (446)
T 4ejn_A          152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN  231 (446)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred             EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence            3567999999999999985  7899999875432   2245667889999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPRNPSFTVLST------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.....+....+..                  +|+||+|+|||++.+    +.+||+|||+++....    ..
T Consensus       232 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~----~~~kl~DFG~a~~~~~----~~  303 (446)
T 4ejn_A          232 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD----GHIKITDFGLCKEGIK----DG  303 (446)
T ss_dssp             SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSS----SCEEECCCCCCCTTCC------
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCC----CCEEEccCCCceeccC----CC
Confidence            999999998766555443322                  223566889998876    5699999999975321    22


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......        ....   ...          
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~---~i~----------  362 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFE---LIL----------  362 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH---HHH----------
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHH---HHH----------
Confidence            2345678999999999999999999999999999999999999999642210        1111   111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                       ..  ...++..+++.+.+||.+||+.||.+||     ++.|++   ++-+.+..+|...
T Consensus       363 -~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell---~hp~f~~~~~~~~  416 (446)
T 4ejn_A          363 -ME--EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIM---QHRFFAGIVWQHV  416 (446)
T ss_dssp             -HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHH---TSGGGTTCCHHHH
T ss_pred             -hC--CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHH---hCccccCCCHHHH
Confidence             11  1123445677899999999999999999     888774   4555666667654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=5e-38  Score=310.67  Aligned_cols=230  Identities=25%  Similarity=0.379  Sum_probs=176.4

Q ss_pred             cccccCCCceEEEEEECC-ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHHH
Q 016850           98 KKFTSSSASASWRGTIRG-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD  176 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~  176 (381)
                      +.||+|+||.||+|.+.+ ..||||+++... ...+.+.+|+++|++|+|||||++++++.+ +.++||||||++|+|.+
T Consensus       273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~  350 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLD  350 (535)
T ss_dssp             EEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHH
T ss_pred             eecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHH
Confidence            458999999999999974 678898875433 356789999999999999999999999876 67899999999999999


Q ss_pred             HhcCC--CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          177 CLRNP--RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       177 ~l~~~--~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +|...  .......+..+                 |+||+|+|||++++    +.+||+|||+++.+..   ........
T Consensus       351 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFG~a~~~~~---~~~~~~~~  423 (535)
T 2h8h_A          351 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIED---NEYTARQG  423 (535)
T ss_dssp             HHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEECCTTSTTTCCC---HHHHTTCS
T ss_pred             HHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCC----CcEEEcccccceecCC---CceecccC
Confidence            99753  23443333222                 23567999999876    5699999999986532   11112234


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..++..|+|||++.+..++.++|||||||++|||++ |+.||......        .+..               .+...
T Consensus       424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--------~~~~---------------~i~~~  480 (535)
T 2h8h_A          424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLD---------------QVERG  480 (535)
T ss_dssp             TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--------HHHH---------------HHHTT
T ss_pred             CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHH---------------HHHcC
Confidence            557889999999988899999999999999999999 99998643210        1111               11112


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      .....+..+++.+.+||.+||+.||++|||+.+|++.|++++.
T Consensus       481 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          481 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            2223345567789999999999999999999999999998764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.8e-37  Score=289.34  Aligned_cols=218  Identities=18%  Similarity=0.279  Sum_probs=172.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......        ..+.+.+|+++|++++|||||++++++.+.+.+++|
T Consensus        28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv  107 (335)
T 3dls_A           28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV  107 (335)
T ss_dssp             EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEE
Confidence            4567999999999999874  788999987654321        334678899999999999999999999999999999


Q ss_pred             EeccCCC-CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccC
Q 016850          166 YEHVSGA-NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       166 ~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |||+.+| +|.+++..........+..++.                 ||+|+|||++.+    +.+||+|||+++.... 
T Consensus       108 ~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~----~~~kL~Dfg~a~~~~~-  182 (335)
T 3dls_A          108 MEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED----FTIKLIDFGSAAYLER-  182 (335)
T ss_dssp             EECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----SCEEECCCTTCEECCT-
T ss_pred             EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCC----CcEEEeecccceECCC-
Confidence            9999777 9999999877766555443332                 566999999876    5699999999987532 


Q ss_pred             CCCccccccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                          ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||......                      
T Consensus       183 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----------------------  236 (335)
T 3dls_A          183 ----GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET----------------------  236 (335)
T ss_dssp             ----TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------------
T ss_pred             ----CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------------
Confidence                122345679999999999988776 88999999999999999999999632110                      


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .....  ..+..+++.+.+|+.+||+.||++|||+.++++
T Consensus       237 ------~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          237 ------VEAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             ------TTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------Hhhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  00001  112235678999999999999999999999976

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=5.2e-37  Score=282.88  Aligned_cols=240  Identities=15%  Similarity=0.225  Sum_probs=169.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|...  ++.||+|++.....   ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  115 (310)
T 2wqm_A           36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD  115 (310)
T ss_dssp             EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCC
Confidence            3577999999999999974  88999998765332   245678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcC----CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          171 GANLADCLRN----PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       171 ~gsL~~~l~~----~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|+|.+++..    ....+...+..++                 .+|+|+||+++.+    +.+||+|||++.....   
T Consensus       116 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~----~~~kl~Dfg~~~~~~~---  188 (310)
T 2wqm_A          116 AGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT----GVVKLGDLGLGRFFSS---  188 (310)
T ss_dssp             SCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEECCC-----------
T ss_pred             CCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCC----CCEEEEeccceeeecC---
Confidence            9999999864    2334433333222                 2456999999876    5699999999976532   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                       .........|++.|+|||++.+..++.++||||||+++|+|++|+.||.....         ..........       
T Consensus       189 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---------~~~~~~~~~~-------  251 (310)
T 2wqm_A          189 -KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---------NLYSLCKKIE-------  251 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---------CHHHHHHHHH-------
T ss_pred             -CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---------hHHHHHHHhh-------
Confidence             11223345799999999999988999999999999999999999999863211         0111111110       


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN  363 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~  363 (381)
                          ...........+++.+.+|+.+||+.||.+||++.+|++.|+++....+.
T Consensus       252 ----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          252 ----QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             ----TTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             ----cccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence                01111111234567899999999999999999999999999999877553

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=3.5e-38  Score=293.95  Aligned_cols=251  Identities=14%  Similarity=0.126  Sum_probs=169.3

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHH--HhhcCCCCcceEEEEEEe-----CCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSV--ICRSHHSSLIKLLGACVS-----GNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~i--l~~l~h~nIv~l~~~~~~-----~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|++.++.||||++....   ...+..|.++  +..++||||+++++++..     ...+++||||
T Consensus        17 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~   93 (336)
T 3g2f_A           17 LLELIGRGRYGAVYKGSLDERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY   93 (336)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred             eeeecccCCCeEEEEEEECCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence            35679999999999999999999999975432   3445555555  455899999999986653     3367899999


Q ss_pred             cCCCCHHHHhcCCCCCCccc-------h-------------------HHHHHHhhhcceeecccCCCccceEEccccccc
Q 016850          169 VSGANLADCLRNPRNPSFTV-------L-------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~-------~-------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      |++|+|.+++..... ....       +                   ..+|+||+|+|||++.+    +.+||+|||+++
T Consensus        94 ~~~g~L~~~l~~~~~-~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~----~~~kL~DFG~a~  168 (336)
T 3g2f_A           94 YPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND----GTCVISDFGLSM  168 (336)
T ss_dssp             CTTCBHHHHHHHCCB-CHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT----SCEEECCCTTCE
T ss_pred             CCCCcHHHHHhhccc-chhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC----CcEEEeecccee
Confidence            999999999976543 2211       1                   22344567888888776    569999999998


Q ss_pred             ccccCCC----CccccccccCCCccccchhhhcC-------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccc
Q 016850          223 LCGEVSG----NESGKVNKIEGTRGYMAPEFQAS-------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRR  291 (381)
Q Consensus       223 ~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~  291 (381)
                      .+.....    ..........||+.|+|||++.+       ..++.++|||||||++|||++|..||.............
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  248 (336)
T 3g2f_A          169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF  248 (336)
T ss_dssp             ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred             ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence            7543211    11122335679999999999876       456789999999999999999977764322211100000


Q ss_pred             h------hHHHHHHHHHcCCccchhhhhcccccCC--CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          292 V------SVVDKASEAVAGGVGGVRKWVDRRLKDS--YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       292 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .      .............      ...+.+...  ....+++.+.+||.+||+.||.+|||+.|+++.|++++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~  319 (336)
T 3g2f_A          249 QTEVGNHPTFEDMQVLVSRE------KQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI  319 (336)
T ss_dssp             HHHHCSSCCHHHHHHHHTTS------CCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcccCCCchHHHHHhhhccc------ccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence            0      0000001111000      001111111  1235778899999999999999999999999999999753

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.8e-38  Score=287.47  Aligned_cols=233  Identities=18%  Similarity=0.271  Sum_probs=173.2

Q ss_pred             cccccccCCCceEEEEEECC---------ceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIRG---------KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~---------~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|.+..         ..||+|+.........+.+.+|++++++++|||||++++++.+.+..++||
T Consensus        12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   91 (289)
T 4fvq_A           12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ   91 (289)
T ss_dssp             EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred             eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence            35679999999999998752         468999876655566788999999999999999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCC-CCccchHHHH-----------------HHhhhcceeecccCC----CccceEEccccccccc
Q 016850          167 EHVSGANLADCLRNPRN-PSFTVLSTWL-----------------SRMQSSSIIVSEENA----GSLCAKICHFGTAELC  224 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~-~~~~~~~~~~-----------------~~l~~~Nill~~~~~----~~~~~kl~DFG~a~~~  224 (381)
                      ||+++|+|.+++..... .+...+..++                 ++|+|+||+++.++.    ....+||+|||++...
T Consensus        92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~  171 (289)
T 4fvq_A           92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV  171 (289)
T ss_dssp             ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred             ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence            99999999999987543 4433333222                 256699999987642    1112999999998653


Q ss_pred             ccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      .        ......||+.|+|||++.+ ..++.++|||||||++|||++|..|+.....          .... .... 
T Consensus       172 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~-~~~~-  231 (289)
T 4fvq_A          172 L--------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD----------SQRK-LQFY-  231 (289)
T ss_dssp             S--------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC----------HHHH-HHHH-
T ss_pred             c--------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc----------hHHH-HHHh-
Confidence            2        1223558899999999987 6789999999999999999996544421111          0000 0000 


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                                ..  ....+...++.+.+|+.+||+.||.+|||+.++++.|++++..
T Consensus       232 ----------~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          232 ----------ED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             ----------HT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             ----------hc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence                      00  1111222356789999999999999999999999999988763

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=5.1e-37  Score=278.00  Aligned_cols=230  Identities=20%  Similarity=0.281  Sum_probs=175.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|...  ++.||+|+....... ..+.+.+|+.+++.++||||+++++++.+.+..++||||+++|
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   90 (276)
T 2yex_A           11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   90 (276)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCC
Confidence            4578999999999999985  788999987654433 4578999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++......+...+..++.                 +|+|+||+++.+    +.+||+|||++......  ......
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~~--~~~~~~  164 (276)
T 2yex_A           91 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER----DNLKISDFGLATVFRYN--NRERLL  164 (276)
T ss_dssp             EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCTTCEECEET--TEECCB
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccC----CCEEEeeCCCccccCCC--cchhcc
Confidence            9999998776665554433332                 456999999876    55999999999765321  112223


Q ss_pred             cccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.......      .....               +..
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~---------------~~~  223 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------QEYSD---------------WKE  223 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS------HHHHH---------------HHT
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH------HHHHH---------------hhh
Confidence            45679999999999987665 789999999999999999999996432210      00000               000


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          224 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            00011112345678999999999999999999999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.1e-37  Score=285.55  Aligned_cols=236  Identities=14%  Similarity=0.212  Sum_probs=162.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++...... ..+.+.+|+++|++++|||||++++++.+.+.+++||||++ |
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~   87 (317)
T 2pmi_A            9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-N   87 (317)
T ss_dssp             ----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-C
T ss_pred             EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-C
Confidence            3577999999999999885  788999987654432 45778999999999999999999999999999999999997 7


Q ss_pred             CHHHHhcCCC------CCCccchH-------HHH----------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          173 NLADCLRNPR------NPSFTVLS-------TWL----------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       173 sL~~~l~~~~------~~~~~~~~-------~~~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|.+++....      ......+.       ..+          ++|+|+|||++.+    +.+||+|||+++.+...  
T Consensus        88 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~----~~~kl~Dfg~~~~~~~~--  161 (317)
T 2pmi_A           88 DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKR----GQLKLGDFGLARAFGIP--  161 (317)
T ss_dssp             BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCSSCEETTSC--
T ss_pred             CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCC----CCEEECcCccceecCCC--
Confidence            9999986532      23333222       222          2566999999876    56999999999875321  


Q ss_pred             CccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc-
Q 016850          230 NESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG-  307 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  307 (381)
                        ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......        ............... 
T Consensus       162 --~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~  231 (317)
T 2pmi_A          162 --VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--------EQLKLIFDIMGTPNES  231 (317)
T ss_dssp             --CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCSCCTT
T ss_pred             --cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCChh
Confidence              122345679999999999876 46899999999999999999999999643221        111111111110000 


Q ss_pred             ---------------------chhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 ---------------------GVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ---------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                           .+...+.+..    +..++..+.+|+.+||+.||++|||+.|+++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT----KEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TCGGGGGCTTCCTTCCCCCCCCSHHHHGGGC----SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HhhhhhhhhhcccccccccchhHHHhhcccc----cccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                                 0011111111    1134568999999999999999999999865

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=9.3e-37  Score=278.87  Aligned_cols=241  Identities=12%  Similarity=0.099  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||+||+|++.  ++.||+|+.......  ..+.+.+|+.++++++|||||++++++.+++.+++||||++ 
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-   84 (292)
T 3o0g_A            6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-   84 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC-
Confidence            3567999999999999985  788999987654433  35778899999999999999999999999999999999996 


Q ss_pred             CCHHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++.. ........+..++                 ++|+|+||+++.+    +.+||+|||+++....    ...
T Consensus        85 ~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~  156 (292)
T 3o0g_A           85 QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN----GELKLANFGLARAFGI----PVR  156 (292)
T ss_dssp             EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECCS----CCS
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC----CCEEEeecccceecCC----ccc
Confidence            566666544 4455544443332                 2456899999876    5699999999987532    222


Q ss_pred             cccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cchhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGVRK  311 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  311 (381)
                      ......||+.|+|||++.+.. ++.++|||||||++|||++|..||.....       ................ ..+..
T Consensus       157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~-------~~~~~~~i~~~~~~~~~~~~~~  229 (292)
T 3o0g_A          157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND-------VDDQLKRIFRLLGTPTEEQWPS  229 (292)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS-------HHHHHHHHHHHHCCCCTTTCTT
T ss_pred             cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC-------HHHHHHHHHHHhCCCChhhhhh
Confidence            334567899999999987765 79999999999999999998888632111       0111111111111000 00000


Q ss_pred             hhc------------ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVD------------RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +..            ..........+++.+.+|+.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            000            00001112345678999999999999999999999975

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=4.8e-37  Score=279.41  Aligned_cols=231  Identities=18%  Similarity=0.233  Sum_probs=175.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.......  ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   89 (284)
T 3kk8_A           10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG   89 (284)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCC
Confidence            3567999999999999985  788999987554332  456788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++......+...+..++.                 +|+|+||+++.++. +..+||+|||++.....     ...
T Consensus        90 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~-~~~~kl~Dfg~~~~~~~-----~~~  163 (284)
T 3kk8_A           90 GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK-GAAVKLADFGLAIEVND-----SEA  163 (284)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSST-TCCEEECCCTTCEECCS-----SCB
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCC-CCcEEEeeceeeEEccc-----Ccc
Confidence            99999988766665444433322                 45689999976431 24599999999976532     222


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......        .....   ...+.         
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~---~~~~~---------  223 (284)
T 3kk8_A          164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--------RLYAQ---IKAGA---------  223 (284)
T ss_dssp             CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHH---HHHTC---------
T ss_pred             ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--------HHHHH---HHhcc---------
Confidence            34567999999999999999999999999999999999999999632210        11111   11000         


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+|+.+||+.||++|||+.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          224 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            00111112245678999999999999999999999976

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.1e-37  Score=313.44  Aligned_cols=241  Identities=17%  Similarity=0.202  Sum_probs=186.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++.  ++.||||++...   .....+.+.+|..+|..+ +||||+++++++.+.+.+||||||+
T Consensus       345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~  424 (674)
T 3pfq_A          345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV  424 (674)
T ss_dssp             EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECC
T ss_pred             EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCc
Confidence            3567999999999999986  677999987643   223457788999999988 7999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.++|.....+.+..+..++                 +||||+|||++.+    +.+||+|||+++....    ..
T Consensus       425 ~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~----g~ikL~DFGla~~~~~----~~  496 (674)
T 3pfq_A          425 NGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE----GHIKIADFGMCKENIW----DG  496 (674)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSS----SCEEECCCTTCEECCC----TT
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCC----CcEEEeecceeecccc----CC
Confidence            999999999876666655444332                 3567999999877    5699999999986321    12


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.....           .+....+.          
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----------~~~~~~i~----------  555 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----------DELFQSIM----------  555 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH----------
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----------HHHHHHHH----------
Confidence            234567899999999999999999999999999999999999999964221           11111111          


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCCh--HHHHHHHHHHHHHhhhhhhhc
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM--RQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl~~L~~~~~~~~~~~~~~  368 (381)
                       ..  ...+|..+++++.+||.+||+.||.+||++  ..+.+.++.-+.+..+|+.+.
T Consensus       556 -~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~  610 (674)
T 3pfq_A          556 -EH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLE  610 (674)
T ss_dssp             -SS--CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHT
T ss_pred             -hC--CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHH
Confidence             11  123455677899999999999999999998  334455666677777887764

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2e-37  Score=290.18  Aligned_cols=247  Identities=9%  Similarity=0.088  Sum_probs=171.5

Q ss_pred             cccccccCCCceEEEEEEC-----CceEEEEEecccccc-----------cHHHHHHHHHHHhhcCCCCcceEEEEEEe-
Q 016850           96 LAKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRSL-----------DLEQLRERLSVICRSHHSSLIKLLGACVS-  158 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~~-----------~~~~~~~E~~il~~l~h~nIv~l~~~~~~-  158 (381)
                      ..+.||+|+||.||+|.+.     +..+|+|+.......           ....+.+|+.+++.++||||+++++++.+ 
T Consensus        41 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~  120 (345)
T 2v62_A           41 LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTE  120 (345)
T ss_dssp             EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEE
T ss_pred             EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccc
Confidence            3567999999999999984     578889887554321           12346678889999999999999999988 


Q ss_pred             ---CCeeeEEEeccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEccc
Q 016850          159 ---GNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       159 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                         ....|+||||+ +|+|.+++......+...+..++.                 +|+|+|||++.++.  ..+||+||
T Consensus       121 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~--~~~kL~Df  197 (345)
T 2v62_A          121 FKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP--DQVYLADY  197 (345)
T ss_dssp             SSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST--TSEEECCC
T ss_pred             cCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC--CcEEEEeC
Confidence               78899999999 999999998766555554443332                 56699999987642  36999999


Q ss_pred             ccccccccCCCC---ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHH
Q 016850          219 GTAELCGEVSGN---ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       219 G~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |+++.+......   .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......       ...
T Consensus       198 g~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-------~~~  270 (345)
T 2v62_A          198 GLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDP-------VAV  270 (345)
T ss_dssp             TTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCH-------HHH
T ss_pred             CCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccccc-------HHH
Confidence            999876432111   1122345689999999999998889999999999999999999999996322110       111


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ........   ..+...+.....   ...+++.+.+|+.+||+.||.+||++.+|++.|+.+.
T Consensus       271 ~~~~~~~~---~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          271 QTAKTNLL---DELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHH---HTTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHhhc---ccccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            11111100   000010000000   1134568999999999999999999999999998753

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=3e-37  Score=280.67  Aligned_cols=232  Identities=19%  Similarity=0.244  Sum_probs=174.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+.......      ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   88 (283)
T 3bhy_A            9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE   88 (283)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence            4578999999999999996  789999987554321      46889999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |+++++|.+++......+...+..++.                 +|+|+||+++.++..+..+||+|||++.....    
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~----  164 (283)
T 3bhy_A           89 LVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA----  164 (283)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----
T ss_pred             ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC----
Confidence            999999999998765555444443332                 45699999988754445799999999986532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       ........||+.|+|||++.+..++.++||||||+++|+|++|+.||.....           .+......... .   
T Consensus       165 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~-~---  228 (283)
T 3bhy_A          165 -GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----------QETLTNISAVN-Y---  228 (283)
T ss_dssp             --------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHTTC-C---
T ss_pred             -CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----------HHHHHHhHhcc-c---
Confidence             1123446799999999999988999999999999999999999999964221           01111111000 0   


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           .........+++.+.+|+.+||+.||.+||++.++++
T Consensus       229 -----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          229 -----DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             -----CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence                 0000001123567999999999999999999999976

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1.7e-37  Score=292.27  Aligned_cols=246  Identities=16%  Similarity=0.214  Sum_probs=172.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      .+.||+|+||.||+|.+.  +..||+|+....... ..+.+.+|+.+|++++|||||++++++.+++..++||||+++|+
T Consensus        38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  117 (360)
T 3eqc_A           38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS  117 (360)
T ss_dssp             EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence            467999999999999996  788999987654322 45779999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHH------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPRNPSFTVLST------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++..........+..                  +|++|+|+||+++.+    +.+||+|||++.....      ...
T Consensus       118 L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~------~~~  187 (360)
T 3eqc_A          118 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR----GEIKLCDFGVSGQLID------SMA  187 (360)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT----CCEEECCCCCCHHHHH------HC-
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCC----CCEEEEECCCCccccc------ccc
Confidence            999998765555433222                  233567999999877    5599999999976422      123


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHH-------------HHHHH--
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV-------------DKASE--  300 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~-------------~~~~~--  300 (381)
                      ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.................             .....  
T Consensus       188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (360)
T 3eqc_A          188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKF  267 (360)
T ss_dssp             ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------
T ss_pred             cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccc
Confidence            346799999999999999999999999999999999999999964322110000000000             00000  


Q ss_pred             -HHcCCccchhhhh----cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 -AVAGGVGGVRKWV----DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 -~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..........+..    ...........++..+.+||.+||+.||.+|||+.|+++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          268 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence             0000000000111    111111112235678999999999999999999999964

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=4.6e-37  Score=282.54  Aligned_cols=230  Identities=19%  Similarity=0.235  Sum_probs=172.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+.........+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   92 (304)
T 2jam_A           13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE   92 (304)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence            4577999999999999985  88999999876554456778999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++..........+..++.                 +|+|+||++... ..+..+||+|||++.....      ....
T Consensus        93 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~-~~~~~~kl~Dfg~~~~~~~------~~~~  165 (304)
T 2jam_A           93 LFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP-EENSKIMITDFGLSKMEQN------GIMS  165 (304)
T ss_dssp             HHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS-STTCCEEBCSCSTTCCCCC------BTTH
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC-CCCCCEEEccCCcceecCC------Cccc
Confidence            999997766555444433322                 456999998321 1126699999999875321      2234


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|+|||++.+..++.++|||||||++|+|++|+.||.....        ......   ...+.         ..
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~---i~~~~---------~~  225 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--------SKLFEK---IKEGY---------YE  225 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHH---HHHCC---------CC
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHH---HHcCC---------CC
Confidence            45799999999999988999999999999999999999999964221        011111   11000         00


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+..+++.+.+|+.+||+.||.+||++.++++
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111223345678999999999999999999999975

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.5e-37  Score=284.14  Aligned_cols=237  Identities=15%  Similarity=0.137  Sum_probs=170.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.......   ..+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  117 (309)
T 2h34_A           38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLIN  117 (309)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecC
Confidence            4577999999999999985  788999987554332   24778999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++..........+..++.                 +|+|+||+++.+    ..+||+|||++.....   ....
T Consensus       118 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~----~~~kl~Dfg~~~~~~~---~~~~  190 (309)
T 2h34_A          118 GVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSAD----DFAYLVDFGIASATTD---EKLT  190 (309)
T ss_dssp             CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECSCCC-------------
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCC----CCEEEecCccCccccc---cccc
Confidence            999999998766555544433332                 456999999876    5599999999976432   1122


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|++.|+|||++.+..++.++||||||+++|||++|+.||.....         .   .....+.....      
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~---~~~~~~~~~~~------  252 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------S---VMGAHINQAIP------  252 (309)
T ss_dssp             ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------H---HHHHHHHSCCC------
T ss_pred             cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------H---HHHHHhccCCC------
Confidence            23456799999999999988999999999999999999999999963211         0   11111111000      


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-ChHHHHHHHHHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-DMRQVTGLVSKMYLE  360 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~~~  360 (381)
                         .....+..+++.+.+|+.+||+.||.+|| ++.++++.|+.++..
T Consensus       253 ---~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          253 ---RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             ---CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             ---CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence               00112334566899999999999999999 999999999987554

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=5.5e-37  Score=297.98  Aligned_cols=237  Identities=19%  Similarity=0.141  Sum_probs=163.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||||++....  ....+++.+|+.+|+.++|||||++++++...      ..+|||
T Consensus        66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv  145 (464)
T 3ttj_A           66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV  145 (464)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred             EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence            3567999999999999885  7889999876432  23467788999999999999999999999754      457999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||+ |+|.+.+...  .....+..+                 |+||||+|||++.+    +.+||+|||+++....  
T Consensus       146 ~E~~~-~~l~~~~~~~--l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~----~~~kl~DFG~a~~~~~--  216 (464)
T 3ttj_A          146 MELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTAGT--  216 (464)
T ss_dssp             EECCS-EEHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEECCCCCC-------
T ss_pred             EeCCC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCC----CCEEEEEEEeeeecCC--
Confidence            99996 5688777643  333322222                 23567999999876    5699999999986532  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH------
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV------  302 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~------  302 (381)
                         .......+||+.|+|||++.+..|+.++|||||||++|||++|++||......        .....+....      
T Consensus       217 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~--------~~~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          217 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI--------DQWNKVIEQLGTPCPE  285 (464)
T ss_dssp             ---CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCSCCHH
T ss_pred             ---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhcCCCCHH
Confidence               22345578999999999999999999999999999999999999999643211        1111111110      


Q ss_pred             -------------cCC----ccchhhhhcccccCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 -------------AGG----VGGVRKWVDRRLKDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 -------------~~~----~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                   ...    ...+...+.....+..   ....++.+.+|+.+||+.||++|||+.|+++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                         000    0001111111111111   1223678999999999999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1e-36  Score=279.95  Aligned_cols=225  Identities=20%  Similarity=0.290  Sum_probs=174.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+...... ...+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  105 (303)
T 3a7i_A           26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG  105 (303)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCC
Confidence            3567999999999999884  78899998765443 35688999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++... ......+..++                 .+|+|.||+++.+    +.+||+|||++......    ....
T Consensus       106 ~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~Dfg~~~~~~~~----~~~~  176 (303)
T 3a7i_A          106 SALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH----GEVKLADFGVAGQLTDT----QIKR  176 (303)
T ss_dssp             EHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECBTT----BCCB
T ss_pred             cHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCC----CCEEEeecccceecCcc----cccc
Confidence            999999764 34433333322                 2456999999876    56999999999875321    1223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|+.||......        ....   ..            ..
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~---~~------------~~  233 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--------KVLF---LI------------PK  233 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHH---HH------------HH
T ss_pred             CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--------HHHH---Hh------------hc
Confidence            4567999999999999889999999999999999999999998632110        1111   00            11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       234 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          234 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            1112223345677999999999999999999999976

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=8.3e-37  Score=298.96  Aligned_cols=230  Identities=17%  Similarity=0.205  Sum_probs=174.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||+||+|.+.  ++.||+|++....  ......+.+|+++|++++|||||++++++.+.+.+|+|||||++
T Consensus        26 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  105 (486)
T 3mwu_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG  105 (486)
T ss_dssp             EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCC
Confidence            4678999999999999985  7899999875432  23577899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++......+...+..++                 ++|+|+|||++..+ .+..+||+|||+++.+..     ...
T Consensus       106 ~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~-----~~~  179 (486)
T 3mwu_A          106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE-KDCDIKIIDFGLSTCFQQ-----NTK  179 (486)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS-TTCCEEECSCSCTTTBCC-----C--
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC-CCCCEEEEECCcCeECCC-----CCc
Confidence            9999999776666655444333                 35669999996532 225699999999986532     123


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.....        .....   ....+.         
T Consensus       180 ~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~---~i~~~~---------  238 (486)
T 3mwu_A          180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILK---RVETGK---------  238 (486)
T ss_dssp             --CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH---HHHHTC---------
T ss_pred             cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH---HHHhCC---------
Confidence            345679999999999875 589999999999999999999999964221        01111   111100         


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+||.+||+.||.+|||+.++++
T Consensus       239 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             CCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00011112345678999999999999999999999975

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=5e-37  Score=278.74  Aligned_cols=223  Identities=17%  Similarity=0.235  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  +..||+|+.....   ......+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   92 (279)
T 3fdn_A           13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP   92 (279)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCC
Confidence            3577999999999999986  5679999864432   2235678999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..++.                 +|+|+||+++.+    +.+||+|||++.....      .
T Consensus        93 ~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~----~~~~l~Dfg~~~~~~~------~  162 (279)
T 3fdn_A           93 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWSVHAPS------S  162 (279)
T ss_dssp             TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTT----SCEEECSCCEESCC---------
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCC----CCEEEEeccccccCCc------c
Confidence            999999998766555444433322                 456899999876    5699999999865322      2


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.....           .+......           
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~-----------  220 (279)
T 3fdn_A          163 RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----------QETYKRIS-----------  220 (279)
T ss_dssp             -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHH-----------
T ss_pred             cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----------HHHHHHHH-----------
Confidence            23456799999999999988999999999999999999999999963211           11100000           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ......+..+++.+.+|+.+||+.||.+||++.|+++
T Consensus       221 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          221 --RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             --HTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             --hCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence              0112234445678999999999999999999999976

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.1e-36  Score=292.38  Aligned_cols=231  Identities=20%  Similarity=0.258  Sum_probs=164.1

Q ss_pred             cCC-cccccccCCCceEEEEEEC--CceEEEEEeccccc--------ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe
Q 016850           93 NNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--------LDLEQLRERLSVICRSHHSSLIKLLGACVSGNC  161 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~  161 (381)
                      +.| ..+.||+|+||.||+|.+.  ++.||+|++.....        .....+.+|+++|++++|||||++++++.. +.
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~  213 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED  213 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence            344 4567999999999999985  67999998754321        122358899999999999999999999754 55


Q ss_pred             eeEEEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccccccccc
Q 016850          162 GYLVYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       162 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      .++|||||++|+|.+++.......+..+..++                 +||+|+|||++..+ .+..+||+|||+++.+
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~-~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKIL  292 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-SSCCEEECCSSTTTSC
T ss_pred             eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC-CcceEEEeecccceec
Confidence            89999999999999999887766655443332                 35669999997532 1256999999999875


Q ss_pred             ccCCCCccccccccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      ..     .......+||+.|+|||++.+   ..++.++|||||||++|+|++|++||.......       .....    
T Consensus       293 ~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-------~~~~~----  356 (419)
T 3i6u_A          293 GE-----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-------SLKDQ----  356 (419)
T ss_dssp             C----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-------CHHHH----
T ss_pred             CC-----CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-------HHHHH----
Confidence            32     223345789999999998853   568899999999999999999999996432210       01110    


Q ss_pred             HcCCccchhhhhcccccCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                 +........   ...+++.+.+|+.+||+.||.+||++.|+++
T Consensus       357 -----------i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          357 -----------ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             -----------HHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -----------HhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence                       000000000   1124678999999999999999999999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.8e-37  Score=282.17  Aligned_cols=241  Identities=20%  Similarity=0.192  Sum_probs=168.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.......  ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus         7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (311)
T 4agu_A            7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH   86 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCC
Confidence            4578999999999999985  788999987554332  356688999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      ++|.+++......+...+..+.                 ++|+|+||+++.+    +.+||+|||++.....    ....
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~  158 (311)
T 4agu_A           87 TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKH----SVIKLCDFGFARLLTG----PSDY  158 (311)
T ss_dssp             EHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECC---------
T ss_pred             chHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCC----CCEEEeeCCCchhccC----cccc
Confidence            9999999877666655443332                 2456899999876    5699999999987532    1222


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh--
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK--  311 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  311 (381)
                      .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......        ...................  
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  230 (311)
T 4agu_A          159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--------DQLYLIRKTLGDLIPRHQQVF  230 (311)
T ss_dssp             -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCSCCHHHHHHH
T ss_pred             cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhccccccccccc
Confidence            345679999999998876 56899999999999999999999999643221        1111111111000000000  


Q ss_pred             ----hhc----ccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 ----WVD----RRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ----~~~----~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          +..    +......     ...+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence                000    0000000     0235667999999999999999999999975

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.5e-36  Score=276.56  Aligned_cols=229  Identities=24%  Similarity=0.289  Sum_probs=166.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|...  +..+|+|+...... ...+.+.+|+++|++++||||+++++++.+.+..++||||+++|
T Consensus        26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  105 (285)
T 3is5_A           26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG  105 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred             ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence            3578999999999999985  77899998765443 35788999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCC----CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRNP----RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~~----~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.+++...    .......+..++                 ++|+|+||++++.. .+..+||+|||++..+..     
T Consensus       106 ~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~-~~~~~kl~Dfg~a~~~~~-----  179 (285)
T 3is5_A          106 ELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS-PHSPIKIIDFGLAELFKS-----  179 (285)
T ss_dssp             BHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS-TTCCEEECCCCCCCC--------
T ss_pred             cHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC-CCCCEEEEeeecceecCC-----
Confidence            999998542    344443333322                 25669999996532 225699999999976532     


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........||+.|+|||++. +.++.++|||||||++|||++|+.||.....           .+........       
T Consensus       180 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-----------~~~~~~~~~~-------  240 (285)
T 3is5_A          180 DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-----------EEVQQKATYK-------  240 (285)
T ss_dssp             -------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHC-------
T ss_pred             cccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-----------HHHHhhhccC-------
Confidence            12234567999999999886 5689999999999999999999999964221           0110111000       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ...... ....+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       241 --~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          241 --EPNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             --CCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             --Cccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              001100 01124568899999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=8.5e-37  Score=299.43  Aligned_cols=230  Identities=20%  Similarity=0.217  Sum_probs=170.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|++.  +..||+|++....  ......+.+|+.+|+.++|||||++++++.+.+.+|+|||||++
T Consensus        41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~  120 (494)
T 3lij_A           41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG  120 (494)
T ss_dssp             EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence            3578999999999999985  7789999876543  22467899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++..........+..++                 ++|+|+|||++..+ .+..+||+|||+++.+..     ...
T Consensus       121 g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~~kl~DfG~a~~~~~-----~~~  194 (494)
T 3lij_A          121 GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE-KDALIKIVDFGLSAVFEN-----QKK  194 (494)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS-TTCCEEECCCTTCEECBT-----TBC
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC-CCCcEEEEECCCCeECCC-----Ccc
Confidence            9999999876666544433332                 25568999987632 125699999999987532     123


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....+||+.|+|||++. +.++.++|||||||++|+|++|++||.....        ......   ...+.         
T Consensus       195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~---i~~~~---------  253 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRK---VEKGK---------  253 (494)
T ss_dssp             BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH---HHHTC---------
T ss_pred             ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH---HHhCC---------
Confidence            34567999999999886 5699999999999999999999999964321        011111   11100         


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++.+.+||.+||+.||.+|||+.++++
T Consensus       254 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          254 YTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            00001111245678999999999999999999999975

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=8.3e-37  Score=277.63  Aligned_cols=223  Identities=18%  Similarity=0.245  Sum_probs=171.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe---------------
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS---------------  158 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~---------------  158 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.....    +.+.+|++++++++||||+++++++..               
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            4567999999999999995  8899999875443    457889999999999999999999864               


Q ss_pred             -CCeeeEEEeccCCCCHHHHhcCC--CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccc
Q 016850          159 -GNCGYLVYEHVSGANLADCLRNP--RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHF  218 (381)
Q Consensus       159 -~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DF  218 (381)
                       ...+++||||+++|+|.+++...  ...+...+..++                 .+|+|+||+++++    ..+||+||
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~Df  166 (284)
T 2a19_B           91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT----KQVKIGDF  166 (284)
T ss_dssp             EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET----TEEEECCC
T ss_pred             CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC----CCEEECcc
Confidence             45589999999999999999754  334433333222                 2456888888876    56999999


Q ss_pred             ccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHH
Q 016850          219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKA  298 (381)
Q Consensus       219 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~  298 (381)
                      |++..+...     .......||+.|+|||++.+..++.++||||||+++|||++|..||...             ....
T Consensus       167 g~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------------~~~~  228 (284)
T 2a19_B          167 GLVTSLKND-----GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------------SKFF  228 (284)
T ss_dssp             TTCEESSCC-----SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------------HHHH
T ss_pred             hhheecccc-----ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------------HHHH
Confidence            999875321     1233457999999999999888999999999999999999999887421             0000


Q ss_pred             HHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          299 SEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                       ..+          ...    ..+..++..+.+|+.+||+.||.+||++.|+++.|..+..
T Consensus       229 -~~~----------~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          229 -TDL----------RDG----IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             -HHH----------HTT----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             -HHh----------hcc----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence             000          111    1122345678999999999999999999999999987743

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=4.5e-37  Score=285.90  Aligned_cols=244  Identities=16%  Similarity=0.171  Sum_probs=165.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......  ..+.+.+|+++|++++|||||++++++.+.+.++|||||++ 
T Consensus        38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  116 (329)
T 3gbz_A           38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-  116 (329)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-
Confidence            4578999999999999874  788999987554332  34567899999999999999999999999999999999996 


Q ss_pred             CCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccC-CCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEEN-AGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~-~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++..........+..++.                 +|+|+|||++..+ ..+..+||+|||+++.+..    ...
T Consensus       117 ~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~----~~~  192 (329)
T 3gbz_A          117 NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI----PIR  192 (329)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------
T ss_pred             CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCC----ccc
Confidence            69999998877666555443332                 5569999996443 2336699999999987532    122


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cch--
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGV--  309 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--  309 (381)
                      ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......        .............. ..+  
T Consensus       193 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~  264 (329)
T 3gbz_A          193 QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--------DQLFKIFEVLGLPDDTTWPG  264 (329)
T ss_dssp             -------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCCCCTTTSTT
T ss_pred             ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--------HHHHHHHHHhCCCchhhhhh
Confidence            33456789999999998874 4899999999999999999999999643211        11111111110000 000  


Q ss_pred             ----hhhh-------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 ----RKWV-------DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ----~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          ..+.       ...+....+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                0000       000000001124578899999999999999999999865

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.5e-36  Score=277.08  Aligned_cols=240  Identities=16%  Similarity=0.199  Sum_probs=168.5

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+.. ++.||+|++......  ..+.+.+|++++++++|||||++++++.+.+..++||||++ |
T Consensus         6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~   84 (288)
T 1ob3_A            6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-Q   84 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred             hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-C
Confidence            3577999999999999986 788999987654332  34778899999999999999999999999999999999996 6


Q ss_pred             CHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++... .......+..+                 |++|+|+||+++.+    +.+||+|||+++....    ....
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~  156 (288)
T 1ob3_A           85 DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE----GELKIADFGLARAFGI----PVRK  156 (288)
T ss_dssp             EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECCTTHHHHHCC--------
T ss_pred             CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC----CCEEEeECccccccCc----cccc
Confidence            999999764 33443333222                 23566999999876    5699999999986532    1122


Q ss_pred             ccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cchhhh
Q 016850          235 VNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGVRKW  312 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  312 (381)
                      .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......        .............. ..+...
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~  228 (288)
T 1ob3_A          157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--------DQLMRIFRILGTPNSKNWPNV  228 (288)
T ss_dssp             -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCTTTSTTG
T ss_pred             cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHHCCCChhhchhh
Confidence            3446789999999998764 5899999999999999999999999643211        11111111111000 000000


Q ss_pred             -----hccccc-------CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 -----VDRRLK-------DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 -----~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           +++...       ......+++.+.+|+.+||+.||++|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                 000000       0111235678999999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.7e-37  Score=290.85  Aligned_cols=180  Identities=17%  Similarity=0.241  Sum_probs=143.3

Q ss_pred             hcCC-cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcC-----CCCcceEEEEEEeCCeee
Q 016850           92 TNNF-LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSH-----HSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        92 ~~~f-~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-----h~nIv~l~~~~~~~~~~~  163 (381)
                      .+.| ..+.||+|+||.||+|++  .++.||+|++.. .......+.+|+.++++++     |||||++++++...+..+
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~  112 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC  112 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence            3445 457899999999999999  478899998753 2234566788999999996     999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCCC--CCccchHHHH-----------------HHhhhcceeecccC-----------------
Q 016850          164 LVYEHVSGANLADCLRNPRN--PSFTVLSTWL-----------------SRMQSSSIIVSEEN-----------------  207 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~-----------------~~l~~~Nill~~~~-----------------  207 (381)
                      +||||+ +++|.+++.....  .....+..++                 +||||+|||+++..                 
T Consensus       113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~  191 (360)
T 3llt_A          113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI  191 (360)
T ss_dssp             EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred             EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccc
Confidence            999999 8999999986542  4433333222                 35679999997521                 


Q ss_pred             ----CCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccc
Q 016850          208 ----AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKF  280 (381)
Q Consensus       208 ----~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~  280 (381)
                          ..+..+||+|||+++....       ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       192 ~~~~~~~~~~kl~DFG~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          192 QIYRTKSTGIKLIDFGCATFKSD-------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             EEEEESCCCEEECCCTTCEETTS-------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccCCCCEEEEeccCceecCC-------CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence                0126799999999986432       22356799999999999999999999999999999999999999964

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1e-36  Score=278.34  Aligned_cols=225  Identities=18%  Similarity=0.263  Sum_probs=166.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe----CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS----GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|.+.  +..|++|+......  ...+.+.+|+.+|++++|||||++++++..    ...+++||||
T Consensus        31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~  110 (290)
T 1t4h_A           31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL  110 (290)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred             eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence            356999999999999985  56788887654332  246778999999999999999999999875    4568999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHH-------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          169 VSGANLADCLRNPRNPSFTVLST-------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~-------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +++|+|.+++..........+..                   +|.+|+|+||+++..+   +.+||+|||++.....   
T Consensus       111 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~---~~~kl~Dfg~~~~~~~---  184 (290)
T 1t4h_A          111 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKRA---  184 (290)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT---SCEEECCTTGGGGCCT---
T ss_pred             cCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCC---CCEEEeeCCCcccccc---
Confidence            99999999998755555443322                   2335668899987322   5699999999975322   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                         .......||+.|+|||++. +.++.++|||||||++|+|++|+.||.....          ... .......     
T Consensus       185 ---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----------~~~-~~~~~~~-----  244 (290)
T 1t4h_A          185 ---SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN----------AAQ-IYRRVTS-----  244 (290)
T ss_dssp             ---TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----------HHH-HHHHHTT-----
T ss_pred             ---cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc----------HHH-HHHHHhc-----
Confidence               2234567999999999876 4689999999999999999999999964221          011 1111110     


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           .......+...++.+.+|+.+||+.||.+|||+.++++
T Consensus       245 -----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          245 -----GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             -----TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----cCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                 00011112223467999999999999999999999975

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=9e-37  Score=294.27  Aligned_cols=179  Identities=18%  Similarity=0.263  Sum_probs=137.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~  166 (381)
                      ..+.||+|+||.||+|++.  ++.||||++.....  ...+++.+|+++|++++|||||++++++...     +.+|+||
T Consensus        30 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~  109 (432)
T 3n9x_A           30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVL  109 (432)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred             EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEE
Confidence            3567999999999999985  67899998754322  2467889999999999999999999999865     5789999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||++ |+|.+++.....+....+..++.                 ||||+|||++.+    +.+||+|||+++.......
T Consensus       110 e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~----~~~kL~DFGla~~~~~~~~  184 (432)
T 3n9x_A          110 EIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD----CSVKVCDFGLARTINSEKD  184 (432)
T ss_dssp             ECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEEC-----
T ss_pred             ecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCC----CCEEEccCCCccccccccc
Confidence            9995 79999999877666555443332                 566899999876    5699999999987643211


Q ss_pred             Cc------------------cccccccCCCccccchhhh-cCCCCCcchhHHHHHHHHHHHHhCCcccc
Q 016850          230 NE------------------SGKVNKIEGTRGYMAPEFQ-ASGVVTQKCDVYAFGVVVLELLSGEEVLK  279 (381)
Q Consensus       230 ~~------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDIwSlGvil~elltg~~pf~  279 (381)
                      ..                  .......+||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            10                  0123567899999999986 45679999999999999999999766654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3.6e-37  Score=284.83  Aligned_cols=237  Identities=15%  Similarity=0.187  Sum_probs=173.1

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe----CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS----GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|..  .++.||+|++........+.+.+|++++++++||||+++++++..    ....++||||+
T Consensus        33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~  112 (317)
T 2buj_A           33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF  112 (317)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence            357799999999999997  488999998766555567889999999999999999999999873    45789999999


Q ss_pred             CCCCHHHHhcC----CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          170 SGANLADCLRN----PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       170 ~~gsL~~~l~~----~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ++|+|.+++..    ....+...+..++                 ++|+|+||+++.+    +.+||+|||++.......
T Consensus       113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~----~~~kl~dfg~~~~~~~~~  188 (317)
T 2buj_A          113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDE----GQPVLMDLGSMNQACIHV  188 (317)
T ss_dssp             TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----SCEEECCCSSCEESCEEE
T ss_pred             CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCC----CCEEEEecCcchhccccc
Confidence            99999999875    3344444433332                 2456999999876    559999999987643211


Q ss_pred             CCcc-----ccccccCCCccccchhhhcCCC---CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH
Q 016850          229 GNES-----GKVNKIEGTRGYMAPEFQASGV---VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       229 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~---~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                      ....     .......||+.|+|||++.+..   ++.++|||||||++|||++|+.||........              
T Consensus       189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--------------  254 (317)
T 2buj_A          189 EGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD--------------  254 (317)
T ss_dssp             ESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS--------------
T ss_pred             ccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc--------------
Confidence            1100     1113456899999999987543   68999999999999999999999963221100              


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                             .+............+..+++.+.+|+.+||+.||.+||++.++++.|+.+
T Consensus       255 -------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~  304 (317)
T 2buj_A          255 -------SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL  304 (317)
T ss_dssp             -------CHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             -------hhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence                   01111111111222334567899999999999999999999999999876

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=3.5e-37  Score=284.34  Aligned_cols=236  Identities=17%  Similarity=0.211  Sum_probs=164.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe----eeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNC----GYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~----~~lv~  166 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......   ....+.+|++++++++|||||++++++.....    .|+||
T Consensus        16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~   95 (311)
T 3ork_A           16 LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM   95 (311)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEE
Confidence            3567999999999999974  789999987654332   34578899999999999999999999886543    49999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++|+|.+++..........+..++                 ++|+|+||+++.+    +.+||+|||+++.+.... 
T Consensus        96 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~a~~~~~~~-  170 (311)
T 3ork_A           96 EYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT----NAVKVMDFGIARAIADSG-  170 (311)
T ss_dssp             ECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETT----SCEEECCCSCC--------
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCC----CCEEEeeccCcccccccc-
Confidence            999999999999876666555443332                 2456999999876    559999999998753311 


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .............  
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----------~~~~~~~~~~~~~--  237 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----------VSVAYQHVREDPI--  237 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHCCCC--
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhcCCCC--
Confidence            111223456799999999999998999999999999999999999999964221           1111111111000  


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH-HHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT-GLVSK  356 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~  356 (381)
                          .+.   .....+++.+.+|+.+||+.||.+||++.+++ ..+..
T Consensus       238 ----~~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          238 ----PPS---ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             ----CHH---HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ----Ccc---cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence                000   00112467899999999999999999766654 33433

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=7.1e-37  Score=299.32  Aligned_cols=230  Identities=20%  Similarity=0.221  Sum_probs=176.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||||++....   ....+.+.+|+++|++++|||||++++++.+.+.+++|||||+
T Consensus        30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~  109 (484)
T 3nyv_A           30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT  109 (484)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence            3567999999999999985  7899999875432   3357889999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++......+...+..++                 ++|+|+|||++... .+..+||+|||+++.+..     ..
T Consensus       110 ~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~~-----~~  183 (484)
T 3nyv_A          110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS-KDANIRIIDFGLSTHFEA-----SK  183 (484)
T ss_dssp             SCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-TTCCEEECCTTHHHHBCC-----CC
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC-CCCcEEEEeeeeeEEccc-----cc
Confidence            99999999887766655444333                 25669999995421 126699999999987532     12


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++.+ .++.++|||||||++|+|++|++||.....        .....   ....+.        
T Consensus       184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~---~i~~~~--------  243 (484)
T 3nyv_A          184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--------YDILK---KVEKGK--------  243 (484)
T ss_dssp             SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH---HHHHCC--------
T ss_pred             ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--------HHHHH---HHHcCC--------
Confidence            3445679999999998875 689999999999999999999999964321        01111   111110        


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..........+++.+.+||.+||+.||.+|||+.|+++
T Consensus       244 -~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          244 -YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             -CCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -CCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence             00011112345778999999999999999999999975

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.4e-36  Score=275.27  Aligned_cols=241  Identities=16%  Similarity=0.193  Sum_probs=175.6

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEE-EeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGAC-VSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|++  .++.||+|+......  .+++.+|+++++.++|++++..++++ .+.+..++||||+ +|
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (296)
T 4hgt_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP   89 (296)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CC
Confidence            467899999999999997  478899997544332  34688999999999988877776655 5678889999999 99


Q ss_pred             CHHHHhcC-CCCCCccchHHHH-----------------HHhhhcceee---cccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIV---SEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill---~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.+++.. ....+...+..++                 ++|+|+||++   ++.    ..+||+|||+++.+.......
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~----~~~kL~Dfg~a~~~~~~~~~~  165 (296)
T 4hgt_A           90 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKG----NLVYIIDFGLAKKYRDARTHQ  165 (296)
T ss_dssp             BHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGT----TCEEECCCTTCEECBCTTTCC
T ss_pred             CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCC----CeEEEecCccceeccCcccCc
Confidence            99999974 3344444433332                 2566999999   444    569999999998764322111


Q ss_pred             c---ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          232 S---GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       232 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                      .   .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........     .......        
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~--------  232 (296)
T 4hgt_A          166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-----KYERISE--------  232 (296)
T ss_dssp             BCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-----HHHHHHH--------
T ss_pred             cCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-----hhhhhhc--------
Confidence            1   12345679999999999999899999999999999999999999997543322111     1111000        


Q ss_pred             hhhhhcccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          309 VRKWVDRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       309 ~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                            ......   ....+++.+.+|+.+||+.||++||++.+|++.|++++.+..
T Consensus       233 ------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          233 ------KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             ------HHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ------ccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence                  000000   011235689999999999999999999999999999988654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.7e-37  Score=290.09  Aligned_cols=180  Identities=21%  Similarity=0.308  Sum_probs=129.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc--cccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCC--eeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR--SLDLEQLRERLSVICRSH-HSSLIKLLGACVSGN--CGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~--~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++....  .....++.+|+.+|+++. |||||++++++...+  .+|+||||
T Consensus        13 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~   92 (388)
T 3oz6_A           13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY   92 (388)
T ss_dssp             EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEEC
T ss_pred             EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecc
Confidence            4678999999999999985  7899999875432  234667889999999997 999999999997544  78999999


Q ss_pred             cCCCCHHHHhcCCCCCCccc-------hHHH----------HHHhhhcceeecccCCCccceEEcccccccccccCCC--
Q 016850          169 VSGANLADCLRNPRNPSFTV-------LSTW----------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG--  229 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~-------~~~~----------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~--  229 (381)
                      |+ |+|.+++.... .....       ++..          |+||+|+|||++.+    +.+||+|||+++.+.....  
T Consensus        93 ~~-~~L~~~~~~~~-~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFG~a~~~~~~~~~~  166 (388)
T 3oz6_A           93 ME-TDLHAVIRANI-LEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAE----CHVKVADFGLSRSFVNIRRVT  166 (388)
T ss_dssp             CS-EEHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEESSSCCCCC
T ss_pred             cC-cCHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCC----CCEEecCCccccccccccccc
Confidence            96 79999997643 33222       2222          23566888888876    5699999999986532110  


Q ss_pred             ---------------CccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCcccccc
Q 016850          230 ---------------NESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFV  281 (381)
Q Consensus       230 ---------------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~  281 (381)
                                     .........+||+.|+|||++.+ ..++.++|||||||++|||++|++||...
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             CCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence                           11122345689999999999876 67899999999999999999999999743

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-37  Score=290.37  Aligned_cols=244  Identities=18%  Similarity=0.241  Sum_probs=180.4

Q ss_pred             cccccccCCCceEEEEEE-----CCceEEEEEecccc----cccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTI-----RGKDVIIFQRKLRR----SLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||.||+|+.     .++.||||++....    ....+.+.+|+++|+++ +||||+++++++.+.+.++||
T Consensus        58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv  137 (355)
T 1vzo_A           58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI  137 (355)
T ss_dssp             EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEE
Confidence            357799999999999998     47899999875432    22456678899999999 699999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+++|+|.++|..........+..++                 +||+|+|||++.+    +.+||+|||+++.+..  
T Consensus       138 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~DfG~a~~~~~--  211 (355)
T 1vzo_A          138 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN----GHVVLTDFGLSKEFVA--  211 (355)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEESCSSEEEECCG--
T ss_pred             eecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC----CcEEEeeCCCCeeccc--
Confidence            9999999999999876656544443332                 2566999999876    5699999999986532  


Q ss_pred             CCccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                       .........+||+.|+|||++.+  ..++.++|||||||++|||++|+.||........       ..........   
T Consensus       212 -~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-------~~~~~~~~~~---  280 (355)
T 1vzo_A          212 -DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-------QAEISRRILK---  280 (355)
T ss_dssp             -GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-------HHHHHHHHHH---
T ss_pred             -CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-------HHHHHHHHhc---
Confidence             12223345679999999999885  3478999999999999999999999964322110       0111111100   


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhhcC
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                                ....++..++..+.+||.+||+.||.+||     ++.|+   ++..+.+..+|.....
T Consensus       281 ----------~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~el---l~h~~f~~~~~~~l~~  335 (355)
T 1vzo_A          281 ----------SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEI---KEHLFFQKINWDDLAA  335 (355)
T ss_dssp             ----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHH---HTSGGGTTCCHHHHHT
T ss_pred             ----------cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHH---HcCcchhcCChhHhhh
Confidence                      11233445667899999999999999999     76666   4566666667765543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=9.9e-37  Score=285.67  Aligned_cols=221  Identities=18%  Similarity=0.221  Sum_probs=167.8

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|+.  .++.||||++......   ..+.+.+|+++|++++|||||++++++.+.+..++||||++ 
T Consensus        59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-  137 (348)
T 1u5q_A           59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-  137 (348)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence            46799999999999997  4788999987654322   34678999999999999999999999999999999999996 


Q ss_pred             CCHHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          172 ANLADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       172 gsL~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      |+|.+++.. ........+..++                 ++|+|+|||++.+    +.+||+|||+++....       
T Consensus       138 g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----~~~kL~DfG~a~~~~~-------  206 (348)
T 1u5q_A          138 GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP----GLVKLGDFGSASIMAP-------  206 (348)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT----TEEEECCCTTCBSSSS-------
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC----CCEEEeeccCceecCC-------
Confidence            789888854 3334433333222                 2566999999876    5699999999976432       


Q ss_pred             cccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          234 KVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       .....||+.|+|||++.   .+.++.++|||||||++|||++|+.||.....           ..........      
T Consensus       207 -~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-----------~~~~~~~~~~------  268 (348)
T 1u5q_A          207 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIAQN------  268 (348)
T ss_dssp             -BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHS------
T ss_pred             -CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHHhc------
Confidence             23467999999999884   56789999999999999999999999863211           1111111111      


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ......+..+++.+.+||.+||+.||.+|||+.++++
T Consensus       269 -----~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          269 -----ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             -----CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -----CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                 1111122345678999999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.4e-36  Score=277.78  Aligned_cols=227  Identities=18%  Similarity=0.261  Sum_probs=168.3

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      ..||+|+||.||+|.+.  +..||+|..........+.+.+|+.+++.++|||||++++++.+.+..++||||+++|+|.
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            46899999999999984  6789999876655556788999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCC---CCccchH-------HHHH----------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          176 DCLRNPRN---PSFTVLS-------TWLS----------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       176 ~~l~~~~~---~~~~~~~-------~~~~----------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +++.....   .....+.       ..+.          +|+|+||+++..+   +.+||+|||++.....    .....
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~---~~~kl~Dfg~~~~~~~----~~~~~  180 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS---GVLKISDFGTSKRLAG----INPCT  180 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---CCEEECCTTTCEESCC---------
T ss_pred             HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCC---CCEEEeecccccccCC----CCCcc
Confidence            99976432   2222222       2222          4568999997622   5699999999986532    11223


Q ss_pred             cccCCCccccchhhhcCCC--CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          236 NKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~--~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ....||+.|+|||++.+..  ++.++||||||+++|+|++|+.||......         ........            
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~~~~------------  239 (295)
T 2clq_A          181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---------QAAMFKVG------------  239 (295)
T ss_dssp             CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---------HHHHHHHH------------
T ss_pred             cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---------hHHHHhhc------------
Confidence            4567999999999987643  789999999999999999999999632210         00000000            


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........+..+++.+.+|+.+||+.||++||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            001122334456778999999999999999999999964

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3e-36  Score=284.35  Aligned_cols=226  Identities=19%  Similarity=0.266  Sum_probs=171.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--------cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--------DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|++.  |+.||||+.......        ..+.+.+|+.+++++ +||||+++++++...+..++
T Consensus        98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  177 (365)
T 2y7j_A           98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL  177 (365)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred             cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence            3468999999999999985  889999987654321        145678999999999 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          165 VYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      ||||+++|+|.+++..........+..++                 +||+|+||+++.+    +.+||+|||++..+.. 
T Consensus       178 v~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~----~~ikl~DfG~~~~~~~-  252 (365)
T 2y7j_A          178 VFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN----MQIRLSDFGFSCHLEP-  252 (365)
T ss_dssp             EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCTTCEECCT-
T ss_pred             EEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC----CCEEEEecCcccccCC-
Confidence            99999999999999876555544433332                 2567999999887    5699999999987532 


Q ss_pred             CCCccccccccCCCccccchhhhcC------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQAS------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                          ........||+.|+|||++.+      ..++.++|||||||++|||++|+.||.....        .....   ..
T Consensus       253 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--------~~~~~---~i  317 (365)
T 2y7j_A          253 ----GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--------ILMLR---MI  317 (365)
T ss_dssp             ----TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH---HH
T ss_pred             ----CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--------HHHHH---HH
Confidence                122345789999999998863      3588999999999999999999999963211        01111   11


Q ss_pred             HcCCccchhhhhcccccCCCC--HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          302 VAGGVGGVRKWVDRRLKDSYP--VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       302 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+           ......+  ..++..+.+|+.+||+.||++||++.++++
T Consensus       318 ~~~-----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          318 MEG-----------QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHT-----------CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HhC-----------CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            110           0000000  123567999999999999999999999976

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=4.1e-36  Score=274.79  Aligned_cols=244  Identities=16%  Similarity=0.168  Sum_probs=176.6

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEE-EeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGAC-VSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|++  .++.||+|+......  .+++.+|+.+++.++|++++..+.++ ...+..++||||+ +|
T Consensus        13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~   89 (296)
T 3uzp_A           13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP   89 (296)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CC
Confidence            356799999999999997  488999998654433  35689999999999988877666655 5678889999999 89


Q ss_pred             CHHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeec---ccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVS---EENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~---~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.+++.. ....+...+..++                 ++|+|+||+++   ++    ..+||+|||+++.........
T Consensus        90 ~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~----~~~kl~Dfg~~~~~~~~~~~~  165 (296)
T 3uzp_A           90 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKG----NLVYIIDFGLAKKYRDARTHQ  165 (296)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGT----TCEEECCCTTCEECBCTTTCC
T ss_pred             CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCC----CeEEEeeCCCccccccccccc
Confidence            99999973 3344444433332                 25669999995   33    569999999998764322111


Q ss_pred             c---ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          232 S---GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       232 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                      .   .......||+.|+|||++.+..++.++|||||||++|||++|+.||.........     ...........     
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~~-----  235 (296)
T 3uzp_A          166 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYERISEKKM-----  235 (296)
T ss_dssp             BCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHHHHHHHH-----
T ss_pred             ccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-----hhhhhhccccc-----
Confidence            0   1234567999999999999989999999999999999999999999754322111     11111100000     


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          309 VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                        .......    ...+++.+.+|+.+||+.||.+||++.+|++.|++++.+..
T Consensus       236 --~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          236 --STPIEVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             --HSCHHHH----TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             --CCchHHH----HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence              0000000    12345789999999999999999999999999999988643

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.4e-36  Score=306.60  Aligned_cols=235  Identities=20%  Similarity=0.285  Sum_probs=174.3

Q ss_pred             ccccccCCCceEEEEEEC-----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR-----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      .+.||+|+||.||+|.+.     +..||+|+...... ...+.+.+|+.+|++++|||||++++++. ++..++||||++
T Consensus       395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~  473 (656)
T 2j0j_A          395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT  473 (656)
T ss_dssp             EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred             eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence            567999999999999984     34577777544322 23577999999999999999999999985 456899999999


Q ss_pred             CCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++.... ......+..+                 |+||+|+|||++.+    +.+||+|||+++....   ...
T Consensus       474 ~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~----~~vkL~DFG~a~~~~~---~~~  546 (656)
T 2j0j_A          474 LGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN----DCVKLGDFGLSRYMED---STY  546 (656)
T ss_dssp             TCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----TEEEECCCCCCCSCCC------
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCC----CCEEEEecCCCeecCC---Ccc
Confidence            999999998643 3343332222                 23567999999876    5699999999987532   112


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......||+.|+|||++.+..++.++|||||||++|||++ |..||......        ....   .           
T Consensus       547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--------~~~~---~-----------  604 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIG---R-----------  604 (656)
T ss_dssp             -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------HHHH---H-----------
T ss_pred             eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--------HHHH---H-----------
Confidence            22334567889999999988899999999999999999997 99999643210        1111   1           


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                       +........+..+++.+.+|+.+||+.||.+||++.+|++.|+.++.+.+
T Consensus       605 -i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k  654 (656)
T 2j0j_A          605 -IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  654 (656)
T ss_dssp             -HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             -HHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence             11111223344567889999999999999999999999999999987654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=8.6e-37  Score=284.22  Aligned_cols=240  Identities=21%  Similarity=0.249  Sum_probs=170.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|++.  ++.||+|++......  ..+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  109 (331)
T 4aaa_A           30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT  109 (331)
T ss_dssp             EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence            467999999999999996  788999987544333  3456889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.+++..........+..++.                 +|+|+||+++.+    +.+||+|||+++.+..    .....
T Consensus       110 ~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~~  181 (331)
T 4aaa_A          110 ILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQS----GVVKLCDFGFARTLAA----PGEVY  181 (331)
T ss_dssp             HHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEECCCTTC--------------
T ss_pred             hHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCC----CcEEEEeCCCceeecC----Ccccc
Confidence            9999887766666555443332                 556999999877    5699999999976532    12233


Q ss_pred             cccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC---------
Q 016850          236 NKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG---------  305 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  305 (381)
                      ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||......        .............         
T Consensus       182 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~  253 (331)
T 4aaa_A          182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI--------DQLYHIMMCLGNLIPRHQELFN  253 (331)
T ss_dssp             --CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCSCCHHHHHHHH
T ss_pred             CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH--------HHHHHHHHHhCCCChhhhhHhh
Confidence            456799999999998875 6899999999999999999999999643221        1111111100000         


Q ss_pred             -ccchhhhhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 -VGGVRKWVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 -~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .........+......     .+.+++.+.+|+.+||+.||++|||+.|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             0000000001111111     1235678999999999999999999999965

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.3e-36  Score=274.08  Aligned_cols=223  Identities=14%  Similarity=0.172  Sum_probs=173.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+..  +..||+|+.....   ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus        18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   97 (284)
T 2vgo_A           18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP   97 (284)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence            3567999999999999985  6778998875432   2235789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++..........+..++.                 +|+|+||+++.+    +.+||+|||++.....      .
T Consensus        98 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~Dfg~~~~~~~------~  167 (284)
T 2vgo_A           98 RGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK----GELKIADFGWSVHAPS------L  167 (284)
T ss_dssp             TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTT----CCEEECCCTTCEECSS------S
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCC----CCEEEecccccccCcc------c
Confidence            999999998766555444433332                 456899999876    5599999999876432      1


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.....           .+......           
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~~~-----------  225 (284)
T 2vgo_A          168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----------TETHRRIV-----------  225 (284)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHH-----------
T ss_pred             ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----------hHHHHHHh-----------
Confidence            22346799999999999988999999999999999999999999964221           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..  ...++..++..+.+||.+||+.||.+||++.++++
T Consensus       226 ~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          226 NV--DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             TT--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cc--ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            10  11233445678999999999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.6e-36  Score=281.53  Aligned_cols=225  Identities=15%  Similarity=0.185  Sum_probs=174.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||++.+.  ++.+++|+......   ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        45 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  124 (335)
T 2owb_A           45 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR  124 (335)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCC
Confidence            3577999999999999986  67888888654322   246778999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++..........+..++.                 +|+|+||+++.+    +.+||+|||+++....    ...
T Consensus       125 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~----~~~kl~Dfg~~~~~~~----~~~  196 (335)
T 2owb_A          125 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED----LEVKIGDFGLATKVEY----DGE  196 (335)
T ss_dssp             TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT----CCEEECCCTTCEECCS----TTC
T ss_pred             CCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCC----CCEEEeeccCceeccc----Ccc
Confidence            999999998766665554443332                 456889999876    5699999999987532    112


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....           .+.......          
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~~~~~~~~----------  255 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----------KETYLRIKK----------  255 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHH----------
T ss_pred             cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----------HHHHHHHhc----------
Confidence            23456799999999999988899999999999999999999999963211           111111110          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .  ....+..+++.+.+||.+||+.||.+||++.|+++
T Consensus       256 -~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          256 -N--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             -T--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             -C--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0  11223345678999999999999999999999976

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.8e-36  Score=274.80  Aligned_cols=225  Identities=19%  Similarity=0.266  Sum_probs=152.4

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|+.  .++.||+|+......   ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus        15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   94 (278)
T 3cok_A           15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCH   94 (278)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCC
Confidence            356799999999999997  478999998754321   235789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          171 GANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       171 ~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      +|+|.+++... ...+...+..++                 .+|+|+||+++.+    +.+||+|||++......    .
T Consensus        95 ~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~----~~~kl~dfg~~~~~~~~----~  166 (278)
T 3cok_A           95 NGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRN----MNIKIADFGLATQLKMP----H  166 (278)
T ss_dssp             TEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTT----CCEEECCCTTCEECC-------
T ss_pred             CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCC----CCEEEEeecceeeccCC----C
Confidence            99999999875 334444333332                 2456899999876    56999999999875321    1


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......||+.|+|||++.+..++.++||||||+++|||++|+.||........                      +...
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------------~~~~  224 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------------------LNKV  224 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------------C
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------------HHHH
Confidence            122346799999999999888899999999999999999999999964322100                      0000


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....  ...+..++..+.+|+.+||+.||++||++.++++
T Consensus       225 ~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          225 VLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            0000  1123345678999999999999999999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.9e-36  Score=295.48  Aligned_cols=228  Identities=20%  Similarity=0.228  Sum_probs=171.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-------------ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-------------LDLEQLRERLSVICRSHHSSLIKLLGACVSGN  160 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-------------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~  160 (381)
                      ..+.||+|+||+||+|.+.  ++.||+|++.....             ...+.+.+|+.+|++|+|||||++++++.+.+
T Consensus        40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  119 (504)
T 3q5i_A           40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK  119 (504)
T ss_dssp             EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            4678999999999999985  67899998754321             23567899999999999999999999999999


Q ss_pred             eeeEEEeccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccc
Q 016850          161 CGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      .+|||||||++|+|.+++......++..+..++.                 +|+|+|||++..+. ...+||+|||+++.
T Consensus       120 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~-~~~~kl~Dfg~a~~  198 (504)
T 3q5i_A          120 YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS-LLNIKIVDFGLSSF  198 (504)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTC-CSSEEECCCTTCEE
T ss_pred             EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCC-CccEEEEECCCCEE
Confidence            9999999999999999998766666554443332                 45689999887531 23699999999987


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      +..     ........||+.|+|||++. +.++.++|||||||++|+|++|.+||......        ....   ....
T Consensus       199 ~~~-----~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~---~i~~  261 (504)
T 3q5i_A          199 FSK-----DYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--------DIIK---KVEK  261 (504)
T ss_dssp             CCT-----TSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH---HHHH
T ss_pred             cCC-----CCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHH---HHHc
Confidence            532     12334567999999999887 56899999999999999999999999643210        1111   1111


Q ss_pred             CCccchhhhhcccccCC--CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDS--YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +           .....  ....+++.+.+||.+||+.||.+|||+.|+++
T Consensus       262 ~-----------~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          262 G-----------KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             C-----------CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             C-----------CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0           00000  01234678999999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=4e-36  Score=274.90  Aligned_cols=225  Identities=15%  Similarity=0.186  Sum_probs=174.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  ++.+|+|+......   ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   98 (294)
T 2rku_A           19 RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCR   98 (294)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCC
Confidence            3577999999999999996  67888888754422   245778899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++..........+..++.                 +|+|+||+++.+    +.+||+|||++.....    ...
T Consensus        99 ~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~----~~~  170 (294)
T 2rku_A           99 RRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED----LEVKIGDFGLATKVEY----DGE  170 (294)
T ss_dssp             TCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEECCS----TTC
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCC----CCEEEEeccCceeccc----Ccc
Confidence            999999998766665554443332                 456999999876    5699999999987532    112


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.....           .+......           
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~~~-----------  228 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----------KETYLRIK-----------  228 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHH-----------
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHh-----------
Confidence            23446799999999999988899999999999999999999999964221           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..  ....+..+++.+.+|+.+||+.||++||++.++++
T Consensus       229 ~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          229 KN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             TT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hc--cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            00  11223345678999999999999999999999976

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.1e-36  Score=277.49  Aligned_cols=242  Identities=15%  Similarity=0.191  Sum_probs=170.5

Q ss_pred             cCC-cccccccCCCceEEEEEE--CCceEEEEEecccccc-----cHHHHHHHHHHHhhcC---CCCcceEEEEEEeCC-
Q 016850           93 NNF-LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL-----DLEQLRERLSVICRSH---HSSLIKLLGACVSGN-  160 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~-  160 (381)
                      +.| ..+.||+|+||.||+|++  .++.||+|++......     ....+.+|++++++++   |||||++++++.... 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~   88 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT   88 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence            344 467899999999999997  4789999987643321     2356778888887774   999999999998755 


Q ss_pred             ----eeeEEEeccCCCCHHHHhcCCCC--CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcc
Q 016850          161 ----CGYLVYEHVSGANLADCLRNPRN--PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICH  217 (381)
Q Consensus       161 ----~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~D  217 (381)
                          ..++||||++ |+|.+++.....  .++..+..++                 +||+|+||+++.+    +.+||+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~----~~~kl~D  163 (308)
T 3g33_A           89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG----GTVKLAD  163 (308)
T ss_dssp             SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTT----SCEEECS
T ss_pred             CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC----CCEEEee
Confidence                5899999996 799999987654  4444433332                 2556999999876    5699999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      ||+++....     ........||+.|+|||++.+..++.++|||||||++|||++|++||......        .....
T Consensus       164 fg~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~~~~  230 (308)
T 3g33_A          164 FGLARIYSY-----QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--------DQLGK  230 (308)
T ss_dssp             CSCTTTSTT-----CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH--------HHHHH
T ss_pred             CccccccCC-----CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHH
Confidence            999976532     22334577999999999999899999999999999999999999999643221        11111


Q ss_pred             HHHHHcCCc-cchhh-------hhcccccC---CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          298 ASEAVAGGV-GGVRK-------WVDRRLKD---SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       298 ~~~~~~~~~-~~~~~-------~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......... ..+..       .+......   .....+++.+.+||.+||+.||++|||+.|+++
T Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          231 IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            111110000 00000       00000000   001234578999999999999999999999975

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.8e-36  Score=281.54  Aligned_cols=229  Identities=16%  Similarity=0.157  Sum_probs=170.5

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      +.||+|+||.||+|...  ++.||+|++.....  .....+.+|+.++.++ +||||+++++++.+.+..++||||+++|
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~  114 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG  114 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence            67999999999999986  88999998765432  2477899999999999 5699999999999999999999999999


Q ss_pred             CHHHHhcCC--CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRNP--RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~~--~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|.+++...  .......+..++                 ++|+|+||+++... .++.+||+|||+++....     ..
T Consensus       115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~-~~~~~kL~Dfg~a~~~~~-----~~  188 (327)
T 3lm5_A          115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIGH-----AC  188 (327)
T ss_dssp             EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT-TBCCEEECCGGGCEEC---------
T ss_pred             cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC-CCCcEEEeeCccccccCC-----cc
Confidence            999999654  344444433332                 24569999998721 125699999999987532     12


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.....           .+.......         .
T Consensus       189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----------~~~~~~i~~---------~  248 (327)
T 3lm5_A          189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-----------QETYLNISQ---------V  248 (327)
T ss_dssp             -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH---------T
T ss_pred             ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----------hHHHHHHHh---------c
Confidence            23446799999999999999999999999999999999999999964221           011111100         0


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...........+++.+.+||.+||+.||.+|||+.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            111112223345678999999999999999999999854

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=4.9e-37  Score=278.66  Aligned_cols=228  Identities=13%  Similarity=0.195  Sum_probs=170.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|...  ++.||+|+......  ...+.+.+|++++++++||||+++++++.+  .+.+++||||+
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~   89 (279)
T 2w5a_A           10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC   89 (279)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECC
T ss_pred             eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCC
Confidence            3577999999999999985  78899998765432  245678999999999999999999998854  67899999999


Q ss_pred             CCCCHHHHhcCCC----CCCccchH----------------------HHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          170 SGANLADCLRNPR----NPSFTVLS----------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       170 ~~gsL~~~l~~~~----~~~~~~~~----------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++|+|.+++....    ..+...+.                      .+|.+|+|+||+++.+    +.+||+|||+++.
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~----~~~kl~dfg~~~~  165 (279)
T 2w5a_A           90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLARI  165 (279)
T ss_dssp             TTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSS----SCEEECCCCHHHH
T ss_pred             CCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCC----CCEEEecCchhee
Confidence            9999999997532    23332221                      2334567899999876    5699999999986


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ...    .........||+.|+|||++.+..++.++||||||+++|+|++|+.||.....        .......   . 
T Consensus       166 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~i---~-  229 (279)
T 2w5a_A          166 LNH----DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAGKI---R-  229 (279)
T ss_dssp             C-------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH---H-
T ss_pred             ecc----ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--------HHHHHHH---h-
Confidence            532    11223346799999999999988899999999999999999999999964321        0111111   1 


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLV  354 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L  354 (381)
                                 .......+..+++.+.+++.+||+.||.+||++.||++.+
T Consensus       230 -----------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          230 -----------EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             -----------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             -----------hcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence                       1111223345667899999999999999999999998743

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3e-36  Score=282.94  Aligned_cols=246  Identities=12%  Similarity=0.128  Sum_probs=177.3

Q ss_pred             cccccccCCCceEEEEEEC----------CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcce--------------
Q 016850           96 LAKKFTSSSASASWRGTIR----------GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIK--------------  151 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~----------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~--------------  151 (381)
                      ..+.||+|+||.||+|++.          ++.||+|.....     +.+.+|++++++++|||||+              
T Consensus        46 ~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~  120 (352)
T 2jii_A           46 LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIP  120 (352)
T ss_dssp             EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCC
T ss_pred             EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCcc
Confidence            4577999999999999985          578999986543     46889999999999999998              


Q ss_pred             -EEEEEEe-CCeeeEEEeccCCCCHHHHhcCC--CCCCccchHHHH-----------------HHhhhcceeecccCCCc
Q 016850          152 -LLGACVS-GNCGYLVYEHVSGANLADCLRNP--RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGS  210 (381)
Q Consensus       152 -l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~  210 (381)
                       +++++.. ++..++||||+ +|+|.+++...  ....+..+..++                 ++|+|+|||++.++.  
T Consensus       121 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~--  197 (352)
T 2jii_A          121 TCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQ--  197 (352)
T ss_dssp             CCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEE--
T ss_pred             chhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCC--
Confidence             6777776 78899999999 99999999875  445544443333                 256699999987631  


Q ss_pred             cceEEcccccccccccCCCC---ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc
Q 016850          211 LCAKICHFGTAELCGEVSGN---ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID  287 (381)
Q Consensus       211 ~~~kl~DFG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~  287 (381)
                      ..+||+|||+++.+......   .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......  
T Consensus       198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--  275 (352)
T 2jii_A          198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT--  275 (352)
T ss_dssp             EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH--
T ss_pred             ceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH--
Confidence            27999999999875432111   1112244589999999999998899999999999999999999999997532110  


Q ss_pred             cccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                          ........... ....   .+...   ......+++.+.+|+.+||+.||.+||++.+|++.|++++.+..
T Consensus       276 ----~~~~~~~~~~~-~~~~---~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          276 ----EDIMKQKQKFV-DKPG---PFVGP---CGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             ----HHHHHHHHHHH-HSCC---CEECT---TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ----HHHHHHHHhcc-CChh---hhhhh---ccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence                01111111111 0000   00000   00011245789999999999999999999999999999987643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=290.18  Aligned_cols=252  Identities=17%  Similarity=0.162  Sum_probs=156.2

Q ss_pred             ccccccCCCceEEEEEEC----CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEeccC
Q 016850           97 AKKFTSSSASASWRGTIR----GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHVS  170 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~~  170 (381)
                      +++||+|+||.||+|++.    +..||+|++...  .....+.+|+.+|++|+|||||++++++..  ...+||||||++
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~  103 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE  103 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence            568999999999999974    678999986533  234578899999999999999999999964  778999999995


Q ss_pred             CCCHHHHhcCCC---------CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccccccccc
Q 016850          171 GANLADCLRNPR---------NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       171 ~gsL~~~l~~~~---------~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                       |+|.+++....         .++...+..+                 |+||+|+|||+...+..++.+||+|||+++.+
T Consensus       104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence             79988886321         2333332222                 23567999999554334477999999999875


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccc-cchhHHHHHHHHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGY-RRVSVVDKASEAV  302 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~-~~~~~~~~~~~~~  302 (381)
                      .... .........+||+.|+|||++.+. .++.++|||||||++|||++|++||........... ........+...+
T Consensus       183 ~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~  261 (405)
T 3rgf_A          183 NSPL-KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM  261 (405)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHH
T ss_pred             CCCC-cccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhh
Confidence            4211 111234557899999999998874 589999999999999999999999975433211000 0011111111111


Q ss_pred             cCCc-cchhhh------------hcccccCCC---------CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGV-GGVRKW------------VDRRLKDSY---------PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~-~~~~~~------------~~~~~~~~~---------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .... ..+..+            +........         ....++.+.+||.+||+.||.+|||+.|+++
T Consensus       262 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             CCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000 000000            000000000         0011467899999999999999999999865

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=3.1e-36  Score=282.64  Aligned_cols=257  Identities=14%  Similarity=0.183  Sum_probs=178.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEe--------CCeee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVS--------GNCGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~--------~~~~~  163 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......  ....+.+|+++|++++|||||++++++.+        .+.++
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~  100 (351)
T 3mi9_A           21 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY  100 (351)
T ss_dssp             EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEE
T ss_pred             EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEE
Confidence            3577999999999999984  789999987554332  35678899999999999999999999987        45689


Q ss_pred             EEEeccCCCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccc
Q 016850          164 LVYEHVSGANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCG  225 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~  225 (381)
                      +||||++ |+|.+.+... .......+..++                 +||+|+|||++.+    +.+||+|||+++.+.
T Consensus       101 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~----~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          101 LVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD----GVLKLADFGLARAFS  175 (351)
T ss_dssp             EEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECC
T ss_pred             EEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC----CCEEEccchhccccc
Confidence            9999996 6888887664 344444433332                 2566999999876    569999999998765


Q ss_pred             cCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          226 EVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       226 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                      ..............||+.|+|||++.+ ..++.++|||||||++|||++|++||......        ............
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~  247 (351)
T 3mi9_A          176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--------HQLALISQLCGS  247 (351)
T ss_dssp             CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCC
T ss_pred             ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCC
Confidence            433333344456789999999998876 45899999999999999999999999743221        111111111111


Q ss_pred             Cccch-hhh-----hcc---c--ccCCCCH-----HHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhc
Q 016850          305 GVGGV-RKW-----VDR---R--LKDSYPV-----EVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKI  368 (381)
Q Consensus       305 ~~~~~-~~~-----~~~---~--~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~  368 (381)
                      ..... ...     ...   .  .......     ..++.+.+||.+||+.||++|||+.|+++         +.|....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~---------hp~f~~~  318 (351)
T 3mi9_A          248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN---------HDFFWSD  318 (351)
T ss_dssp             CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT---------SGGGGSS
T ss_pred             CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC---------CCCcCCC
Confidence            00000 000     000   0  0000000     11456899999999999999999999976         5666555


Q ss_pred             CCCcce
Q 016850          369 GFPTDF  374 (381)
Q Consensus       369 ~~~~~~  374 (381)
                      .+|.+.
T Consensus       319 ~~~~~~  324 (351)
T 3mi9_A          319 PMPSDL  324 (351)
T ss_dssp             SCCCCS
T ss_pred             CCcccc
Confidence            555443

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=3.3e-36  Score=273.98  Aligned_cols=223  Identities=17%  Similarity=0.192  Sum_probs=168.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+......  ....++.+|+.++..+ +|||||++++++.+.+..++||||++
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   94 (289)
T 1x8b_A           15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN   94 (289)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecC
Confidence            4578999999999999995  88999998765332  2467788999999999 99999999999999999999999999


Q ss_pred             CCCHHHHhcCC----CCCCccchHHHH-----------------HHhhhcceeecccCC---------------CccceE
Q 016850          171 GANLADCLRNP----RNPSFTVLSTWL-----------------SRMQSSSIIVSEENA---------------GSLCAK  214 (381)
Q Consensus       171 ~gsL~~~l~~~----~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~---------------~~~~~k  214 (381)
                      +|+|.+++...    ...+...+..++                 ++|+|+||+++.++.               ....+|
T Consensus        95 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~k  174 (289)
T 1x8b_A           95 GGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK  174 (289)
T ss_dssp             TCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEE
T ss_pred             CCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEE
Confidence            99999999764    334444333322                 256699999985431               235699


Q ss_pred             EcccccccccccCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchh
Q 016850          215 ICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVS  293 (381)
Q Consensus       215 l~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~  293 (381)
                      |+|||++.....        .....||+.|+|||++.+. .++.++|||||||++|+|++|.+++....           
T Consensus       175 l~Dfg~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----------  235 (289)
T 1x8b_A          175 IGDLGHVTRISS--------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----------  235 (289)
T ss_dssp             ECCCTTCEETTC--------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----------
T ss_pred             EcccccccccCC--------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----------
Confidence            999999987532        1224599999999998765 56789999999999999999998764210           


Q ss_pred             HHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          294 VVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...   ..            ........+..+++.+.+|+.+||+.||.+|||+.++++
T Consensus       236 ~~~---~~------------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          236 QWH---EI------------RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHH---HH------------HTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHH---HH------------HcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            000   00            111112233445678999999999999999999999975

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=6.7e-36  Score=281.97  Aligned_cols=233  Identities=10%  Similarity=0.076  Sum_probs=175.4

Q ss_pred             cccccccCCCceEEEEE-----E--CCceEEEEEecccccccHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGT-----I--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~-----~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||.||+|.     .  .++.||+|+....   ...++.+|++++.+++   |+||+++++++...+..|||
T Consensus        69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv  145 (365)
T 3e7e_A           69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLV  145 (365)
T ss_dssp             EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEE
T ss_pred             EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEE
Confidence            34679999999999994     2  4789999987543   3567888888888886   99999999999999999999


Q ss_pred             EeccCCCCHHHHhcC-----CCCCCccchHHH-----------------HHHhhhcceeeccc-------CCCccceEEc
Q 016850          166 YEHVSGANLADCLRN-----PRNPSFTVLSTW-----------------LSRMQSSSIIVSEE-------NAGSLCAKIC  216 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~-----~~~~~~~~~~~~-----------------~~~l~~~Nill~~~-------~~~~~~~kl~  216 (381)
                      ||||++|+|.++|..     ....++..+..+                 |+||||+|||++..       ...++.+||+
T Consensus       146 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~  225 (365)
T 3e7e_A          146 GELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI  225 (365)
T ss_dssp             ECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC
T ss_pred             EeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe
Confidence            999999999999973     334444333332                 23567999999871       1112679999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      |||+++.+...  .........+||+.|+|||++.+..++.++|||||||++|||++|+.||.........         
T Consensus       226 DFG~a~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---------  294 (365)
T 3e7e_A          226 DLGQSIDMKLF--PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK---------  294 (365)
T ss_dssp             CCTTCEEGGGS--CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---------
T ss_pred             eCchhhhhhcc--CCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee---------
Confidence            99999765321  1223345678999999999999999999999999999999999999999643221000         


Q ss_pred             HHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCC-CChHHHHHHHHHHHHHh
Q 016850          297 KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR-PDMRQVTGLVSKMYLES  361 (381)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~~~~~~  361 (381)
                                      ....+. ..+  ..+.+.+++..||+.+|.+| |++.++.+.|++++.+.
T Consensus       295 ----------------~~~~~~-~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          295 ----------------PEGLFR-RLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             ----------------ECSCCT-TCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ----------------echhcc-ccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence                            000011 111  25678899999999999999 67889999999988763

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.9e-36  Score=281.94  Aligned_cols=234  Identities=12%  Similarity=0.136  Sum_probs=157.9

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEE--------eCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACV--------SGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~--------~~~~~~l  164 (381)
                      ..+.||+|+||.||+|++  .++.||+|++........+.+.+|+.++.++. |||||++++++.        ....+++
T Consensus        32 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~l  111 (337)
T 3ll6_A           32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL  111 (337)
T ss_dssp             EEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEE
T ss_pred             EEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEE
Confidence            357799999999999998  47899999876555556678999999999996 999999999994        3455899


Q ss_pred             EEeccCCCCHHHHhcC---CCCCCccchH-------------------HHHHHhhhcceeecccCCCccceEEccccccc
Q 016850          165 VYEHVSGANLADCLRN---PRNPSFTVLS-------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~---~~~~~~~~~~-------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      ||||++ |+|.+++..   ........+.                   .+|+||+|+|||++.+    +.+||+|||+++
T Consensus       112 v~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~----~~~kl~Dfg~~~  186 (337)
T 3ll6_A          112 LTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ----GTIKLCDFGSAT  186 (337)
T ss_dssp             EEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTT----SCEEBCCCTTCB
T ss_pred             EEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCC----CCEEEecCccce
Confidence            999995 899998864   3334433322                   2334566888888876    569999999998


Q ss_pred             ccccCCCCc--------cccccccCCCccccchhhh---cCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccc
Q 016850          223 LCGEVSGNE--------SGKVNKIEGTRGYMAPEFQ---ASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRR  291 (381)
Q Consensus       223 ~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~  291 (381)
                      .+.......        ........||+.|+|||++   .+..++.++|||||||++|||++|+.||.......      
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------  260 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------  260 (337)
T ss_dssp             CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------
Confidence            754321111        0111245699999999988   56678999999999999999999999996322110      


Q ss_pred             hhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          292 VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                                          ..........+...+..+.+|+.+||+.||.+||++.|+++.|+.+...
T Consensus       261 --------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          261 --------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             -------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                                0111111111222345688999999999999999999999999998764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-36  Score=282.69  Aligned_cols=240  Identities=16%  Similarity=0.166  Sum_probs=168.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-----cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-----DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+.......     ..+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus        14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   93 (346)
T 1ua2_A           14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   93 (346)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEc
Confidence            4578999999999999985  788999987543222     124688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ++ |+|.+++.... ......+..+                 |+||+|+||+++.+    +.+||+|||+++.+..    
T Consensus        94 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~----~~~kl~Dfg~a~~~~~----  164 (346)
T 1ua2_A           94 ME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN----GVLKLADFGLAKSFGS----  164 (346)
T ss_dssp             CS-EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECCCGGGSTTTS----
T ss_pred             CC-CCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCC----CCEEEEecccceeccC----
Confidence            96 59999987754 3343333322                 23566999999876    5699999999987532    


Q ss_pred             ccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC-ccc
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG-VGG  308 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  308 (381)
                      .........||+.|+|||++.+. .++.++|||||||++|||++|.+||.....        .............. ...
T Consensus       165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~--------~~~~~~i~~~~~~~~~~~  236 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD--------LDQLTRIFETLGTPTEEQ  236 (346)
T ss_dssp             CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCCCCTTT
T ss_pred             CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHHHcCCCChhh
Confidence            12233456799999999998764 589999999999999999999999864321        11111111111000 000


Q ss_pred             hh------hhhcccccCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VR------KWVDRRLKDSYP-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~------~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +.      +.+.....+..+     ..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            00      000000001111     234578999999999999999999999865

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=5.8e-36  Score=291.29  Aligned_cols=243  Identities=16%  Similarity=0.180  Sum_probs=177.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCC-CCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHH-SSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|++.  ++.||||+......  ..++.+|+++++.|+| ++|+.+..++.+.+..+|||||+ ++
T Consensus        11 i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~   87 (483)
T 3sv0_A           11 LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GP   87 (483)
T ss_dssp             CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CC
Confidence            4678999999999999975  88999998654433  3468899999999976 56667777777888999999999 99


Q ss_pred             CHHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeec---ccCCCccceEEcccccccccccCCCCc
Q 016850          173 NLADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVS---EENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       173 sL~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~---~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|.+++.. ...+.+..+..++                 +||||+|||+.   ..    +.+||+|||+++.+.......
T Consensus        88 sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~----~~vkL~DFGla~~~~~~~~~~  163 (483)
T 3sv0_A           88 SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA----NQVYIIDFGLAKKYRDTSTHQ  163 (483)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGT----TCEEECCCTTCEECBCTTTCC
T ss_pred             CHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCC----CeEEEEeCCcceeccCCcccc
Confidence            99999974 3345544443332                 25679999994   33    669999999998764322111


Q ss_pred             ---cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          232 ---SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       232 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                         ........||+.|+|||++.+..++.++|||||||++|||++|+.||........     ............   ..
T Consensus       164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-----~~~~~~i~~~~~---~~  235 (483)
T 3sv0_A          164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-----KQKYEKISEKKV---AT  235 (483)
T ss_dssp             BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-----HHHHHHHHHHHH---HS
T ss_pred             ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-----HHHHHHHhhccc---cc
Confidence               1122367899999999999999999999999999999999999999975433211     111111111000   00


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          309 VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ...    .+    ...+++++.+|+.+||+.||++||++.+|++.|++++.+.
T Consensus       236 ~~~----~l----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          236 SIE----AL----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             CHH----HH----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cHH----HH----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            000    00    1123568999999999999999999999999999998764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.3e-36  Score=277.50  Aligned_cols=237  Identities=18%  Similarity=0.232  Sum_probs=165.6

Q ss_pred             cccccccCCCceEEEEEEC---Cc--eEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR---GK--DVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~--~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.   ++  .||+|+.....   ....+.+.+|++++++++||||+++++++.+.+ .++|||
T Consensus        22 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e  100 (291)
T 1u46_A           22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTE  100 (291)
T ss_dssp             EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEE
T ss_pred             eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEe
Confidence            3567999999999999863   22  57887765432   224678899999999999999999999988765 889999


Q ss_pred             ccCCCCHHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          168 HVSGANLADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       168 ~~~~gsL~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |+++|+|.+++... .......+..++                 .+|+|+||+++.+    ..+||+|||++....... 
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~----~~~kl~Dfg~~~~~~~~~-  175 (291)
T 1u46_A          101 LAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR----DLVKIGDFGLMRALPQND-  175 (291)
T ss_dssp             CCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET----TEEEECCCTTCEECCC-C-
T ss_pred             cccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCC----CCEEEccccccccccccc-
Confidence            99999999999764 233433332222                 2456899999876    569999999998753311 


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                      ..........+|+.|+|||++.+..++.++||||||+++|+|++ |+.||.....           .+.....       
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----------~~~~~~~-------  237 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----------SQILHKI-------  237 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHHHH-------
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----------HHHHHHH-------
Confidence            11112334568889999999988889999999999999999999 9999964321           1111111       


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          309 VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                          .........+..++..+.+++.+||+.||.+||++.++++.|+++..+
T Consensus       238 ----~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          238 ----DKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             ----HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             ----HccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence                111111223345667899999999999999999999999999987543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3.1e-37  Score=292.39  Aligned_cols=215  Identities=13%  Similarity=0.104  Sum_probs=159.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHH---HHhhcCCCCcceEE-------EEEEeCCe
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLS---VICRSHHSSLIKLL-------GACVSGNC  161 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~---il~~l~h~nIv~l~-------~~~~~~~~  161 (381)
                      .+.||+|+||.||+|++.  ++.||||++...   .....+.+.+|++   +|++++|||||+++       +++.+.+.
T Consensus        78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~  157 (377)
T 3byv_A           78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK  157 (377)
T ss_dssp             EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred             cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence            467999999999999974  889999997643   2234678999994   55556899999998       77766542


Q ss_pred             -----------------eeEEEeccCCCCHHHHhcCCCCCCc-------cchHHH-----------------HHHhhhcc
Q 016850          162 -----------------GYLVYEHVSGANLADCLRNPRNPSF-------TVLSTW-----------------LSRMQSSS  200 (381)
Q Consensus       162 -----------------~~lv~e~~~~gsL~~~l~~~~~~~~-------~~~~~~-----------------~~~l~~~N  200 (381)
                                       .||||||+ +|+|.+++........       ..+..+                 |+||||+|
T Consensus       158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~N  236 (377)
T 3byv_A          158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD  236 (377)
T ss_dssp             CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence                             78999999 6899999986433322       222212                 23567999


Q ss_pred             eeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCC-----------CCCcchhHHHHHHHHH
Q 016850          201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-----------VVTQKCDVYAFGVVVL  269 (381)
Q Consensus       201 ill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDIwSlGvil~  269 (381)
                      ||++.+    +.+||+|||+++...       ......+| +.|+|||++.+.           .++.++|||||||++|
T Consensus       237 Ill~~~----~~~kL~DFG~a~~~~-------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~  304 (377)
T 3byv_A          237 IVLDQR----GGVFLTGFEHLVRDG-------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY  304 (377)
T ss_dssp             EEECTT----CCEEECCGGGCEETT-------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred             EEEcCC----CCEEEEechhheecC-------CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence            999876    569999999998632       13345678 999999999877           8999999999999999


Q ss_pred             HHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH
Q 016850          270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ  349 (381)
Q Consensus       270 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e  349 (381)
                      ||++|+.||........                      ...+.. .     ...+++.+.+||.+||+.||.+||++.+
T Consensus       305 elltg~~Pf~~~~~~~~----------------------~~~~~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e  356 (377)
T 3byv_A          305 WIWCADLPITKDAALGG----------------------SEWIFR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQ  356 (377)
T ss_dssp             HHHHSSCCC------CC----------------------SGGGGS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred             HHHHCCCCCcccccccc----------------------hhhhhh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence            99999999964322110                      000000 0     1234568999999999999999999999


Q ss_pred             HHH
Q 016850          350 VTG  352 (381)
Q Consensus       350 vl~  352 (381)
                      +++
T Consensus       357 ~l~  359 (377)
T 3byv_A          357 AME  359 (377)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=9.6e-36  Score=274.85  Aligned_cols=226  Identities=19%  Similarity=0.272  Sum_probs=168.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+....  ...+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus        33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  110 (314)
T 3com_A           33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGS  110 (314)
T ss_dssp             EEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred             hheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCC
Confidence            3567999999999999986  788999987543  345789999999999999999999999999999999999999999


Q ss_pred             HHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.. ........+..++                 .+|+|.||+++.+    +.+||+|||++.....    .....
T Consensus       111 L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~----~~~~~  182 (314)
T 3com_A          111 VSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE----GHAKLADFGVAGQLTD----TMAKR  182 (314)
T ss_dssp             HHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----CCEEECCCTTCEECBT----TBSCB
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCC----CCEEEeecccchhhhh----hcccc
Confidence            9999973 3344443333322                 2456999999876    5699999999976532    11223


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..++.++||||||+++|+|++|+.||.....           ..........          .
T Consensus       183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~----------~  241 (314)
T 3com_A          183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----------MRAIFMIPTN----------P  241 (314)
T ss_dssp             CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHS----------C
T ss_pred             CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----------HHHHHHHhcC----------C
Confidence            456799999999999988999999999999999999999999963211           0111111100          0


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..++..+.+|+.+||+.||.+||++.++++
T Consensus       242 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          242 PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0011123345678999999999999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=4.5e-36  Score=275.44  Aligned_cols=228  Identities=14%  Similarity=0.205  Sum_probs=167.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.  ++.|++|+.........+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus        23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  102 (302)
T 2j7t_A           23 IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGA  102 (302)
T ss_dssp             EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEE
T ss_pred             ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCc
Confidence            3567999999999999996  77899998776666677899999999999999999999999999999999999999999


Q ss_pred             HHHHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.. ....+...+..++                 .+|+|+||+++.+    +.+||+|||++.....    .....
T Consensus       103 l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~----~~~~~  174 (302)
T 2j7t_A          103 VDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE----GDIRLADFGVSAKNLK----TLQKR  174 (302)
T ss_dssp             HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT----SCEEECCCHHHHHHHH----HHHC-
T ss_pred             HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCC----CCEEEEECCCCccccc----ccccc
Confidence            9999875 3334444333332                 2456999999876    5599999999764311    11122


Q ss_pred             cccCCCccccchhhh-----cCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          236 NKIEGTRGYMAPEFQ-----ASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~-----~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ....||+.|+|||++     .+..++.++||||||+++|+|++|+.||.....           ...........     
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~~~~-----  238 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----------MRVLLKIAKSD-----  238 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHSC-----
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-----------HHHHHHHhccC-----
Confidence            345799999999988     356789999999999999999999999864221           11111111110     


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ......+..++..+.+|+.+||+.||.+|||+.++++
T Consensus       239 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          239 -----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             -----CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             -----CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                 0001123345678999999999999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.6e-35  Score=268.25  Aligned_cols=224  Identities=17%  Similarity=0.257  Sum_probs=165.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.....   ....+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   94 (276)
T 2h6d_A           15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS   94 (276)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence            3577999999999999985  8899999875432   2246789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++..........+..++                 .+|+|.||+++.+    +.+||+|||++.....     ..
T Consensus        95 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~~l~dfg~~~~~~~-----~~  165 (276)
T 2h6d_A           95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAH----MNAKIADFGLSNMMSD-----GE  165 (276)
T ss_dssp             SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTT----SCEEECCCCGGGCCCC-------
T ss_pred             CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCC----CCEEEeecccccccCC-----Cc
Confidence            99999999876555544433332                 2456999999876    5699999999976532     11


Q ss_pred             cccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||.....        .....    .+..        
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~----~~~~--------  225 (276)
T 2h6d_A          166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--------PTLFK----KIRG--------  225 (276)
T ss_dssp             -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH----HHHH--------
T ss_pred             ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHHH----Hhhc--------
Confidence            2334578999999999987765 6899999999999999999999963211        01111    1100        


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         . ....+..++..+.+++.+||+.||.+|||+.++++
T Consensus       226 ---~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          226 ---G-VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             ---C-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---C-cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence               0 01123345678999999999999999999999976

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.3e-36  Score=290.25  Aligned_cols=235  Identities=16%  Similarity=0.193  Sum_probs=160.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|++.  ++.||||++....    ....+|+++|++|+|||||+++++|...      ..+++||||
T Consensus        59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~  134 (420)
T 1j1b_A           59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  134 (420)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence            567999999999999994  7899999875432    2345799999999999999999998642      236799999


Q ss_pred             cCCCCHHHHhcC----CCCCCccchHH-------H----------HHHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          169 VSGANLADCLRN----PRNPSFTVLST-------W----------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       169 ~~~gsL~~~l~~----~~~~~~~~~~~-------~----------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      ++ ++|.+++..    ...++...+..       .          |+||||+|||++.++   ..+||+|||+++.+.. 
T Consensus       135 ~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~---~~~kl~DFG~a~~~~~-  209 (420)
T 1j1b_A          135 VP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT---AVLKLCDFGSAKQLVR-  209 (420)
T ss_dssp             CC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTT---TEEEECCCTTCEECCT-
T ss_pred             cc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCC---CeEEeccchhhhhccc-
Confidence            96 577766642    33344332222       2          235679999998543   4689999999987532 


Q ss_pred             CCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                          ........||+.|+|||++.+. .++.++|||||||++|||++|++||......        .....+........
T Consensus       210 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--------~~l~~i~~~lg~p~  277 (420)
T 1j1b_A          210 ----GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--------DQLVEIIKVLGTPT  277 (420)
T ss_dssp             ----TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCSCC
T ss_pred             ----CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCC
Confidence                1122346789999999998764 7899999999999999999999999743211        11111111110000


Q ss_pred             -cchhh-------hhcccccC-----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 -GGVRK-------WVDRRLKD-----SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 -~~~~~-------~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       +.+..       +.-+.+..     .++...++++.+||.+||+.||.+||++.|+++
T Consensus       278 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence             00000       00000000     012234678999999999999999999999864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.7e-35  Score=274.27  Aligned_cols=231  Identities=20%  Similarity=0.254  Sum_probs=167.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--------ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--------LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||||++.....        .....+.+|+++|++++||||+++++++...+ .++|
T Consensus        14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv   92 (322)
T 2ycf_A           14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV   92 (322)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred             EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence            4678999999999999985  68899998754321        12345889999999999999999999987665 8999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+++|+|.+++..........+..++.                 +|+|+||+++..+ .+..+||+|||+++....  
T Consensus        93 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-~~~~~kl~Dfg~~~~~~~--  169 (322)
T 2ycf_A           93 LELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-EDCLIKITDFGHSKILGE--  169 (322)
T ss_dssp             EECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS-SSCCEEECCCTTCEECCC--
T ss_pred             EecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC-CCCeEEEccCccceeccc--
Confidence            99999999999998876666554433322                 4568999987643 124699999999987532  


Q ss_pred             CCccccccccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                         ........||+.|+|||++.   ...++.++|||||||++|+|++|+.||.......       .+......   + 
T Consensus       170 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~---~-  235 (322)
T 2ycf_A          170 ---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-------SLKDQITS---G-  235 (322)
T ss_dssp             ---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-------CHHHHHHH---T-
T ss_pred             ---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-------HHHHHHHh---C-
Confidence               12234567999999999874   4678999999999999999999999996432210       11111100   0 


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...        ..+..+..+++.+.+|+.+||+.||.+||++.++++
T Consensus       236 ~~~--------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          236 KYN--------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CCC--------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccc--------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            000        000001124578999999999999999999999984

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=9.1e-37  Score=283.25  Aligned_cols=240  Identities=12%  Similarity=0.127  Sum_probs=163.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|+..  ++.||+|++...... ....+.+|+++|++++|||||++++++.+.+..++||||++ |
T Consensus         6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~   84 (324)
T 3mtl_A            6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K   84 (324)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred             EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence            4578999999999999985  788999987554332 12245679999999999999999999999999999999996 7


Q ss_pred             CHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.... ......+..++                 ++|+|+||+++.+    +.+||+|||+++....    ....
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~----~~~kl~Dfg~a~~~~~----~~~~  156 (324)
T 3mtl_A           85 DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER----GELKLADFGLARAKSI----PTKT  156 (324)
T ss_dssp             EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTT----CCEEECSSSEEECC----------
T ss_pred             CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCC----CCEEEccCcccccccC----Cccc
Confidence            9999987654 34433333322                 2556899999876    5699999999976432    1223


Q ss_pred             ccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cchhhh
Q 016850          235 VNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGVRKW  312 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  312 (381)
                      .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......        .............. ..+...
T Consensus       157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~~~~~~  228 (324)
T 3mtl_A          157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--------EQLHFIFRILGTPTEETWPGI  228 (324)
T ss_dssp             ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCTTTSTTG
T ss_pred             cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCChHhchhh
Confidence            345678999999999876 56899999999999999999999999643221        11111111111000 000000


Q ss_pred             hc---------ccccCC----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 VD---------RRLKDS----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 ~~---------~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..         +.....    ....+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            00         000000    01234678999999999999999999999975

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=9.3e-37  Score=282.18  Aligned_cols=239  Identities=16%  Similarity=0.240  Sum_probs=170.2

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|.+.+ .+++|++.....  ...+.+.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus        37 ~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~  115 (319)
T 2y4i_B           37 IGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT  115 (319)
T ss_dssp             CCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred             EeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence            35779999999999999876 488888755432  234568889999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC-cccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN-ESGK  234 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~~~  234 (381)
                      |.+++.... ......+..++                 .+|+|+||++++     ..+||+|||+++........ ....
T Consensus       116 L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~-----~~~~l~Dfg~~~~~~~~~~~~~~~~  190 (319)
T 2y4i_B          116 LYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN-----GKVVITDFGLFSISGVLQAGRREDK  190 (319)
T ss_dssp             HHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-------CCEECCCSCCC----------CCS
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeC-----CCEEEeecCCccccccccccccccc
Confidence            999998754 34444333322                 245688999874     45999999998764321111 1122


Q ss_pred             ccccCCCccccchhhhcC---------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          235 VNKIEGTRGYMAPEFQAS---------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~---------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                      .....||+.|+|||++.+         ..++.++|||||||++|||++|+.||.....           .........+ 
T Consensus       191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----------~~~~~~~~~~-  258 (319)
T 2y4i_B          191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA-----------EAIIWQMGTG-  258 (319)
T ss_dssp             CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH-----------HHHHHHHHTT-
T ss_pred             cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHhccC-
Confidence            344569999999999864         3578999999999999999999999964221           0111111110 


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                                ......+..++..+.+|+.+||..||.+|||+.++++.|+.+..+..
T Consensus       259 ----------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          259 ----------MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             ----------CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             ----------CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence                      00111112345679999999999999999999999999998876644

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.6e-35  Score=278.61  Aligned_cols=245  Identities=18%  Similarity=0.130  Sum_probs=160.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~lv  165 (381)
                      ..+.||+|+||.||+|...  ++.||||++.....  ...+.+.+|+.+++.++|||||++++++...+      ..|+|
T Consensus        29 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv  108 (371)
T 2xrw_A           29 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV  108 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEE
T ss_pred             EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEE
Confidence            3567999999999999885  78899998754322  24567889999999999999999999998654      78999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ |+|.+++...  .....+..+                 |+||+|+|||++.+    +.+||+|||+++....  
T Consensus       109 ~e~~~-~~l~~~~~~~--~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~----~~~kl~Dfg~a~~~~~--  179 (371)
T 2xrw_A          109 MELMD-ANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTAGT--  179 (371)
T ss_dssp             EECCS-EEHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECCCCC--------
T ss_pred             EEcCC-CCHHHHHhhc--cCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCC----CCEEEEEeeccccccc--
Confidence            99996 6899988643  333332222                 23567999999876    5699999999976432  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcc-------cccchhHH----HH
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID-------GYRRVSVV----DK  297 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~-------~~~~~~~~----~~  297 (381)
                         ........||+.|+|||++.+..++.++|||||||++|||++|+.||.........       ..+.....    ..
T Consensus       180 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          180 ---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred             ---ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence               12234567999999999999989999999999999999999999999743221000       00000000    00


Q ss_pred             HHHHHcCC----ccchhhhhcccccCCC---CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          298 ASEAVAGG----VGGVRKWVDRRLKDSY---PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       298 ~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........    ...+...+.....+..   +...+..+.+|+.+||+.||.+|||+.|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            00000000    0001111111111111   1234778999999999999999999999965

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-36  Score=281.81  Aligned_cols=226  Identities=17%  Similarity=0.279  Sum_probs=162.1

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe------CCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVS------GNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~------~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|++  .++.||+|+..... ...+.+.+|+.+++++ +||||+++++++..      .+.+++||
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~  106 (326)
T 2x7f_A           28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVM  106 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEE
T ss_pred             EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEE
Confidence            356799999999999999  47889999875433 3457899999999999 89999999999987      56789999


Q ss_pred             eccCCCCHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          167 EHVSGANLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      ||+++|+|.+++....  ......+..++                 .+|+|+||+++.+    +.+||+|||++..... 
T Consensus       107 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~----~~~kl~Dfg~~~~~~~-  181 (326)
T 2x7f_A          107 EFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN----AEVKLVDFGVSAQLDR-  181 (326)
T ss_dssp             ECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT----CCEEECCCTTTC-----
T ss_pred             EcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCC----CCEEEeeCcCceecCc-
Confidence            9999999999998642  33333322222                 2456999999876    5699999999976532 


Q ss_pred             CCCccccccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHH
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAV  302 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  302 (381)
                         .........||+.|+|||++.     +..++.++|||||||++|+|++|+.||.....           ........
T Consensus       182 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~~  247 (326)
T 2x7f_A          182 ---TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----------MRALFLIP  247 (326)
T ss_dssp             ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHH
T ss_pred             ---CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----------HHHHHHhh
Confidence               112234467999999999987     56789999999999999999999999953211           01111111


Q ss_pred             cCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          303 AGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..           ......+..+++.+.+||.+||..||.+||++.++++
T Consensus       248 ~~-----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          248 RN-----------PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HS-----------CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cC-----------ccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            00           0011112234678999999999999999999999976

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.1e-36  Score=286.04  Aligned_cols=229  Identities=11%  Similarity=0.023  Sum_probs=153.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc---ccHHHHHHHHHHHhhc--CCCCcceEE-------EEEEeC---
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---LDLEQLRERLSVICRS--HHSSLIKLL-------GACVSG---  159 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---~~~~~~~~E~~il~~l--~h~nIv~l~-------~~~~~~---  159 (381)
                      .+.||+|+||.||+|++.  ++.||+|++.....   ...+.+.+|+.+++.|  +|||||+++       +++...   
T Consensus        67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~  146 (371)
T 3q60_A           67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQP  146 (371)
T ss_dssp             EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSC
T ss_pred             eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCC
Confidence            567999999999999985  78899999876543   2456778886655555  699988765       555433   


Q ss_pred             --------------CeeeEEEeccCCCCHHHHhcCCC-CCCcc-------------chHHH----------HHHhhhcce
Q 016850          160 --------------NCGYLVYEHVSGANLADCLRNPR-NPSFT-------------VLSTW----------LSRMQSSSI  201 (381)
Q Consensus       160 --------------~~~~lv~e~~~~gsL~~~l~~~~-~~~~~-------------~~~~~----------~~~l~~~Ni  201 (381)
                                    ..+|||||||+ |+|.+++.... .....             +++..          |+||||+||
T Consensus       147 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NI  225 (371)
T 3q60_A          147 PFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNL  225 (371)
T ss_dssp             SSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGE
T ss_pred             CeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHE
Confidence                          34899999998 99999998632 11211             11111          236679999


Q ss_pred             eecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCcccc
Q 016850          202 IVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVLK  279 (381)
Q Consensus       202 ll~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf~  279 (381)
                      |++.+    +.+||+|||+++....       ......||+.|+|||++.+  ..++.++|||||||++|||++|+.||.
T Consensus       226 ll~~~----~~~kL~DFG~a~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          226 FIMPD----GRLMLGDVSALWKVGT-------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             EECTT----SCEEECCGGGEEETTC-------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             EECCC----CCEEEEecceeeecCC-------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence            99876    5699999999986431       1224557799999999987  679999999999999999999999997


Q ss_pred             ccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          280 FVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .........+...               .................+++.+.+||.+||+.||++|||+.++++
T Consensus       295 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          295 LVTPGIKGSWKRP---------------SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             BCCTTCTTCCCBC---------------CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CcCcccccchhhh---------------hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            5433211110000               000000111111112355778999999999999999999999964

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.2e-35  Score=272.18  Aligned_cols=228  Identities=15%  Similarity=0.198  Sum_probs=171.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc---------ccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS---------LDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~---------~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~  163 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++.....         ...+.+.+|+++|+++. ||||+++++++.+.+..+
T Consensus        21 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~  100 (298)
T 1phk_A           21 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF  100 (298)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEE
Confidence            3567999999999999985  68899998765431         12466889999999995 999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEccccccccccc
Q 016850          164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      +||||+++|+|.+++......+...+..++.                 +|+|.||+++.+    +.+||+|||++..+..
T Consensus       101 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~  176 (298)
T 1phk_A          101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD----MNIKLTDFGFSCQLDP  176 (298)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCTTCEECCT
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCC----CcEEEecccchhhcCC
Confidence            9999999999999998765555444433332                 456999999876    5699999999987532


Q ss_pred             CCCCccccccccCCCccccchhhhc------CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQA------SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                           ........|++.|+|||++.      ...++.++||||||+++|+|++|+.||.....           ......
T Consensus       177 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----------~~~~~~  240 (298)
T 1phk_A          177 -----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----------MLMLRM  240 (298)
T ss_dssp             -----TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHH
T ss_pred             -----CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-----------HHHHHH
Confidence                 12234567999999999875      45688999999999999999999999963211           111111


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...+.         ..........++..+.+|+.+||+.||.+||++.++++
T Consensus       241 ~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          241 IMSGN---------YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHTC---------CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhcCC---------cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            11100         00111112345678999999999999999999999965

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-35  Score=280.23  Aligned_cols=235  Identities=18%  Similarity=0.193  Sum_probs=162.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~lv~  166 (381)
                      .+.||+|+||.||+|.+.  ++.||||++.....  ...+++.+|+++|++++|||||++++++...+      .+|+||
T Consensus        30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~  109 (367)
T 1cm8_A           30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM  109 (367)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred             eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence            567999999999999984  88999998744322  23567899999999999999999999998653      469999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHH-------H----------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTW-------L----------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~-------~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+ +++|.+++... ......+..+       +          ++|+|+||+++.+    +.+||+|||+++....   
T Consensus       110 e~~-~~~L~~~~~~~-~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~----~~~kl~Dfg~a~~~~~---  180 (367)
T 1cm8_A          110 PFM-GTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED----CELKILDFGLARQADS---  180 (367)
T ss_dssp             ECC-SEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEECCS---
T ss_pred             ecC-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCC----CCEEEEeeeccccccc---
Confidence            999 89999999763 3443333222       2          2566888888876    5699999999987432   


Q ss_pred             CccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                          .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||......        .....+..........
T Consensus       181 ----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~l~~i~~~~g~~~~~  248 (367)
T 1cm8_A          181 ----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--------DQLKEIMKVTGTPPAE  248 (367)
T ss_dssp             ----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCCCCHH
T ss_pred             ----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhcCCCCHH
Confidence                2345678999999998877 67999999999999999999999999743211        1111111111000000


Q ss_pred             h---------hhh---hccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 V---------RKW---VDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~---------~~~---~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      +         ..+   +.....   .......++.+.+|+.+||+.||.+|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            0         000   000000   0112345678999999999999999999999876

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=4.9e-35  Score=271.98  Aligned_cols=243  Identities=13%  Similarity=0.148  Sum_probs=168.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEe--CCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVS--GNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~--~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+...   ...+.+.+|+++|++++ ||||+++++++.+  ....++||||++
T Consensus        40 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~  116 (330)
T 3nsz_A           40 LVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN  116 (330)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCC
T ss_pred             EEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccC
Confidence            3577999999999999874  78999998653   34578999999999997 9999999999997  677899999999


Q ss_pred             CCCHHHHhcCCCCCCccchHH-------H----------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLST-------W----------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~-------~----------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +++|.+++..   .....+..       .          |+||+|+|||++.++   ..+||+|||+++....     ..
T Consensus       117 ~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~---~~~kl~Dfg~a~~~~~-----~~  185 (330)
T 3nsz_A          117 NTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH---RKLRLIDWGLAEFYHP-----GQ  185 (330)
T ss_dssp             CCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---TEEEECCCTTCEECCT-----TC
T ss_pred             chhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCC---CEEEEEeCCCceEcCC-----CC
Confidence            9999999864   23222222       2          235669999998653   3699999999986532     12


Q ss_pred             cccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCccccc------chhHHHHHHHHHcCCc
Q 016850          234 KVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR------RVSVVDKASEAVAGGV  306 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  306 (381)
                      ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............      .....+..........
T Consensus       186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  265 (330)
T 3nsz_A          186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  265 (330)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence            2345679999999999877 67899999999999999999999999532211000000      0000000000000000


Q ss_pred             cchhhhh--------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWV--------DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+....        ........+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0000000        001111122335788999999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.2e-35  Score=286.54  Aligned_cols=233  Identities=19%  Similarity=0.242  Sum_probs=162.6

Q ss_pred             ccccccCCCceEEEE-EECCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRG-TIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~-~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||+||.+ ...|+.||||+....   ..+.+.+|+++|+++ +|||||++++++.+.+.+|||||||+ |+|
T Consensus        20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL   95 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL   95 (434)
T ss_dssp             EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred             cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence            467999999999654 446899999987543   245678999999987 89999999999999999999999995 799


Q ss_pred             HHHhcCCCCCCc--------------cchHHHH----------HHhhhcceeecccC---------CCccceEEcccccc
Q 016850          175 ADCLRNPRNPSF--------------TVLSTWL----------SRMQSSSIIVSEEN---------AGSLCAKICHFGTA  221 (381)
Q Consensus       175 ~~~l~~~~~~~~--------------~~~~~~~----------~~l~~~Nill~~~~---------~~~~~~kl~DFG~a  221 (381)
                      .+++........              .+++..+          +||+|+|||++..+         ..+..+||+|||++
T Consensus        96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a  175 (434)
T 2rio_A           96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC  175 (434)
T ss_dssp             HHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTC
T ss_pred             HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccc
Confidence            999987543211              1122222          25669999997642         23467999999999


Q ss_pred             cccccCCCCccccccccCCCccccchhhhcC-------CCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchh
Q 016850          222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-------GVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVS  293 (381)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~  293 (381)
                      +.+...............||+.|+|||++.+       ..++.++|||||||++|||++ |+.||......         
T Consensus       176 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---------  246 (434)
T 2rio_A          176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---------  246 (434)
T ss_dssp             EECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---------
T ss_pred             eecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---------
Confidence            8764322111222345679999999999875       568999999999999999999 99999532110         


Q ss_pred             HHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          294 VVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      . .   ....+. ..     .+......+..+++++.+||.+||+.||.+|||+.+|++
T Consensus       247 ~-~---~i~~~~-~~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          247 E-S---NIIRGI-FS-----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             H-H---HHHHTC-CC-----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H-H---HHhcCC-CC-----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            0 0   011000 00     011112234577899999999999999999999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.8e-35  Score=276.91  Aligned_cols=245  Identities=16%  Similarity=0.175  Sum_probs=156.7

Q ss_pred             HHhcCC-cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe-----
Q 016850           90 AATNNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNC-----  161 (381)
Q Consensus        90 ~~~~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-----  161 (381)
                      ...+.| ..+.||+|+||.||+|++.  ++.||||+..... .......+|++.+..++|||||++++++...+.     
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~   98 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD   98 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence            344455 4678999999999999985  7889999874432 234567788888999999999999999975433     


Q ss_pred             --eeEEEeccCCCCHHHHhc----CCCCCCccchH-------------------HHHHHhhhcceeecccCCCccceEEc
Q 016850          162 --GYLVYEHVSGANLADCLR----NPRNPSFTVLS-------------------TWLSRMQSSSIIVSEENAGSLCAKIC  216 (381)
Q Consensus       162 --~~lv~e~~~~gsL~~~l~----~~~~~~~~~~~-------------------~~~~~l~~~Nill~~~~~~~~~~kl~  216 (381)
                        +++||||++ |+|.+.+.    .........+.                   .+|+||+|+|||++..+   +.+||+
T Consensus        99 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~---~~~kl~  174 (360)
T 3e3p_A           99 IYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD---GTLKLC  174 (360)
T ss_dssp             EEEEEEEECCS-CBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTT---TEEEEC
T ss_pred             eeEEEEeeccc-ccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCC---CcEEEe
Confidence              789999997 46555443    33333322221                   22346779999998622   679999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |||+++.+..     ........||+.|+|||++.+. .++.++|||||||++|||++|+.||......        ...
T Consensus       175 Dfg~a~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--------~~~  241 (360)
T 3e3p_A          175 DFGSAKKLSP-----SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--------GQL  241 (360)
T ss_dssp             CCTTCBCCCT-----TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHH
T ss_pred             eCCCceecCC-----CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--------HHH
Confidence            9999987532     1223356789999999988765 4899999999999999999999999643221        111


Q ss_pred             HHHHHHHcCCccchhhhhcc----------------cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          296 DKASEAVAGGVGGVRKWVDR----------------RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...................+                ......+...++.+.+|+.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          242 HEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            11111110000000000000                0001112235778999999999999999999999975

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=2.9e-35  Score=283.34  Aligned_cols=175  Identities=17%  Similarity=0.218  Sum_probs=139.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc------CCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS------HHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l------~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.  ++.||||++... .....++.+|+.+++.+      .|+||+++++++...+.+++|||
T Consensus       101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e  179 (429)
T 3kvw_A          101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFE  179 (429)
T ss_dssp             EEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEEC
T ss_pred             EEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEe
Confidence            3567999999999999885  688999987542 22346788899998887      57799999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCC--CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          168 HVSGANLADCLRNPRN--PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~--~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |+. |+|.+++.....  ..+..+..++                 +||||+|||++.++.  ..+||+|||+++....  
T Consensus       180 ~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~--~~vkL~DFG~a~~~~~--  254 (429)
T 3kvw_A          180 LLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR--SGIKVIDFGSSCYEHQ--  254 (429)
T ss_dssp             CCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTS--CCEEECCCTTCEETTC--
T ss_pred             ccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCC--cceEEeecccceecCC--
Confidence            995 799999976543  4433332222                 356799999987632  3499999999976321  


Q ss_pred             CCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCcccccc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFV  281 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~  281 (381)
                           .....+||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus       255 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          255 -----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             -----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence                 233467999999999999999999999999999999999999999753

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=1.7e-35  Score=269.75  Aligned_cols=230  Identities=17%  Similarity=0.202  Sum_probs=173.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+......  ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus        26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  105 (287)
T 2wei_A           26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTG  105 (287)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCC
Confidence            4678999999999999985  78899998754332  3578899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      ++|.+++..........+..++.                 +|+|+||+++..+ .+..+||+|||++......     ..
T Consensus       106 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~-~~~~~kL~Dfg~~~~~~~~-----~~  179 (287)
T 2wei_A          106 GELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE-KDCDIKIIDFGLSTCFQQN-----TK  179 (287)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS-TTCCEEECSTTGGGTBCCC-----SS
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC-CcccEEEeccCcceeecCC-----Cc
Confidence            99999987666565554443332                 4569999997642 1256999999999865321     12


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||.....        .....   ....+..        
T Consensus       180 ~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~---~~~~~~~--------  239 (287)
T 2wei_A          180 MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--------YDILK---RVETGKY--------  239 (287)
T ss_dssp             CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHH---HHHHCCC--------
T ss_pred             cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--------HHHHH---HHHcCCC--------
Confidence            233458999999998875 589999999999999999999999964221        01111   1111100        


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .........+++.+.+|+.+||+.||.+|||+.++++
T Consensus       240 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          240 -AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             -CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence             0000011234678999999999999999999999976

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.1e-35  Score=278.51  Aligned_cols=236  Identities=12%  Similarity=0.176  Sum_probs=170.4

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEeccccccc-----------------HHHHHHHHHHHhhcCCCCcceEEEEEEe
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLD-----------------LEQLRERLSVICRSHHSSLIKLLGACVS  158 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~-----------------~~~~~~E~~il~~l~h~nIv~l~~~~~~  158 (381)
                      ..+.||+|+||.||+|.+.++.||+|+........                 .+.+.+|++++++++||||+++++++.+
T Consensus        35 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~  114 (348)
T 2pml_X           35 IIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN  114 (348)
T ss_dssp             EEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred             EEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence            35679999999999999999999999875433221                 1789999999999999999999999999


Q ss_pred             CCeeeEEEeccCCCCHHHH------hcC--CCCCCccchHHH------------------HHHhhhcceeecccCCCccc
Q 016850          159 GNCGYLVYEHVSGANLADC------LRN--PRNPSFTVLSTW------------------LSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       159 ~~~~~lv~e~~~~gsL~~~------l~~--~~~~~~~~~~~~------------------~~~l~~~Nill~~~~~~~~~  212 (381)
                      .+..++||||+++|+|.++      +..  ....+...+..+                  |.+|+|+||+++.+    +.
T Consensus       115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~----~~  190 (348)
T 2pml_X          115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN----GR  190 (348)
T ss_dssp             SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT----SC
T ss_pred             CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC----Cc
Confidence            9999999999999999999      655  334443332222                  22455888888776    56


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCC-CCCc-chhHHHHHHHHHHHHhCCccccccccCCccccc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQ-KCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~  290 (381)
                      +||+|||++.....      .......||+.|+|||++.+. .++. ++|||||||++|||++|+.||......      
T Consensus       191 ~kl~dfg~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------  258 (348)
T 2pml_X          191 VKLSDFGESEYMVD------KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL------  258 (348)
T ss_dssp             EEECCCTTCEECBT------TEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS------
T ss_pred             EEEecccccccccc------ccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH------
Confidence            99999999987532      134456799999999999877 6666 999999999999999999999743220      


Q ss_pred             chhHHHHHHHHHcCCccchh----hhh---cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVR----KWV---DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       .....    .+......+.    .+.   ...........+++.+.+|+.+||+.||.+||++.|+++
T Consensus       259 -~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          259 -VELFN----NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             -HHHHH----HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -HHHHH----HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             01111    1111000000    000   000000011345678999999999999999999999975

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.2e-35  Score=279.91  Aligned_cols=250  Identities=18%  Similarity=0.218  Sum_probs=168.1

Q ss_pred             HHHHHHHhcCC-cccccccCCCceEEEEEEC-CceEEEEEecccccc-----------cHHHHHHHHHHHhhcCCCCcce
Q 016850           85 LSEICAATNNF-LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL-----------DLEQLRERLSVICRSHHSSLIK  151 (381)
Q Consensus        85 ~~~~~~~~~~f-~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~-----------~~~~~~~E~~il~~l~h~nIv~  151 (381)
                      +.++....+.| ..+.||+|+||.||+|... +..||||++......           ..+.+.+|+++|++++|||||+
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   93 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG   93 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence            55666677777 4678899999999999875 788999987543221           2378999999999999999999


Q ss_pred             EEEEEEe-----CCeeeEEEeccCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCC
Q 016850          152 LLGACVS-----GNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENA  208 (381)
Q Consensus       152 l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~  208 (381)
                      +++++..     ...+|+||||++ |+|.+++.... ......+..++                 ++|+|+||+++.+  
T Consensus        94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~--  170 (362)
T 3pg1_A           94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN--  170 (362)
T ss_dssp             CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT--
T ss_pred             eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCC--
Confidence            9999854     346899999996 79999887654 34433333322                 2566999999876  


Q ss_pred             CccceEEcccccccccccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID  287 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~  287 (381)
                        +.+||+|||+++....     ........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......   
T Consensus       171 --~~~kl~Dfg~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---  240 (362)
T 3pg1_A          171 --NDITICDFNLAREDTA-----DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY---  240 (362)
T ss_dssp             --CCEEECCTTC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---
T ss_pred             --CCEEEEecCccccccc-----ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH---
Confidence              5599999999975322     222345679999999998876 67899999999999999999999999643211   


Q ss_pred             cccchhHHHHHHHHHcCC---------ccchhhhhcccccC---C----CCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          288 GYRRVSVVDKASEAVAGG---------VGGVRKWVDRRLKD---S----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~---~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                           .............         .......+......   .    .....++.+.+|+.+||+.||.+|||+.|++
T Consensus       241 -----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  315 (362)
T 3pg1_A          241 -----NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL  315 (362)
T ss_dssp             -----HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             -----HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence                 1111111111000         00000111111100   0    1123457799999999999999999999987


Q ss_pred             H
Q 016850          352 G  352 (381)
Q Consensus       352 ~  352 (381)
                      +
T Consensus       316 ~  316 (362)
T 3pg1_A          316 R  316 (362)
T ss_dssp             T
T ss_pred             c
Confidence            5

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.6e-35  Score=270.14  Aligned_cols=226  Identities=13%  Similarity=0.152  Sum_probs=154.0

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||.||+|.+  .++.||+|+.......  ..+.+.++...++.++||||+++++++.+.+..++||||++ 
T Consensus        11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-   89 (290)
T 3fme_A           11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-   89 (290)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred             hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence            356799999999999998  4889999987554322  22334445556888899999999999999999999999996 


Q ss_pred             CCHHHHhcC----CCCCCccchHHH------------------HHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          172 ANLADCLRN----PRNPSFTVLSTW------------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       172 gsL~~~l~~----~~~~~~~~~~~~------------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |+|.+++..    ....++..+..+                  |++|+|+||+++.+    ..+||+|||+++....   
T Consensus        90 ~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~---  162 (290)
T 3fme_A           90 TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL----GQVKMCDFGISGYLVD---  162 (290)
T ss_dssp             EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTT----CCEEBCCC-----------
T ss_pred             cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCC----CCEEEeecCCcccccc---
Confidence            698887753    334443333222                  23456888888876    5699999999976532   


Q ss_pred             CccccccccCCCccccchhhh----cCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          230 NESGKVNKIEGTRGYMAPEFQ----ASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                        ........||+.|+|||++    .+..++.++|||||||++|+|++|+.||.....          .........   
T Consensus       163 --~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----------~~~~~~~~~---  227 (290)
T 3fme_A          163 --DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----------PFQQLKQVV---  227 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC----------HHHHHHHHH---
T ss_pred             --cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc----------hHHHHHHHh---
Confidence              1223345799999999996    456789999999999999999999999963211          111111111   


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ........+..+++.+.+|+.+||+.||++|||+.|+++
T Consensus       228 --------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          228 --------EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             --------HSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --------ccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence                    111111122345678999999999999999999999977

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.7e-36  Score=276.81  Aligned_cols=239  Identities=17%  Similarity=0.279  Sum_probs=153.0

Q ss_pred             cccccccCCCceEEEEEE--CCceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||.||+|.+  .++.||+|+...... ...+.+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus        19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   98 (303)
T 2vwi_A           19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG   98 (303)
T ss_dssp             EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred             hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence            457799999999999987  478899998654332 24567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcC--------CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          173 NLADCLRN--------PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       173 sL~~~l~~--------~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      +|.+++..        ....+...+..++                 .+|+|+||+++.+    +.+||+|||++..+...
T Consensus        99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~----~~~kl~dfg~~~~~~~~  174 (303)
T 2vwi_A           99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGED----GSVQIADFGVSAFLATG  174 (303)
T ss_dssp             BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTT----CCEEECCCHHHHHCC--
T ss_pred             chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCC----CCEEEEeccchheeccC
Confidence            99999973        2234433333222                 2456999999876    56999999999765321


Q ss_pred             CC-CccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          228 SG-NESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       228 ~~-~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                      .. ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......        .   .........
T Consensus       175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~---~~~~~~~~~  243 (303)
T 2vwi_A          175 GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--------K---VLMLTLQND  243 (303)
T ss_dssp             -------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------G---HHHHHHTSS
T ss_pred             CCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--------h---HHHHHhccC
Confidence            11 11122345679999999998875 56899999999999999999999999643221        0   011111111


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........   ........+++.+.+|+.+||+.||.+||++.++++
T Consensus       244 ~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          244 PPSLETGV---QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             CCCTTC--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCcccccc---ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            11110000   001112234567999999999999999999999975

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.9e-35  Score=272.80  Aligned_cols=227  Identities=17%  Similarity=0.263  Sum_probs=165.2

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccc--cHHHHHHHHHHHhhcC--CCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSL--DLEQLRERLSVICRSH--HSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||.||+|.+. ++.||+|++......  ..+.+.+|++++++++  ||||+++++++.+.+..++|||+. +
T Consensus        33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  111 (313)
T 3cek_A           33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECG-N  111 (313)
T ss_dssp             EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCC-S
T ss_pred             EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecC-C
Confidence            567999999999999986 778999987654322  4578899999999996  599999999999999999999954 8


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++..........+..++                 ++|+|+||++++     +.+||+|||+++.....  .....
T Consensus       112 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-----~~~kL~Dfg~~~~~~~~--~~~~~  184 (313)
T 3cek_A          112 IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-----GMLKLIDFGIANQMQPD--TTSVV  184 (313)
T ss_dssp             EEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-----TEEEECCCSSSCC-----------
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-----CeEEEeeccccccccCc--ccccc
Confidence            9999999877666544433332                 245689999864     45999999999865321  11112


Q ss_pred             ccccCCCccccchhhhcC-----------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          235 VNKIEGTRGYMAPEFQAS-----------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~-----------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      .....||+.|+|||++.+           ..++.++|||||||++|||++|+.||.....          ....      
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~----------~~~~------  248 (313)
T 3cek_A          185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----------QISK------  248 (313)
T ss_dssp             -----CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS----------HHHH------
T ss_pred             ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH----------HHHH------
Confidence            345679999999999875           4688999999999999999999999963221          0111      


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           +....+......++...+..+.+|+.+||+.||.+||++.|+++
T Consensus       249 -----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          249 -----LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             -----HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----HHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence                 11112222222333334578999999999999999999999975

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.3e-35  Score=278.99  Aligned_cols=239  Identities=17%  Similarity=0.203  Sum_probs=163.9

Q ss_pred             cCC-cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe-----------
Q 016850           93 NNF-LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS-----------  158 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----------  158 (381)
                      +.| ..+.||+|+||.||+|++.  ++.||+|++.....    ...+|+++|+.++|||||++++++..           
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            344 4578999999999999984  78999998754322    23479999999999999999999854           


Q ss_pred             ---------------------------CCeeeEEEeccCCCCHHHHhcC----CCCCCccchHHHH--------------
Q 016850          159 ---------------------------GNCGYLVYEHVSGANLADCLRN----PRNPSFTVLSTWL--------------  193 (381)
Q Consensus       159 ---------------------------~~~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~~--------------  193 (381)
                                                 ...+++||||++ |+|.+.+..    ....+...+..++              
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g  161 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG  161 (383)
T ss_dssp             ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence                                       334889999997 687777653    4445444333322              


Q ss_pred             ---HHhhhcceeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHH
Q 016850          194 ---SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVL  269 (381)
Q Consensus       194 ---~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~  269 (381)
                         +||+|+||+++..+   +.+||+|||+++.+..     ........||+.|+|||++.+. .++.++|||||||++|
T Consensus       162 i~H~Dikp~Nil~~~~~---~~~kl~Dfg~a~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          162 ICHRDIKPQNLLVNSKD---NTLKLCDFGSAKKLIP-----SEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             EECSCCCGGGEEEETTT---TEEEECCCTTCEECCT-----TSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             CccCccCHHHEEEcCCC---CcEEEEECCCCcccCC-----CCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence               35669999997422   5699999999987532     1223456789999999988765 4899999999999999


Q ss_pred             HHHhCCccccccccCCcccccchhHHHHHHHHHcCCc--------cchhh-----hhcccccCCCCHHHHHHHHHHHHHh
Q 016850          270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV--------GGVRK-----WVDRRLKDSYPVEVAEKMVLLGLQC  336 (381)
Q Consensus       270 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~c  336 (381)
                      ||++|++||......        ..............        .....     +........++..+++.+.+|+.+|
T Consensus       234 ell~g~~pf~~~~~~--------~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  305 (383)
T 3eb0_A          234 ELILGKPLFSGETSI--------DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI  305 (383)
T ss_dssp             HHHHSSCSSCCSSHH--------HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCChH--------HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence            999999999743221        11111111110000        00000     0000011112334567899999999


Q ss_pred             hccCCCCCCChHHHHH
Q 016850          337 VDEDPGKRPDMRQVTG  352 (381)
Q Consensus       337 l~~dP~~RPs~~evl~  352 (381)
                      |+.||.+|||+.|+++
T Consensus       306 L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          306 LRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCSSGGGSCCHHHHHT
T ss_pred             ccCChhhCCCHHHHhc
Confidence            9999999999999974

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=6.7e-35  Score=268.00  Aligned_cols=226  Identities=13%  Similarity=0.144  Sum_probs=164.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc----cccHHHHHHHHHHHhhcCCCCcceEEEEEE--eCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR----SLDLEQLRERLSVICRSHHSSLIKLLGACV--SGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.....    ....+.+.+|++++++++||||+++++++.  +.+..++|||
T Consensus         9 i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (305)
T 2wtk_C            9 MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVME   88 (305)
T ss_dssp             CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEE
T ss_pred             EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEeh
Confidence            5678999999999999984  6789999875432    234678999999999999999999999984  4567899999


Q ss_pred             ccCCCCHHHHhcCC--CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          168 HVSGANLADCLRNP--RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       168 ~~~~gsL~~~l~~~--~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |+++| |.+++...  ...+...+..++                 ++|+|+||+++.+    +.+||+|||++...... 
T Consensus        89 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~----~~~kl~dfg~~~~~~~~-  162 (305)
T 2wtk_C           89 YCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG----GTLKISALGVAEALHPF-  162 (305)
T ss_dssp             CCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCTTCEECCTT-
T ss_pred             hccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCC----CcEEeeccccccccCcc-
Confidence            99765 77777653  233333332222                 2456889998876    56999999999875321 


Q ss_pred             CCccccccccCCCccccchhhhcCCC--CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                       ..........||+.|+|||++.+..  ++.++||||||+++|||++|+.||.....           .........   
T Consensus       163 -~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~i~~---  227 (305)
T 2wtk_C          163 -AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----------YKLFENIGK---  227 (305)
T ss_dssp             -CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHH---
T ss_pred             -ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----------HHHHHHHhc---
Confidence             1222334567999999999987643  47899999999999999999999963211           111111100   


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              .  ....+..+++.+.+|+.+||+.||.+||++.|+++
T Consensus       228 --------~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          228 --------G--SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             --------C--CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             --------C--CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                    0  11223345678999999999999999999999975

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.9e-35  Score=270.38  Aligned_cols=243  Identities=16%  Similarity=0.208  Sum_probs=163.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEE--------------eC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV--------------SG  159 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--------------~~  159 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++........+.+.+|++++++++||||+++++++.              +.
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~   94 (320)
T 2i6l_A           15 DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTEL   94 (320)
T ss_dssp             EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSC
T ss_pred             EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccccc
Confidence            3567999999999999996  7899999877655556778999999999999999999999874              34


Q ss_pred             CeeeEEEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccccccc
Q 016850          160 NCGYLVYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      +..++||||++ |+|.+++.... .....+..++                 ++|+|+||+++..+   ..+||+|||+++
T Consensus        95 ~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~---~~~kl~Dfg~~~  169 (320)
T 2i6l_A           95 NSVYIVQEYME-TDLANVLEQGP-LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED---LVLKIGDFGLAR  169 (320)
T ss_dssp             SEEEEEEECCS-EEHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT---TEEEECCCTTCB
T ss_pred             CceeEEeeccC-CCHHHHhhcCC-ccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC---CeEEEccCcccc
Confidence            67899999996 79999997643 3433332222                 25669999997433   579999999998


Q ss_pred             ccccCCCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH
Q 016850          223 LCGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA  301 (381)
Q Consensus       223 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~  301 (381)
                      ...... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......        .........
T Consensus       170 ~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~~~~~~~~  240 (320)
T 2i6l_A          170 IMDPHY-SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--------EQMQLILES  240 (320)
T ss_dssp             CC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHH
T ss_pred             ccCCCc-ccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHh
Confidence            753211 11122344568999999998765 67899999999999999999999999643211        111111000


Q ss_pred             HcCCc--------cchhhhhccccc-CC-----CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          302 VAGGV--------GGVRKWVDRRLK-DS-----YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       302 ~~~~~--------~~~~~~~~~~~~-~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....        ..+......... ..     ....++..+.+|+.+||+.||.+|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            00000        000000000000 00     11235678999999999999999999999965

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1e-34  Score=273.70  Aligned_cols=242  Identities=16%  Similarity=0.184  Sum_probs=168.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.  +..||+|+....... ..+.+.+|+++|++++|||||++++++...     ...++|||
T Consensus        31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e  110 (364)
T 3qyz_A           31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQD  110 (364)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred             EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEc
Confidence            3567999999999999985  778999987543322 457789999999999999999999999764     46899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |++ |+|.+++.... .....+..++                 +||+|+|||++.+    +.+||+|||+++...... .
T Consensus       111 ~~~-~~L~~~l~~~~-~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~----~~~kl~Dfg~a~~~~~~~-~  183 (364)
T 3qyz_A          111 LME-TDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT----CDLKICDFGLARVADPDH-D  183 (364)
T ss_dssp             CCS-EEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEECCGGG-C
T ss_pred             ccC-cCHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCC----CCEEEEeCcceEecCCCC-C
Confidence            996 79999997643 4433333222                 2566999999876    569999999998754311 1


Q ss_pred             ccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc-
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG-  308 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  308 (381)
                      .........||+.|+|||++.+ ..++.++|||||||++|+|++|++||......        ................ 
T Consensus       184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~~  255 (364)
T 3qyz_A          184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--------DQLNHILGILGSPSQED  255 (364)
T ss_dssp             BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG--------GHHHHHHHHHCSCCHHH
T ss_pred             ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHHHhCCCCHHH
Confidence            1122345689999999998654 45899999999999999999999999643221        1111111111000000 


Q ss_pred             --------hhhhhcc-cccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 --------VRKWVDR-RLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 --------~~~~~~~-~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ....... ......     ...+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    0000000 000001     1234578999999999999999999999975

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2e-35  Score=278.74  Aligned_cols=236  Identities=19%  Similarity=0.196  Sum_probs=151.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC------CeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSG------NCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||||++.....  ...+++.+|+++|+.++|||||++++++...      ...|+|
T Consensus        33 ~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv  112 (367)
T 2fst_X           33 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV  112 (367)
T ss_dssp             EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred             EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEE
Confidence            3567999999999999874  78899998754322  2457788999999999999999999998754      568999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||+ +++|.+++... ......+..++                 ++|+|+|||++.+    +.+||+|||+++....  
T Consensus       113 ~e~~-~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~----~~~kL~DFG~a~~~~~--  184 (367)
T 2fst_X          113 THLM-GADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKILDFGLARHTAD--  184 (367)
T ss_dssp             EECC-CEECC-----C-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECC-----------
T ss_pred             eccc-CCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCC----CCEEEeeccccccccc--
Confidence            9999 79999998763 34433333222                 3566999999876    5699999999976432  


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                           ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....        ......+.........
T Consensus       185 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~l~~i~~~~g~p~~  251 (367)
T 2fst_X          185 -----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--------IDQLKLILRLVGTPGA  251 (367)
T ss_dssp             -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHHHCSCCH
T ss_pred             -----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHhCCCCH
Confidence                 2345679999999999876 6789999999999999999999999974321        1111111111110000


Q ss_pred             c---------hhhhhcccc-cCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 G---------VRKWVDRRL-KDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ~---------~~~~~~~~~-~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .         ...++..-. .+..     ....++.+.+|+.+||+.||.+|||+.|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            0         000000000 0000     1123577999999999999999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.4e-35  Score=283.95  Aligned_cols=230  Identities=17%  Similarity=0.216  Sum_probs=159.9

Q ss_pred             ccccccCCCceE-EEEEECCceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASAS-WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V-~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||+| |++...++.||||++.....   ..+.+|+++|+++ +|||||++++++.+.+..|||||||+ |+|
T Consensus        29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L  104 (432)
T 3p23_A           29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL  104 (432)
T ss_dssp             EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred             CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence            467999999985 56666799999998754332   2356899999999 89999999999999999999999995 799


Q ss_pred             HHHhcCCCC-CCccc-------hHHH----------HHHhhhcceeecccC-CCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNPRN-PSFTV-------LSTW----------LSRMQSSSIIVSEEN-AGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~~~-~~~~~-------~~~~----------~~~l~~~Nill~~~~-~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+++..... .....       ++..          |+||+|+|||++..+ .++..+||+|||+++.+.... ......
T Consensus       105 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~-~~~~~~  183 (432)
T 3p23_A          105 QEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR-HSFSRR  183 (432)
T ss_dssp             HHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----------
T ss_pred             HHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC-cceeec
Confidence            999987542 22111       2222          235668999986432 233568899999998754211 111233


Q ss_pred             cccCCCccccchhhhc---CCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          236 NKIEGTRGYMAPEFQA---SGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~---~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ....||+.|+|||++.   ...++.++|||||||++|||++ |..||.....            ....... .. .    
T Consensus       184 ~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~------------~~~~~~~-~~-~----  245 (432)
T 3p23_A          184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ------------RQANILL-GA-C----  245 (432)
T ss_dssp             --CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT------------HHHHHHT-TC-C----
T ss_pred             cccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH------------HHHHHHh-cc-C----
Confidence            4577999999999987   4567889999999999999999 9999853211            0000000 00 0    


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ... ....+...+..+.+||.+||+.||.+|||+.+|++
T Consensus       246 --~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          246 --SLD-CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             --CCT-TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --Ccc-ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence              000 01112345677899999999999999999999983

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.2e-34  Score=276.06  Aligned_cols=246  Identities=16%  Similarity=0.169  Sum_probs=171.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC--------CCCcceEEEEEE----eCCe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH--------HSSLIKLLGACV----SGNC  161 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~--------h~nIv~l~~~~~----~~~~  161 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++... ....+.+.+|+.+|++++        |+||+++++++.    +...
T Consensus        41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~  119 (397)
T 1wak_A           41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTH  119 (397)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEE
T ss_pred             EEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCce
Confidence            4567999999999999885  778999987532 234577899999999995        788999999988    5668


Q ss_pred             eeEEEeccCCCCHHHHhcCCC--CCCccchHH------------------HHHHhhhcceeecccCC-------------
Q 016850          162 GYLVYEHVSGANLADCLRNPR--NPSFTVLST------------------WLSRMQSSSIIVSEENA-------------  208 (381)
Q Consensus       162 ~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~------------------~~~~l~~~Nill~~~~~-------------  208 (381)
                      +|+||||+ +|+|.+++....  ......+..                  +|+||||+|||++.++.             
T Consensus       120 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~  198 (397)
T 1wak_A          120 ICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQ  198 (397)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---
T ss_pred             EEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHh
Confidence            99999999 677777775432  344333222                  23356688888876520             


Q ss_pred             --------------------------------CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCC
Q 016850          209 --------------------------------GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVT  256 (381)
Q Consensus       209 --------------------------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  256 (381)
                                                      ....+||+|||+++....       ......||+.|+|||++.+..++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~  271 (397)
T 1wak_A          199 RSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-------HFTEDIQTRQYRSLEVLIGSGYN  271 (397)
T ss_dssp             ------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-------CSCSCCSCGGGCCHHHHHTSCCC
T ss_pred             hcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-------cCccCCCCCcccCChhhcCCCCC
Confidence                                            113699999999987532       13345799999999999998999


Q ss_pred             cchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc-------hhhhhcc--------------
Q 016850          257 QKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG-------VRKWVDR--------------  315 (381)
Q Consensus       257 ~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--------------  315 (381)
                      .++|||||||++|||++|+.||.........  ...................       ...++..              
T Consensus       272 ~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (397)
T 1wak_A          272 TPADIWSTACMAFELATGDYLFEPHSGEEYT--RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG  349 (397)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCCCCSSSC--HHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred             cHHHHHHHHHHHHHHhhCCCCCCCCcccccC--chHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence            9999999999999999999999754332211  0111111111111000000       0000000              


Q ss_pred             -----cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 -----RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 -----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ......+...++.+.+||.+||+.||++|||+.|+++
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                 0011345678889999999999999999999999975

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=3.1e-34  Score=272.20  Aligned_cols=174  Identities=21%  Similarity=0.250  Sum_probs=138.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-CC-----CcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HS-----SLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~-----nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.  ++.||||++... .....++.+|+.++..++ |+     +|+++++++...+..|||||
T Consensus        58 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e  136 (382)
T 2vx3_A           58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE  136 (382)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEE
T ss_pred             EEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEe
Confidence            3567999999999999985  778999987532 223567788999998884 55     49999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC--CCCccchH-------------------HHHHHhhhcceeecccCCCccceEEccccccccccc
Q 016850          168 HVSGANLADCLRNPR--NPSFTVLS-------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~--~~~~~~~~-------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      |++ |+|.+++....  ......+.                   .+|+||+|+|||++.++.  ..+||+|||+++....
T Consensus       137 ~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~--~~~kL~DFG~a~~~~~  213 (382)
T 2vx3_A          137 MLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR--SAIKIVDFGSSCQLGQ  213 (382)
T ss_dssp             CCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTS--CCEEECCCTTCEETTC
T ss_pred             cCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCC--CcEEEEeccCceeccc
Confidence            995 69999997653  23322222                   223467799999965322  6699999999987532


Q ss_pred             CCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccc
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKF  280 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~  280 (381)
                             ......||+.|+|||++.+..++.++|||||||++|||++|++||..
T Consensus       214 -------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          214 -------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             -------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                   22346799999999999998999999999999999999999999974

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.3e-34  Score=275.96  Aligned_cols=236  Identities=14%  Similarity=0.155  Sum_probs=159.3

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~lv~e~  168 (381)
                      ..+.||+|+||.||+|++. ++.+|+|++.....    ...+|+++|+.++|||||++++++...+      .+++||||
T Consensus        44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~  119 (394)
T 4e7w_A           44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY  119 (394)
T ss_dssp             EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred             EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence            3567999999999999995 66788888754332    2347999999999999999999996533      37899999


Q ss_pred             cCCCCHHHHhc----CCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          169 VSGANLADCLR----NPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       169 ~~~gsL~~~l~----~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      +++ +|.+.+.    .....+...+..+                 |+||+|+|||++..+   +.+||+|||+++.+.. 
T Consensus       120 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~---~~~kL~DFG~a~~~~~-  194 (394)
T 4e7w_A          120 VPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPS---GVLKLIDFGSAKILIA-  194 (394)
T ss_dssp             CSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT---TEEEECCCTTCEECCT-
T ss_pred             cCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCC---CcEEEeeCCCcccccC-
Confidence            975 5544433    2334443333222                 235679999998322   6799999999987532 


Q ss_pred             CCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                          ........||+.|+|||++.+. .++.++|||||||++|||++|++||......        ..............
T Consensus       195 ----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--------~~l~~i~~~~g~p~  262 (394)
T 4e7w_A          195 ----GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI--------DQLVEIIKVLGTPS  262 (394)
T ss_dssp             ----TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCCCC
T ss_pred             ----CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCC
Confidence                1123356789999999988764 5899999999999999999999999743211        11111111110000


Q ss_pred             cchhhhhccc--------cc-----CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRR--------LK-----DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~--------~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ........+.        ..     ..++..+++++.+|+.+||+.||.+|||+.|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          263 REQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            0000000000        00     0112235678999999999999999999999865

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=7.4e-35  Score=270.58  Aligned_cols=228  Identities=18%  Similarity=0.237  Sum_probs=146.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHH-HHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLS-VICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|.+.  ++.||+|++...... ...++.+|+. +++.++||||+++++++.+.+..++||||++ |
T Consensus        27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~  105 (327)
T 3aln_A           27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-T  105 (327)
T ss_dssp             -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-C
Confidence            567999999999999996  889999987654332 3455666666 6777899999999999999999999999996 6


Q ss_pred             CHHHHhcC-----CCCCCccchHH------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          173 NLADCLRN-----PRNPSFTVLST------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       173 sL~~~l~~-----~~~~~~~~~~~------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|.+++..     ........+..                  +|++|+|+||+++.+    +.+||+|||+++....   
T Consensus       106 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~----~~~kl~Dfg~~~~~~~---  178 (327)
T 3aln_A          106 SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRS----GNIKLCDFGISGQLVD---  178 (327)
T ss_dssp             EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETT----TEEEECCCSSSCC------
T ss_pred             ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCC----CCEEEccCCCceeccc---
Confidence            88888763     33333332221                  233567899999876    5699999999976532   


Q ss_pred             CccccccccCCCccccchhhh----cCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          230 NESGKVNKIEGTRGYMAPEFQ----ASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                        ........||+.|+|||++    .+..++.++|||||||++|+|++|+.||......          .+....     
T Consensus       179 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----------~~~~~~-----  241 (327)
T 3aln_A          179 --SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV----------FDQLTQ-----  241 (327)
T ss_dssp             -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------------CC-----
T ss_pred             --ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH----------HHHHHH-----
Confidence              1122334799999999998    4567899999999999999999999999642210          000000     


Q ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 VGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                         ......+.+.......+++.+.+|+.+||+.||.+||++.++++
T Consensus       242 ---~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          242 ---VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             ---CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ---HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence               00000111111112245678999999999999999999999975

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1e-34  Score=274.48  Aligned_cols=235  Identities=17%  Similarity=0.163  Sum_probs=164.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCee------eEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCG------YLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~------~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.......  ..+.+.+|+.+++.++|||||++++++...+..      ++|
T Consensus        46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv  125 (371)
T 4exu_A           46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV  125 (371)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred             EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence            3567999999999999985  789999987653322  357788999999999999999999999877654      999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ |+|.+++...  .....+..++                 ++|+|+||+++.+    +.+||+|||+++....  
T Consensus       126 ~e~~~-~~l~~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~----~~~kL~Dfg~a~~~~~--  196 (371)
T 4exu_A          126 MPFMQ-TDLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED----CELKILDFGLARHADA--  196 (371)
T ss_dssp             EECCC-EEHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----CCEEECSTTCC-------
T ss_pred             Ecccc-ccHHHHhhcC--CCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCC----CCEEEEecCccccccc--
Confidence            99996 7999988543  4433333222                 2566999999877    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG  307 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (381)
                           ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......        ...............
T Consensus       197 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~  263 (371)
T 4exu_A          197 -----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--------DQLTQILKVTGVPGT  263 (371)
T ss_dssp             --------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCH
T ss_pred             -----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCcH
Confidence                 2345678999999999887 67899999999999999999999999643210        111111111100000


Q ss_pred             ch---------hhh---hcccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 GV---------RKW---VDRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ~~---------~~~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+         ..+   ........   ....+++.+.+||.+||+.||++|||+.|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          264 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            00         000   00000000   01234678999999999999999999999865

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.6e-34  Score=271.06  Aligned_cols=243  Identities=16%  Similarity=0.191  Sum_probs=166.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.  ++.||||+...... .....+.+|+++|++++||||+++++++...     ...++|||
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e   94 (353)
T 2b9h_A           15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQE   94 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEEC
T ss_pred             EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEe
Confidence            3567899999999999986  78899998754332 2456788999999999999999999988754     67899999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |++ |+|.+++... ......+..++                 ++|+|+||+++.+    +.+||+|||+++.+......
T Consensus        95 ~~~-~~L~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~----~~~kl~Dfg~a~~~~~~~~~  168 (353)
T 2b9h_A           95 LMQ-TDLHRVISTQ-MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSN----CDLKVCDFGLARIIDESAAD  168 (353)
T ss_dssp             CCS-EEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT----CCEEECCCTTCEECC-----
T ss_pred             ccC-ccHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCC----CcEEEEeccccccccccccc
Confidence            996 7999998764 34433332222                 2456889998876    56999999999875422111


Q ss_pred             cc------ccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          231 ES------GKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       231 ~~------~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..      .......||+.|+|||++.+ ..++.++|||||||++|+|++|++||......        ...........
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~  240 (353)
T 2b9h_A          169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--------HQLLLIFGIIG  240 (353)
T ss_dssp             -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHC
T ss_pred             ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--------HHHHHHHHHhC
Confidence            11      11234579999999998764 67899999999999999999999999743211        01111111000


Q ss_pred             CCc----------cchhhhhccccc-C-----CCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGV----------GGVRKWVDRRLK-D-----SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~----------~~~~~~~~~~~~-~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...          ....+.+..... .     .....+++.+.+|+.+||+.||++|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            000          000000000000 0     001235678999999999999999999999865

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=4.9e-34  Score=265.67  Aligned_cols=240  Identities=16%  Similarity=0.171  Sum_probs=170.4

Q ss_pred             cccccccCCCceEEEEEE---CCceEEEEEecccccccHHHHHHHHHHHhhcCCC------CcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTI---RGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS------SLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~---~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~------nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|..   .++.||+|+.... ....+.+.+|+++++.++|+      +|+++++++.+.+..++||
T Consensus        18 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~   96 (339)
T 1z57_A           18 IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVF   96 (339)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEE
T ss_pred             EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEE
Confidence            356799999999999987   3678999986532 23457788999999998665      4999999999999999999


Q ss_pred             eccCCCCHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCC---------------Cccc
Q 016850          167 EHVSGANLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENA---------------GSLC  212 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~---------------~~~~  212 (381)
                      ||+ +++|.+++....  ......+..++                 ++|+|+||+++..+.               .+..
T Consensus        97 e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~  175 (339)
T 1z57_A           97 ELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD  175 (339)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCC
T ss_pred             cCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCC
Confidence            999 899999998765  33333333222                 245689999876421               0256


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      +||+|||+++....       ......||+.|+|||++.+..++.++|||||||++|||++|+.||......        
T Consensus       176 ~kl~Dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------  240 (339)
T 1z57_A          176 IKVVDFGSATYDDE-------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK--------  240 (339)
T ss_dssp             EEECCCSSCEETTS-------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH--------
T ss_pred             ceEeeCcccccCcc-------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH--------
Confidence            99999999976422       223467999999999999889999999999999999999999999743221        


Q ss_pred             hHHHHHHHHHcCCccch-----------------------hhhh----ccc-ccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 016850          293 SVVDKASEAVAGGVGGV-----------------------RKWV----DRR-LKDSYPVEVAEKMVLLGLQCVDEDPGKR  344 (381)
Q Consensus       293 ~~~~~~~~~~~~~~~~~-----------------------~~~~----~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~R  344 (381)
                      ................+                       ...+    .+. .....+...++.+.+|+.+||+.||.+|
T Consensus       241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  320 (339)
T 1z57_A          241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR  320 (339)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence            11111111110000000                       0000    000 0011234567889999999999999999


Q ss_pred             CChHHHHH
Q 016850          345 PDMRQVTG  352 (381)
Q Consensus       345 Ps~~evl~  352 (381)
                      ||+.|+++
T Consensus       321 pt~~ell~  328 (339)
T 1z57_A          321 ITLREALK  328 (339)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99999965

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.3e-34  Score=270.20  Aligned_cols=227  Identities=15%  Similarity=0.179  Sum_probs=143.3

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHH-HHHhhcCCCCcceEEEEEEe----CCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERL-SVICRSHHSSLIKLLGACVS----GNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~-~il~~l~h~nIv~l~~~~~~----~~~~~lv~e~~~  170 (381)
                      +.||+|+||.||+|++.  ++.||+|++...     ....+|+ ..++.+.||||+++++++..    ...+++|||||+
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~  109 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME  109 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence            45899999999999996  889999986432     2233344 34566799999999999986    456899999999


Q ss_pred             CCCHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|+|.+++....  ..+...+..++                 ++|+|+||+++..+ .+..+||+|||+++....     
T Consensus       110 gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~-~~~~~kl~Dfg~~~~~~~-----  183 (336)
T 3fhr_A          110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE-KDAVLKLTDFGFAKETTQ-----  183 (336)
T ss_dssp             TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS-TTCCEEECCCTTCEEC-------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecC-CCceEEEeccccceeccc-----
Confidence            999999998764  34444333332                 24569999997632 125699999999976432     


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                       .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..........        .....+        .
T Consensus       184 -~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--------~~~~~~--------~  246 (336)
T 3fhr_A          184 -NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--------GMKRRI--------R  246 (336)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------------
T ss_pred             -cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--------hHHHhh--------h
Confidence             22345678999999999988889999999999999999999999996433221100        000000        0


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .............+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ----CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00001111112345678999999999999999999999976

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.4e-34  Score=268.46  Aligned_cols=239  Identities=15%  Similarity=0.226  Sum_probs=168.0

Q ss_pred             cccccccCCCceEEEEEEC---CceEEEEEecccccc--cHHHHHHHHHHHhhc---CCCCcceEEEEEE-----eCCee
Q 016850           96 LAKKFTSSSASASWRGTIR---GKDVIIFQRKLRRSL--DLEQLRERLSVICRS---HHSSLIKLLGACV-----SGNCG  162 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l---~h~nIv~l~~~~~-----~~~~~  162 (381)
                      ..+.||+|+||.||+|++.   ++.||+|+.......  ....+.+|+.+++.+   +||||+++++++.     .....
T Consensus        15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   94 (326)
T 1blx_A           15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   94 (326)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred             eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence            4578999999999999983   678899987543322  234577888888777   8999999999987     55678


Q ss_pred             eEEEeccCCCCHHHHhcCCCC--CCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccc
Q 016850          163 YLVYEHVSGANLADCLRNPRN--PSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       163 ~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++||||++ |+|.+++.....  .+...+..++                 ++|+|+||+++.+    +.+||+|||+++.
T Consensus        95 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~----~~~kl~Dfg~~~~  169 (326)
T 1blx_A           95 TLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS----GQIKLADFGLARI  169 (326)
T ss_dssp             EEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECSCCSCCC
T ss_pred             EEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCC----CCEEEecCccccc
Confidence            99999996 799999976432  4443333222                 2556999999876    5699999999976


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ...     ........||+.|+|||++.+..++.++|||||||++|+|++|+.||......        ...........
T Consensus       170 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~  236 (326)
T 1blx_A          170 YSF-----QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--------DQLGKILDVIG  236 (326)
T ss_dssp             CCG-----GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHC
T ss_pred             ccC-----CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHHHcC
Confidence            432     22334567999999999999889999999999999999999999999643211        11111111110


Q ss_pred             C-Cccchhh-------hhc---ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 G-GVGGVRK-------WVD---RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~-~~~~~~~-------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      . ....+..       .+.   ..........+++.+.+|+.+||+.||.+||++.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0 0000000       000   00001122345678999999999999999999999974

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=7.1e-34  Score=260.42  Aligned_cols=230  Identities=16%  Similarity=0.208  Sum_probs=159.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe-------------CC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS-------------GN  160 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-------------~~  160 (381)
                      ..+.||+|+||.||+|+..  ++.||+|+... .....+.+.+|+.++++++||||+++++++.+             .+
T Consensus        10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   88 (303)
T 1zy4_A           10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS   88 (303)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEE
T ss_pred             hhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCC
Confidence            4577999999999999984  78899998743 22345778999999999999999999998865             45


Q ss_pred             eeeEEEeccCCCCHHHHhcCCC-CCCccchHHH-------H----------HHhhhcceeecccCCCccceEEccccccc
Q 016850          161 CGYLVYEHVSGANLADCLRNPR-NPSFTVLSTW-------L----------SRMQSSSIIVSEENAGSLCAKICHFGTAE  222 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~-------~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a~  222 (381)
                      ..++||||+++|+|.+++.... ......+..+       +          .+|+|+||+++.+    +.+||+|||++.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~----~~~kl~dfg~~~  164 (303)
T 1zy4_A           89 TLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDES----RNVKIGDFGLAK  164 (303)
T ss_dssp             EEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECCCCCCS
T ss_pred             ceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCC----CCEEEeeCcchh
Confidence            6899999999999999997543 2222222222       2          2556999999876    569999999998


Q ss_pred             ccccCCC----------CccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccc
Q 016850          223 LCGEVSG----------NESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRR  291 (381)
Q Consensus       223 ~~~~~~~----------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~  291 (381)
                      .......          ..........||+.|+|||++.+. .++.++|||||||++|||++   ||....         
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---------  232 (303)
T 1zy4_A          165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---------  232 (303)
T ss_dssp             CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH---------
T ss_pred             hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch---------
Confidence            6532110          011223456799999999998764 68999999999999999998   442110         


Q ss_pred             hhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          292 VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ..... ...+..        ........++...++.+.+|+.+||+.||.+|||+.++++
T Consensus       233 -~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          233 -ERVNI-LKKLRS--------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             -HHHHH-HHHHHS--------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -hHHHH-HHhccc--------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence             11111 111111        1111223334455678999999999999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=6.6e-34  Score=267.07  Aligned_cols=235  Identities=17%  Similarity=0.143  Sum_probs=164.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe------eeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNC------GYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~------~~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||||+.......  ..+.+.+|+.++++++||||+++++++...+.      +|+|
T Consensus        28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv  107 (353)
T 3coi_A           28 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV  107 (353)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEE
T ss_pred             EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEE
Confidence            3567999999999999985  789999987543322  35678899999999999999999999987654      4999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      |||++ |+|.+++...  .+...+..++                 ++|+|+||+++.+    +.+||+|||+++....  
T Consensus       108 ~e~~~-~~l~~~~~~~--~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~----~~~kl~Dfg~~~~~~~--  178 (353)
T 3coi_A          108 MPFMQ-TDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED----CELKILDFGLARHADA--  178 (353)
T ss_dssp             EECCS-EEGGGTTTSC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTT----CCEEECSTTCTTC-----
T ss_pred             ecccc-CCHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCC----CcEEEeecccccCCCC--
Confidence            99996 7999888642  4433333222                 3566999999876    5699999999976422  


Q ss_pred             CCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-  306 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  306 (381)
                           ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......        .............. 
T Consensus       179 -----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~  245 (353)
T 3coi_A          179 -----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--------DQLTQILKVTGVPGT  245 (353)
T ss_dssp             ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH--------HHHHHHHHHHCBCCH
T ss_pred             -----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCCCCH
Confidence                 2334678999999999876 67899999999999999999999999743210        11111111100000 


Q ss_pred             -------cc----hhhhhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 -------GG----VRKWVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 -------~~----~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                             ..    +...+.....   ......+++.+.+|+.+||+.||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                   00    0000000001   1122355788999999999999999999999865

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.8e-35  Score=267.92  Aligned_cols=217  Identities=18%  Similarity=0.319  Sum_probs=163.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhc----CCCCcceEEEEEEeCCeee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRS----HHSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l----~h~nIv~l~~~~~~~~~~~  163 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+.......      ....+.+|+.++.++    +||||+++++++.+.+..+
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~  114 (312)
T 2iwi_A           35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFM  114 (312)
T ss_dssp             EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CE
T ss_pred             EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEE
Confidence            4678999999999999884  788999987544322      233466799999999    8999999999999999999


Q ss_pred             EEEec-cCCCCHHHHhcCCCCCCccchHHHHH-----------------Hhhhcceeec-ccCCCccceEEccccccccc
Q 016850          164 LVYEH-VSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVS-EENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       164 lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~-~~~~~~~~~kl~DFG~a~~~  224 (381)
                      +|||| +++++|.+++..........+..++.                 +|+|+||+++ .+    +.+||+|||++...
T Consensus       115 ~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~----~~~kl~dfg~~~~~  190 (312)
T 2iwi_A          115 LVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR----GCAKLIDFGSGALL  190 (312)
T ss_dssp             EEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTT----TEEEECCCSSCEEC
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCC----CeEEEEEcchhhhc
Confidence            99999 78999999998766565544433332                 4569999998 44    56999999999875


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      ..      .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....          .         
T Consensus       191 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~---------  245 (312)
T 2iwi_A          191 HD------EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----------I---------  245 (312)
T ss_dssp             CS------SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------H---------
T ss_pred             cc------CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----------H---------
Confidence            32      12345679999999999877666 4589999999999999999999853110          0         


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                               ...  ...++..++..+.+||.+||+.||++||++.|+++
T Consensus       246 ---------~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          246 ---------LEA--ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             ---------HHT--CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ---------hhh--ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                     000  11223345678999999999999999999999975

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=7e-35  Score=270.08  Aligned_cols=218  Identities=15%  Similarity=0.244  Sum_probs=168.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhcC--CCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRSH--HSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|++......      ..+.+.+|+.++++++  ||||+++++++.+.+..++|
T Consensus        47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv  126 (320)
T 3a99_A           47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI  126 (320)
T ss_dssp             EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEE
Confidence            3567999999999999884  788999987554322      2345778999999996  59999999999999999999


Q ss_pred             EeccCC-CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          166 YEHVSG-ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       166 ~e~~~~-gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |||+.+ ++|.+++..........+..++                 ++|+|+||+++..+   +.+||+|||+++.... 
T Consensus       127 ~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~---~~~kL~Dfg~~~~~~~-  202 (320)
T 3a99_A          127 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR---GELKLIDFGSGALLKD-  202 (320)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---TEEEECCCTTCEECCS-
T ss_pred             EEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCC---CCEEEeeCcccccccc-
Confidence            999976 8999999876665554443332                 25669999998322   5699999999987532 


Q ss_pred             CCCccccccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                           .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....                 ...   
T Consensus       203 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----------------~~~---  257 (320)
T 3a99_A          203 -----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------------IIR---  257 (320)
T ss_dssp             -----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------------HHH---
T ss_pred             -----ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-----------------hhc---
Confidence                 12334679999999999887665 6889999999999999999999953210                 000   


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              .  ....+..+++.+.+||.+||+.||++||++.++++
T Consensus       258 --------~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          258 --------G--QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             --------C--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------c--cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                    0  00112234568999999999999999999999976

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.8e-34  Score=287.47  Aligned_cols=255  Identities=17%  Similarity=0.160  Sum_probs=174.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEe------CCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVS------GNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|.+.  ++.||+|+...... ...+.+.+|+++|++++|||||++++++..      .+..++||
T Consensus        18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm   97 (676)
T 3qa8_A           18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM   97 (676)
T ss_dssp             CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred             EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence            5678999999999999984  78899998654322 246779999999999999999999999765      67789999


Q ss_pred             eccCCCCHHHHhcCCC---CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccccccccccc
Q 016850          167 EHVSGANLADCLRNPR---NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~---~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      |||++|+|.+++....   ..+...+..++                 ++|+|+||+++.++ ....+||+|||++.....
T Consensus        98 Ey~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g-~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A           98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP-QRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             ECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS-SSCEEEECSCCCCCBTTS
T ss_pred             EeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC-CceeEEEccccccccccc
Confidence            9999999999998754   34433333322                 24568899888653 235689999999987532


Q ss_pred             CCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHH-H-cC
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA-V-AG  304 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~-~~  304 (381)
                           ........||+.|+|||++.+..++.++|||||||++|+|++|..||..........  . ......... . ..
T Consensus       177 -----~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~--~-~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          177 -----GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH--G-KVREKSNEHIVVYD  248 (676)
T ss_dssp             -----CCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSS--T-TCC------CCSCC
T ss_pred             -----ccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhh--h-hhhcccchhhhhhh
Confidence                 122345679999999999999999999999999999999999999996421100000  0 000000000 0 00


Q ss_pred             Cccchhhhh-cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHH-----HHHHHHHHHH
Q 016850          305 GVGGVRKWV-DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQ-----VTGLVSKMYL  359 (381)
Q Consensus       305 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~~~~  359 (381)
                      .......+. ...........+++.+.+|+.+||..||++|||+.+     ..+.+++++.
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence            000000000 000112234567889999999999999999999998     4566666654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.2e-33  Score=266.97  Aligned_cols=244  Identities=16%  Similarity=0.202  Sum_probs=169.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-----------CCCcceEEEEEEeCC--
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-----------HSSLIKLLGACVSGN--  160 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-----------h~nIv~l~~~~~~~~--  160 (381)
                      ..+.||+|+||.||+|++.  ++.||+|+.... ....+.+.+|++++++++           ||||+++++++...+  
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  101 (373)
T 1q8y_A           23 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN  101 (373)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETT
T ss_pred             EEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCC
Confidence            4578999999999999974  788999987532 234567889999999886           899999999998654  


Q ss_pred             --eeeEEEeccCCCCHHHHhcCCC--CCCccchHH------------------HHHHhhhcceeecccC--CCccceEEc
Q 016850          161 --CGYLVYEHVSGANLADCLRNPR--NPSFTVLST------------------WLSRMQSSSIIVSEEN--AGSLCAKIC  216 (381)
Q Consensus       161 --~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~------------------~~~~l~~~Nill~~~~--~~~~~~kl~  216 (381)
                        .+++||||+ +++|.+++....  ..+...+..                  +|+||+|+|||++..+  ...+.+||+
T Consensus       102 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~  180 (373)
T 1q8y_A          102 GVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA  180 (373)
T ss_dssp             EEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEEC
T ss_pred             CceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEc
Confidence              789999999 899999997643  233332221                  2235568888885432  223579999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVD  296 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~  296 (381)
                      |||+++....       ......||+.|+|||++.+..++.++|||||||++|||++|+.||..........  ......
T Consensus       181 Dfg~a~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--~~~~~~  251 (373)
T 1q8y_A          181 DLGNACWYDE-------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK--DDDHIA  251 (373)
T ss_dssp             CCTTCEETTB-------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C--HHHHHH
T ss_pred             ccccccccCC-------CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC--hHHHHH
Confidence            9999987532       1234579999999999999899999999999999999999999997543221110  011111


Q ss_pred             HHHHHHcCCc-----------------cc-----------hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH
Q 016850          297 KASEAVAGGV-----------------GG-----------VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR  348 (381)
Q Consensus       297 ~~~~~~~~~~-----------------~~-----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~  348 (381)
                      ..........                 +.           +.....  ....++..+++.+.+||.+||+.||++|||+.
T Consensus       252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~  329 (373)
T 1q8y_A          252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT--EKYKFSKDEAKEISDFLSPMLQLDPRKRADAG  329 (373)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH--HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred             HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhh--hcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence            1111110000                 00           000000  11235678889999999999999999999999


Q ss_pred             HHHH
Q 016850          349 QVTG  352 (381)
Q Consensus       349 evl~  352 (381)
                      |+++
T Consensus       330 ell~  333 (373)
T 1q8y_A          330 GLVN  333 (373)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9975

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.5e-33  Score=258.87  Aligned_cols=226  Identities=16%  Similarity=0.255  Sum_probs=146.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc-c-HHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-D-LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~-~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.||+|+||.||+|.+.  ++.||+|+....... . .+.+.++..+++.++||||+++++++.+.+..++||||+ ++
T Consensus        30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~  108 (318)
T 2dyl_A           30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT  108 (318)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred             cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence            567999999999999995  789999987654332 2 233444555788889999999999999999999999999 56


Q ss_pred             CHHHHhcC-CCCCCccchHH------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          173 NLADCLRN-PRNPSFTVLST------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       173 sL~~~l~~-~~~~~~~~~~~------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      .+..++.. ....+...+..                  +|.+|+|+||+++.+    +.+||+|||++..+..     ..
T Consensus       109 ~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~----~~~kl~dfg~~~~~~~-----~~  179 (318)
T 2dyl_A          109 CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER----GQIKLCDFGISGRLVD-----DK  179 (318)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTT----SCEEECCCTTC------------
T ss_pred             cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCC----CCEEEEECCCchhccC-----Cc
Confidence            66665543 23333332221                  223566889999876    5699999999976432     11


Q ss_pred             cccccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          234 KVNKIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                      ......||+.|+|||++.     ...++.++|||||||++|||++|+.||.....          ..+.........   
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----------~~~~~~~~~~~~---  246 (318)
T 2dyl_A          180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----------DFEVLTKVLQEE---  246 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----------HHHHHHHHHHSC---
T ss_pred             cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----------cHHHHHHHhccC---
Confidence            233457999999999984     45688999999999999999999999964211          111111111110   


Q ss_pred             hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           .+..  .....+++.+.+|+.+||+.||.+||++.++++
T Consensus       247 -----~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 -----PPLL--PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             -----CCCC--CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -----CCCC--CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                 0001  111234678999999999999999999999976

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=5e-33  Score=260.62  Aligned_cols=240  Identities=13%  Similarity=0.147  Sum_probs=168.1

Q ss_pred             cccccccCCCceEEEEEEC--C-ceEEEEEecccccccHHHHHHHHHHHhhcCCCC------cceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--G-KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSS------LIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~-~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~n------Iv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||.||+|...  + ..||+|+.... ....+.+.+|+.++++++|++      |+.+++++...+..+|||
T Consensus        23 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~  101 (355)
T 2eu9_A           23 IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAF  101 (355)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEE
T ss_pred             EEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEE
Confidence            3567999999999999984  3 57888886532 234567889999999997665      999999999999999999


Q ss_pred             eccCCCCHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccC---------------CCccc
Q 016850          167 EHVSGANLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEEN---------------AGSLC  212 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~---------------~~~~~  212 (381)
                      ||+ +|+|.+++....  ..+...+..++                 ++|+|+|||+...+               ..+..
T Consensus       102 e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  180 (355)
T 2eu9_A          102 ELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS  180 (355)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCC
T ss_pred             ecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCc
Confidence            999 678888876543  34444333332                 25669999985321               12367


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccch
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRV  292 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~  292 (381)
                      +||+|||+++....       ......||+.|+|||++.+..++.++|||||||++|||++|+.||......        
T Consensus       181 ~kl~Dfg~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------  245 (355)
T 2eu9_A          181 IRVADFGSATFDHE-------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--------  245 (355)
T ss_dssp             EEECCCTTCEETTS-------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------
T ss_pred             EEEeecCccccccc-------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------
Confidence            99999999976422       223467999999999999989999999999999999999999999743221        


Q ss_pred             hHHHHHHHHHcCCccch-----------------------hhhhccc-----ccCCCCHHHHHHHHHHHHHhhccCCCCC
Q 016850          293 SVVDKASEAVAGGVGGV-----------------------RKWVDRR-----LKDSYPVEVAEKMVLLGLQCVDEDPGKR  344 (381)
Q Consensus       293 ~~~~~~~~~~~~~~~~~-----------------------~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~dP~~R  344 (381)
                      ................+                       .......     .........+..+.+||.+||+.||++|
T Consensus       246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  325 (355)
T 2eu9_A          246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR  325 (355)
T ss_dssp             HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence            11111111110000000                       0000000     0011123457789999999999999999


Q ss_pred             CChHHHHH
Q 016850          345 PDMRQVTG  352 (381)
Q Consensus       345 Ps~~evl~  352 (381)
                      ||+.|+++
T Consensus       326 pt~~e~l~  333 (355)
T 2eu9_A          326 ITLAEALL  333 (355)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2e-33  Score=285.72  Aligned_cols=220  Identities=17%  Similarity=0.253  Sum_probs=164.2

Q ss_pred             cccccccCCCceEEEEEEC---CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCe-----eeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR---GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNC-----GYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-----~~lv~  166 (381)
                      ..+.||+|+||.||+|.+.   ++.||||+...... ...+.+.+|+++|++++|||||++++++...+.     .||||
T Consensus        84 i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~  163 (681)
T 2pzi_A           84 VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVM  163 (681)
T ss_dssp             EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEE
Confidence            4567999999999999984   67899998654332 245678899999999999999999999987655     79999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||+++++|.+++..  ..++.++..++                 +||||+|||++.+     .+||+|||+++....   
T Consensus       164 E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-----~~kl~DFG~a~~~~~---  233 (681)
T 2pzi_A          164 EYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-----QLKLIDLGAVSRINS---  233 (681)
T ss_dssp             ECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-----CEEECCCTTCEETTC---
T ss_pred             EeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-----cEEEEecccchhccc---
Confidence            99999999998865  44444433332                 3567888888774     489999999987532   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                           .....||+.|+|||++.++ ++.++|||||||++|+|++|.+||.........                      
T Consensus       234 -----~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~----------------------  285 (681)
T 2pzi_A          234 -----FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------------------  285 (681)
T ss_dssp             -----CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC----------------------
T ss_pred             -----CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc----------------------
Confidence                 1346799999999988764 489999999999999999999988632211100                      


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-hHHHHHHHHHHHHHh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-MRQVTGLVSKMYLES  361 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~~~~~~  361 (381)
                              ........++.+.+||.+||+.||.+||+ +.++...|..++.+.
T Consensus       286 --------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          286 --------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             --------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             --------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence                    00001234567999999999999999995 667777777766543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.98  E-value=3.3e-32  Score=248.07  Aligned_cols=211  Identities=13%  Similarity=0.093  Sum_probs=150.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  ++.||+|++......   ..+.+.+|+.++.+++|||||++++++.+.+..|+||||++
T Consensus        35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~  114 (286)
T 3uqc_A           35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIR  114 (286)
T ss_dssp             EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred             EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecC
Confidence            3567999999999999996  789999997654332   24778999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCc------cchHHHHH----------HhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          171 GANLADCLRNPRNPSF------TVLSTWLS----------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~------~~~~~~~~----------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +++|.+++.... ...      .++...+.          ||||+|||++++    +.+||+++                
T Consensus       115 g~~L~~~l~~~~-~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~----g~~kl~~~----------------  173 (286)
T 3uqc_A          115 GGSLQEVADTSP-SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSID----GDVVLAYP----------------  173 (286)
T ss_dssp             EEEHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETT----SCEEECSC----------------
T ss_pred             CCCHHHHHhcCC-ChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCC----CCEEEEec----------------
Confidence            999999996532 211      12222333          344666666654    33566533                


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                              .|++|       ++.++|||||||++|||++|+.||............                   .....
T Consensus       174 --------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------------------~~~~~  219 (286)
T 3uqc_A          174 --------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------------------ERDTA  219 (286)
T ss_dssp             --------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------------------CBCTT
T ss_pred             --------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------------------HHHhc
Confidence                    34443       689999999999999999999999754332100000                   00000


Q ss_pred             cccc--CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          315 RRLK--DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       315 ~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ....  ......+++.+.+|+.+||+.||++| |+.|+++.|+++.....
T Consensus       220 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          220 GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            0000  00112356789999999999999999 99999999999866543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=8.7e-33  Score=257.65  Aligned_cols=224  Identities=8%  Similarity=0.044  Sum_probs=157.6

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccc--------cccHHHHHHHHHHHhhcC---------CCCcceEEEEEE-
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRR--------SLDLEQLRERLSVICRSH---------HSSLIKLLGACV-  157 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~--------~~~~~~~~~E~~il~~l~---------h~nIv~l~~~~~-  157 (381)
                      ..+.||+|+||.||+|++.++.||||++....        ....+.+.+|+.+|++|+         |||||++++++. 
T Consensus        24 ~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~  103 (336)
T 2vuw_A           24 RCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV  103 (336)
T ss_dssp             TCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred             heeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence            46789999999999999999999999986543        223578999999999986         777777777643 


Q ss_pred             -----------------------------eCCeeeEEEeccCCCCHHHHhcCCCCCCccchHH-----------------
Q 016850          158 -----------------------------SGNCGYLVYEHVSGANLADCLRNPRNPSFTVLST-----------------  191 (381)
Q Consensus       158 -----------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~-----------------  191 (381)
                                                   +.+.+|||||||++|+|.+.+.. ...++..+..                 
T Consensus       104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~~  182 (336)
T 2vuw_A          104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASLR  182 (336)
T ss_dssp             ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence                                         26789999999999987777755 3334332222                 


Q ss_pred             -HHHHhhhcceeecccCC----------------CccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCC
Q 016850          192 -WLSRMQSSSIIVSEENA----------------GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGV  254 (381)
Q Consensus       192 -~~~~l~~~Nill~~~~~----------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  254 (381)
                       +|+||||+|||++.++.                ....+||+|||+++....         ...+||+.|+|||++.+..
T Consensus       183 ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~---------~~~~gt~~y~aPE~~~g~~  253 (336)
T 2vuw_A          183 FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD---------GIVVFCDVSMDEDLFTGDG  253 (336)
T ss_dssp             CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---------TEEECCCCTTCSGGGCCCS
T ss_pred             EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---------CcEEEeecccChhhhcCCC
Confidence             23367799999988641                113799999999987532         1357999999999998665


Q ss_pred             CCcchhHHHHHHH-HHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHH
Q 016850          255 VTQKCDVYAFGVV-VLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG  333 (381)
Q Consensus       255 ~~~~sDIwSlGvi-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  333 (381)
                       +.++||||||++ .+++++|..||...           .........+....     ..........+..+++++.+||
T Consensus       254 -~~~~Diwsl~~~~~~~~~~g~~p~~~~-----------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~dli  316 (336)
T 2vuw_A          254 -DYQFDIYRLMKKENNNRWGEYHPYSNV-----------LWLHYLTDKMLKQM-----TFKTKCNTPAMKQIKRKIQEFH  316 (336)
T ss_dssp             -SHHHHHHHHHHHHHTTCTTSCCTHHHH-----------HHHHHHHHHHHHTC-----CCSSCCCSHHHHHHHHHHHHHH
T ss_pred             -ccceehhhhhCCCCcccccccCCCcch-----------hhhhHHHHhhhhhh-----ccCcccchhhhhhcCHHHHHHH
Confidence             899999998777 77889999998521           00000100000000     0001111112356889999999


Q ss_pred             HHhhccCCCCCCChHHHH
Q 016850          334 LQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       334 ~~cl~~dP~~RPs~~evl  351 (381)
                      .+||+.|     |+.|++
T Consensus       317 ~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          317 RTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHGGGSS-----SHHHHH
T ss_pred             HHHhccC-----CHHHHH
Confidence            9999987     888886

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=2.9e-31  Score=243.34  Aligned_cols=203  Identities=14%  Similarity=0.231  Sum_probs=147.7

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHH-hhcCCCCcceEEEEEEe----CCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVI-CRSHHSSLIKLLGACVS----GNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il-~~l~h~nIv~l~~~~~~----~~~~~lv~e~~~  170 (381)
                      +.||+|+||.||+|.+.  ++.||+|++..     ...+.+|+.++ +.++||||+++++++.+    .+.+++||||++
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~   98 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   98 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence            56899999999999984  78899998642     35678899988 55599999999999987    677999999999


Q ss_pred             CCCHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +|+|.+++....  ..+...+..++                 ++|+|+||+++..+ .+..+||+|||++....      
T Consensus        99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~-~~~~~kl~Dfg~a~~~~------  171 (299)
T 3m2w_A           99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETT------  171 (299)
T ss_dssp             SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS-TTCCEEECCCTTCEECT------
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCC-CCCcEEEeccccccccc------
Confidence            999999998754  34444333332                 24669999998732 12679999999986531      


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                                          +..++.++|||||||++|||++|+.||..........                   ....
T Consensus       172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-------------------~~~~  212 (299)
T 3m2w_A          172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-------------------GMKT  212 (299)
T ss_dssp             --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-------------------CSCC
T ss_pred             --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-------------------HHHH
Confidence                                2456889999999999999999999996432211000                   0000


Q ss_pred             hhcccccCCCC----HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYP----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .+... ....+    ..+++.+.+|+.+||+.||.+|||+.|+++
T Consensus       213 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          213 RIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             SSCTT-CCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHhhc-cccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            00000 01111    235678999999999999999999999975

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=1.6e-31  Score=255.99  Aligned_cols=215  Identities=11%  Similarity=0.074  Sum_probs=149.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCC-CCcce-------------------
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHH-SSLIK-------------------  151 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h-~nIv~-------------------  151 (381)
                      .+.||+|+||.||+|++.  ++.||||+.......   ..+.+.+|+.+++.++| +|+..                   
T Consensus        83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (413)
T 3dzo_A           83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK  162 (413)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred             ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence            457899999999999986  899999987643332   35789999999999977 22111                   


Q ss_pred             --EEEEEEe-----CCeeeEEEeccCCCCHHHHhcC-----C-C-CCCc-------cchHHH----------HHHhhhcc
Q 016850          152 --LLGACVS-----GNCGYLVYEHVSGANLADCLRN-----P-R-NPSF-------TVLSTW----------LSRMQSSS  200 (381)
Q Consensus       152 --l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~-----~-~-~~~~-------~~~~~~----------~~~l~~~N  200 (381)
                        ++.++..     ...++++|+++ +|+|.+++..     . . ...+       .++...          |+||||+|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~N  241 (413)
T 3dzo_A          163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD  241 (413)
T ss_dssp             --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccce
Confidence              1111111     23467888887 6999999851     1 1 1111       122222          23677999


Q ss_pred             eeecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhh----------cCCCCCcchhHHHHHHHHHH
Q 016850          201 IIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQ----------ASGVVTQKCDVYAFGVVVLE  270 (381)
Q Consensus       201 ill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDIwSlGvil~e  270 (381)
                      ||++.+    +.+||+|||+++....       .....+| +.|+|||++          .+..++.++|||||||++||
T Consensus       242 ILl~~~----~~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e  309 (413)
T 3dzo_A          242 IVLDQR----GGVFLTGFEHLVRDGA-------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW  309 (413)
T ss_dssp             EEECTT----CCEEECCGGGCEETTE-------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred             EEEecC----CeEEEEeccceeecCC-------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence            999887    4599999999986432       1445678 999999998          55568899999999999999


Q ss_pred             HHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHH
Q 016850          271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV  350 (381)
Q Consensus       271 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev  350 (381)
                      |++|+.||........                      ....+...  .    .+++.+.+||.+||+.||++||++.++
T Consensus       310 lltg~~Pf~~~~~~~~----------------------~~~~~~~~--~----~~~~~~~~li~~~l~~dP~~Rpt~~~~  361 (413)
T 3dzo_A          310 IWCADLPNTDDAALGG----------------------SEWIFRSC--K----NIPQPVRALLEGFLRYPKEDRLLPLQA  361 (413)
T ss_dssp             HHHSSCCCCTTGGGSC----------------------SGGGGSSC--C----CCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             HHHCCCCCCCcchhhh----------------------HHHHHhhc--c----cCCHHHHHHHHHHccCChhhCcCHHHH
Confidence            9999999964322110                      00111100  1    234679999999999999999999888


Q ss_pred             HH
Q 016850          351 TG  352 (381)
Q Consensus       351 l~  352 (381)
                      ++
T Consensus       362 l~  363 (413)
T 3dzo_A          362 ME  363 (413)
T ss_dssp             TT
T ss_pred             Hh
Confidence            54

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=2.6e-27  Score=234.89  Aligned_cols=171  Identities=13%  Similarity=0.089  Sum_probs=113.4

Q ss_pred             ccccCCCceEEEEEE--CCceEEEEEeccccc----------ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEE
Q 016850           99 KFTSSSASASWRGTI--RGKDVIIFQRKLRRS----------LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~----------~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.|++|.+..++.  -|+.+++|.+.....          ...+++.+|+++|+++ .|+||+++++++++++.+|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            456677776665544  388999998765321          1356799999999999 799999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccch----H----------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVL----S----------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~----~----------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ||||+||+|.++|..........+    +          .+|+||||+|||++++    +.+||+|||+|+.+..    .
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~d----g~vKL~DFGlAr~~~~----~  392 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDAR----QHARLIDFGSIVTTPQ----D  392 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTT----SCEEECCCTTEESCC------
T ss_pred             EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCC----CCEEEeecccCeeCCC----C
Confidence            999999999999998776654322    1          1235788999999887    5699999999987532    2


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccc
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVL  278 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf  278 (381)
                      .....+.+||+.|||||++.+ .+..++|+||+|++++++.++..++
T Consensus       393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~  438 (569)
T 4azs_A          393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW  438 (569)
T ss_dssp             -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred             CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence            223456789999999999874 5678899999999999888776655

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.87  E-value=2.1e-23  Score=205.78  Aligned_cols=175  Identities=10%  Similarity=0.016  Sum_probs=126.4

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccc--------cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSL--------DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|...++.+++|+...+...        ..+++.+|+++|++++|||||++..++.+.+..||||||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~  420 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY  420 (540)
T ss_dssp             -------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred             CCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence            457999999999999888999999986443221        135589999999999999999666666677788999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHHHH----------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc---ccc
Q 016850          169 VSGANLADCLRNPRNPSFTVLSTWL----------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES---GKV  235 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~~~----------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~---~~~  235 (381)
                      |++|+|.+++.. ...-..++...+          +||||+|||+++      .+||+|||+++..........   ...
T Consensus       421 ~~ggsL~~~l~~-~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~------~~kL~DFGla~~~~~~~~~~~~~~~~~  493 (540)
T 3en9_A          421 INGKLAKDVIED-NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK------DLYIIDFGLGKISNLDEDKAVDLIVFK  493 (540)
T ss_dssp             CCSEEHHHHSTT-CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS------SEEECCCTTCEECCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHH-HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC------eEEEEECccCEECCCccccccchhhhh
Confidence            999999999987 222223333333          356677777776      399999999987532110000   012


Q ss_pred             cccCCCccccchhhhcC--CCCCcchhHHHHHHHHHHHHhCCccc
Q 016850          236 NKIEGTRGYMAPEFQAS--GVVTQKCDVYAFGVVVLELLSGEEVL  278 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~--~~~~~~sDIwSlGvil~elltg~~pf  278 (381)
                      ....||+.|||||++..  ..|+..+|+|+..+-..+-+.++.+|
T Consensus       494 ~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          494 KAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            46789999999999986  56888899999999999988877665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.69  E-value=1.6e-17  Score=150.36  Aligned_cols=128  Identities=12%  Similarity=0.094  Sum_probs=91.8

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEeccccc------------------ccHHHHHHHHHHHhhcCCCCcceEEEEEE
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRS------------------LDLEQLRERLSVICRSHHSSLIKLLGACV  157 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~------------------~~~~~~~~E~~il~~l~h~nIv~l~~~~~  157 (381)
                      .+.||+|+||.||+|.+. ++.||+|.......                  .....+.+|+++|++++  | +++++++.
T Consensus        95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~  171 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA  171 (282)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred             cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence            478999999999999995 78999998754321                  12456899999999999  5 66666554


Q ss_pred             eCCeeeEEEeccCCCCHHHHhcCCCCC-CccchHH----------HHHHhhhcceeecccCCCccceEEccccccccccc
Q 016850          158 SGNCGYLVYEHVSGANLADCLRNPRNP-SFTVLST----------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       158 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~----------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      . +..|+|||||++|+|.+ +...... -..++..          +|+||+|+|||++ +    +.+||+|||+++.   
T Consensus       172 ~-~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~----~~vkl~DFG~a~~---  241 (282)
T 1zar_A          172 W-EGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-E----EGIWIIDFPQSVE---  241 (282)
T ss_dssp             E-ETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-T----TEEEECCCTTCEE---
T ss_pred             c-cceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-C----CcEEEEECCCCeE---
Confidence            4 55699999999999999 5332110 0111222          2336779999998 4    5699999999864   


Q ss_pred             CCCCccccccccCCCccccchhhhc
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQA  251 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~  251 (381)
                                    +..|+|||++.
T Consensus       242 --------------~~~~~a~e~l~  252 (282)
T 1zar_A          242 --------------VGEEGWREILE  252 (282)
T ss_dssp             --------------TTSTTHHHHHH
T ss_pred             --------------CCCCCHHHHHH
Confidence                          34578999875

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.34  E-value=1.1e-12  Score=116.89  Aligned_cols=118  Identities=10%  Similarity=0.083  Sum_probs=78.1

Q ss_pred             ccccccCCCceEEEEEE--CCce--EEEEEecccccc------------------------cHHHHHHHHHHHhhcCCCC
Q 016850           97 AKKFTSSSASASWRGTI--RGKD--VIIFQRKLRRSL------------------------DLEQLRERLSVICRSHHSS  148 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~--v~vk~~~~~~~~------------------------~~~~~~~E~~il~~l~h~n  148 (381)
                      ...||+|+||.||+|.+  .|+.  ||||+.+.....                        ....+.+|+.+|.+|.|++
T Consensus        52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~  131 (258)
T 1zth_A           52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG  131 (258)
T ss_dssp             EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence            46799999999999998  6888  999986432111                        1236789999999998875


Q ss_pred             c--ceEEEEEEeCCeeeEEEeccCC-C----CHHHHhcCCCCC----CccchHHH-----------HHHhhhcceeeccc
Q 016850          149 L--IKLLGACVSGNCGYLVYEHVSG-A----NLADCLRNPRNP----SFTVLSTW-----------LSRMQSSSIIVSEE  206 (381)
Q Consensus       149 I--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~----~~~~~~~~-----------~~~l~~~Nill~~~  206 (381)
                      |  ..++++    +..+|||||+.+ |    +|.+++......    -..++...           |+||+|.|||+++ 
T Consensus       132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~-  206 (258)
T 1zth_A          132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID-  206 (258)
T ss_dssp             CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS-
T ss_pred             CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC-
Confidence            4  444543    356899999942 4    777765431100    11122222           2355677777765 


Q ss_pred             CCCccceEEccccccccc
Q 016850          207 NAGSLCAKICHFGTAELC  224 (381)
Q Consensus       207 ~~~~~~~kl~DFG~a~~~  224 (381)
                           .++|+|||+|...
T Consensus       207 -----~~~liDFG~a~~~  219 (258)
T 1zth_A          207 -----KVYFIDMGQAVTL  219 (258)
T ss_dssp             -----SEEECCCTTCEET
T ss_pred             -----cEEEEECcccccC
Confidence                 2899999999753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.02  E-value=1.2e-11  Score=115.33  Aligned_cols=126  Identities=13%  Similarity=0.081  Sum_probs=76.1

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEeccccc--------------ccHHH--------HHHHHHHHhhcCCCCcceE
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRS--------------LDLEQ--------LRERLSVICRSHHSSLIKL  152 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~--------------~~~~~--------~~~E~~il~~l~h~nIv~l  152 (381)
                      ....||.|++|.||+|... |+.||||+.+....              .....        ..+|...|.+|.+.++...
T Consensus        99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp  178 (397)
T 4gyi_A           99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP  178 (397)
T ss_dssp             EEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred             ecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4568999999999999985 88999998653211              01111        2356677777754443222


Q ss_pred             EEEEEeCCeeeEEEeccCCCCHHHHhcCCCCC-CccchHH----------HHHHhhhcceeecccCCC------ccceEE
Q 016850          153 LGACVSGNCGYLVYEHVSGANLADCLRNPRNP-SFTVLST----------WLSRMQSSSIIVSEENAG------SLCAKI  215 (381)
Q Consensus       153 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~----------~~~~l~~~Nill~~~~~~------~~~~kl  215 (381)
                      .-+...  ..+|||||++|++|.++....... -..++..          +|+||+|.|||+++++..      ...+.|
T Consensus       179 ~p~~~~--~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~i  256 (397)
T 4gyi_A          179 EPIAQS--RHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPII  256 (397)
T ss_dssp             CEEEEE--TTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEE
T ss_pred             eeeecc--CceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEE
Confidence            212122  237999999998887765432110 0112222          234677999999876420      124889


Q ss_pred             cccccccc
Q 016850          216 CHFGTAEL  223 (381)
Q Consensus       216 ~DFG~a~~  223 (381)
                      +||+-+..
T Consensus       257 ID~~Q~V~  264 (397)
T 4gyi_A          257 IXFPQMVS  264 (397)
T ss_dssp             CCCTTCEE
T ss_pred             EEeCCccc
Confidence            99996643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.75  E-value=1.2e-08  Score=90.74  Aligned_cols=85  Identities=8%  Similarity=0.044  Sum_probs=68.1

Q ss_pred             cCC-cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccC
Q 016850           93 NNF-LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+ ....++.|+++.||++...++.+++|............+.+|+++|+.|. +..+.++++++.+.+..|+||||++
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~   93 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD   93 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred             ccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence            344 34556788889999999888999999865432223456899999999994 6788899999999999999999999


Q ss_pred             CCCHHHH
Q 016850          171 GANLADC  177 (381)
Q Consensus       171 ~gsL~~~  177 (381)
                      |.+|.+.
T Consensus        94 G~~l~~~  100 (263)
T 3tm0_A           94 GVLCSEE  100 (263)
T ss_dssp             SEEHHHH
T ss_pred             Ceehhhc
Confidence            9998775

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.48  E-value=7.2e-08  Score=85.23  Aligned_cols=76  Identities=14%  Similarity=0.181  Sum_probs=57.7

Q ss_pred             ccccc-cCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCC--cceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFT-SSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSS--LIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg-~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ...++ .|..+.||++... |+.+++|.....   ....+.+|+.+++.+.+.+  +.+++++..+++..++||||++|.
T Consensus        24 ~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~  100 (264)
T 1nd4_A           24 WAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ  100 (264)
T ss_dssp             EEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred             eEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCc
Confidence            34565 5566999999875 567888885432   2356889999999995444  566999888888899999999988


Q ss_pred             CHH
Q 016850          173 NLA  175 (381)
Q Consensus       173 sL~  175 (381)
                      +|.
T Consensus       101 ~l~  103 (264)
T 1nd4_A          101 DLL  103 (264)
T ss_dssp             ETT
T ss_pred             ccC
Confidence            874

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.36  E-value=4.9e-07  Score=84.15  Aligned_cols=79  Identities=13%  Similarity=0.256  Sum_probs=58.7

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEec--cccc-ccHHHHHHHHHHHhhcC--CCCcceEEEEEEeC---CeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRK--LRRS-LDLEQLRERLSVICRSH--HSSLIKLLGACVSG---NCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~--~~~~-~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~---~~~~lv~e~  168 (381)
                      .+.|+.|.++.||+....++.+++|+..  .... .....+.+|+.+|+.|.  +..+.++++++.+.   +..++||||
T Consensus        43 ~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~  122 (359)
T 3dxp_A           43 VEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF  122 (359)
T ss_dssp             EEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred             EEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence            4578999999999999988888888754  2211 13457889999999996  45689999998876   458999999


Q ss_pred             cCCCCHH
Q 016850          169 VSGANLA  175 (381)
Q Consensus       169 ~~~gsL~  175 (381)
                      ++|..|.
T Consensus       123 v~G~~l~  129 (359)
T 3dxp_A          123 VSGRVLW  129 (359)
T ss_dssp             CCCBCCC
T ss_pred             cCCeecC
Confidence            9987773

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.82  E-value=9.2e-06  Score=73.58  Aligned_cols=74  Identities=11%  Similarity=0.156  Sum_probs=51.4

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhc-CCCC--cceEEEEEEeCC---eeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSS--LIKLLGACVSGN---CGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~n--Iv~l~~~~~~~~---~~~lv~e~~~~  171 (381)
                      +.++.|....||+..   +.+++|+...  ......+.+|+++|+.| .+..  +.+++......+   ..|+|||+++|
T Consensus        26 ~~~~~G~~n~v~~v~---~~~vlR~~~~--~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G  100 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN---RDFIFKFPKH--SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG  100 (304)
T ss_dssp             CEEEECSSEEEEEST---TSEEEEEESS--HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred             EecCCCCcceEEEEC---CEEEEEecCC--cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence            457889999999874   6788887432  23457799999999988 3332  445555543333   35899999998


Q ss_pred             CCHHH
Q 016850          172 ANLAD  176 (381)
Q Consensus       172 gsL~~  176 (381)
                      .+|.+
T Consensus       101 ~~l~~  105 (304)
T 3sg8_A          101 VPLTP  105 (304)
T ss_dssp             EECCH
T ss_pred             eECCc
Confidence            87764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.40  E-value=0.0008  Score=59.38  Aligned_cols=77  Identities=6%  Similarity=0.038  Sum_probs=56.1

Q ss_pred             cccccCCCc-eEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           98 KKFTSSSAS-ASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        98 ~~lg~G~~g-~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      +.+..|..| .||+....  +..+++|+...   .....+.+|..+|+.|. +--+.++++++.+.+..++|||+++|.+
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            445445444 68987764  55788876432   23467889999999884 3347788999999999999999999877


Q ss_pred             HHHH
Q 016850          174 LADC  177 (381)
Q Consensus       174 L~~~  177 (381)
                      +.+.
T Consensus       107 ~~~~  110 (272)
T 4gkh_A          107 AFQV  110 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6554

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.66  E-value=0.0077  Score=54.46  Aligned_cols=91  Identities=13%  Similarity=0.165  Sum_probs=68.8

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcC---CCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSH---HSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      +.|+.|....+|+....++.+++|....   .....+.+|+..|+.|.   ...+.+++++....+..++||||+++..+
T Consensus        42 ~~l~gG~~n~~y~v~~~~~~~vlK~~~~---~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           42 EKLYSGEMNEIWLINDEVQTVFVKINER---SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEECCSSSSEEEEEESSSCEEEEEEEEG---GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             EEeCCccceeeeEEEECCCeEEEEeCCc---ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            4688999999999998888999887542   23577899999999883   36788999998888889999999998765


Q ss_pred             HHHhcCCCCCCccchHHHHHHhhh
Q 016850          175 ADCLRNPRNPSFTVLSTWLSRMQS  198 (381)
Q Consensus       175 ~~~l~~~~~~~~~~~~~~~~~l~~  198 (381)
                      ..       .....+...+..||.
T Consensus       119 ~~-------~~~~~lG~~LA~LH~  135 (312)
T 3jr1_A          119 KQ-------SSFTIFAEKIAQLHQ  135 (312)
T ss_dssp             CT-------THHHHHHHHHHHHHH
T ss_pred             Cc-------hhHHHHHHHHHHHHc
Confidence            21       112344555666663

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.97  E-value=0.015  Score=54.38  Aligned_cols=80  Identities=14%  Similarity=0.117  Sum_probs=52.6

Q ss_pred             ccccccCCCceEEEEEE--CCceEEEEEeccccc-------ccHHHHHHHHHHHhhcCC--C-CcceEEEEEEeCCeeeE
Q 016850           97 AKKFTSSSASASWRGTI--RGKDVIIFQRKLRRS-------LDLEQLRERLSVICRSHH--S-SLIKLLGACVSGNCGYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~--~~~~v~vk~~~~~~~-------~~~~~~~~E~~il~~l~h--~-nIv~l~~~~~~~~~~~l  164 (381)
                      .+.||.|..+.||++..  .++.+++|.......       ...+++.+|.++|+.+..  + .+.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            45789999999999965  467888987532211       134567889999988842  3 34466654  4455689


Q ss_pred             EEeccCCCC-HHHHh
Q 016850          165 VYEHVSGAN-LADCL  178 (381)
Q Consensus       165 v~e~~~~gs-L~~~l  178 (381)
                      ||||+++.. +.+.+
T Consensus       113 vmE~l~g~~~~~~~l  127 (397)
T 2olc_A          113 VMEDLSHLKIARKGL  127 (397)
T ss_dssp             EECCCTTSEEHHHHH
T ss_pred             EEEeCCCcchHHHHH
Confidence            999997643 33444

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=94.76  E-value=0.04  Score=48.85  Aligned_cols=74  Identities=12%  Similarity=-0.020  Sum_probs=53.0

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCC---CCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHH---SSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h---~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.+|.|..+.||+.+.. |+.+++|+...........+..|+..|+.|.-   --+.+++++  +.  -++||||++++
T Consensus        20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e~l~~~   95 (288)
T 3f7w_A           20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAMEWVDER   95 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEECCCCC
T ss_pred             EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEEeeccc
Confidence            456899999999999985 67888887543333334568899999998842   235566654  22  37899999876


Q ss_pred             CH
Q 016850          173 NL  174 (381)
Q Consensus       173 sL  174 (381)
                      ..
T Consensus        96 ~~   97 (288)
T 3f7w_A           96 PP   97 (288)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.29  E-value=0.072  Score=47.77  Aligned_cols=74  Identities=9%  Similarity=0.092  Sum_probs=54.9

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCC---CcceEEEEEE-eCCeeeEEEeccCCCC
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHS---SLIKLLGACV-SGNCGYLVYEHVSGAN  173 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~---nIv~l~~~~~-~~~~~~lv~e~~~~gs  173 (381)
                      ..++.|....||+.   ++.+++|+-  ........+.+|+++|+.|.+.   .+.+++.+.. ..+..++||||++|.+
T Consensus        25 ~~l~~G~~n~v~~v---g~~~VlR~~--~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~   99 (306)
T 3tdw_A           25 ESLGEGFRNYAILV---NGDWVFRFP--KSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI   99 (306)
T ss_dssp             EEEEECSSEEEEEE---TTTEEEEEE--SSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred             eecCCCcceeEEEE---CCEEEEEec--CCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence            45677888899988   788888873  2223456799999999999642   3667777764 4556789999999887


Q ss_pred             HHH
Q 016850          174 LAD  176 (381)
Q Consensus       174 L~~  176 (381)
                      |.+
T Consensus       100 l~~  102 (306)
T 3tdw_A          100 LGE  102 (306)
T ss_dssp             CHH
T ss_pred             Cch
Confidence            765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=94.04  E-value=0.044  Score=50.15  Aligned_cols=79  Identities=13%  Similarity=0.109  Sum_probs=56.0

Q ss_pred             ccc-ccCCCceEEEEEEC--------CceEEEEEecccc---cccHHHHHHHHHHHhhcC-C--CCcceEEEEEEeC---
Q 016850           98 KKF-TSSSASASWRGTIR--------GKDVIIFQRKLRR---SLDLEQLRERLSVICRSH-H--SSLIKLLGACVSG---  159 (381)
Q Consensus        98 ~~l-g~G~~g~V~~~~~~--------~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~-h--~nIv~l~~~~~~~---  159 (381)
                      +.| +.|....+|+....        ++.+++|+.....   ......+.+|+.+|+.|. +  -.+.++++++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            456 78888999998775        6678887643322   112256888999999884 3  3578888887665   


Q ss_pred             CeeeEEEeccCCCCHHH
Q 016850          160 NCGYLVYEHVSGANLAD  176 (381)
Q Consensus       160 ~~~~lv~e~~~~gsL~~  176 (381)
                      +..++||||++|..|.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence            35689999998877654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.53  E-value=0.16  Score=45.89  Aligned_cols=73  Identities=10%  Similarity=0.104  Sum_probs=45.4

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcC--CCCcceEEE------EEEeCCeeeEEEecc
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSH--HSSLIKLLG------ACVSGNCGYLVYEHV  169 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~l~~------~~~~~~~~~lv~e~~  169 (381)
                      ..|+.|..+.||+....++.+++|+...    ...++..|+.++..|.  .-.+.+++.      +....+..++||||+
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~~vlk~~~~----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGAVCLKRIHR----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             EECC----CEEEEEEETTEEEEEEEECS----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred             eeccccccCcEEEEEeCCCCEEEEecCC----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence            3456677899999998888888888653    2345566777776663  112334433      123467789999999


Q ss_pred             CCCCH
Q 016850          170 SGANL  174 (381)
Q Consensus       170 ~~gsL  174 (381)
                      +|..+
T Consensus       114 ~G~~~  118 (346)
T 2q83_A          114 EGRPF  118 (346)
T ss_dssp             CCBCC
T ss_pred             cCccC
Confidence            97654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=91.21  E-value=0.2  Score=44.60  Aligned_cols=70  Identities=7%  Similarity=0.040  Sum_probs=43.6

Q ss_pred             cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCc-ceEEEEEEeCCeeeEEEecc-CCCCH
Q 016850           98 KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSL-IKLLGACVSGNCGYLVYEHV-SGANL  174 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~-~~gsL  174 (381)
                      +.|+.|....+|+.    +.+++|+....... .....+|+.+++.+..-.+ .+++++  +.+.-++|+||+ ++.+|
T Consensus        24 ~~l~gG~tN~~~~~----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           24 LERLGGLTNLVFRA----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             EEEESCSSEEEEEE----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred             eEcCCcccccccee----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence            56778888999999    67888775432111 1223568888887742222 466654  333457899999 65444

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=90.82  E-value=0.029  Score=53.67  Aligned_cols=58  Identities=12%  Similarity=-0.028  Sum_probs=16.7

Q ss_pred             cccccCCCceEEEEEECC--ceEEE------EEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEe
Q 016850           98 KKFTSSSASASWRGTIRG--KDVII------FQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVS  158 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~--~~v~v------k~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~  158 (381)
                      +.||   ||.||+|.+.+  .+||+      |..+...  ......+.+|..+++.++|||+++.+++...
T Consensus       148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            4555   99999999975  46777      5432211  1123467889999999999999999998654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=90.02  E-value=0.65  Score=43.43  Aligned_cols=74  Identities=4%  Similarity=-0.076  Sum_probs=47.2

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEeccc-----c--cc--cHHHHHHHHHHHh-hcCCCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLR-----R--SL--DLEQLRERLSVIC-RSHHSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~-----~--~~--~~~~~~~E~~il~-~l~h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||.|..+.||++...++.++||.....     .  ..  ....+..|+..+. ......+.+++.+.  .+..++|
T Consensus        38 ~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv  115 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG  115 (420)
T ss_dssp             EEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred             EEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence            3457899999999999877788999843211     1  11  2333444433222 22335677888765  5667899


Q ss_pred             Eecc-CC
Q 016850          166 YEHV-SG  171 (381)
Q Consensus       166 ~e~~-~~  171 (381)
                      |||+ ++
T Consensus       116 ~e~l~~g  122 (420)
T 2pyw_A          116 MRYLEPP  122 (420)
T ss_dssp             ECCCCTT
T ss_pred             EeecCCc
Confidence            9999 76

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=89.45  E-value=0.25  Score=41.69  Aligned_cols=33  Identities=9%  Similarity=0.111  Sum_probs=20.2

Q ss_pred             CccccchhhhcCCCCCcchhHHHHHHHHHHHHhC
Q 016850          241 TRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG  274 (381)
Q Consensus       241 t~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg  274 (381)
                      ...+.|||... ...+.+.=|||||+++|.-+--
T Consensus       100 ~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy  132 (229)
T 2yle_A          100 EPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY  132 (229)
T ss_dssp             -------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence            34566888653 3446788999999999998863

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=85.24  E-value=0.81  Score=41.15  Aligned_cols=78  Identities=9%  Similarity=0.066  Sum_probs=44.4

Q ss_pred             ccccccCCCc-eEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcC-C-CCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           97 AKKFTSSSAS-ASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-H-SSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        97 ~~~lg~G~~g-~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h-~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      .+.|..|+.. .+|+.... ++.+++|......   .+.+..|+.+++.|. + -.+.+++.+..+.+  ++|||++.+.
T Consensus        23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~   97 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA   97 (333)
T ss_dssp             ECC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred             eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence            3456555444 47788774 7777776533221   134566788887773 2 34667777643333  6899999777


Q ss_pred             CHHHHhc
Q 016850          173 NLADCLR  179 (381)
Q Consensus       173 sL~~~l~  179 (381)
                      .+.+++.
T Consensus        98 ~l~~~l~  104 (333)
T 3csv_A           98 LFTEVIN  104 (333)
T ss_dssp             BHHHHHH
T ss_pred             chHHHhc
Confidence            7776654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=83.13  E-value=1.6  Score=38.76  Aligned_cols=90  Identities=10%  Similarity=0.007  Sum_probs=52.4

Q ss_pred             eeHHHHHHHhcCCcc------cccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCC--cceEEE
Q 016850           83 YHLSEICAATNNFLA------KKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSS--LIKLLG  154 (381)
Q Consensus        83 ~~~~~~~~~~~~f~~------~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~  154 (381)
                      ++.+++......|..      +.|+.|....+|+....++.+++|.....  ...+.+..|+.++..|....  +.+++.
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~   84 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLP   84 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence            445555555544422      34566777899999988778888876542  12345677888888773211  233332


Q ss_pred             E------EEeCCeeeEEEeccCCCCH
Q 016850          155 A------CVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus       155 ~------~~~~~~~~lv~e~~~~gsL  174 (381)
                      .      ....+..++||+|++|..+
T Consensus        85 ~~~g~~~~~~~g~~~~l~~~l~G~~~  110 (322)
T 2ppq_A           85 RKDGELLGELSGRPAALISFLEGMWL  110 (322)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCC
T ss_pred             CCCCCEEEEECCEEEEEEEeCCCcCC
Confidence            1      1234667899999987653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=82.46  E-value=1.4  Score=40.73  Aligned_cols=74  Identities=9%  Similarity=0.012  Sum_probs=46.0

Q ss_pred             ccccccCCCceEEEEEEC---------CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      .+.|..|-...+|++...         ++.+++++. .........+.+|..+++.|. +.-..++++++.+    .+||
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence            456777888999999874         367777763 222224567789999999883 3334677776554    2999


Q ss_pred             eccCCCCHH
Q 016850          167 EHVSGANLA  175 (381)
Q Consensus       167 e~~~~gsL~  175 (381)
                      ||++|.+|.
T Consensus       130 e~i~G~~l~  138 (379)
T 3feg_A          130 QYIPSRPLK  138 (379)
T ss_dssp             ECCSEEECC
T ss_pred             EEecCccCC
Confidence            999876553

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=81.69  E-value=2  Score=40.32  Aligned_cols=72  Identities=10%  Similarity=-0.015  Sum_probs=49.1

Q ss_pred             ccccccCCCceEEEEEEC---------CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR---------GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---------~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      .+.|+.|-...||++...         ++.+++++....  ...+.+.+|..+++.|. +.-..++++.+.+    .+||
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            456778888999999875         367777775221  12256778999999884 3334677776543    2899


Q ss_pred             eccCCCCH
Q 016850          167 EHVSGANL  174 (381)
Q Consensus       167 e~~~~gsL  174 (381)
                      ||++|.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	381
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-27
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-27
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-26
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-25
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-25
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-24
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-24
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-24
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-23
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-23
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-23
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	7e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-23
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-21
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-21
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-21
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-20
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-19
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-19
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-19
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-18
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-17
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-17
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-17
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-16
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-16
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-15
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-15
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-14
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	6e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-11
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	9e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-04

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 1e-27
 Identities = 47/285 (16%), Positives = 96/285 (33%), Gaps = 45/285 (15%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRER-LSVICRSHHSSLIKLLGACVSGNCG----Y 163
           WRG  RG++V +  +      +    RE  +       H +++  + A    N      +
Sbjct: 20  WRGKWRGEEVAV--KIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLSR------------------------MQSS 199
           LV ++    +L D L         ++   LS                         ++S 
Sbjct: 78  LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137

Query: 200 SIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGV----- 254
           +I+V +         I   G A      +       N   GT+ YMAPE     +     
Sbjct: 138 NILVKKNG----TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 193

Query: 255 -VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV 313
              ++ D+YA G+V  E+      +  + ++    Y  +   D + E +   V    + +
Sbjct: 194 ESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPSVEEMRKVV--CEQKL 250

Query: 314 DRRLKDSY-PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
              + + +   E    M  +  +C   +   R    ++   +S++
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 1e-27
 Identities = 49/260 (18%), Positives = 98/260 (37%), Gaps = 39/260 (15%)

Query: 109 WRGTIRGKDVI-IFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE 167
           ++G   G   + +          L+  +  + V+ ++ H +++  +G   +     +V +
Sbjct: 25  YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 83

Query: 168 HVSGANLADCLRNPRNPS--------FTVLSTWLSRMQSSSII---VSEEN---AGSLCA 213
              G++L   L                   +  +  + + SII   +   N      L  
Sbjct: 84  WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV 143

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEF---QASGVVTQKCDVYAFGVVVLE 270
           KI  FG A +    SG+   +  ++ G+  +MAPE    Q     + + DVYAFG+V+ E
Sbjct: 144 KIGDFGLATVKSRWSGSH--QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYE 201

Query: 271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMV 330
           L++G+             Y  ++  D+    V       R ++   L         + M 
Sbjct: 202 LMTGQLP-----------YSNINNRDQIIFMVG------RGYLSPDL-SKVRSNCPKAMK 243

Query: 331 LLGLQCVDEDPGKRPDMRQV 350
            L  +C+ +   +RP   Q+
Sbjct: 244 RLMAECLKKKRDERPLFPQI 263

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 9e-26
 Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 39/256 (15%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
             G  RG+  +  +     S+  ++  E   V+    H  L++L G C      +++ E+
Sbjct: 21  KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 80

Query: 169 VSGANLADCLRNPRNPS--------FTVLSTWLSRMQSSSIIVSEENA------GSLCAK 214
           ++   L + LR  R+             +   +  ++S   +  +  A           K
Sbjct: 81  MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVK 140

Query: 215 ICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
           +  FG   L   V  +E       +    +  PE       + K D++AFGV++ E+ S 
Sbjct: 141 VSDFG---LSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197

Query: 275 EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGL 334
                     G   Y R +  +              + + + L+   P   +EK+  +  
Sbjct: 198 ----------GKMPYERFTNSE------------TAEHIAQGLRLYRPHLASEKVYTIMY 235

Query: 335 QCVDEDPGKRPDMRQV 350
            C  E   +RP  + +
Sbjct: 236 SCWHEKADERPTFKIL 251

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 1e-25
 Identities = 50/258 (19%), Positives = 94/258 (36%), Gaps = 47/258 (18%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG-YLVYE 167
             G  RG  V +  + ++     +      SV+ +  HS+L++LLG  V    G Y+V E
Sbjct: 24  MLGDYRGNKVAV--KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 81

Query: 168 HVSGANLADCLRNPRNPSFTVLSTW---------LSRMQSSSII---VSEEN---AGSLC 212
           +++  +L D LR+                     +  ++ ++ +   ++  N   +    
Sbjct: 82  YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 141

Query: 213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
           AK+  FG  +         S   +  +    + APE       + K DV++FG+++ E+ 
Sbjct: 142 AKVSDFGLTKEA-------SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 194

Query: 273 SGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLL 332
           S   V           Y R+ + D            V   V++  K   P      +  +
Sbjct: 195 SFGRVP----------YPRIPLKD------------VVPRVEKGYKMDAPDGCPPAVYEV 232

Query: 333 GLQCVDEDPGKRPDMRQV 350
              C   D   RP   Q+
Sbjct: 233 MKNCWHLDAAMRPSFLQL 250

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 2e-25
 Identities = 47/269 (17%), Positives = 100/269 (37%), Gaps = 41/269 (15%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
           W G   G   +  +   + S+  +      +++ +  H  L++L          Y++ E+
Sbjct: 30  WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEY 88

Query: 169 VSGANLADCLRNPRNPSFTV---------LSTWLSRMQSSSII---VSEEN---AGSLCA 213
           +   +L D L+ P     T+         ++  ++ ++  + I   +   N   + +L  
Sbjct: 89  MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 148

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           KI  FG A L   +  NE       +    + APE    G  T K DV++FG+++ E+++
Sbjct: 149 KIADFGLARL---IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

Query: 274 GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG 333
                  +   G+                      V + ++R  +   P    E++  L 
Sbjct: 206 HGR----IPYPGMTNPE------------------VIQNLERGYRMVRPDNCPEELYQLM 243

Query: 334 LQCVDEDPGKRPDMRQVTGLVSKMYLESK 362
             C  E P  RP    +  ++   +  ++
Sbjct: 244 RLCWKERPEDRPTFDYLRSVLEDFFTATE 272

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 2e-24
 Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 43/245 (17%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           ++F+ +L ++    QLR  + +     H ++++L G        YL+ E+     +   L
Sbjct: 38  VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 97

Query: 179 RNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCG 225
           +          +T+       LS   S  +I   +  EN     +   KI  FG +    
Sbjct: 98  QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA- 156

Query: 226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG 285
                 S +   + GT  Y+ PE     +  +K D+++ GV+  E L G+    F  +  
Sbjct: 157 -----PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK--PPFEANTY 209

Query: 286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP 345
            + Y+R+S                      R++ ++P  V E    L  + +  +P +RP
Sbjct: 210 QETYKRIS----------------------RVEFTFPDFVTEGARDLISRLLKHNPSQRP 247

Query: 346 DMRQV 350
            +R+V
Sbjct: 248 MLREV 252

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.8 bits (243), Expect = 5e-24
 Identities = 41/269 (15%), Positives = 91/269 (33%), Gaps = 58/269 (21%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERL----SVICRSHHSSLIKLLGACVS----GN 160
           ++G      V +   +L+     +  R+R      ++    H ++++   +  S      
Sbjct: 26  YKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 85

Query: 161 CGYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRM-------------------QSSSI 201
           C  LV E ++   L   L+  +     VL +W  ++                   +  +I
Sbjct: 86  CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNI 145

Query: 202 IVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDV 261
            ++         KI   G A L        +     + GT  +MAPE        +  DV
Sbjct: 146 FITGPTG---SVKIGDLGLATL------KRASFAKAVIGTPEFMAPE-MYEEKYDESVDV 195

Query: 262 YAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSY 321
           YAFG+ +LE+ +     ++ + E  +  +                   R+        S+
Sbjct: 196 YAFGMCMLEMATS----EYPYSECQNAAQI-----------------YRRVTSGVKPASF 234

Query: 322 PVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
                 ++  +   C+ ++  +R  ++ +
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDL 263

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.9 bits (243), Expect = 6e-24
 Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 41/257 (15%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
           W GT  G   +  +     ++  E   +   V+ +  H  L++L          Y+V E+
Sbjct: 34  WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEY 92

Query: 169 VSGANLADCLRNPRNPSFTV---------LSTWLSRMQSSSII---VSEEN---AGSLCA 213
           +S  +L D L+        +         +++ ++ ++  + +   +   N     +L  
Sbjct: 93  MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC 152

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           K+  FG A L   +  NE       +    + APE    G  T K DV++FG+++ EL +
Sbjct: 153 KVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 209

Query: 274 GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG 333
                  V   G+                      V   V+R  +   P E  E +  L 
Sbjct: 210 KGR----VPYPGMVNRE------------------VLDQVERGYRMPCPPECPESLHDLM 247

Query: 334 LQCVDEDPGKRPDMRQV 350
            QC  ++P +RP    +
Sbjct: 248 CQCWRKEPEERPTFEYL 264

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.1 bits (241), Expect = 1e-23
 Identities = 44/279 (15%), Positives = 95/279 (34%), Gaps = 51/279 (18%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSLDLEQLRERL----SVICRSHHSSLIKLLGACVSGNCG 162
             ++     K V +  + L+   +   L++ L    +V+ +  +  +++++G C + +  
Sbjct: 26  GYYQMKKVVKTVAV--KILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESW- 82

Query: 163 YLVYEHVSGANLADCLRNPRNPSFTVLSTWLSR-----------------MQSSSIIVSE 205
            LV E      L   L+  R+     +   + +                 + + ++++  
Sbjct: 83  MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT 142

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG 265
           ++     AKI  FG ++           +    +    + APE       + K DV++FG
Sbjct: 143 QH----YAKISDFGLSKALRADENYYKAQ-THGKWPVKWYAPECINYYKFSSKSDVWSFG 197

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEV 325
           V++ E  S           G   YR +   +            V   +++  +   P   
Sbjct: 198 VLMWEAFS----------YGQKPYRGMKGSE------------VTAMLEKGERMGCPAGC 235

Query: 326 AEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNW 364
             +M  L   C   D   RP    V   +   Y +  N 
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 274

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 96.7 bits (240), Expect = 2e-23
 Identities = 53/280 (18%), Positives = 109/280 (38%), Gaps = 50/280 (17%)

Query: 109 WRGTIRGKDVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE 167
           + G  +   + +  + L+  ++++E+  +  +V+    H +L++LLG C      Y++ E
Sbjct: 34  YEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 93

Query: 168 HVSGANLADCLRNPRNPSFTV------------LSTWLSRM-------QSSSIIVSEENA 208
            ++  NL D LR       +                +L +         + + +V E + 
Sbjct: 94  FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH- 152

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV 268
                K+  FG + L   ++G+        +    + APE  A    + K DV+AFGV++
Sbjct: 153 ---LVKVADFGLSRL---MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 206

Query: 269 LELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEK 328
            E+ +           GID  +                  V + +++  +   P    EK
Sbjct: 207 WEIATY----GMSPYPGIDLSQ------------------VYELLEKDYRMERPEGCPEK 244

Query: 329 MVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKI 368
           +  L   C   +P  RP   ++      M+ ES + +D++
Sbjct: 245 VYELMRACWQWNPSDRPSFAEIHQAFETMFQES-SISDEV 283

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.5 bits (237), Expect = 3e-23
 Identities = 46/251 (18%), Positives = 95/251 (37%), Gaps = 38/251 (15%)

Query: 115 GKDVIIFQRKLRRSLD-LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN 173
            + V +    ++R++D  E +++ + +    +H +++K  G    GN  YL  E+ SG  
Sbjct: 30  EEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89

Query: 174 LADCLRNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGT 220
           L D +             +       +  +    I    +  EN         KI  FG 
Sbjct: 90  LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGL 149

Query: 221 AELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGEEVLK 279
           A +      N    +NK+ GT  Y+APE  +      +  DV++ G+V+  +L+G    +
Sbjct: 150 ATVFR--YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG----E 203

Query: 280 FVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDE 339
             +D+  D  +                     W +++   +   ++    + L  + + E
Sbjct: 204 LPWDQPSDSCQE-----------------YSDWKEKKTYLNPWKKIDSAPLALLHKILVE 246

Query: 340 DPGKRPDMRQV 350
           +P  R  +  +
Sbjct: 247 NPSARITIPDI 257

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.4 bits (234), Expect = 7e-23
 Identities = 42/256 (16%), Positives = 88/256 (34%), Gaps = 39/256 (15%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH 168
             G    KD +  +     ++  E   E   V+ +  H  L++L G C+      LV+E 
Sbjct: 22  HLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 81

Query: 169 VSGANLADCLRNPRNPS--------FTVLSTWLSRMQSSSII---VSEEN---AGSLCAK 214
           +    L+D LR  R              +   ++ ++ + +I   ++  N     +   K
Sbjct: 82  MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIK 141

Query: 215 ICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
           +  FG   +   V  ++       +    + +PE  +    + K DV++FGV++ E+ S 
Sbjct: 142 VSDFG---MTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSE 198

Query: 275 EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGL 334
            ++                               V + +    +   P   +  +  +  
Sbjct: 199 GKIPYENRSN----------------------SEVVEDISTGFRLYKPRLASTHVYQIMN 236

Query: 335 QCVDEDPGKRPDMRQV 350
            C  E P  RP   ++
Sbjct: 237 HCWKERPEDRPAFSRL 252

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.5 bits (237), Expect = 8e-23
 Identities = 43/279 (15%), Positives = 98/279 (35%), Gaps = 43/279 (15%)

Query: 109 WRGTIRGKDVIIFQRKLRRSLD---LEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV 165
           ++ + +   +++ ++ +   +      Q+   L V+   +   ++   GA  S     + 
Sbjct: 23  FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 82

Query: 166 YEHVSGANLADCLRNPRNPSFTVLSTW-------LSRMQSSSIIV----SEEN---AGSL 211
            EH+ G +L   L+        +L          L+ ++    I+       N       
Sbjct: 83  MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142

Query: 212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLEL 271
             K+C FG +              N   GTR YM+PE       + + D+++ G+ ++E+
Sbjct: 143 EIKLCDFGVSGQL------IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196

Query: 272 LSGE--------EVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPV 323
             G         + L+ +F   ++G    +     +        G+       + +    
Sbjct: 197 AVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256

Query: 324 EVAEKMVLLG------------LQCVDEDPGKRPDMRQV 350
            V E    L              +C+ ++P +R D++Q+
Sbjct: 257 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.9 bits (230), Expect = 6e-22
 Identities = 63/295 (21%), Positives = 105/295 (35%), Gaps = 66/295 (22%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSLD-LEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYL 164
           A  +      D  I + K   S D        L V+C+  HH ++I LLGAC      YL
Sbjct: 29  ARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 88

Query: 165 VYEHVSGANLADCLR-------NPRNPSFTVLSTWLSRMQ-------------------- 197
             E+    NL D LR       +P        ++ LS  Q                    
Sbjct: 89  AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF 148

Query: 198 ------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQA 251
                 + +I+V E       AKI  FG +           G+         +MA E   
Sbjct: 149 IHRDLAARNILVGENY----VAKIADFGLSRGQEVYVKKTMGR-----LPVRWMAIESLN 199

Query: 252 SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK 311
             V T   DV+++GV++ E++S           G   Y  ++  +            + +
Sbjct: 200 YSVYTTNSDVWSYGVLLWEIVSL----------GGTPYCGMTCAE------------LYE 237

Query: 312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWAD 366
            + +  +   P+   +++  L  QC  E P +RP   Q+   +++M  E K + +
Sbjct: 238 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 292

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.1 bits (228), Expect = 9e-22
 Identities = 51/316 (16%), Positives = 100/316 (31%), Gaps = 62/316 (19%)

Query: 83  YHLSEICAATNNFLAKKFTSS----------SASASWRGTIR--GKDVIIFQRKLRRSLD 130
           +   +   A   F  +   S                  G ++  GK  I    K  +S  
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 131 LEQLRERL----SVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPSF 186
            E+ R       S++ +  H ++I L G         ++ E +   +L   LR       
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 187 TVLSTWLSR------------------MQSSSIIVSEENAGSLCAKICHFGTAELC-GEV 227
            +    + R                  + + +I+V+      L  K+  FG +     + 
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN----LVCKVSDFGLSRFLEDDT 182

Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID 287
           S          +    + APE       T   DV+++G+V+ E++S  E           
Sbjct: 183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP-------YW 235

Query: 288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
                 V++                +++  +   P++    +  L L C  +D   RP  
Sbjct: 236 DMTNQDVINA---------------IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 280

Query: 348 RQVTGLVSKMYLESKN 363
            Q+   + KM + + N
Sbjct: 281 GQIVNTLDKM-IRNPN 295

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 1e-21
 Identities = 36/251 (14%), Positives = 87/251 (34%), Gaps = 37/251 (14%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV-SGNCGYLVYEHVSGANLAD-CLRN 180
            ++    ++ Q      ++    H +++ LLG C+ S     +V  ++   +L +     
Sbjct: 64  NRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE 123

Query: 181 PRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCGEV 227
             NP+   L  +       +  + S   +   ++  N         K+  FG A    + 
Sbjct: 124 THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 183

Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID 287
             +        +    +MA E   +   T K DV++FGV++ EL++            ++
Sbjct: 184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR----GAPPYPDVN 239

Query: 288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
            +                   +  ++ +  +   P    + +  + L+C       RP  
Sbjct: 240 TFD------------------ITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSF 281

Query: 348 RQVTGLVSKMY 358
            ++   +S ++
Sbjct: 282 SELVSRISAIF 292

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (226), Expect = 2e-21
 Identities = 44/264 (16%), Positives = 89/264 (33%), Gaps = 42/264 (15%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           I+ +R + +   +  +     V+ R  H   +KL          Y    +     L   +
Sbjct: 40  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 99

Query: 179 RNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCG 225
           R   +   T    +       L  +    II   +  EN      +  +I  FGTA++  
Sbjct: 100 RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 159

Query: 226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG 285
               ++  + N   GT  Y++PE        +  D++A G ++ +L++G     F     
Sbjct: 160 P--ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL--PPFRAGNE 215

Query: 286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP 345
              ++++                       +L+  +P +   K   L  + +  D  KR 
Sbjct: 216 YLIFQKI----------------------IKLEYDFPEKFFPKARDLVEKLLVLDATKRL 253

Query: 346 DMRQVTGLVSKM---YLESKNWAD 366
              ++ G        + ES  W +
Sbjct: 254 GCEEMEGYGPLKAHPFFESVTWEN 277

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 4e-21
 Identities = 41/248 (16%), Positives = 97/248 (39%), Gaps = 37/248 (14%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G++V I Q  L++    E +   + V+  + + +++  L + + G+  ++V E+++G +L
Sbjct: 45  GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104

Query: 175 ADCLRNPRNPSFTVLSTW------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAE 222
            D +         + +        L  + S+ +I   +  +N         K+  FG   
Sbjct: 105 TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 164

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVF 282
                   E  K + + GT  +MAPE         K D+++ G++ +E++ GE    ++ 
Sbjct: 165 QIT----PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE--PPYLN 218

Query: 283 DEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPG 342
           +  +     +                     +   +   P +++        +C+D D  
Sbjct: 219 ENPLRALYLI-------------------ATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259

Query: 343 KRPDMRQV 350
           KR   +++
Sbjct: 260 KRGSAKEL 267

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.8 bits (222), Expect = 5e-21
 Identities = 45/260 (17%), Positives = 91/260 (35%), Gaps = 41/260 (15%)

Query: 107 ASWRGTIRGKDVIIFQ-RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLV 165
             +R   +  DV I   ++     D E++     ++ +  +  +++L+G C +     LV
Sbjct: 28  GVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLV 86

Query: 166 YEHVSGANLADCLRNPRNPSFTVLSTW---------LSRMQSSSII---VSEEN---AGS 210
            E   G  L   L   R     V +           +  ++  + +   ++  N      
Sbjct: 87  MEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR 145

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
             AKI  FG ++  G    +     +  +    + APE       + + DV+++GV + E
Sbjct: 146 HYAKISDFGLSKALGA-DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 204

Query: 271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMV 330
            LS           G   Y+++   +            V  ++++  +   P E   ++ 
Sbjct: 205 ALS----------YGQKPYKKMKGPE------------VMAFIEQGKRMECPPECPPELY 242

Query: 331 LLGLQCVDEDPGKRPDMRQV 350
            L   C       RPD   V
Sbjct: 243 ALMSDCWIYKWEDRPDFLTV 262

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.0 bits (220), Expect = 9e-21
 Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 42/242 (17%)

Query: 126 RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNPS 185
           RR +  E +   +S++    H ++I L     +     L+ E V+G  L D L    + +
Sbjct: 52  RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT 111

Query: 186 FTVLSTWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTAELCGEVS 228
               + +L ++                 +  +I++ + N      KI  FG A       
Sbjct: 112 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---- 167

Query: 229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG 288
            +   +   I GT  ++APE      +  + D+++ GV+   LLSG     F+ D   + 
Sbjct: 168 -DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS--PFLGDTKQET 224

Query: 289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR 348
              V                    V+   +D Y    +        + + +DP KR  ++
Sbjct: 225 LANV------------------SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQ 266

Query: 349 QV 350
             
Sbjct: 267 DS 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 2e-20
 Identities = 56/292 (19%), Positives = 99/292 (33%), Gaps = 57/292 (19%)

Query: 107 ASWRGTIRGKDVIIFQRK-LRRSLDLEQ----LRERLSVICRSHHSSLIKLLGACVSGNC 161
           A+  G I+    +    K L+ S  L +    + E   +    +H +++ LLGAC  G  
Sbjct: 42  ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101

Query: 162 GYLVYEHVSGANLADCLRNPRNPSFTVLSTWLSRMQSSSIIVSEENAGSLCAKIC----- 216
             ++ E+    +L + LR  R+ SF    T  + M+   + +  E+  S   ++      
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRD-SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160

Query: 217 -------------------HFGTAELCGEV------SGNESGKVNKIEGTRGYMAPEFQA 251
                              H    ++C         + +             +MAPE   
Sbjct: 161 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220

Query: 252 SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK 311
           + V T + DV+++G+ + EL S                                     K
Sbjct: 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---------------------FYK 259

Query: 312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKN 363
            +    +   P     +M  +   C D DP KRP  +Q+  L+ K   ES N
Sbjct: 260 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 2e-20
 Identities = 38/272 (13%), Positives = 92/272 (33%), Gaps = 48/272 (17%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGY 163
              + +   K+V +  + L+                ++ +  H ++I+L G         
Sbjct: 26  GMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 85

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLSR------------------MQSSSIIVSE 205
           ++ E++    L   LR        +    + R                  + + +I+V+ 
Sbjct: 86  IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS 145

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG 265
                L  K+  FG + +  +     +   +  +    + APE  +    T   DV++FG
Sbjct: 146 N----LVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFG 200

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEV 325
           +V+ E+++  E   +                            V K ++   +   P++ 
Sbjct: 201 IVMWEVMTYGERPYWELSNHE----------------------VMKAINDGFRLPTPMDC 238

Query: 326 AEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
              +  L +QC  ++  +RP    +  ++ K+
Sbjct: 239 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 270

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (216), Expect = 5e-20
 Identities = 45/274 (16%), Positives = 96/274 (35%), Gaps = 40/274 (14%)

Query: 107 ASWRGTIRGKDVIIFQRKLRRSLDLEQLRERL---SVICRSHHSSLIKLLGACVSGNCGY 163
             W        + +  ++LR +   +  +E L    V+    +  + +LLG C++     
Sbjct: 28  GLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 87

Query: 164 LVYEHVSGANLADCLRNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGS 210
           +      G  L     +  N     L  W       ++ ++   ++   ++  N      
Sbjct: 88  ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP 147

Query: 211 LCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLE 270
              KI  FG A+L G  +  +       +    +MA E     + T + DV+++GV V E
Sbjct: 148 QHVKITDFGLAKLLG--AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWE 205

Query: 271 LLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMV 330
           L++          +GI                      +   +++  +   P      + 
Sbjct: 206 LMTFGS----KPYDGIPASE------------------ISSILEKGERLPQPPICTIDVY 243

Query: 331 LLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNW 364
           ++ ++C   D   RP  R++    SKM  + + +
Sbjct: 244 MIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 277

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.4 bits (216), Expect = 5e-20
 Identities = 37/252 (14%), Positives = 80/252 (31%), Gaps = 54/252 (21%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
            +     + +   + + + +  + +  H + I+  G  +  +  +LV E+  G+      
Sbjct: 47  KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106

Query: 179 RNPRNPSFTVLSTWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTA 221
            + +      ++                       ++ +I++SE        K+  FG+A
Sbjct: 107 VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG----LVKLGDFGSA 162

Query: 222 ELCGEVSGNESGKVNKIEGTRGYMAPEF---QASGVVTQKCDVYAFGVVVLELLSGEEVL 278
            +            N   GT  +MAPE       G    K DV++ G+  +EL   +  L
Sbjct: 163 SIMAP--------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214

Query: 279 KFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVD 338
                        +S +             + +     L+  +  E     V     C+ 
Sbjct: 215 --------FNMNAMSALYH-----------IAQNESPALQSGHWSEYFRNFV---DSCLQ 252

Query: 339 EDPGKRPDMRQV 350
           + P  RP    +
Sbjct: 253 KIPQDRPTSEVL 264

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 2e-19
 Identities = 50/265 (18%), Positives = 92/265 (34%), Gaps = 60/265 (22%)

Query: 123 RKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNP 181
           ++   S + E L   L ++ +   H +++ LLGAC      YL++E+    +L + LR+ 
Sbjct: 76  KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 135

Query: 182 RNPSFTVLSTW------------------------------LSRMQSSSII---VSEEN- 207
           R         +                              +  ++  S +   ++  N 
Sbjct: 136 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV 195

Query: 208 --AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG 265
                   KIC FG A     +S +             +MAPE    G+ T K DV+++G
Sbjct: 196 LVTHGKVVKICDFGLARDI--MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG 253

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEV 325
           +++ E+ S           G++ Y  + V                K +    K   P   
Sbjct: 254 ILLWEIFSL----------GVNPYPGIPVDAN-----------FYKLIQNGFKMDQPFYA 292

Query: 326 AEKMVLLGLQCVDEDPGKRPDMRQV 350
            E++ ++   C   D  KRP    +
Sbjct: 293 TEEIYIIMQSCWAFDSRKRPSFPNL 317

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 6e-19
 Identities = 38/262 (14%), Positives = 90/262 (34%), Gaps = 53/262 (20%)

Query: 115 GKDVII--FQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACV--SGNCGYLVYEHVS 170
           GK ++            + + L   ++++    H ++++     +  +    Y+V E+  
Sbjct: 29  GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 88

Query: 171 GANLADCLRNPRNPSFTVLSTWLSRM----------------QSSSII---VSEEN---A 208
           G +LA  +         +   ++ R+                   +++   +   N    
Sbjct: 89  GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV 268
           G    K+  FG A +       ++       GT  YM+PE        +K D+++ G ++
Sbjct: 149 GKQNVKLGDFGLARILNH----DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 204

Query: 269 LELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEK 328
            EL +        F      + +  +  K           +R+   RR+   Y  E+ E 
Sbjct: 205 YELCAL----MPPF----TAFSQKELAGK-----------IREGKFRRIPYRYSDELNE- 244

Query: 329 MVLLGLQCVDEDPGKRPDMRQV 350
              +  + ++     RP + ++
Sbjct: 245 ---IITRMLNLKDYHRPSVEEI 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 84.7 bits (209), Expect = 7e-19
 Identities = 48/254 (18%), Positives = 84/254 (33%), Gaps = 45/254 (17%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G+  +         LD   ++  +S++ + HH  LI L  A        L+ E +SG  L
Sbjct: 54  GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 113

Query: 175 ADCLRNPRNP-SFTVLSTWLSRM-----------------QSSSIIVSEENAGSLCAKIC 216
            D +       S   +  ++ +                  +  +I+   + A S+  KI 
Sbjct: 114 FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSV--KII 171

Query: 217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEE 276
            FG A        N    V     T  + APE      V    D++A GV+   LLSG  
Sbjct: 172 DFGLATKL-----NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL- 225

Query: 277 VLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQC 336
              F  ++ ++  + V                  K  D    +     V+ +        
Sbjct: 226 -SPFAGEDDLETLQNV------------------KRCDWEFDEDAFSSVSPEAKDFIKNL 266

Query: 337 VDEDPGKRPDMRQV 350
           + ++P KR  +   
Sbjct: 267 LQKEPRKRLTVHDA 280

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 84.0 bits (207), Expect = 1e-18
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 41/252 (16%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
           G +            D E +R+ +  +    H +L+ L  A    N   ++YE +SG  L
Sbjct: 51  GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 110

Query: 175 ADCLRNPRNPS--------FTVLSTWLSRMQSSSII---VSEEN-----AGSLCAKICHF 218
            + + +  N             +   L  M  ++ +   +  EN       S   K+  F
Sbjct: 111 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDF 170

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVL 278
           G          +    V    GT  + APE      V    D+++ GV+   LLSG    
Sbjct: 171 GLTAHL-----DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL--S 223

Query: 279 KFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVD 338
            F  +   +  R V                  K  D  + DS    ++E       + + 
Sbjct: 224 PFGGENDDETLRNV------------------KSCDWNMDDSAFSGISEDGKDFIRKLLL 265

Query: 339 EDPGKRPDMRQV 350
            DP  R  + Q 
Sbjct: 266 ADPNTRMTIHQA 277

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.0 bits (202), Expect = 4e-18
 Identities = 40/244 (16%), Positives = 81/244 (33%), Gaps = 41/244 (16%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR 182
            K         +   ++V+ +  H +++ L     SG   YL+ + VSG  L D +    
Sbjct: 43  AKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG 102

Query: 183 NPSFTVLSTW-------LSRMQSSSIIVSEENAGSLC---------AKICHFGTAELCGE 226
             +    S         +  +    I+  +    +L            I  FG +++   
Sbjct: 103 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME-- 160

Query: 227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI 286
              +    ++   GT GY+APE  A    ++  D ++ GV+   LL G     F  +   
Sbjct: 161 ---DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY--PPFYDENDA 215

Query: 287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD 346
             + ++                     +      Y  ++++         +++DP KR  
Sbjct: 216 KLFEQI------------------LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT 257

Query: 347 MRQV 350
             Q 
Sbjct: 258 CEQA 261

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 1e-17
 Identities = 36/246 (14%), Positives = 80/246 (32%), Gaps = 37/246 (15%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD-C 177
            +    L +   ++     ++ +    H +LI+L G  ++     +V E     +L D  
Sbjct: 43  CLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRL 101

Query: 178 LRNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELC 224
            ++  +     LS +       +  ++S   I   ++  N   A     KI  FG     
Sbjct: 102 RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161

Query: 225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDE 284
            + + +        +    + APE   +   +   D + FGV + E+ +           
Sbjct: 162 PQ-NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT----------- 209

Query: 285 GIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR 344
               Y +   +      +      + K      +   P +  + +  + +QC    P  R
Sbjct: 210 ----YGQEPWIGLNGSQI------LHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259

Query: 345 PDMRQV 350
           P    +
Sbjct: 260 PTFVAL 265

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 1e-17
 Identities = 46/262 (17%), Positives = 85/262 (32%), Gaps = 53/262 (20%)

Query: 118 VIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADC 177
           V + +         + + E   +     H ++I LLGAC      Y++ E+ S  NL + 
Sbjct: 50  VKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 109

Query: 178 LRNPRNPSFTVLSTW-----------------------LSRMQSSSII---VSEEN---A 208
           L+  R P                               +  + S   I   ++  N    
Sbjct: 110 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169

Query: 209 GSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVV 268
                KI  FG A     +   +     +      +MAPE     + T + DV++FGV++
Sbjct: 170 EDNVMKIADFGLARDIHHIDYYKKTTNGR--LPVKWMAPEALFDRIYTHQSDVWSFGVLL 227

Query: 269 LELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEK 328
            E+ +               Y  V V +            + K +    +   P     +
Sbjct: 228 WEIFTLGGSP----------YPGVPVEE------------LFKLLKEGHRMDKPSNCTNE 265

Query: 329 MVLLGLQCVDEDPGKRPDMRQV 350
           + ++   C    P +RP  +Q+
Sbjct: 266 LYMMMRDCWHAVPSQRPTFKQL 287

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.9 bits (196), Expect = 2e-17
 Identities = 47/296 (15%), Positives = 96/296 (32%), Gaps = 73/296 (24%)

Query: 107 ASWRGTIRGKDVIIFQRK-LRRSLD---LEQLRERLSVICRSHHSSLIKLLGACVSGNCG 162
           A   G +  +   +   K L+           +   +++    + +++KLLG C  G   
Sbjct: 32  ARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 91

Query: 163 YLVYEHVSGANLADCLRNPRNPSFTVLS------------------TWLSRMQ------- 197
            L++E+++  +L + LR+    +   LS                  +   ++        
Sbjct: 92  CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAA 151

Query: 198 ----------------SSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGT 241
                           + + +V E     +  KI  FG +      S +           
Sbjct: 152 GMAYLSERKFVHRDLATRNCLVGEN----MVVKIADFGLSRNIY--SADYYKADGNDAIP 205

Query: 242 RGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEA 301
             +M PE       T + DV+A+GVV+ E+ S           G+  Y  ++  +     
Sbjct: 206 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY----------GLQPYYGMAHEE----- 250

Query: 302 VAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM 357
                  V  +V      + P     ++  L   C  + P  RP    +  ++ +M
Sbjct: 251 -------VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (196), Expect = 2e-17
 Identities = 48/271 (17%), Positives = 93/271 (34%), Gaps = 51/271 (18%)

Query: 107 ASWRGTIRGKDVIIFQRK-LRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCG 162
              +G ++ +       K +  +    +  +     SV+   +   +++LLG    G   
Sbjct: 39  GVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 98

Query: 163 YLVYEHVSGANLADCLRNPR-----NPSFTVLSTW------------LSRMQSSSII--- 202
            ++ E ++  +L   LR+ R     NP     S              ++ + ++  +   
Sbjct: 99  LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 158

Query: 203 VSEEN---AGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKC 259
           ++  N   A     KI  FG      E   +   K  K      +M+PE    GV T   
Sbjct: 159 LAARNCMVAEDFTVKIGDFGMTRDIYE--TDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 216

Query: 260 DVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKD 319
           DV++FGVV+ E+ +  E       +G+   +                  V ++V      
Sbjct: 217 DVWSFGVVLWEIATLAE----QPYQGLSNEQ------------------VLRFVMEGGLL 254

Query: 320 SYPVEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
             P    + +  L   C   +P  RP   ++
Sbjct: 255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 285

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 9e-17
 Identities = 34/255 (13%), Positives = 78/255 (30%), Gaps = 44/255 (17%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL 174
                      +   +LE     + ++    H +++KLL A    N  +++ E  +G  +
Sbjct: 37  SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 96

Query: 175 ADCLRNPRNP-SFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGT 220
              +     P + + +          L+ +  + II   +   N         K+  FG 
Sbjct: 97  DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 156

Query: 221 AELCGEVSGNESGKVNKIEGTRGYMAPEF-----QASGVVTQKCDVYAFGVVVLELLSGE 275
           +            + +   GT  +MAPE              K DV++ G+ ++E+   E
Sbjct: 157 SAKN----TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 212

Query: 276 EVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQ 335
                     +    +++                          + P   +        +
Sbjct: 213 --PPHHELNPMRVLLKIA-------------------KSEPPTLAQPSRWSSNFKDFLKK 251

Query: 336 CVDEDPGKRPDMRQV 350
           C++++   R    Q+
Sbjct: 252 CLEKNVDARWTTSQL 266

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 76.8 bits (188), Expect = 2e-16
 Identities = 34/268 (12%), Positives = 69/268 (25%), Gaps = 38/268 (14%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEHVSGAN 173
           G++V I  +         QL     +         I  +  C + G+   +V E +  + 
Sbjct: 32  GEEVAI--KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSL 89

Query: 174 LADCLRNPRNPSFTVLSTWLSRMQS----------------SSIIVSEENAGSLCAKICH 217
                   R  S   +     +M S                    +           I  
Sbjct: 90  EDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIID 149

Query: 218 FGTAELCGEVSGNE---SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG 274
           FG A+   +   ++     +   + GT  Y +         +++ D+ + G V++    G
Sbjct: 150 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 209

Query: 275 EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGL 334
               + +                  +                L   YP E A  +     
Sbjct: 210 SLPWQGLKAATKR------------QKYERISEKKMSTPIEVLCKGYPSEFATYL----N 253

Query: 335 QCVDEDPGKRPDMRQVTGLVSKMYLESK 362
            C       +PD   +  L   ++    
Sbjct: 254 FCRSLRFDDKPDYSYLRQLFRNLFHRQG 281

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 2e-16
 Identities = 50/265 (18%), Positives = 88/265 (33%), Gaps = 61/265 (23%)

Query: 120 IFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEHVSGANLADCL 178
           + +     S     + E   +I   HH +++ LLGAC   G    ++ E     NL+  L
Sbjct: 50  MLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 109

Query: 179 RNPRNPSFTVLSTWLSR---------------------------------MQSSSIIVSE 205
           R+ RN                                             + + +I++SE
Sbjct: 110 RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169

Query: 206 ENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFG 265
           +N      KIC FG A    +    +  +         +MAPE     V T + DV++FG
Sbjct: 170 KN----VVKICDFGLARDIYKDP--DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 223

Query: 266 VVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEV 325
           V++ E+ S               Y  V + ++             + +    +   P   
Sbjct: 224 VLLWEIFSLGASP----------YPGVKIDEE-----------FCRRLKEGTRMRAPDYT 262

Query: 326 AEKMVLLGLQCVDEDPGKRPDMRQV 350
             +M    L C   +P +RP   ++
Sbjct: 263 TPEMYQTMLDCWHGEPSQRPTFSEL 287

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 2e-16
 Identities = 31/243 (12%), Positives = 83/243 (34%), Gaps = 45/243 (18%)

Query: 126 RRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPRNP- 184
            +  D   +++ +S++  + H +++ L  +  S     +++E +SG ++ + +       
Sbjct: 40  VKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFEL 99

Query: 185 SFTVLSTWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTAELCGEV 227
           +   + +++ ++                 +  +II     + ++  KI  FG A      
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTI--KIIEFGQARQL--- 154

Query: 228 SGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID 287
                     +     Y APE     VV+   D+++ G +V  LLSG     F+ +    
Sbjct: 155 --KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI--NPFLAETNQQ 210

Query: 288 GYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDM 347
               +                     +    +    E++ + +    + + ++   R   
Sbjct: 211 IIENI------------------MNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252

Query: 348 RQV 350
            + 
Sbjct: 253 SEA 255

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.8 bits (183), Expect = 7e-16
 Identities = 44/244 (18%), Positives = 82/244 (33%), Gaps = 38/244 (15%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS----GNCGYLVYEHVSGANL 174
           ++     R      + R         +H +++ +     +    G   Y+V E+V G  L
Sbjct: 39  VLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL 98

Query: 175 ADCLRNPRNPS-------FTVLSTWLSRMQSSSII---VSEENA---GSLCAKICHFGTA 221
            D +      +              L+    + II   V   N     +   K+  FG A
Sbjct: 99  RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA 158

Query: 222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFV 281
               + SGN   +   + GT  Y++PE      V  + DVY+ G V+ E+L+GE    F 
Sbjct: 159 RAIAD-SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE--PPFT 215

Query: 282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP 341
            D  +    +                      D     +    ++  +  + L+ + ++P
Sbjct: 216 GDSPVSVAYQH------------------VREDPIPPSARHEGLSADLDAVVLKALAKNP 257

Query: 342 GKRP 345
             R 
Sbjct: 258 ENRY 261

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 1e-15
 Identities = 44/254 (17%), Positives = 87/254 (34%), Gaps = 40/254 (15%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR 182
           +        E+  +    + +  H  ++KL+G   + N  +++ E  +   L   L+  +
Sbjct: 44  KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK 102

Query: 183 NPS--------FTVLSTWLSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCGEVS 228
                         LST L+ ++S   +   ++  N   + + C K+  FG +     + 
Sbjct: 103 YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY---ME 159

Query: 229 GNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDG 288
            +   K +K +    +MAPE       T   DV+ FGV + E+L                
Sbjct: 160 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN---- 215

Query: 289 YRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR 348
                               V   ++   +   P      +  L  +C   DP +RP   
Sbjct: 216 ------------------NDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 257

Query: 349 QVTGLVSKMYLESK 362
           ++   +S +  E K
Sbjct: 258 ELKAQLSTILEEEK 271

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 74.5 bits (182), Expect = 1e-15
 Identities = 39/266 (14%), Positives = 79/266 (29%), Gaps = 40/266 (15%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGAN 173
            + V I  +   R  D  QLR+        +  + +  +      G    LV + +  + 
Sbjct: 30  NQQVAI--KFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSL 87

Query: 174 LADCLRNPRNPSFTVLSTWLSRMQS-----------------SSIIVSEEN-AGSLCAKI 215
                   R  S   ++    +M +                  + ++   N   +    +
Sbjct: 88  EDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYV 147

Query: 216 CHFGTAELCGEVSGNESGKVNK---IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELL 272
             FG  +   +    +     +   + GT  YM+         +++ D+ A G V +  L
Sbjct: 148 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 207

Query: 273 SGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLL 332
            G         +G+         ++  E         +    R L   +P E  + M   
Sbjct: 208 RGSL-----PWQGLKAATNKQKYERIGE-------KKQSTPLRELCAGFPEEFYKYM--- 252

Query: 333 GLQCVDEDPGKRPDMRQVTGLVSKMY 358
                +      PD   + GL SK+ 
Sbjct: 253 -HYARNLAFDATPDYDYLQGLFSKVL 277

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 2e-15
 Identities = 41/245 (16%), Positives = 85/245 (34%), Gaps = 42/245 (17%)

Query: 119 IIFQRKLRRSLDLEQ-LRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADC 177
            + +  +    D+E  + E+  +     H  L  +     +    + V E+++G +L   
Sbjct: 34  ALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH 93

Query: 178 LRNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELC 224
           +++      +  + +       L  + S  I+   +  +N         KI  FG  +  
Sbjct: 94  IQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK-- 151

Query: 225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDE 284
              +     K N   GT  Y+APE           D ++FGV++ E+L G+    F   +
Sbjct: 152 --ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQD 207

Query: 285 GIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKR 344
             + +  +                      R     YP  + ++   L ++    +P KR
Sbjct: 208 EEELFHSI----------------------RMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245

Query: 345 PDMRQ 349
             +R 
Sbjct: 246 LGVRG 250

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.4 bits (177), Expect = 6e-15
 Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 44/246 (17%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           ++ +  + R   +E   +   ++    H  +I++ G        +++ +++ G  L   L
Sbjct: 36  VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL 95

Query: 179 RNPRNPSFTV-------LSTWLSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCG 225
           R  +     V       +   L  + S  II   +  EN     +   KI  FG A+   
Sbjct: 96  RKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 155

Query: 226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG 285
           +           + GT  Y+APE  ++    +  D ++FG+++ E+L+G     F     
Sbjct: 156 D-------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY--TPFYDSNT 206

Query: 286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP 345
           +  Y ++                         +  +P    E +  L  + +  D  +R 
Sbjct: 207 MKTYEKI----------------------LNAELRFPPFFNEDVKDLLSRLITRDLSQRL 244

Query: 346 DMRQVT 351
              Q  
Sbjct: 245 GNLQNG 250

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 2e-14
 Identities = 38/244 (15%), Positives = 83/244 (34%), Gaps = 44/244 (18%)

Query: 130 DLEQLRERLSVICR-SHHSSLIKLLGAC----VSGNCGYLVYEHVSGANLADCLRNPRNP 184
           D  + R  + +  R S    +++++           C  +V E + G  L   +++  + 
Sbjct: 47  DCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ 106

Query: 185 SFTVLSTW---------LSRMQSSSI---------IVSEENAGSLCAKICHFGTAELCGE 226
           +FT              +  + S +I         ++      +   K+  FG A+    
Sbjct: 107 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET-- 164

Query: 227 VSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGI 286
                   +     T  Y+APE        + CD+++ GV++  LL G       F    
Sbjct: 165 ---TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG----YPPFY--- 214

Query: 287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD 346
                         A++ G+    +       +    EV+E++ +L    +  +P +R  
Sbjct: 215 ---------SNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 265

Query: 347 MRQV 350
           + + 
Sbjct: 266 ITEF 269

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 2e-14
 Identities = 42/253 (16%), Positives = 72/253 (28%), Gaps = 57/253 (22%)

Query: 116 KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA 175
           KD I    +L     +      L  +  S  S +I+LL      +   L+ E        
Sbjct: 39  KDRISDWGELPNGTRVPMEVVLLKKV-SSGFSGVIRLLDWFERPDSFVLILERPEPVQDL 97

Query: 176 DCLRNPRNP-----------------SFTVLSTWLSRMQSSSIIVSEENAGSLCAKICHF 218
                 R                           L R      I+ + N G L  K+  F
Sbjct: 98  FDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL--KLIDF 155

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGEEV 277
           G+  L       +       +GTR Y  PE  +      +   V++ G+++ +++ G   
Sbjct: 156 GSGALL------KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG--- 206

Query: 278 LKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCV 337
               F+                E +  G    R+ V    +             L   C+
Sbjct: 207 -DIPFE--------------HDEEIIRGQVFFRQRVSSECQH------------LIRWCL 239

Query: 338 DEDPGKRPDMRQV 350
              P  RP   ++
Sbjct: 240 ALRPSDRPTFEEI 252

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 69.3 bits (169), Expect = 5e-14
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 52/261 (19%)

Query: 113 IRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA 172
           I       F  +  + L    L+E   +   S H ++I+L     +    +LV++ +   
Sbjct: 36  IDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG 95

Query: 173 NLADCLRNPRNPSFTVLSTWLSRM-----------------QSSSIIVSEENAGSLCAKI 215
            L D L      S       +  +                 +  +I++ ++       K+
Sbjct: 96  ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM----NIKL 151

Query: 216 CHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEF------QASGVVTQKCDVYAFGVVVL 269
             FG +        +   K+ ++ GT  Y+APE              ++ D+++ GV++ 
Sbjct: 152 TDFGFSCQL-----DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 206

Query: 270 ELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKM 329
            LL+G     F   + +   R +                     + +       + ++ +
Sbjct: 207 TLLAGS--PPFWHRKQMLMLRMI------------------MSGNYQFGSPEWDDYSDTV 246

Query: 330 VLLGLQCVDEDPGKRPDMRQV 350
             L  + +   P KR    + 
Sbjct: 247 KDLVSRFLVVQPQKRYTAEEA 267

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 69.1 bits (168), Expect = 6e-14
 Identities = 40/253 (15%), Positives = 86/253 (33%), Gaps = 28/253 (11%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
            I   K    +    +RE +S++    HS+++KL     +     LV+EH+         
Sbjct: 33  KIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD 91

Query: 179 RNPRNPSFTVLSTW-------LSRMQSSSIIVSEENAGSLC------AKICHFGTAELCG 225
                       ++       ++      ++  +    +L        KI  FG A   G
Sbjct: 92  VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFG 151

Query: 226 EVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDE 284
                 + ++        Y AP+    S   +   D+++ G +  E+++G     F    
Sbjct: 152 IPVRKYTHEIVT----LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT--PLFPGVS 205

Query: 285 GIDGYRRV-SVVDKASEAVAGGVGGVRKWV------DRRLKDSYPVEVAEKMVLLGLQCV 337
             D   R+  ++   +      V  + K+       +    +S+   + E  + L  + +
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265

Query: 338 DEDPGKRPDMRQV 350
             DP +R   +Q 
Sbjct: 266 KLDPNQRITAKQA 278

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.6 bits (167), Expect = 2e-13
 Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 43/250 (17%)

Query: 118 VIIFQRKLRRSLDLEQLRER--LSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA 175
            +  +R   +  +   L ER  LS++       ++ +  A  + +    + + ++G +L 
Sbjct: 36  CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 95

Query: 176 DCLRNPRNPSFTVLSTW-------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAE 222
             L      S   +  +       L  M +  ++   +   N         +I   G A 
Sbjct: 96  YHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC 155

Query: 223 LCGEVSGNESGKVNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFV 281
              +       K +   GT GYMAPE    GV      D ++ G ++ +LL G     F 
Sbjct: 156 DFSK------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS--PFR 207

Query: 282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP 341
             +  D +                    R  +   ++   P   + ++  L    +  D 
Sbjct: 208 QHKTKDKHEI-----------------DRMTLTMAVE--LPDSFSPELRSLLEGLLQRDV 248

Query: 342 GKRPDMRQVT 351
            +R       
Sbjct: 249 NRRLGCLGRG 258

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 2e-13
 Identities = 39/259 (15%), Positives = 87/259 (33%), Gaps = 34/259 (13%)

Query: 116 KDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA 175
           K + +  R   +          + ++    H ++I LL A    +   LV++ +      
Sbjct: 29  KKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEV 88

Query: 176 DCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHF 218
               N    + + +  ++                   ++ +++++ E        K+  F
Sbjct: 89  IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG----VLKLADF 144

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGEEV 277
           G A+  G  +   + +V     TR Y APE    + +     D++A G ++ ELL     
Sbjct: 145 GLAKSFGSPNRAYTHQV----VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF 200

Query: 278 LKFVFDEGIDGYRRV-SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVE-----VAEKMVL 331
                D  +D   R+   +   +E     +  +  +V  +     P+        + ++ 
Sbjct: 201 --LPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLD 258

Query: 332 LGLQCVDEDPGKRPDMRQV 350
           L       +P  R    Q 
Sbjct: 259 LIQGLFLFNPCARITATQA 277

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 3e-13
 Identities = 38/262 (14%), Positives = 76/262 (29%), Gaps = 31/262 (11%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSG--------NCGYLVYEHVS 170
            +     +    +  LRE + ++    H +++ L+  C +            YLV++   
Sbjct: 42  KVLMENEKEGFPITALRE-IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE 100

Query: 171 GANLADCLRNPRNPS-------FTVLSTWLSRMQSSSII---VSEEN---AGSLCAKICH 217
                         +         +L   L  +  + I+   +   N         K+  
Sbjct: 101 HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLAD 160

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEF-QASGVVTQKCDVYAFGVVVLELLSGE- 275
           FG A        ++  +      T  Y  PE            D++  G ++ E+ +   
Sbjct: 161 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 220

Query: 276 ------EVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKM 329
                 E  +      + G     V              + K   R++KD     V +  
Sbjct: 221 IMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY 280

Query: 330 VL-LGLQCVDEDPGKRPDMRQV 350
            L L  + +  DP +R D    
Sbjct: 281 ALDLIDKLLVLDPAQRIDSDDA 302

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 3e-13
 Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 33/258 (12%)

Query: 119 IIFQRKLRRSLDLEQLRER--LSVICRSHHSSLIKLLGACVSG-----NCGYLVYEHVSG 171
            +  +     + L  +RE   L  +    H ++++L   C            LV+EHV  
Sbjct: 40  RVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ 99

Query: 172 ANLADCLRNPRNPSFTVLSTW--------LSRMQSSSII---VSEEN---AGSLCAKICH 217
                  + P     T             L  + S  ++   +  +N     S   K+  
Sbjct: 100 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 159

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEV 277
           FG A +      +    +  +  T  Y APE           D+++ G +  E+   +  
Sbjct: 160 FGLARIY-----SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK-- 212

Query: 278 LKFVFDEGIDGYRRV-SVVDKASEAVAGGVGGVRKWV----DRRLKDSYPVEVAEKMVLL 332
             F     +D   ++  V+    E        + +        +  + +  ++ E    L
Sbjct: 213 PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 272

Query: 333 GLQCVDEDPGKRPDMRQV 350
            L+C+  +P KR      
Sbjct: 273 LLKCLTFNPAKRISAYSA 290

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 2e-11
 Identities = 41/252 (16%), Positives = 88/252 (34%), Gaps = 25/252 (9%)

Query: 123 RKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVY----EHVSGANLADCL 178
                    ++    + ++ R  H ++I +     +     +       H+ GA+L   L
Sbjct: 42  SPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL 101

Query: 179 RNPRNPSFTVLSTW------LSRMQSSSII---VSEEN---AGSLCAKICHFGTAELCGE 226
           +     +  +          L  + S++++   +   N     +   KIC FG A +   
Sbjct: 102 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161

Query: 227 VSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGE-------EVL 278
              + +G + +   TR Y APE    S   T+  D+++ G ++ E+LS          + 
Sbjct: 162 -DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

Query: 279 KFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVD 338
           +     GI G      ++      A          ++   +        K + L  + + 
Sbjct: 221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLT 280

Query: 339 EDPGKRPDMRQV 350
            +P KR ++ Q 
Sbjct: 281 FNPHKRIEVEQA 292

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 7e-11
 Identities = 39/267 (14%), Positives = 85/267 (31%), Gaps = 51/267 (19%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           I+ +  +    ++        V+  + H  L  L  A  + +    V E+ +G  L   L
Sbjct: 37  ILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96

Query: 179 RNPRNPSFTVLSTWLSR-----------------MQSSSIIVSEENAGSLCAKICHFGTA 221
              R  +      + +                  ++  ++++ ++       KI  FG  
Sbjct: 97  SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG----HIKITDFGLC 152

Query: 222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFV 281
           +       ++   +    GT  Y+APE        +  D +  GVV+ E++ G   L F 
Sbjct: 153 KEGI----SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR--LPFY 206

Query: 282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP 341
             +    +  +                         +  +P  ++ +   L    + +DP
Sbjct: 207 NQDHERLFELI----------------------LMEEIRFPRTLSPEAKSLLAGLLKKDP 244

Query: 342 GKRPDMRQVTG--LVSKMYLESKNWAD 366
            +R          ++   +  S NW D
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFLSINWQD 271

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 1e-10
 Identities = 47/255 (18%), Positives = 83/255 (32%), Gaps = 31/255 (12%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
            I        +    +RE +S++   +H +++KLL    + N  YLV+E +         
Sbjct: 34  KIRLDTETEGVPSTAIRE-ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 92

Query: 179 RNPRNPSFTVLSTW--------LSRMQSSSII------VSEENAGSLCAKICHFGTAELC 224
            +        L           L+   S  ++       +         K+  FG A   
Sbjct: 93  ASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF 152

Query: 225 GEVSGNESGKVNKIEGTRGYMAPEFQA-SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFD 283
           G      + +V     T  Y APE        +   D+++ G +  E+++   +  F  D
Sbjct: 153 GVPVRTYTHEV----VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRAL--FPGD 206

Query: 284 EGIDGYRRV--------SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQ 335
             ID   R+         VV     ++        KW  +      P    +   LL  Q
Sbjct: 207 SEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLL-SQ 265

Query: 336 CVDEDPGKRPDMRQV 350
            +  DP KR   +  
Sbjct: 266 MLHYDPNKRISAKAA 280

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 56.8 bits (136), Expect = 1e-09
 Identities = 32/268 (11%), Positives = 89/268 (33%), Gaps = 43/268 (16%)

Query: 115 GKDVIIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVS--GNCGYLVYEHVSG 171
            + V++   K+ + +  ++++  + ++       ++I L             LV+EHV+ 
Sbjct: 60  NEKVVV---KILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 116

Query: 172 ANLADCLRNP-----RNPSFTVLS---------TWLSRMQSSSIIVSEENAGSLCAKICH 217
            +     +       R   + +L               ++  ++++  E+      ++  
Sbjct: 117 TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR---KLRLID 173

Query: 218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEE 276
           +G AE       +   + N    +R +  PE      +     D+++ G ++  ++  +E
Sbjct: 174 WGLAEFY-----HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKE 228

Query: 277 --------------VLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYP 322
                         + K +  E +  Y     ++             RK  +R +     
Sbjct: 229 PFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQ 288

Query: 323 VEVAEKMVLLGLQCVDEDPGKRPDMRQV 350
             V+ + +    + +  D   R   R+ 
Sbjct: 289 HLVSPEALDFLDKLLRYDHQSRLTAREA 316

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 1e-08
 Identities = 48/267 (17%), Positives = 91/267 (34%), Gaps = 41/267 (15%)

Query: 118 VIIFQRKLRRSLDLEQLRERLSVICR-SHHSSLIKLLGACVSGNCGYLVYEHVSGANLAD 176
           V+     ++++   E  R    V+        L+ L  A  +    +L+ ++++G  L  
Sbjct: 59  VLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT 118

Query: 177 CLRNPRNPS-------FTVLSTWLSRMQSSSII---VSEEN---AGSLCAKICHFGTAEL 223
            L      +          +   L  +    II   +  EN     +    +  FG   L
Sbjct: 119 HLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG---L 175

Query: 224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGV--VTQKCDVYAFGVVVLELLSGEEVLKFV 281
             E   +E+ +     GT  YMAP+    G     +  D ++ GV++ ELL+G     F 
Sbjct: 176 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFT 233

Query: 282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDP 341
            D   +    +                       + +  YP E++     L  + + +DP
Sbjct: 234 VDGEKNSQAEI------------------SRRILKSEPPYPQEMSALAKDLIQRLLMKDP 275

Query: 342 GKRPDMRQVTG--LVSKMYLESKNWAD 366
            KR          +   ++ +  NW D
Sbjct: 276 KKRLGCGPRDADEIKEHLFFQKINWDD 302

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 1e-08
 Identities = 32/257 (12%), Positives = 80/257 (31%), Gaps = 35/257 (13%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
            +        +    LRE + ++    H ++++L     S     LV+E           
Sbjct: 34  RVRLDDDDEGVPSSALRE-ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD 92

Query: 179 RNPRNPSFTVLSTWLSRM-----------------QSSSIIVSEENAGSLCAKICHFGTA 221
               +    ++ ++L ++                 +  +++++         K+ +FG A
Sbjct: 93  SCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG----ELKLANFGLA 148

Query: 222 ELCGEVSGNESGKVNKIEGTRGYMAPEFQA-SGVVTQKCDVYAFGVVVLELLSGEEVLKF 280
              G      S +V     T  Y  P+    + + +   D+++ G +  EL +    L F
Sbjct: 149 RAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL-F 203

Query: 281 VFDEGIDGYRRVSVV-------DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLG 333
             ++  D  +R+  +          S            +       +   ++      L 
Sbjct: 204 PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263

Query: 334 LQCVDEDPGKRPDMRQV 350
              +  +P +R    + 
Sbjct: 264 QNLLKCNPVQRISAEEA 280

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (123), Expect = 5e-08
 Identities = 39/252 (15%), Positives = 74/252 (29%), Gaps = 38/252 (15%)

Query: 130 DLEQLRERLSVICRSHHSSLIKLLGACVSGNCG------YLVYEHVSGANLADCLRNPR- 182
           D       L ++ +  H ++++L     S           LV ++V            R 
Sbjct: 56  DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115

Query: 183 NPSFTVLSTW---------LSRMQSSSIIVSE-------ENAGSLCAKICHFGTAELCGE 226
             +  V+            L+ + S  I   +        +  +   K+C FG+A+    
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-- 173

Query: 227 VSGNESGKVNKIEGTRGYMAP-EFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG 285
                         +R Y AP     +   T   DV++ G V+ ELL G+    F  D G
Sbjct: 174 ---VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ--PIFPGDSG 228

Query: 286 IDGYRRVSVV-------DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVD 338
           +D    +  V                      +         +      + + L  + ++
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288

Query: 339 EDPGKRPDMRQV 350
             P  R    + 
Sbjct: 289 YTPTARLTPLEA 300

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-07
 Identities = 41/253 (16%), Positives = 87/253 (34%), Gaps = 26/253 (10%)

Query: 120 IFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG-----YLVYEHVSGANL 174
              R  +  +  ++    L ++    H ++I LL                +  H+ GA+L
Sbjct: 50  KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 109

Query: 175 ADCLRNPRNPSFTVLSTW------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS 228
            + ++  +     V          L  + S+ II  +    +L             G ++
Sbjct: 110 NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG-LA 168

Query: 229 GNESGKVNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGID 287
            +   ++     TR Y APE   + +   Q  D+++ G ++ ELL+G     F   + ID
Sbjct: 169 RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHID 226

Query: 288 GYRRVSVVD----------KASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCV 337
             + +  +            +SE+    +  + +       + +       + LL  + +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL-EKML 285

Query: 338 DEDPGKRPDMRQV 350
             D  KR    Q 
Sbjct: 286 VLDSDKRITAAQA 298

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 2e-07
 Identities = 38/262 (14%), Positives = 77/262 (29%), Gaps = 44/262 (16%)

Query: 120 IFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG------YLVYEHVSGAN 173
              R  +  L  ++    L ++    H ++I LL               YLV   +    
Sbjct: 50  KLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL 109

Query: 174 LADCLRNPRNPSFTV---------------LSTWLSRMQSSSIIVSEENAGSLCAKICHF 218
                                                ++  ++ V+E+       KI  F
Sbjct: 110 GKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC----ELKILDF 165

Query: 219 GTAELCGEVSGNESGKVNKIEGTRGYMAPE-FQASGVVTQKCDVYAFGVVVLELLSGEEV 277
           G A            ++     TR Y APE        TQ  D+++ G ++ E+++G+  
Sbjct: 166 GLARQADS-------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK-- 216

Query: 278 LKFVFDEGIDGYRRV---------SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEK 328
             F   + +D  + +           V +     A         ++++   S     +  
Sbjct: 217 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPL 276

Query: 329 MVLLGLQCVDEDPGKRPDMRQV 350
            V L  + +  D  +R    + 
Sbjct: 277 AVNLLEKMLVLDAEQRVTAGEA 298

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 9e-07
 Identities = 42/267 (15%), Positives = 74/267 (27%), Gaps = 43/267 (16%)

Query: 120 IFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCG------YLVYEHVSGAN 173
              R  +     ++    L ++   +H ++I LL               YLV E +    
Sbjct: 49  KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANL 108

Query: 174 LADCLRNP-----RNPSFTVLST--WLSRMQSSSIIVSEENA---GSLCAKICHFGTAEL 223
                            + +L     L         +   N         KI  FG A  
Sbjct: 109 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168

Query: 224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFD 283
            G      S  +     TR Y APE        +  D+++ G ++ E++  +  + F   
Sbjct: 169 AGT-----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK--ILFPGR 221

Query: 284 EGIDGYRRV---------SVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGL 334
           + ID + +V           + K    V   V    K+        +P  +         
Sbjct: 222 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281

Query: 335 QCVDE-----------DPGKRPDMRQV 350
               +           DP KR  +   
Sbjct: 282 LKASQARDLLSKMLVIDPAKRISVDDA 308

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.5 bits (112), Expect = 1e-06
 Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 46/263 (17%)

Query: 119 IIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLADCL 178
           I+ ++K+ +   +E       ++   +   L+KL  +    +  Y+V E+V+G  +   L
Sbjct: 73  ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132

Query: 179 RNPRNPSFTVLSTWLSRM-------QSSSII---VSEEN---AGSLCAKICHFGTAELCG 225
           R     S      + +++        S  +I   +  EN         ++  FG A+   
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV- 191

Query: 226 EVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEG 285
                  G+   + GT   +APE   S    +  D +A GV++ E+ +G     F  D+ 
Sbjct: 192 ------KGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY--PPFFADQP 243

Query: 286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP 345
           I  Y ++                         K  +P   +  +  L    +  D  KR 
Sbjct: 244 IQIYEKI----------------------VSGKVRFPSHFSSDLKDLLRNLLQVDLTKRF 281

Query: 346 DMRQVTG--LVSKMYLESKNWAD 366
              +     + +  +  + +W  
Sbjct: 282 GNLKNGVNDIKNHKWFATTDWIA 304

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.2 bits (90), Expect = 6e-04
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 214 KICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS 273
           KI   G A                   TR Y +PE           D+++   ++ EL++
Sbjct: 172 KIADLGNA-------CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 224

Query: 274 GE 275
           G+
Sbjct: 225 GD 226

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	381
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.66
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.9
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.11
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.92
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	93.28

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-49  Score=362.78  Aligned_cols=250  Identities=19%  Similarity=0.296  Sum_probs=178.4

Q ss_pred             eeHHHHHHHhcCCc----------ccccccCCCceEEEEEEC--Cc---eEEEEEeccccc-ccHHHHHHHHHHHhhcCC
Q 016850           83 YHLSEICAATNNFL----------AKKFTSSSASASWRGTIR--GK---DVIIFQRKLRRS-LDLEQLRERLSVICRSHH  146 (381)
Q Consensus        83 ~~~~~~~~~~~~f~----------~~~lg~G~~g~V~~~~~~--~~---~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h  146 (381)
                      ++++|+..++.+|.          .+.||+|+||+||+|++.  ++   .||||+...... ...++|.+|+++|++|+|
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            45566666665553          346899999999999985  22   366666543322 245679999999999999


Q ss_pred             CCcceEEEEEEeCCeeeEEEeccCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCC
Q 016850          147 SSLIKLLGACVSGNCGYLVYEHVSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENA  208 (381)
Q Consensus       147 ~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~  208 (381)
                      ||||+++|++.+.+.+++|||||++|+|.+++.... ..++.++..++                 +||||+|||++.+  
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~--  164 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN--  164 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT--
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCC--
Confidence            999999999999999999999999999999988754 45554444333                 3567999999886  


Q ss_pred             CccceEEcccccccccccCCCCc-cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCc
Q 016850          209 GSLCAKICHFGTAELCGEVSGNE-SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGI  286 (381)
Q Consensus       209 ~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~  286 (381)
                        +++||+|||+++.+....... ........||+.|||||++.++.++.++|||||||++|||+| |++||......  
T Consensus       165 --~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--  240 (299)
T d1jpaa_         165 --LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--  240 (299)
T ss_dssp             --CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--
T ss_pred             --CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--
Confidence              679999999998764322111 112233568999999999999999999999999999999998 89999643210  


Q ss_pred             ccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          287 DGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                            .+.               ..+........+..+++.+.+||.+||+.||++|||+.||++.|++++.
T Consensus       241 ------~~~---------------~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         241 ------DVI---------------NAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             ------HHH---------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             ------HHH---------------HHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence                  111               1122222334455677889999999999999999999999999998865

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-49  Score=353.13  Aligned_cols=239  Identities=19%  Similarity=0.225  Sum_probs=183.3

Q ss_pred             cccccCCCceEEEEEEC----CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           98 KKFTSSSASASWRGTIR----GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ++||+|+||+||+|.+.    ++.||||++......  ..+++.+|+++|++|+|||||+++|+|.+ +..+||||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            46999999999999874    357899987543322  35789999999999999999999999865 457899999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|.+++......++..+..++.                 ||||+|||++.+    +.+||+|||+++.+.... .....
T Consensus        92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~----~~~kl~DFGla~~~~~~~-~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ----HYAKISDFGLSKALRADE-NYYKA  166 (277)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEET----TEEEECCCTTCEECCTTC-SEEEC
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccccc----Ccccccchhhhhhccccc-ccccc
Confidence            99999999877777665554433                 566899998876    569999999998764311 11222


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....||+.|||||++.+..++.++|||||||++|||++ |+.||.....           .+            +...+
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~-----------~~------------~~~~i  223 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG-----------SE------------VTAML  223 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----------HH------------HHHHH
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH-----------HH------------HHHHH
Confidence            345679999999999999999999999999999999998 8999964221           01            11112


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWA  365 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~  365 (381)
                      ....+...|..+++++.+||.+||+.||++|||+++|++.|++++.+..+..
T Consensus       224 ~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~e~  275 (277)
T d1xbba_         224 EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG  275 (277)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCCCC
Confidence            2222344555677899999999999999999999999999999988766553

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-49  Score=351.58  Aligned_cols=230  Identities=20%  Similarity=0.279  Sum_probs=176.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||+||+|++.  ++.||||++...... ..+.+.+|+++|++|+|||||++++++.+++.+|||||||++|
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg   88 (271)
T d1nvra_           9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG   88 (271)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCC
Confidence            3578999999999999985  789999997654332 3567899999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.++|......++..+..++.                 ||||+|||++++    +.+||+|||+|+.+..  .......
T Consensus        89 ~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~----~~~KL~DFG~a~~~~~--~~~~~~~  162 (271)
T d1nvra_          89 ELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDER----DNLKISDFGLATVFRY--NNRERLL  162 (271)
T ss_dssp             EGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT----CCEEECCCTTCEECEE--TTEECCB
T ss_pred             cHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCC----CCEEEccchhheeecc--CCccccc
Confidence            9999999877777665544433                 567999999876    5599999999987632  1222334


Q ss_pred             cccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ...+||+.|||||++.+..+ +.++|||||||++|||++|++||.......       ...              .....
T Consensus       163 ~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~-------~~~--------------~~~~~  221 (271)
T d1nvra_         163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------QEY--------------SDWKE  221 (271)
T ss_dssp             CCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS-------HHH--------------HHHHT
T ss_pred             cceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH-------HHH--------------HHHhc
Confidence            56789999999999988776 678999999999999999999996432210       000              00011


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..........+++++.+|+.+||+.||++|||++|+++
T Consensus       222 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         222 KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11111122345778999999999999999999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-48  Score=346.44  Aligned_cols=232  Identities=19%  Similarity=0.270  Sum_probs=171.8

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||+||+|++. ++.||||++.. .....+++.+|+++|++++|||||+++|+|.+.+.++||||||++|+|.
T Consensus        10 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~   88 (263)
T d1sm2a_          10 VQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS   88 (263)
T ss_dssp             EEEEECCSSCCEEEEEETTTEEEEEEECCS-SSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             EEEEeeCCCeEEEEEEECCCCEEEEEEECC-CcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHH
Confidence            567999999999999996 66799998654 3345688999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccccc
Q 016850          176 DCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVNK  237 (381)
Q Consensus       176 ~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~  237 (381)
                      +++.... ...+..+..+                 |+||||+|||++++    +.+||+|||+++.+..   ........
T Consensus        89 ~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~----~~~Kl~DFGla~~~~~---~~~~~~~~  161 (263)
T d1sm2a_          89 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGEN----QVIKVSDFGMTRFVLD---DQYTSSTG  161 (263)
T ss_dssp             HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGG----GCEEECSCC------------------
T ss_pred             HHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCC----CCeEecccchheeccC---CCceeecc
Confidence            9987654 3444433322                 24677999999987    6799999999987533   22222344


Q ss_pred             cCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhC-CccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          238 IEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSG-EEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       238 ~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..||+.|+|||++.+..|+.++|||||||++|||+|+ ++||.....        ..+...               +...
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~--------~~~~~~---------------i~~~  218 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVED---------------ISTG  218 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH--------HHHHHH---------------HHHT
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH--------HHHHHH---------------HHhc
Confidence            6799999999999999999999999999999999995 555532111        011111               1112


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      .....|..+++++.+||.+||+.||++|||++||++.|+++..
T Consensus       219 ~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         219 FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            2233345567789999999999999999999999999999854

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-49  Score=357.57  Aligned_cols=234  Identities=22%  Similarity=0.316  Sum_probs=183.8

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||+||+|++.  ++.||||++.. .....+++.+|+++|++|+|||||+++|+|.+++.++||||||++|+|
T Consensus        22 ~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l  100 (287)
T d1opja_          22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL  100 (287)
T ss_dssp             EEETTTTTTSSEEEEEEGGGTEEEEEEECCT-TCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             eeEEeeCCCeEEEEEEECCCCeEEEEEEECC-ccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcch
Confidence            567999999999999985  77899998643 334578899999999999999999999999999999999999999999


Q ss_pred             HHHhcCC--CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNP--RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~--~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .++|...  ...++..+..+                 |+||||+|||++.+    +.+||+|||+|+....   ......
T Consensus       101 ~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~----~~~Kl~DFG~a~~~~~---~~~~~~  173 (287)
T d1opja_         101 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN----HLVKVADFGLSRLMTG---DTYTAH  173 (287)
T ss_dssp             HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEECCCCCTTTCCS---SSSEEE
T ss_pred             HHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCC----CcEEEccccceeecCC---CCceee
Confidence            9999754  33343333222                 23667999999887    6799999999987532   222233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..|+.++|||||||++|||++|..||.....           ...           +.+.+..
T Consensus       174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~-----------~~~-----------~~~~i~~  231 (287)
T d1opja_         174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------LSQ-----------VYELLEK  231 (287)
T ss_dssp             TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC-----------HHH-----------HHHHHHT
T ss_pred             ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch-----------HHH-----------HHHHHhc
Confidence            445689999999999999999999999999999999997766532111           011           1122233


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ......+..+++++.+||.+||+.||++|||+.||++.|+.++.+
T Consensus       232 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         232 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            334455666778999999999999999999999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-47  Score=347.00  Aligned_cols=227  Identities=18%  Similarity=0.264  Sum_probs=180.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||+||+|++.  |+.||||++........+.+.+|+++|++++|||||++++++.+.+.+|||||||++|+
T Consensus        24 ~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~  103 (293)
T d1yhwa1          24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS  103 (293)
T ss_dssp             SCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             EEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCc
Confidence            4577999999999999975  88999999877666678889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          174 LADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       174 L~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      |.+++... .+++..+..++                 +||||+|||++.+    +.+||+|||+++.+..    ......
T Consensus       104 L~~~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~----~~vkl~DFG~a~~~~~----~~~~~~  174 (293)
T d1yhwa1         104 LTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD----GSVKLTDFGFCAQITP----EQSKRS  174 (293)
T ss_dssp             HHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----CCEEECCCTTCEECCS----TTCCBC
T ss_pred             HHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCC----CcEeeccchhheeecc----cccccc
Confidence            99988764 34544444333                 3567999999876    5699999999987532    222345


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ..+||+.|+|||++.+..|+.++|||||||++|||++|++||.....           .+........          ..
T Consensus       175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-----------~~~~~~~~~~----------~~  233 (293)
T d1yhwa1         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----------LRALYLIATN----------GT  233 (293)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHHHH----------CS
T ss_pred             ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCH-----------HHHHHHHHhC----------CC
Confidence            67899999999999999999999999999999999999999963211           1111111110          01


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .....+..+++.+++||.+||+.||.+|||+.|+++
T Consensus       234 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            112234556788999999999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-47  Score=347.28  Aligned_cols=233  Identities=20%  Similarity=0.290  Sum_probs=181.0

Q ss_pred             ccccCCCceEEEEEEC----CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           99 KFTSSSASASWRGTIR----GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        99 ~lg~G~~g~V~~~~~~----~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      +||+|+||+||+|.++    +..||||++..... ...+++.+|+++|++|+|||||+++|++.+ +.+|||||||++|+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~   94 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP   94 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence            5999999999999874    34689998754433 246789999999999999999999999875 45899999999999


Q ss_pred             HHHHhcCC-CCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNP-RNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~-~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++... ...++..+..++.                 ||||+|||++.+    +.+||+|||+++.+.... ......
T Consensus        95 L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~----~~~Kl~DFGla~~~~~~~-~~~~~~  169 (285)
T d1u59a_          95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNR----HYAKISDFGLSKALGADD-SYYTAR  169 (285)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEET----TEEEECCCTTCEECTTCS-CEECCC
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccC----Cceeeccchhhhcccccc-cccccc
Confidence            99998664 3455554444332                 566899999876    669999999998764321 122233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVD  314 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (381)
                      ....||+.|+|||++.++.++.++|||||||++|||+| |+.||......        .+.               ..+.
T Consensus       170 ~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--------~~~---------------~~i~  226 (285)
T d1u59a_         170 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--------EVM---------------AFIE  226 (285)
T ss_dssp             CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--------HHH---------------HHHH
T ss_pred             cccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--------HHH---------------HHHH
Confidence            45678999999999998999999999999999999998 89999643210        111               1122


Q ss_pred             ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          315 RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       315 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .......|..+++++.+||.+||+.||++|||+.+|++.|++++.+
T Consensus       227 ~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         227 QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            2223445566778999999999999999999999999999988765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-48  Score=349.55  Aligned_cols=226  Identities=13%  Similarity=0.212  Sum_probs=166.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--CCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS--GNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+||+|++.  |+.||+|++.....  ...+.+.+|+++|++++|||||++++++.+  ++.+|||||||
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~   87 (269)
T d2java1           8 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC   87 (269)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECC
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecC
Confidence            4578999999999999985  78899998765432  245678999999999999999999999865  56689999999


Q ss_pred             CCCCHHHHhcC----CCCCCccch----------------------HHHHHHhhhcceeecccCCCccceEEcccccccc
Q 016850          170 SGANLADCLRN----PRNPSFTVL----------------------STWLSRMQSSSIIVSEENAGSLCAKICHFGTAEL  223 (381)
Q Consensus       170 ~~gsL~~~l~~----~~~~~~~~~----------------------~~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~  223 (381)
                      ++|+|.+++..    ....++..+                      ..+|+||||+|||++.+    +.+||+|||+++.
T Consensus        88 ~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~----~~vkl~DFG~a~~  163 (269)
T d2java1          88 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLARI  163 (269)
T ss_dssp             TTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTT----SCEEECCHHHHHH
T ss_pred             CCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCC----CcEEEeeccceee
Confidence            99999999864    233332221                      14678899999999987    5699999999987


Q ss_pred             cccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHc
Q 016850          224 CGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVA  303 (381)
Q Consensus       224 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  303 (381)
                      +..    ........+||+.|||||++.+..|+.++|||||||++|||++|++||.....        ..+..   ... 
T Consensus       164 ~~~----~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--------~~~~~---~i~-  227 (269)
T d2java1         164 LNH----DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--------KELAG---KIR-  227 (269)
T ss_dssp             C---------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHH---HHH-
T ss_pred             ccc----CCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--------HHHHH---HHH-
Confidence            632    22233467899999999999999999999999999999999999999963211        01111   111 


Q ss_pred             CCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          304 GGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                .. .....+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       228 ----------~~-~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         228 ----------EG-KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ----------HT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----------cC-CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                      11 112234456788999999999999999999999975

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-48  Score=343.69  Aligned_cols=223  Identities=16%  Similarity=0.226  Sum_probs=178.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||+|++...   .....+.+.+|+++|++++|||||++++++.+++.+|||||||+
T Consensus        10 i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~   89 (263)
T d2j4za1          10 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP   89 (263)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecC
Confidence            4578999999999999985  778999987532   23356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.++|......++..+..++                 +||||+|||++.+    +.+||+|||+|+....      .
T Consensus        90 ~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~----~~~kl~DFG~a~~~~~------~  159 (263)
T d2j4za1          90 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA----GELKIADFGWSVHAPS------S  159 (263)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEECCCCSCSCCCC------C
T ss_pred             CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCC----CCEeecccceeeecCC------C
Confidence            99999999877766655544433                 3567999999877    5599999999976432      2


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|||||++.+..|+.++|||||||++|||++|+.||.....           .+......           
T Consensus       160 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----------~~~~~~i~-----------  217 (263)
T d2j4za1         160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----------QETYKRIS-----------  217 (263)
T ss_dssp             CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHH-----------
T ss_pred             cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH-----------HHHHHHHH-----------
Confidence            23457899999999999999999999999999999999999999963211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .  ....+|..+++++.+|+.+||+.||++|||+.|+++
T Consensus       218 ~--~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         218 R--VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             T--TCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             c--CCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            1  112234456788999999999999999999999975

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=344.87  Aligned_cols=238  Identities=21%  Similarity=0.334  Sum_probs=173.8

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccc--cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRR--SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||+||+|++++ .||||+++...  ....+.|.+|+++|++++|||||+++|++.+ +.++||||||++|+
T Consensus        12 ~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g~   89 (276)
T d1uwha_          12 VGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSS   89 (276)
T ss_dssp             CCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEEE
T ss_pred             EEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCCC
Confidence            35789999999999998865 59999875443  2356789999999999999999999998754 56899999999999


Q ss_pred             HHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.++|...+ ..++..+..+                 |+||||+|||++.+    +.+||+|||+|+.....  ......
T Consensus        90 L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~----~~~Kl~DFGla~~~~~~--~~~~~~  163 (276)
T d1uwha_          90 LYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED----LTVKIGDFGLATVKSRW--SGSHQF  163 (276)
T ss_dssp             HHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT----SSEEECCCCCSCC------------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCC----CCEEEccccceeecccc--CCcccc
Confidence            999997643 3554443333                 23567999999877    66999999999875321  122234


Q ss_pred             cccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          236 NKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      ....||+.|||||++.+   ..|+.++|||||||++|||+||+.||......           ......+..+      .
T Consensus       164 ~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~-----------~~~~~~~~~~------~  226 (276)
T d1uwha_         164 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-----------DQIIFMVGRG------Y  226 (276)
T ss_dssp             --CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----------HHHHHHHHHT------S
T ss_pred             cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH-----------HHHHHHHhcC------C
Confidence            56789999999999864   35899999999999999999999999643210           1111111100      0


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      ..+. ....+..+++.+.+||.+||+.||++|||+.||++.|+.+..
T Consensus       227 ~~p~-~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         227 LSPD-LSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CCCC-GGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCc-chhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            0111 112234566789999999999999999999999999987753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-48  Score=345.94  Aligned_cols=234  Identities=20%  Similarity=0.334  Sum_probs=180.1

Q ss_pred             ccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|+++ ++.||||++.. .....+.+.+|+++|++++|||||+++|++.+ +.++||||||++|+|.
T Consensus        18 ~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~   95 (272)
T d1qpca_          18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLV   95 (272)
T ss_dssp             EEEEEEETTEEEEEEEETTTEEEEEEEECT-TSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHH
T ss_pred             eEEEecCCCcEEEEEEECCCCEEEEEEEcc-CcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHH
Confidence            567999999999999997 56799998754 33457789999999999999999999998755 5679999999999999


Q ss_pred             HHhcCCC--CCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      +++....  .+++..+..+                 |+||||+|||++++    +.+||+|||+|+.+..   .......
T Consensus        96 ~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~----~~~Kl~DFGla~~~~~---~~~~~~~  168 (272)
T d1qpca_          96 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDT----LSCKIADFGLARLIED---NEYTARE  168 (272)
T ss_dssp             HHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----SCEEECCCTTCEECSS---SCEECCT
T ss_pred             HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecc----cceeeccccceEEccC---Ccccccc
Confidence            9887643  2444433332                 23567999999887    6699999999987642   2223344


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhccc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRR  316 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (381)
                      ...||+.|||||++.++.++.++|||||||++|||+||..|+.....          ..+.            ...+...
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~----------~~~~------------~~~i~~~  226 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT----------NPEV------------IQNLERG  226 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC----------HHHH------------HHHHHTT
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC----------HHHH------------HHHHHhc
Confidence            56799999999999988999999999999999999996555432111          0111            1111122


Q ss_pred             ccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          317 LKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       317 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      .....|..+++++.+|+.+||+.||++|||+.+|++.|++++..+
T Consensus       227 ~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ftst  271 (272)
T d1qpca_         227 YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (272)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhcC
Confidence            233345566788999999999999999999999999999988753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-47  Score=344.67  Aligned_cols=225  Identities=18%  Similarity=0.276  Sum_probs=170.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe----CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS----GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lv~e~  168 (381)
                      .+.||+|+||+||+|++.  +..||+|++.....  ...+.+.+|+++|++|+|||||++++++.+    ...+||||||
T Consensus        14 ~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~   93 (270)
T d1t4ha_          14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL   93 (270)
T ss_dssp             EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred             eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeC
Confidence            356999999999999986  67899998755432  245679999999999999999999999875    4568999999


Q ss_pred             cCCCCHHHHhcCCCCCCccchHH-------------------HHHHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          169 VSGANLADCLRNPRNPSFTVLST-------------------WLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~-------------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |++|+|.++|......++..+..                   +|+||||+|||+++.+   +.+||+|||+++....   
T Consensus        94 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~---~~~Kl~DFGla~~~~~---  167 (270)
T d1t4ha_          94 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT---GSVKIGDLGLATLKRA---  167 (270)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT---SCEEECCTTGGGGCCT---
T ss_pred             CCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCC---CCEEEeecCcceeccC---
Confidence            99999999998766666444332                   2346679999996532   5699999999986321   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                         ......+||+.|||||++.+ .|+.++|||||||++|||++|+.||.....           .......+..+    
T Consensus       168 ---~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-----------~~~~~~~i~~~----  228 (270)
T d1t4ha_         168 ---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----------AAQIYRRVTSG----  228 (270)
T ss_dssp             ---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----------HHHHHHHHTTT----
T ss_pred             ---CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc-----------HHHHHHHHHcC----
Confidence               23346789999999998865 699999999999999999999999963221           11111111110    


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .....++...++++.+||.+||+.||++|||+.|+++
T Consensus       229 ------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         229 ------VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             ------CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------CCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                  0011122234567999999999999999999999975

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-47  Score=345.13  Aligned_cols=239  Identities=17%  Similarity=0.260  Sum_probs=175.2

Q ss_pred             ccccccCCCceEEEEEECC------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIRG------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      .+.||+|+||.||+|.+++      ..||||++...... ...++.+|+++|++|+|||||+++|++.+.+.+++|||||
T Consensus        12 ~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~   91 (283)
T d1mqba_          12 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM   91 (283)
T ss_dssp             EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             eeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEec
Confidence            4568999999999999853      35888887543332 4567899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC-CCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNP-RNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~-~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      .+|+|.+++... ....+.++..+                 |+||||+|||++.+    +.+||+|||+++.+.... ..
T Consensus        92 ~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~----~~~Kl~DFGla~~~~~~~-~~  166 (283)
T d1mqba_          92 ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSN----LVCKVSDFGLSRVLEDDP-EA  166 (283)
T ss_dssp             TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----CCEEECCCCC-----------
T ss_pred             ccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCC----CeEEEcccchhhcccCCC-cc
Confidence            999999988654 34544443332                 23667999999887    679999999998754311 11


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........||+.|||||++.++.++.++|||||||++|||++|..|+.....          . ..           +..
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~----------~-~~-----------~~~  224 (283)
T d1mqba_         167 TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS----------N-HE-----------VMK  224 (283)
T ss_dssp             -------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----------H-HH-----------HHH
T ss_pred             ceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC----------H-HH-----------HHH
Confidence            1223445789999999999999999999999999999999997666532111          0 01           111


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      .+....+...+..++..+.+||.+||+.||++||||.||++.|+++.....
T Consensus       225 ~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~  275 (283)
T d1mqba_         225 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  275 (283)
T ss_dssp             HHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             HHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCcc
Confidence            122233344555677889999999999999999999999999999876443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-48  Score=350.58  Aligned_cols=227  Identities=17%  Similarity=0.227  Sum_probs=177.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||||++....   ....+.+.+|+++|++|+|||||++++++.+.+.+|||||||+
T Consensus        12 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~   91 (288)
T d1uu3a_          12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK   91 (288)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccC
Confidence            4677999999999999985  7899999875432   3356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++...+..++..+..++                 +||||+|||++++    +.+||+|||+|+.+..  .....
T Consensus        92 gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~----~~vkl~DFG~a~~~~~--~~~~~  165 (288)
T d1uu3a_          92 NGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNED----MHIQITDFGTAKVLSP--ESKQA  165 (288)
T ss_dssp             TEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----SCEEECCCTTCEECC--------
T ss_pred             CCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCC----ceEEecccccceeccc--CCccc
Confidence            99999999887777765554433                 3567999999887    5699999999987632  12223


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.....           ........           
T Consensus       166 ~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----------~~~~~~i~-----------  223 (288)
T d1uu3a_         166 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----------YLIFQKII-----------  223 (288)
T ss_dssp             ----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHH-----------
T ss_pred             ccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH-----------HHHHHHHH-----------
Confidence            34567899999999999999999999999999999999999999963211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..  ...+|..+++++.+||.+||+.||.+|||++|+++
T Consensus       224 ~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         224 KL--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             TT--CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             cC--CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            11  12234456788999999999999999999999865

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=351.93  Aligned_cols=233  Identities=23%  Similarity=0.340  Sum_probs=177.8

Q ss_pred             cccccccCCCceEEEEEECC-------ceEEEEEeccccc-ccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRS-LDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~  166 (381)
                      ..+.||+|+||+||+|++.+       ..||+|+...... .....+.+|+.+|+++ +|||||++++++.+.+.++|||
T Consensus        41 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~  120 (325)
T d1rjba_          41 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF  120 (325)
T ss_dssp             EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEE
Confidence            35789999999999999853       2577877644332 2456789999999998 8999999999999999999999


Q ss_pred             eccCCCCHHHHhcCCCC-----------------------CCccchH-------H----------HHHHhhhcceeeccc
Q 016850          167 EHVSGANLADCLRNPRN-----------------------PSFTVLS-------T----------WLSRMQSSSIIVSEE  206 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~-----------------------~~~~~~~-------~----------~~~~l~~~Nill~~~  206 (381)
                      |||++|+|.++|+....                       +.+..++       .          +|+||||+|||++.+
T Consensus       121 Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~  200 (325)
T d1rjba_         121 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG  200 (325)
T ss_dssp             ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT
T ss_pred             EcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC
Confidence            99999999999986532                       2222222       2          234677888888776


Q ss_pred             CCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCC
Q 016850          207 NAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEG  285 (381)
Q Consensus       207 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~  285 (381)
                          +.+||+|||+|+.....  ..........||+.|||||++.++.|+.++|||||||++|||+| |++||...... 
T Consensus       201 ----~~~Kl~DFGla~~~~~~--~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-  273 (325)
T d1rjba_         201 ----KVVKICDFGLARDIMSD--SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-  273 (325)
T ss_dssp             ----TEEEECCCGGGSCGGGC--TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred             ----CeEEEeeccccccccCC--CceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHH-
Confidence                67999999999875431  22223345678999999999999999999999999999999998 89999643221 


Q ss_pred             cccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          286 IDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                                           ..+.+++....+...|..+++++.+||.+||+.||++|||++||++.|..
T Consensus       274 ---------------------~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         274 ---------------------ANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             ---------------------HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ---------------------HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence                                 01112223333444566678899999999999999999999999999863

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-48  Score=354.09  Aligned_cols=247  Identities=17%  Similarity=0.220  Sum_probs=176.4

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||+||+|++.  ++.||+|+++..... ..+++.+|+.+|++|+|||||+++++|.+.+++|||||||++|
T Consensus        10 ~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg   89 (322)
T d1s9ja_          10 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG   89 (322)
T ss_dssp             EEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            4578999999999999985  788999987654333 4678999999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchH------------------HHHHHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          173 NLADCLRNPRNPSFTVLS------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      +|.+++.+.+...+..+.                  .+|+||||+|||++++    +.+||+|||+|+.+..      ..
T Consensus        90 ~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~----~~vkl~DFGla~~~~~------~~  159 (322)
T d1s9ja_          90 SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR----GEIKLCDFGVSGQLID------SM  159 (322)
T ss_dssp             EHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTT----CCEEECCCCCCHHHHH------HT
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCC----CCEEEeeCCCccccCC------Cc
Confidence            999999876666544332                  2234678999999887    5699999999987532      22


Q ss_pred             ccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHH--------------H
Q 016850          235 VNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKAS--------------E  300 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--------------~  300 (381)
                      ....+||+.|||||++.+..|+.++|||||||++|||++|+.||.....................              .
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSS  239 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------
T ss_pred             cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccc
Confidence            34578999999999999999999999999999999999999999753221100000000000000              0


Q ss_pred             HH--cCCccchhhhh---cccccCCCC-HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 AV--AGGVGGVRKWV---DRRLKDSYP-VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 ~~--~~~~~~~~~~~---~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..  ........+..   .....+..+ ...+.++.+|+.+||+.||.+|||++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         240 YGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             ------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            00  00000000000   000011111 224678999999999999999999999977

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-46  Score=344.24  Aligned_cols=231  Identities=18%  Similarity=0.207  Sum_probs=164.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||+||+|++.  ++.||||++...... ..+.+.+|+++|++|+|||||++++++.+++.+|||||||++|
T Consensus        13 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg   92 (307)
T d1a06a_          13 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG   92 (307)
T ss_dssp             EEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             EEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            3567999999999999985  788999987654332 3467889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      +|.++|.....+++..+..++                 +||||+||++...+ .++.+||+|||+++....     ....
T Consensus        93 ~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~-~~~~vkl~DFG~a~~~~~-----~~~~  166 (307)
T d1a06a_          93 ELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD-EDSKIMISDFGLSKMEDP-----GSVL  166 (307)
T ss_dssp             BHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-TTCCEEECCC-----------------
T ss_pred             cHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccC-CCceEEEeccceeEEccC-----CCee
Confidence            999999987777766554443                 35669999986421 126699999999986532     2233


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+||+.|||||++.+..|+.++|||||||++|||++|++||.....           .+.......+         ..
T Consensus       167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----------~~~~~~i~~~---------~~  226 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND-----------AKLFEQILKA---------EY  226 (307)
T ss_dssp             ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHTT---------CC
T ss_pred             eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH-----------HHHHHHHhcc---------CC
Confidence            457899999999999999999999999999999999999999963211           1111111111         11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..+++++.+||.+||+.||++|||+.|+++
T Consensus       227 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         227 EFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            1112233456788999999999999999999999976

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-47  Score=344.94  Aligned_cols=227  Identities=14%  Similarity=0.186  Sum_probs=177.3

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+.||+|+||+||+|++.  +..||||++........+.+.+|+++|++|+|||||++++++.+.+.+|||||||++|+|
T Consensus        17 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L   96 (288)
T d2jfla1          17 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV   96 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred             eEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcH
Confidence            567999999999999985  778999998766556678899999999999999999999999999999999999999999


Q ss_pred             HHHhcC-CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRN-PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~-~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.+ .+.+++.++..++                 +||||+|||++.+    +.+||+|||+|+....    ......
T Consensus        97 ~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~----~~~Kl~DFG~a~~~~~----~~~~~~  168 (288)
T d2jfla1          97 DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLD----GDIKLADFGVSAKNTR----TIQRRD  168 (288)
T ss_dssp             HHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECHH----HHHHHT
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCC----CCEEEEechhhhccCC----Cccccc
Confidence            999765 3445655544433                 3567999999876    5699999999976422    112334


Q ss_pred             ccCCCccccchhhhc-----CCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          237 KIEGTRGYMAPEFQA-----SGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~-----~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ..+||+.|||||++.     +..|+.++|||||||++|||++|+.||......        ..   ......+.      
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~--------~~---~~~i~~~~------  231 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPM--------RV---LLKIAKSE------  231 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGG--------GH---HHHHHHSC------
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHH--------HH---HHHHHcCC------
Confidence            678999999999884     456899999999999999999999999643211        11   11111110      


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                          ......+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       232 ----~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         232 ----PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             ----CCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----CCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                0111234456789999999999999999999999975

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.3e-46  Score=349.51  Aligned_cols=230  Identities=20%  Similarity=0.226  Sum_probs=180.5

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||.||+|++.  |+.||||++........+.+.+|+++|++|+|||||++++++.+++.+|||||||++|+
T Consensus        30 i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~  109 (350)
T d1koaa2          30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE  109 (350)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCC
Confidence            4678999999999999985  88999999876665567889999999999999999999999999999999999999999


Q ss_pred             HHHHhcCC-CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNP-RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~-~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.++|... ..+++..+..++                 +||||+|||+..+..  +.+||+|||+++.+..     ....
T Consensus       110 L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~--~~vkL~DFG~a~~~~~-----~~~~  182 (350)
T d1koaa2         110 LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS--NELKLIDFGLTAHLDP-----KQSV  182 (350)
T ss_dssp             HHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTS--CCEEECCCTTCEECCT-----TSCE
T ss_pred             HHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCC--CeEEEeecchheeccc-----cccc
Confidence            99999654 345655544443                 356799999965432  6799999999987532     2334


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|||||++.+..|+.++|||||||++|||++|+.||.....           .+........         ..
T Consensus       183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----------~~~~~~i~~~---------~~  242 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----------DETLRNVKSC---------DW  242 (350)
T ss_dssp             EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHHT---------CC
T ss_pred             ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhC---------CC
Confidence            567899999999999999999999999999999999999999963211           1111111111         00


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .........+++.+++||.+||+.||++|||++|+++
T Consensus       243 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         243 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             CSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111122346778999999999999999999999976

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-46  Score=333.39  Aligned_cols=230  Identities=20%  Similarity=0.282  Sum_probs=180.2

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ..+.||+|+||+||+|+++ ++.||||+++.. ....+++.+|++++++++|||||+++|+|.+++.+++||||+++|+|
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l   86 (258)
T d1k2pa_           8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL   86 (258)
T ss_dssp             CCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEH
T ss_pred             EeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcH
Confidence            3678999999999999997 558999987543 33567899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          175 ADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       175 ~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      .+++.... ...+..+..++                 ++|+|+||+++++    +.+||+|||+++.+..   .......
T Consensus        87 ~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~----~~~kl~DfG~a~~~~~---~~~~~~~  159 (258)
T d1k2pa_          87 LNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ----GVVKVSDFGLSRYVLD---DEYTSSV  159 (258)
T ss_dssp             HHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTT----CCEEECCCSSCCBCSS---SSCCCCC
T ss_pred             HHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCC----CcEEECcchhheeccC---CCceeec
Confidence            99977643 33333333332                 2456999999886    5699999999987543   2222334


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...||+.|+|||++.+..++.++|||||||++|||+| |+.||......        .+..    .           +..
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--------~~~~----~-----------i~~  216 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--------ETAE----H-----------IAQ  216 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--------HHHH----H-----------HHT
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH--------HHHH----H-----------HHh
Confidence            5679999999999999999999999999999999998 79998643211        1111    1           111


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSK  356 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~  356 (381)
                      ..+...|..+++.+.+||.+||+.||.+|||+.+|++.|.+
T Consensus       217 ~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         217 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             CCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            22333455567889999999999999999999999998864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-46  Score=340.10  Aligned_cols=232  Identities=19%  Similarity=0.228  Sum_probs=180.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc------ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS------LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||+||+|++.  |+.||||++.....      ...+.+.+|+++|++|+|||||++++++.+.+.+|||||
T Consensus        14 ~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E   93 (293)
T d1jksa_          14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE   93 (293)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            4578999999999999985  78999998754321      246889999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ||++|+|.++|......++..+..++.                 ||||+|||++.++.....+||+|||+++.+..    
T Consensus        94 ~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~----  169 (293)
T d1jksa_          94 LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----  169 (293)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTT----
T ss_pred             cCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCC----
Confidence            999999999998877776665554433                 46699999988765556799999999987532    


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                       ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....           .+......... .   
T Consensus       170 -~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----------~~~~~~i~~~~-~---  233 (293)
T d1jksa_         170 -GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----------QETLANVSAVN-Y---  233 (293)
T ss_dssp             -SCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHTTC-C---
T ss_pred             -CccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH-----------HHHHHHHHhcC-C---
Confidence             2234456799999999999998999999999999999999999999964221           11111111110 0   


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ......+..+++.+.+||.+||+.||.+|||++|+++
T Consensus       234 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         234 -----EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             -----CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----CCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 0000111235678999999999999999999999865

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-46  Score=343.01  Aligned_cols=222  Identities=17%  Similarity=0.203  Sum_probs=174.4

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      .+.||+|+||+||+|++.  ++.||||++......   ..+.+.+|+++|++|+|||||++++++.+.+.+|||||||++
T Consensus        20 l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~   99 (309)
T d1u5ra_          20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG   99 (309)
T ss_dssp             EEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred             eEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCC
Confidence            577999999999999985  778999987654332   346789999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      |+|..++......++..+..++                 +||||+|||++.+    +.+||+|||+|+....        
T Consensus       100 g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~----~~~Kl~DFG~a~~~~~--------  167 (309)
T d1u5ra_         100 SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP----GLVKLGDFGSASIMAP--------  167 (309)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT----TEEEECCCTTCBSSSS--------
T ss_pred             CchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCC----CCEEEeecccccccCC--------
Confidence            9998887776667766554443                 3567999999876    6699999999976422        


Q ss_pred             ccccCCCccccchhhhcC---CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          235 VNKIEGTRGYMAPEFQAS---GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~---~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ....+||+.|||||++.+   +.|+.++|||||||++|||++|+.||.....           .+......         
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~-----------~~~~~~i~---------  227 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----------MSALYHIA---------  227 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----------HHHHHHHH---------
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH-----------HHHHHHHH---------
Confidence            234679999999999864   4689999999999999999999999963211           11111111         


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                        ........+..+++.+.+||.+||+.||.+|||+.|+++
T Consensus       228 --~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         228 --QNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             --HSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --hCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence              111111223345778999999999999999999999975

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=334.80  Aligned_cols=227  Identities=22%  Similarity=0.271  Sum_probs=172.4

Q ss_pred             ccccccCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCeeeEEEeccCCCCHH
Q 016850           97 AKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEHVSGANLA  175 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e~~~~gsL~  175 (381)
                      .+.||+|+||.||+|+++|+.||||+++  .....+.+.+|+++|++++|||||+++|++.+ .+.+++||||+++|+|.
T Consensus        12 ~~~lG~G~fg~Vy~~~~~~~~vAvK~i~--~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~   89 (262)
T d1byga_          12 LQTIGKGEFGDVMLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV   89 (262)
T ss_dssp             EEEEEECSSCEEEEEEETTEEEEEEECC--CCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHH
T ss_pred             eEEEecCCCeEEEEEEECCeEEEEEEEC--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHH
Confidence            5679999999999999999999999864  34456889999999999999999999999865 46689999999999999


Q ss_pred             HHhcCCC--CCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcccccc
Q 016850          176 DCLRNPR--NPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKVN  236 (381)
Q Consensus       176 ~~l~~~~--~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  236 (381)
                      ++|....  ..+...++.++.                 +|+|.|||++.+    +.+||+|||+++....       ...
T Consensus        90 ~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~----~~~kl~dfg~s~~~~~-------~~~  158 (262)
T d1byga_          90 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED----NVAKVSDFGLTKEASS-------TQD  158 (262)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----SCEEECCCCC----------------
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCC----CCEeecccccceecCC-------CCc
Confidence            9997643  234443333332                 456999999887    6699999999986422       223


Q ss_pred             ccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          237 KIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       237 ~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ...+|+.|+|||++.++.++.++|||||||++|||+| |++||.....                       ..+...+..
T Consensus       159 ~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~-----------------------~~~~~~i~~  215 (262)
T d1byga_         159 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----------------------KDVVPRVEK  215 (262)
T ss_dssp             ---CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----------------------GGHHHHHTT
T ss_pred             cccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH-----------------------HHHHHHHHc
Confidence            4568999999999999999999999999999999998 6877753221                       111222223


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                      ..++..+..+++.+.+||.+||+.||++|||+.+|++.|+++-.
T Consensus       216 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         216 GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            33445566677899999999999999999999999999998743

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.7e-47  Score=345.39  Aligned_cols=237  Identities=19%  Similarity=0.227  Sum_probs=179.8

Q ss_pred             cCC-cccccccCCCceEEEEEECC-------ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeee
Q 016850           93 NNF-LAKKFTSSSASASWRGTIRG-------KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        93 ~~f-~~~~lg~G~~g~V~~~~~~~-------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~  163 (381)
                      ++| ..+.||+|+||+||+|++.+       +.||||++...... ..+++.+|+++|++++|||||+++++|.+.+..+
T Consensus        13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~   92 (301)
T d1lufa_          13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC   92 (301)
T ss_dssp             GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred             HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence            344 45789999999999999753       67999987544333 3567999999999999999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCCC------------------------CCccchHHH-----------------HHHhhhccee
Q 016850          164 LVYEHVSGANLADCLRNPRN------------------------PSFTVLSTW-----------------LSRMQSSSII  202 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~------------------------~~~~~~~~~-----------------~~~l~~~Nil  202 (381)
                      +||||+++|+|.++|+....                        +....+..+                 |+||||+|||
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NIL  172 (301)
T d1lufa_          93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL  172 (301)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceE
Confidence            99999999999999964321                        222222222                 3467799999


Q ss_pred             ecccCCCccceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCC-cccccc
Q 016850          203 VSEENAGSLCAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE-EVLKFV  281 (381)
Q Consensus       203 l~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~-~pf~~~  281 (381)
                      ++.+    +.+||+|||+++.....  ..........||+.|+|||++.+..|+.++|||||||++|||++|. +||...
T Consensus       173 ld~~----~~~Kl~DFGls~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~  246 (301)
T d1lufa_         173 VGEN----MVVKIADFGLSRNIYSA--DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  246 (301)
T ss_dssp             ECGG----GCEEECCCSCHHHHTGG--GCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             ECCC----CcEEEccchhheeccCC--ccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC
Confidence            9986    67999999999865321  2222344577999999999999999999999999999999999985 566532


Q ss_pred             ccCCcccccchhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHH
Q 016850          282 FDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMY  358 (381)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~  358 (381)
                      ..           .+....            +........+..+++++.+|+.+||+.||++||||.||++.|+++.
T Consensus       247 ~~-----------~e~~~~------------v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         247 AH-----------EEVIYY------------VRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             CH-----------HHHHHH------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CH-----------HHHHHH------------HHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            11           111111            1111123345566778999999999999999999999999999863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-46  Score=341.75  Aligned_cols=238  Identities=16%  Similarity=0.226  Sum_probs=179.7

Q ss_pred             ccccccCCCceEEEEEECC---c--eEEEEEeccc-ccccHHHHHHHHHHHhhcCCCCcceEEEEEEe-CCeeeEEEecc
Q 016850           97 AKKFTSSSASASWRGTIRG---K--DVIIFQRKLR-RSLDLEQLRERLSVICRSHHSSLIKLLGACVS-GNCGYLVYEHV  169 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~---~--~v~vk~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lv~e~~  169 (381)
                      .+.||+|+||+||+|++..   +  .||||++... .....+++.+|+++|++|+|||||+++|++.+ ++.+++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            3568999999999999842   2  4778876532 23356789999999999999999999999876 56899999999


Q ss_pred             CCCCHHHHhcCCCCC-CccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPRNP-SFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~-~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++...... ....+..+                 |+||||+|||++++    +.+||+|||+++.........
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~----~~~kL~DFG~~~~~~~~~~~~  187 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDS  187 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----CCEEECSSGGGCCTTTTTCCC
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCC----CCEEEecccchhhcccccccc
Confidence            999999999875533 22222222                 23677999999876    669999999998765433333


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........||+.|+|||.+.++.++.++|||||||++|||++|..||......          .+..            .
T Consensus       188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~----------~~~~------------~  245 (311)
T d1r0pa_         188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----------FDIT------------V  245 (311)
T ss_dssp             TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------------CH------------H
T ss_pred             ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH----------HHHH------------H
Confidence            33344567999999999999999999999999999999999988887532211          1111            1


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      .+........|..+++.+.+||.+||+.||++||++.||++.|+.++..
T Consensus       246 ~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         246 YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            1111122334455677899999999999999999999999999999754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-46  Score=341.08  Aligned_cols=240  Identities=25%  Similarity=0.316  Sum_probs=178.5

Q ss_pred             cccccccCCCceEEEEEEC--Cc--eEEEEEeccc-ccccHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GK--DVIIFQRKLR-RSLDLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~--~v~vk~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+||+|+++  +.  .||||++... .....+.+.+|+++|+++ +|||||+++|+|.+.+.+++|||||
T Consensus        14 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~   93 (309)
T d1fvra_          14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   93 (309)
T ss_dssp             EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEec
Confidence            3577999999999999985  33  3556654332 223566799999999999 7999999999999999999999999


Q ss_pred             CCCCHHHHhcCC----------------CCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEc
Q 016850          170 SGANLADCLRNP----------------RNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKIC  216 (381)
Q Consensus       170 ~~gsL~~~l~~~----------------~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~  216 (381)
                      ++|+|.++|+..                ..+++.++..++                 ++|+|+|||++.+    +.+||+
T Consensus        94 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~----~~~kl~  169 (309)
T d1fvra_          94 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN----YVAKIA  169 (309)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGG----GCEEEC
T ss_pred             CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCC----CceEEc
Confidence            999999999765                233333332222                 3556889888887    569999


Q ss_pred             ccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCC-ccccccccCCcccccchhHH
Q 016850          217 HFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE-EVLKFVFDEGIDGYRRVSVV  295 (381)
Q Consensus       217 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~  295 (381)
                      |||+++....     ........||+.|+|||.+.++.++.++|||||||++|||++|. +||.....           .
T Consensus       170 DfG~a~~~~~-----~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~-----------~  233 (309)
T d1fvra_         170 DFGLSRGQEV-----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----------A  233 (309)
T ss_dssp             CTTCEESSCE-----ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------H
T ss_pred             cccccccccc-----cccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCH-----------H
Confidence            9999986532     12223456999999999999999999999999999999999976 46643211           1


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhh
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~  367 (381)
                      +            +...+....+...+..+++++.+||.+||+.||++||||.||++.|++++.+.+.+...
T Consensus       234 ~------------~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~~~~~~  293 (309)
T d1fvra_         234 E------------LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT  293 (309)
T ss_dssp             H------------HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBCC
T ss_pred             H------------HHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCcCCCCC
Confidence            1            11112222334455567789999999999999999999999999999998876654433

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=8.5e-46  Score=344.19  Aligned_cols=230  Identities=20%  Similarity=0.224  Sum_probs=181.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||+||+|++.  |+.||||++........+.+.+|+++|++|+|||||+++++|.+++.+|||||||++|+
T Consensus        33 i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~  112 (352)
T d1koba_          33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE  112 (352)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCh
Confidence            4578999999999999985  88999998766555566788999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.+++.... .+++..+..++                 +||||+|||++..+.  +.+||+|||+|+.+..     ....
T Consensus       113 L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~--~~vkL~DFGla~~~~~-----~~~~  185 (352)
T d1koba_         113 LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA--SSVKIIDFGLATKLNP-----DEIV  185 (352)
T ss_dssp             HHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTC--CCEEECCCTTCEECCT-----TSCE
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCC--CeEEEeecccceecCC-----CCce
Confidence            999887654 45655544433                 356799999974332  6799999999987532     2334


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.+..|+.++|||||||++|||++|+.||.....           .+........         ..
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----------~~~~~~i~~~---------~~  245 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-----------LETLQNVKRC---------DW  245 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----------HHHHHHHHHC---------CC
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHhC---------CC
Confidence            567899999999999999999999999999999999999999964221           1111111111         11


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ......+..+++++.+||.+||+.||.+|||+.|+++
T Consensus       246 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         246 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1122233456788999999999999999999999975

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-46  Score=343.68  Aligned_cols=237  Identities=17%  Similarity=0.194  Sum_probs=186.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||+|++...   .....+++.+|+.+|++++|||||++++++.+.+.+|+|||||+
T Consensus         9 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~   88 (337)
T d1o6la_           9 YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN   88 (337)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccC
Confidence            4578999999999999985  889999987543   23356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++...+..++..+..++.                 ||||+|||++.+    +.+||+|||+|+....    ...
T Consensus        89 gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~----g~vkl~DFG~a~~~~~----~~~  160 (337)
T d1o6la_          89 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD----GHIKITDFGLCKEGIS----DGA  160 (337)
T ss_dssp             TCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCSCC----TTC
T ss_pred             CCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCC----CCEEEeeccccccccc----CCc
Confidence            999999999877777655544433                 567999999887    5699999999986432    223


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|+|||++.+..|+.++|||||||++|||++|++||......        .+..   ...           
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~--------~~~~---~i~-----------  218 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFE---LIL-----------  218 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH---HHH-----------
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH--------HHHH---HHh-----------
Confidence            345678999999999999999999999999999999999999999643210        1111   111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~~~  367 (381)
                      ..  ...+|..+++++++||.+||++||.+||+     +.|+   +++-+....+|..+
T Consensus       219 ~~--~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~ei---l~Hp~f~~i~~~~l  272 (337)
T d1o6la_         219 ME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV---MEHRFFLSINWQDV  272 (337)
T ss_dssp             HC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHH---HTSGGGTTCCHHHH
T ss_pred             cC--CCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHH---HcCcccccCCHHHH
Confidence            11  12345567889999999999999999996     5555   44444455566554

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-45  Score=332.85  Aligned_cols=236  Identities=21%  Similarity=0.284  Sum_probs=169.7

Q ss_pred             cccccccCCCceEEEEEECC-----ceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRG-----KDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~-----~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|++..     ..||||++...... ..+.+.+|+++|++++|||||+++|++. .+.+++|||||
T Consensus        11 l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~   89 (273)
T d1mp8a_          11 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC   89 (273)
T ss_dssp             EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             EEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEec
Confidence            35779999999999999852     34666665433222 4577999999999999999999999986 46789999999


Q ss_pred             CCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          170 SGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       170 ~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ++|+|.+++.... ..++..+..++                 +||||+||+++.+    +.+||+|||+++.+..   ..
T Consensus        90 ~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~----~~~Kl~DfG~a~~~~~---~~  162 (273)
T d1mp8a_          90 TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN----DCVKLGDFGLSRYMED---ST  162 (273)
T ss_dssp             TTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET----TEEEECC--------------
T ss_pred             cCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCC----CcEEEccchhheeccC---Cc
Confidence            9999999876543 44544443332                 3566999999887    5699999999987532   22


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                      ........||+.|+|||++.+..++.++|||||||++|||++ |.+||......        .+..              
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--------~~~~--------------  220 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--------DVIG--------------  220 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--------GHHH--------------
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--------HHHH--------------
Confidence            223345678999999999999999999999999999999998 89998643221        1111              


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                       .+........+..+++.+.+||.+||+.||++|||+.||++.|+.++.+.+
T Consensus       221 -~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k  271 (273)
T d1mp8a_         221 -RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  271 (273)
T ss_dssp             -HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             -HHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence             111122234455677899999999999999999999999999999987754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-45  Score=330.27  Aligned_cols=234  Identities=24%  Similarity=0.341  Sum_probs=174.7

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      ..+.||+|+||.||+|+++ ++.||||++.. .....+.|.+|+.+|++++|||||+++|++.+ +.+++|||||++|+|
T Consensus        21 i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l   98 (285)
T d1fmka3          21 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL   98 (285)
T ss_dssp             EEEEEEECSSCEEEEEEETTTEEEEEEECCT-TSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred             EeeEEeeCCCeEEEEEEECCCCEEEEEEECc-ccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecCCCch
Confidence            4678999999999999997 45788988643 33456889999999999999999999999855 567899999999999


Q ss_pred             HHHhcCC--CCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          175 ADCLRNP--RNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       175 ~~~l~~~--~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      ..++...  ..+.+.+++.++.                 +|+|+|||++++    +.+||+|||+++.+..   ......
T Consensus        99 ~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~----~~~kl~DfGla~~~~~---~~~~~~  171 (285)
T d1fmka3          99 LDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIED---NEYTAR  171 (285)
T ss_dssp             HHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG----GCEEECCCCTTC-------------
T ss_pred             hhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCC----CcEEEcccchhhhccC---CCceee
Confidence            9998753  3455544443332                 566999999886    6799999999987532   222334


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||++.++.++.++|||||||++|||++|..|+.....          ..+            +...+..
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~----------~~~------------~~~~i~~  229 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV----------NRE------------VLDQVER  229 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC----------HHH------------HHHHHHT
T ss_pred             ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC----------HHH------------HHHHHHh
Confidence            456799999999999999999999999999999999997666542111          111            1111222


Q ss_pred             cccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          316 RLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       316 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                      ......+..+++++.+||.+||+.||++||++.+|+++|++++..
T Consensus       230 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         230 GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             cCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            223345556778999999999999999999999999999887654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-44  Score=331.98  Aligned_cols=234  Identities=17%  Similarity=0.264  Sum_probs=183.8

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  |+.||||++...   .....+.+.+|+.+|++++|||||++++++.+.+.+|+|||||+
T Consensus         8 i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~   87 (316)
T d1fota_           8 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIE   87 (316)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecC
Confidence            4678999999999999985  789999987543   22356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ||+|..++..........+..+.                 +||||+|||++.+    +.+||+|||+|+....       
T Consensus        88 gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~----g~vkL~DFG~a~~~~~-------  156 (316)
T d1fota_          88 GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKN----GHIKITDFGFAKYVPD-------  156 (316)
T ss_dssp             SCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTT----SCEEECCCSSCEECSS-------
T ss_pred             CccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCC----CCEEEecCccceEecc-------
Confidence            99999999887776655444333                 3567999999876    5699999999987532       


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      .....+||+.|||||++.+..|+.++|||||||++|||++|+.||.....           .+......           
T Consensus       157 ~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----------~~~~~~i~-----------  214 (316)
T d1fota_         157 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----------MKTYEKIL-----------  214 (316)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHH-----------
T ss_pred             ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH-----------HHHHHHHH-----------
Confidence            23457899999999999999999999999999999999999999964211           11111111           


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                      ..  ...+|..+++++.+++.+||+.||.+|+     |++++++   +-+.+..+|..+
T Consensus       215 ~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~---Hp~f~~i~~~~l  268 (316)
T d1fota_         215 NA--ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN---HPWFKEVVWEKL  268 (316)
T ss_dssp             HC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT---SGGGSSCCHHHH
T ss_pred             cC--CCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc---CcccccCCHHHH
Confidence            11  1223445678899999999999999996     7888754   444455566544

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-45  Score=333.62  Aligned_cols=238  Identities=24%  Similarity=0.317  Sum_probs=183.9

Q ss_pred             ccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeEEEe
Q 016850           97 AKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      .+.||+|+||.||+|++.       ++.||||+++..... ....+.+|+.+++++ +|||||+++|++.+.+.+++|||
T Consensus        28 ~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE  107 (311)
T d1t46a_          28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE  107 (311)
T ss_dssp             EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             eeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEE
Confidence            567999999999999873       357999987654332 456789999999999 79999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC------------------CCCccchHHH-----------------HHHhhhcceeecccCCCccc
Q 016850          168 HVSGANLADCLRNPR------------------NPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~------------------~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~  212 (381)
                      ||++|+|.++|+...                  ...+..+..+                 |+||||+||+++..    ..
T Consensus       108 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~----~~  183 (311)
T d1t46a_         108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG----RI  183 (311)
T ss_dssp             CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT----TE
T ss_pred             cCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccccc----Cc
Confidence            999999999997543                  1222222222                 23566888888776    56


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRR  291 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~  291 (381)
                      +||+|||+++.+...  ..........||+.|+|||++.++.++.++|||||||++|||+| |.+||......       
T Consensus       184 ~ki~DfG~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~-------  254 (311)
T d1t46a_         184 TKICDFGLARDIKND--SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-------  254 (311)
T ss_dssp             EEECCCGGGSCTTSC--TTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-------
T ss_pred             ccccccchheeccCC--CcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH-------
Confidence            999999999876431  22233455789999999999999999999999999999999999 55555432110       


Q ss_pred             hhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          292 VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                                     +.+.+++....+...+..+++.+.+||.+||+.||++||||.+|+++|++++.++.
T Consensus       255 ---------------~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~~~  310 (311)
T d1t46a_         255 ---------------SKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (311)
T ss_dssp             ---------------HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             ---------------HHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhccCC
Confidence                           11222333344445555677899999999999999999999999999999988754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-45  Score=332.88  Aligned_cols=248  Identities=19%  Similarity=0.230  Sum_probs=176.3

Q ss_pred             cccccccCCCceEEEEEECCceEEEEEecccccccHHHHHH--HHHHHhhcCCCCcceEEEEEEeCC----eeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRE--RLSVICRSHHSSLIKLLGACVSGN----CGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~--E~~il~~l~h~nIv~l~~~~~~~~----~~~lv~e~~  169 (381)
                      ..+.||+|+||.||+|+++|+.||||++....   ...+.+  |+..+.+++|||||++++++.+.+    .+|+|||||
T Consensus         7 l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~   83 (303)
T d1vjya_           7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH   83 (303)
T ss_dssp             EEEEEECCSSSEEEEEEETTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred             EEEEEeeCCCeEEEEEEECCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecc
Confidence            45679999999999999999999999875432   234444  555556789999999999998643    689999999


Q ss_pred             CCCCHHHHhcCCCCCCccchH-------------------------HHHHHhhhcceeecccCCCccceEEccccccccc
Q 016850          170 SGANLADCLRNPRNPSFTVLS-------------------------TWLSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~-------------------------~~~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      ++|+|.++|++.. ..+.+..                         .+|+||||+|||++++    +.+||+|||+++.+
T Consensus        84 ~~g~L~~~l~~~~-l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~----~~~Kl~DFGl~~~~  158 (303)
T d1vjya_          84 EHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN----GTCCIADLGLAVRH  158 (303)
T ss_dssp             TTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTT----SCEEECCCTTCEEE
T ss_pred             cCCCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCC----CCeEEEecCccccc
Confidence            9999999998653 3322211                         1345678999999887    67999999999886


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCC------CCCcchhHHHHHHHHHHHHhCCccccccccCCccccc---chhHH
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASG------VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYR---RVSVV  295 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~---~~~~~  295 (381)
                      ...............||+.|+|||++.+.      .++.++|||||||++|||+||..||............   .....
T Consensus       159 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~  238 (303)
T d1vjya_         159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV  238 (303)
T ss_dssp             ETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             cCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchH
Confidence            54333333344567899999999998754      3678999999999999999999888643322211100   00111


Q ss_pred             HHHHHHHcCCccchhhhhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          296 DKASEAVAGGVGGVRKWVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      .......          .....++..     +......+.+|+.+||+.||++|||+.||++.|+++..+.
T Consensus       239 ~~~~~~~----------~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         239 EEMRKVV----------CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             HHHHHHH----------TTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHH----------hccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence            1111111          111122221     2245677999999999999999999999999999987654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-45  Score=331.35  Aligned_cols=237  Identities=22%  Similarity=0.296  Sum_probs=170.8

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEe-CCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVS-GNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~-~~~~~lv  165 (381)
                      ..+.||+|+||.||+|++.       ++.||||++...... ..+.+.+|+.++.++ +|+|||.+++++.. ++.+++|
T Consensus        17 ~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv   96 (299)
T d1ywna1          17 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI   96 (299)
T ss_dssp             EEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred             EeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEE
Confidence            3578999999999999974       257899986543322 456788888888887 78999999999875 4568999


Q ss_pred             EeccCCCCHHHHhcCCCC----------------CCccchHH-----------------HHHHhhhcceeecccCCCccc
Q 016850          166 YEHVSGANLADCLRNPRN----------------PSFTVLST-----------------WLSRMQSSSIIVSEENAGSLC  212 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~----------------~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~  212 (381)
                      ||||++|+|.++|+....                +++..+..                 +|+||||+|||++++    +.
T Consensus        97 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~----~~  172 (299)
T d1ywna1          97 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NV  172 (299)
T ss_dssp             EECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGG----GC
T ss_pred             EEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCC----Cc
Confidence            999999999999975321                22222222                 234677999999877    67


Q ss_pred             eEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCC-ccccccccCCcccccc
Q 016850          213 AKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE-EVLKFVFDEGIDGYRR  291 (381)
Q Consensus       213 ~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~-~pf~~~~~~~~~~~~~  291 (381)
                      +||+|||+|+....  ...........||+.|||||++.++.++.++|||||||++|||++|. +||......       
T Consensus       173 ~Kl~DFGla~~~~~--~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-------  243 (299)
T d1ywna1         173 VKICDFGLARDIYK--DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-------  243 (299)
T ss_dssp             EEECC------CCS--CTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-------
T ss_pred             EEEccCcchhhccc--cccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-------
Confidence            99999999987532  12222344578999999999999999999999999999999999974 577532211       


Q ss_pred             hhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHH
Q 016850          292 VSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLE  360 (381)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~  360 (381)
                          ..           +...+........+..+++++.+||.+||+.||++|||+.||++.|++++..
T Consensus       244 ----~~-----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         244 ----EE-----------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             ----HH-----------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HH-----------HHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence                01           1111222233444556778899999999999999999999999999998653

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-44  Score=330.91  Aligned_cols=237  Identities=20%  Similarity=0.293  Sum_probs=175.9

Q ss_pred             cccccccCCCceEEEEEEC--Cc----eEEEEEecccc-cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GK----DVIIFQRKLRR-SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~----~v~vk~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      ..+.||+|+||+||+|.+.  |+    .||+|++.... ....+++.+|+++|++++|||||+++|+|.+++ .+++|||
T Consensus        13 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~~v~e~   91 (317)
T d1xkka_          13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL   91 (317)
T ss_dssp             EEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEEC
T ss_pred             EeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-eeEEEEe
Confidence            3568999999999999985  33    57888765433 235778999999999999999999999998754 6788899


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      +.+|+|.+++.... ..++..+..++                 +||||+|||++.+    +.+||+|||+++.+...  .
T Consensus        92 ~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~----~~~kl~DFGla~~~~~~--~  165 (317)
T d1xkka_          92 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTP----QHVKITDFGLAKLLGAE--E  165 (317)
T ss_dssp             CTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEET----TEEEECCCSHHHHTTTT--C
T ss_pred             ccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCC----CCeEeeccccceecccc--c
Confidence            99999999887643 44444333322                 3566999999876    67999999999876431  2


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........||+.|+|||++.++.|+.++|||||||++|||+| |++||.....                       ..+
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~-----------------------~~~  222 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----------------------SEI  222 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG-----------------------GGH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH-----------------------HHH
Confidence            2223344579999999999999999999999999999999998 7888864321                       111


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESK  362 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~  362 (381)
                      ...+........|..+++.+.+|+.+||+.||.+|||+.||++.|..+.....
T Consensus       223 ~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~~  275 (317)
T d1xkka_         223 SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  275 (317)
T ss_dssp             HHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSHH
T ss_pred             HHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhChH
Confidence            12222233344556677899999999999999999999999999998765433

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.6e-44  Score=337.22  Aligned_cols=238  Identities=15%  Similarity=0.181  Sum_probs=177.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccc---cccHHHHHHH---HHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRR---SLDLEQLRER---LSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~---~~~~~~~~~E---~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|++.  |+.||||++....   ......+.+|   +++++.++|||||++++++.+.+.+|||||
T Consensus         8 i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE   87 (364)
T d1omwa3           8 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILD   87 (364)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEE
Confidence            3577999999999999985  7899999874322   1233344444   667777889999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          168 HVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      ||++|+|.++|.......+..+..++                 +||||+|||++.+    +.+||+|||+|+.+..    
T Consensus        88 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~----g~iKl~DFGla~~~~~----  159 (364)
T d1omwa3          88 LMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH----GHVRISDLGLACDFSK----  159 (364)
T ss_dssp             CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS----SCEEECCCTTCEECSS----
T ss_pred             ecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCC----CcEEEeeeceeeecCC----
Confidence            99999999999887766655444333                 3567999999887    5699999999987532    


Q ss_pred             ccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                        ......+||+.|+|||++.. ..|+.++|||||||++|||++|+.||.......        .. ......       
T Consensus       160 --~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--------~~-~~~~~~-------  221 (364)
T d1omwa3         160 --KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--------KH-EIDRMT-------  221 (364)
T ss_dssp             --SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC--------HH-HHHHHS-------
T ss_pred             --CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH--------HH-HHHHhc-------
Confidence              12345679999999999875 568999999999999999999999997432211        00 000000       


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhhhh
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~~~  367 (381)
                           .......+..+++++.+||.+||+.||.+|||     ++|+   |++-+.+..+|...
T Consensus       222 -----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~ei---l~Hp~f~~i~~~~~  276 (364)
T d1omwa3         222 -----LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEV---KESPFFRSLDWQMV  276 (364)
T ss_dssp             -----SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHH---HTSGGGTTCCHHHH
T ss_pred             -----ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHH---HcCccccCCCHHHH
Confidence                 11122334456788999999999999999999     4555   44555555666554

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-44  Score=330.46  Aligned_cols=225  Identities=15%  Similarity=0.212  Sum_probs=176.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~gs  173 (381)
                      ..+.||+|+||+||+|++.  ++.||||++.... .....+.+|+++|++++|||||++++++.+.+.+|||||||++|+
T Consensus         9 i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~   87 (321)
T d1tkia_           9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD   87 (321)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCB
T ss_pred             EEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCc
Confidence            4578999999999999985  7789999876543 345668899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCC-CCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          174 LADCLRNPR-NPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       174 L~~~l~~~~-~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      |.++|.... ..++.++..++.                 ||+|+|||++.++.  ..+||+|||+++...     .....
T Consensus        88 L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~--~~ikl~DFG~~~~~~-----~~~~~  160 (321)
T d1tkia_          88 IFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS--STIKIIEFGQARQLK-----PGDNF  160 (321)
T ss_dssp             HHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSC--CCEEECCCTTCEECC-----TTCEE
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCc--eEEEEcccchhhccc-----cCCcc
Confidence            999998765 456555544433                 45699999876543  679999999998752     22234


Q ss_pred             cccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhhcc
Q 016850          236 NKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWVDR  315 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (381)
                      ....||+.|+|||.+.+..|+.++|||||||++|+|++|++||.....           .+.......           .
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~-----------~~~~~~i~~-----------~  218 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-----------QQIIENIMN-----------A  218 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-----------HHHHHHHHH-----------T
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH-----------HHHHHHHHh-----------C
Confidence            557799999999999999999999999999999999999999964321           111111111           1


Q ss_pred             cccCCCC----HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          316 RLKDSYP----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       316 ~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .  ..++    ..+++++.+||.+||+.||.+|||+.|+++
T Consensus       219 ~--~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         219 E--YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             C--CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C--CCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1  1111    134678999999999999999999999976

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.7e-44  Score=322.17  Aligned_cols=238  Identities=17%  Similarity=0.222  Sum_probs=173.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC----eeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---DLEQLRERLSVICRSHHSSLIKLLGACVSGN----CGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----~~~lv~  166 (381)
                      ..+.||+|+||+||+|++.  ++.||||++......   ..+.+.+|+++|++++|||||++++++...+    .+||||
T Consensus        11 i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvm   90 (277)
T d1o6ya_          11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVM   90 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEE
Confidence            4577999999999999985  889999997654332   3567899999999999999999999988643    489999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |||++|+|.+++...+...+..+..++.                 ||||+|||++.+    ..++|+|||.++...... 
T Consensus        91 E~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~----~~~~l~d~~~~~~~~~~~-  165 (277)
T d1o6ya_          91 EYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT----NAVKVMDFGIARAIADSG-  165 (277)
T ss_dssp             ECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT----SCEEECCCTTCEECC----
T ss_pred             ECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCcc----ccceeehhhhhhhhcccc-
Confidence            9999999999998877776665544433                 566899988877    459999999987653221 


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........+||+.|+|||++.+..++.++|||||||++|||+||++||.....           .+.....+....   
T Consensus       166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----------~~~~~~~~~~~~---  231 (277)
T d1o6ya_         166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----------VSVAYQHVREDP---  231 (277)
T ss_dssp             -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----------HHHHHHHHHCCC---
T ss_pred             ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH-----------HHHHHHHHhcCC---
Confidence            222334567899999999999999999999999999999999999999963211           111122221110   


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCC-ChHHHHHHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-DMRQVTGLVSKMY  358 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~~~  358 (381)
                            .........+++++.+||.+||+.||.+|| |++++++.|.++.
T Consensus       232 ------~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         232 ------IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             ------CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ------CCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                  001112234567899999999999999999 8999998888764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-44  Score=323.89  Aligned_cols=233  Identities=18%  Similarity=0.232  Sum_probs=166.3

Q ss_pred             ccccccCCCceEEEEEEC---C--ceEEEEEecccc---cccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR---G--KDVIIFQRKLRR---SLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~---~--~~v~vk~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~  168 (381)
                      .+.||+|+||.||+|+++   +  ..||||++....   ....+++.+|+++|++++|||||+++|++.+ +..++||||
T Consensus        13 ~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~   91 (273)
T d1u46a_          13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTEL   91 (273)
T ss_dssp             EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred             EEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeee
Confidence            567999999999999874   2  367888754332   2235789999999999999999999999976 467899999


Q ss_pred             cCCCCHHHHhcCCC-CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCC
Q 016850          169 VSGANLADCLRNPR-NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGN  230 (381)
Q Consensus       169 ~~~gsL~~~l~~~~-~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~  230 (381)
                      |++|+|.+++..+. .+....++.+.                 +||+|+||+++.+    ..+||+|||+++.+.... .
T Consensus        92 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~----~~vkl~DfGl~~~~~~~~-~  166 (273)
T d1u46a_          92 APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR----DLVKIGDFGLMRALPQND-D  166 (273)
T ss_dssp             CTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEET----TEEEECCCTTCEECCC-C-C
T ss_pred             ecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccc----cceeeccchhhhhcccCC-C
Confidence            99999999876543 34444433332                 2456888888776    569999999999864321 1


Q ss_pred             ccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCcccccchhHHHHHHHHHcCCccch
Q 016850          231 ESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV  309 (381)
Q Consensus       231 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (381)
                      .........|++.|+|||++.+..++.++|||||||++|||+| |+.||.....           .+...          
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~-----------~~~~~----------  225 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----------SQILH----------  225 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----------HHHHH----------
T ss_pred             cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH-----------HHHHH----------
Confidence            1223345568899999999999999999999999999999998 8999963221           11111          


Q ss_pred             hhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          310 RKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                       .+.........+..+++.+.+||.+||+.||++|||+.+|++.|++.
T Consensus       226 -~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         226 -KIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             -HHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -HHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence             11122223344556678899999999999999999999999988864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-44  Score=324.50  Aligned_cols=235  Identities=22%  Similarity=0.311  Sum_probs=177.4

Q ss_pred             cccccccCCCceEEEEEECC---------ceEEEEEecccccc-cHHHHHHHHHHHhhc-CCCCcceEEEEEEeCCeeeE
Q 016850           96 LAKKFTSSSASASWRGTIRG---------KDVIIFQRKLRRSL-DLEQLRERLSVICRS-HHSSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~---------~~v~vk~~~~~~~~-~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l  164 (381)
                      ..+.||+|+||.||+|++.+         ..||||+....... ...++.+|+..+.++ +|||||+++++|.+++.+++
T Consensus        17 l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~   96 (299)
T d1fgka_          17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYV   96 (299)
T ss_dssp             EEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             EeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEE
Confidence            35789999999999998742         36888886544332 457788999999998 89999999999999999999


Q ss_pred             EEeccCCCCHHHHhcCCCC----------------CCccchHHH-----------------HHHhhhcceeecccCCCcc
Q 016850          165 VYEHVSGANLADCLRNPRN----------------PSFTVLSTW-----------------LSRMQSSSIIVSEENAGSL  211 (381)
Q Consensus       165 v~e~~~~gsL~~~l~~~~~----------------~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~  211 (381)
                      |||||++|+|.++|.....                +++..++.+                 |+||||+|||++.+    +
T Consensus        97 v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~----~  172 (299)
T d1fgka_          97 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----N  172 (299)
T ss_dssp             EECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT----C
T ss_pred             EEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCC----C
Confidence            9999999999999976542                333333333                 23567999999887    5


Q ss_pred             ceEEcccccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHh-CCccccccccCCccccc
Q 016850          212 CAKICHFGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLS-GEEVLKFVFDEGIDGYR  290 (381)
Q Consensus       212 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~ellt-g~~pf~~~~~~~~~~~~  290 (381)
                      .+||+|||+++......  .........||+.|+|||.+.++.|+.++|||||||++|||++ |.+||.....       
T Consensus       173 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~-------  243 (299)
T d1fgka_         173 VMKIADFGLARDIHHID--YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-------  243 (299)
T ss_dssp             CEEECSTTCCCCGGGCC--TTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-------
T ss_pred             CeEeccchhhccccccc--cccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH-------
Confidence            69999999998764322  2223445679999999999999999999999999999999998 6888853221       


Q ss_pred             chhHHHHHHHHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHH
Q 016850          291 RVSVVDKASEAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYL  359 (381)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~  359 (381)
                           +..           ...+........+..+++.+.+||.+||+.||.+||||.||++.|+++..
T Consensus       244 -----~~~-----------~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         244 -----EEL-----------FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             -----HHH-----------HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----HHH-----------HHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence                 111           11122223344455677889999999999999999999999999999865

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.8e-44  Score=331.69  Aligned_cols=234  Identities=16%  Similarity=0.198  Sum_probs=183.1

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||.||+|++.  |+.||||++...   .....+.+.+|+++|+.++|||||++++++.+.+.+++||||+.
T Consensus        45 i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~  124 (350)
T d1rdqe_          45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA  124 (350)
T ss_dssp             EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             EEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccccccc
Confidence            4578999999999999985  889999987532   22356789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|.+++...+.+++..+..++                 +||||+|||++.+    +.+||+|||+|+.+..       
T Consensus       125 ~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~----g~ikL~DFG~a~~~~~-------  193 (350)
T d1rdqe_         125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ----GYIQVTDFGFAKRVKG-------  193 (350)
T ss_dssp             TCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----SCEEECCCTTCEECSS-------
T ss_pred             ccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCC----CCEEeeeceeeeeccc-------
Confidence            99999999887777665554433                 3567999999876    5699999999987532       


Q ss_pred             cccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhhh
Q 016850          234 KVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKWV  313 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (381)
                      ......||+.|||||++.+..|+.++|||||||++|||++|+.||.....           .........          
T Consensus       194 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~-----------~~~~~~i~~----------  252 (350)
T d1rdqe_         194 RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----------IQIYEKIVS----------  252 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHHHHH----------
T ss_pred             ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH-----------HHHHHHHhc----------
Confidence            23356799999999999999999999999999999999999999963211           111111111          


Q ss_pred             cccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----ChHHHHHHHHHHHHHhhhhhhh
Q 016850          314 DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRP-----DMRQVTGLVSKMYLESKNWADK  367 (381)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L~~~~~~~~~~~~~  367 (381)
                       .  ....+..+++++.+||.+||+.||.+|+     |++++++   +-+.+..+|..+
T Consensus       253 -~--~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~---Hp~f~~~~~~~~  305 (350)
T d1rdqe_         253 -G--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN---HKWFATTDWIAI  305 (350)
T ss_dssp             -C--CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT---SGGGTTCCHHHH
T ss_pred             -C--CCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc---CccccCCCHHHH
Confidence             1  1223445678899999999999999994     7888854   444444556544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-44  Score=329.03  Aligned_cols=228  Identities=14%  Similarity=0.188  Sum_probs=169.4

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhc-CCCCcceEEEEEEe----CCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRS-HHSSLIKLLGACVS----GNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~~~~~lv~e~~~  170 (381)
                      +.||+|+||+||+|++.  ++.||||++..     ...+.+|++++.++ +|||||+++++|.+    ...+|||||||+
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~   92 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   92 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCC
Confidence            45999999999999984  78999998642     35688999997665 89999999999976    467899999999


Q ss_pred             CCCHHHHhcCCC--CCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          171 GANLADCLRNPR--NPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       171 ~gsL~~~l~~~~--~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      ||+|.++|....  .+++.++..++                 +||||+|||+++.+ .+..+||+|||+|+....     
T Consensus        93 gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~-~~~~~Kl~DFG~a~~~~~-----  166 (335)
T d2ozaa1          93 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR-PNAILKLTDFGFAKETTS-----  166 (335)
T ss_dssp             SEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS-TTCCEEECCCTTCEECCC-----
T ss_pred             CCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccc-ccccccccccceeeeccC-----
Confidence            999999998754  34444443332                 35679999987632 236799999999987532     


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      .......+||+.|||||++.+..|+.++|||||||++|+|++|++||.........        ......+..       
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~--------~~~~~~i~~-------  231 (335)
T d2ozaa1         167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--------PGMKTRIRM-------  231 (335)
T ss_dssp             CCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------------CCCS-------
T ss_pred             CCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHH--------HHHHHHHhc-------
Confidence            22334578999999999999999999999999999999999999999754322110        000000000       


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                       ............+++++.+||.+||+.||++|||+.|+++
T Consensus       232 -~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         232 -GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             -CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence             0000111112356788999999999999999999999976

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-44  Score=326.89  Aligned_cols=225  Identities=19%  Similarity=0.231  Sum_probs=177.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccc---ccccHHHHHHHHHHHh-hcCCCCcceEEEEEEeCCeeeEEEecc
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLR---RSLDLEQLRERLSVIC-RSHHSSLIKLLGACVSGNCGYLVYEHV  169 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~---~~~~~~~~~~E~~il~-~l~h~nIv~l~~~~~~~~~~~lv~e~~  169 (381)
                      ..+.||+|+||+||+|++.  ++.||||++...   .....+.+.+|+.++. .++|||||++++++.+++.+|||||||
T Consensus         6 i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~   85 (320)
T d1xjda_           6 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL   85 (320)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeec
Confidence            4678999999999999995  889999997543   2335667788888776 589999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          170 SGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       170 ~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      ++|+|.++|......++.++..++.                 ||+|+|||+++.    +.+||+|||+++....    ..
T Consensus        86 ~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~----~~~kl~DFG~a~~~~~----~~  157 (320)
T d1xjda_          86 NGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKD----GHIKIADFGMCKENML----GD  157 (320)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTT----SCEEECCCTTCBCCCC----TT
T ss_pred             CCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCC----Cceeccccchhhhccc----cc
Confidence            9999999998877777655554433                 456999999876    5699999999986532    22


Q ss_pred             ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhhh
Q 016850          233 GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRKW  312 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (381)
                      .......||+.|+|||++.+..|+.++|||||||++|||++|+.||......        .+..   ....         
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~---~i~~---------  217 (320)
T d1xjda_         158 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFH---SIRM---------  217 (320)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH---HHHH---------
T ss_pred             ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--------HHHH---HHHc---------
Confidence            3344578999999999999999999999999999999999999999642210        1111   1110         


Q ss_pred             hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChH-HHHH
Q 016850          313 VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMR-QVTG  352 (381)
Q Consensus       313 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~  352 (381)
                          ....+|..+++++.+||.+||+.||.+||++. ++++
T Consensus       218 ----~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         218 ----DNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             ----CCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             ----CCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                12234455678899999999999999999995 6753

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-43  Score=321.11  Aligned_cols=239  Identities=16%  Similarity=0.139  Sum_probs=170.1

Q ss_pred             cccccCCCceEEEEEEC--CceEEEEEecccccc-----cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccC
Q 016850           98 KKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL-----DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVS  170 (381)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~  170 (381)
                      +.||+|+||+||+|++.  ++.||||++......     ..+.+.+|+++|++++|||||++++++.+++.+|||||||+
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            56999999999999985  788999987543322     13468899999999999999999999999999999999998


Q ss_pred             CCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      ++++..++.....+.+..+..++                 +||||+|||++.+    +.+||+|||+++.+..    ...
T Consensus        84 ~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~----~~~KL~DFG~a~~~~~----~~~  155 (299)
T d1ua2a_          84 TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDEN----GVLKLADFGLAKSFGS----PNR  155 (299)
T ss_dssp             EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECCCGGGSTTTS----CCC
T ss_pred             chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCC----CccccccCccccccCC----Ccc
Confidence            88877777666666655544433                 3567999999887    5699999999987533    222


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cchhh
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGVRK  311 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  311 (381)
                      .....+||+.|+|||++.+. .|+.++|||||||++|||++|++||.....        ......+........ ..+..
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~--------~~~l~~i~~~~~~~~~~~~~~  227 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD--------LDQLTRIFETLGTPTEEQWPD  227 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCCCCTTTSSS
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCH--------HHHHHHHHHhcCCCChhhccc
Confidence            33456899999999988654 579999999999999999999999964322        111111111110000 00000


Q ss_pred             hh------cccccCCCC-----HHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          312 WV------DRRLKDSYP-----VEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       312 ~~------~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..      .-......+     ...++++.+|+.+||+.||++||||.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         228 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            00      000000111     134678999999999999999999999965

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.7e-43  Score=318.20  Aligned_cols=228  Identities=15%  Similarity=0.199  Sum_probs=177.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc---------cHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL---------DLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~---------~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~  163 (381)
                      ..+.||+|+||+||+|++.  ++.||||++......         ..+.+.+|+.+|++|+ |||||++++++.+++.+|
T Consensus         7 ~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~   86 (277)
T d1phka_           7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFF   86 (277)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             EceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceE
Confidence            4578999999999999984  789999987654322         1346889999999997 999999999999999999


Q ss_pred             EEEeccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEccccccccccc
Q 016850          164 LVYEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      ||||||++|+|.++|..+...++.++..++.                 ||+|+|||++.+    +.+||+|||+++.+..
T Consensus        87 ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~----~~~kl~DFG~a~~~~~  162 (277)
T d1phka_          87 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD----MNIKLTDFGFSCQLDP  162 (277)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT----CCEEECCCTTCEECCT
T ss_pred             EEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCC----CCeEEccchheeEccC
Confidence            9999999999999998877777666655544                 456999999876    5699999999987643


Q ss_pred             CCCCccccccccCCCccccchhhhcC------CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHH
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQAS------GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASE  300 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~  300 (381)
                           ........||+.|+|||++.+      ..++.++||||+||++|||++|+.||.....           ......
T Consensus       163 -----~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~-----------~~~~~~  226 (277)
T d1phka_         163 -----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----------MLMLRM  226 (277)
T ss_dssp             -----TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----------HHHHHH
T ss_pred             -----CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH-----------HHHHHH
Confidence                 122345779999999998853      3478899999999999999999999964221           111111


Q ss_pred             HHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          301 AVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ...+         ...........+++++++|+.+||+.||.+|||+.||++
T Consensus       227 i~~~---------~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         227 IMSG---------NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHT---------CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHhC---------CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1111         001112223457789999999999999999999999865

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=323.49  Aligned_cols=233  Identities=20%  Similarity=0.252  Sum_probs=176.8

Q ss_pred             cccccccCCCceEEEEEEC-------CceEEEEEecccccc-cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEe
Q 016850           96 LAKKFTSSSASASWRGTIR-------GKDVIIFQRKLRRSL-DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYE  167 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-------~~~v~vk~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e  167 (381)
                      ..+.||+|+||.||+|.+.       ++.||||+++..... ....+.+|++++++++|||||+++|++...+..++|||
T Consensus        24 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e  103 (308)
T d1p4oa_          24 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME  103 (308)
T ss_dssp             EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             EeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEe
Confidence            3577999999999999874       468999987543322 34568999999999999999999999999999999999


Q ss_pred             ccCCCCHHHHhcCCC----------CCCccchHH-----------------HHHHhhhcceeecccCCCccceEEccccc
Q 016850          168 HVSGANLADCLRNPR----------NPSFTVLST-----------------WLSRMQSSSIIVSEENAGSLCAKICHFGT  220 (381)
Q Consensus       168 ~~~~gsL~~~l~~~~----------~~~~~~~~~-----------------~~~~l~~~Nill~~~~~~~~~~kl~DFG~  220 (381)
                      ||++|+|.+++....          ......+..                 +|++|+|.|||++.+    +++||+|||+
T Consensus       104 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~----~~~Kl~DFGl  179 (308)
T d1p4oa_         104 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED----FTVKIGDFGM  179 (308)
T ss_dssp             CCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTT----CCEEECCTTC
T ss_pred             ecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCC----ceEEEeeccc
Confidence            999999999986421          112222211                 123567999999887    6799999999


Q ss_pred             ccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCC-ccccccccCCcccccchhHHHHHH
Q 016850          221 AELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGE-EVLKFVFDEGIDGYRRVSVVDKAS  299 (381)
Q Consensus       221 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~-~pf~~~~~~~~~~~~~~~~~~~~~  299 (381)
                      ++.+...  ..........||+.|+|||.+.++.++.++|||||||++|||+||. +||....           ..+...
T Consensus       180 a~~~~~~--~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~-----------~~~~~~  246 (308)
T d1p4oa_         180 TRDIYET--DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----------NEQVLR  246 (308)
T ss_dssp             CCGGGGG--GCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----------HHHHHH
T ss_pred             ceeccCC--cceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC-----------HHHHHH
Confidence            9875432  1222334557899999999999999999999999999999999985 6664321           111111


Q ss_pred             HHHcCCccchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHH
Q 016850          300 EAVAGGVGGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKM  357 (381)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~  357 (381)
                      ...            .......+..+++.+.+||.+||+.||.+|||+.+|++.|++.
T Consensus       247 ~i~------------~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         247 FVM------------EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHH------------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHH------------hCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            111            1112333455678899999999999999999999999998765

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-43  Score=317.29  Aligned_cols=218  Identities=16%  Similarity=0.251  Sum_probs=170.3

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc------cHHHHHHHHHHHhhcC--CCCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL------DLEQLRERLSVICRSH--HSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~------~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||+||+|++.  ++.||||++......      ...++.+|+.+|++++  |||||++++++.+.+..++|
T Consensus         8 i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv   87 (273)
T d1xwsa_           8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI   87 (273)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred             EeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEE
Confidence            3577999999999999985  789999987543211      2244778999999996  89999999999999999999


Q ss_pred             EeccCC-CCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccC
Q 016850          166 YEHVSG-ANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       166 ~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |||+.+ ++|.+++.......+..+..++.                 ||||+|||++.++   ..+||+|||+++.... 
T Consensus        88 ~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~---~~vkl~DFG~a~~~~~-  163 (273)
T d1xwsa_          88 LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR---GELKLIDFGSGALLKD-  163 (273)
T ss_dssp             EECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTT---TEEEECCCTTCEECCS-
T ss_pred             EEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCC---CeEEECccccceeccc-
Confidence            999975 68888888777676665544433                 5679999998543   5699999999986432 


Q ss_pred             CCCccccccccCCCccccchhhhcCCCC-CcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQASGVV-TQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                           .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....                 ...+  
T Consensus       164 -----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----------------i~~~--  219 (273)
T d1xwsa_         164 -----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-----------------IIRG--  219 (273)
T ss_dssp             -----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------------HHHC--
T ss_pred             -----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-----------------Hhhc--
Confidence                 23345789999999999987665 6789999999999999999999963210                 0000  


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                 ...++..+++++.+||.+||+.||++|||++|+++
T Consensus       220 -----------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         220 -----------QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             -----------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----------ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                       01123345678999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-41  Score=307.69  Aligned_cols=240  Identities=16%  Similarity=0.208  Sum_probs=168.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||+||+|++.  ++.||||++......  ..+++.+|+++|++++|||||++++++.+.+++|+|||||. 
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~-   84 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-   84 (298)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             eccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecC-
Confidence            4578999999999999985  889999997554322  35789999999999999999999999999999999999996 


Q ss_pred             CCHHHHhcC--CCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcc
Q 016850          172 ANLADCLRN--PRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNES  232 (381)
Q Consensus       172 gsL~~~l~~--~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~  232 (381)
                      |++.+++..  ...+++..+..++                 +||||+|||++.+    ..+||+|||+|+....    ..
T Consensus        85 ~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~----~~~kl~DFG~a~~~~~----~~  156 (298)
T d1gz8a_          85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE----GAIKLADFGLARAFGV----PV  156 (298)
T ss_dssp             EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECSTTHHHHHCC----CS
T ss_pred             CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeeccc----CcceeccCCcceeccC----Cc
Confidence            555555532  3345555444332                 3567999999876    5699999999987532    22


Q ss_pred             ccccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccch-h
Q 016850          233 GKVNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGV-R  310 (381)
Q Consensus       233 ~~~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  310 (381)
                      .......||+.|+|||++.... ++.++|||||||++|+|++|+.||......        ................. .
T Consensus       157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~~~  228 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTPDEVVWP  228 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCTTTST
T ss_pred             ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH--------HHHHHHHHhcCCCchhhcc
Confidence            3345568999999999877655 588999999999999999999999643211        11111111110000000 0


Q ss_pred             hh---------hcccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          311 KW---------VDRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       311 ~~---------~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..         ........   ....+++++.+|+.+||+.||.+|||+.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             TGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            00         00000000   01234578999999999999999999999975

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.5e-41  Score=305.28  Aligned_cols=241  Identities=15%  Similarity=0.156  Sum_probs=172.1

Q ss_pred             cccccccCCCceEEEEEEC-CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR-GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~-~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||+||+|+++ ++.||||++.....  ...+++.+|+.+|++++|||||++++++.+.+..+++|||+.++
T Consensus         6 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~   85 (286)
T d1ob3a_           6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD   85 (286)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEE
T ss_pred             eccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhh
Confidence            3578999999999999986 78999999755432  24678999999999999999999999999999999999999877


Q ss_pred             CHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCccccc
Q 016850          173 NLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGKV  235 (381)
Q Consensus       173 sL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~  235 (381)
                      .+..+......+++..+..++                 +||||+|||++.+    +.+||+|||++.....    .....
T Consensus        86 ~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~----~~~kl~DfG~a~~~~~----~~~~~  157 (286)
T d1ob3a_          86 LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE----GELKIADFGLARAFGI----PVRKY  157 (286)
T ss_dssp             HHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----SCEEECCTTHHHHHCC---------
T ss_pred             hHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCC----CCEEecccccceeccc----Ccccc
Confidence            777777766666655544333                 3567999999887    5699999999987532    12233


Q ss_pred             cccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc-cchhhh-
Q 016850          236 NKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV-GGVRKW-  312 (381)
Q Consensus       236 ~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-  312 (381)
                      ....|++.|+|||.+.+. .++.++|||||||++|||++|+.||......        .............. ..+... 
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~  229 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--------DQLMRIFRILGTPNSKNWPNVT  229 (286)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCTTTSTTGG
T ss_pred             ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH--------HHHHHHHHhhCCCChhhccchh
Confidence            455799999999988754 5689999999999999999999999643211        11111111110000 000000 


Q ss_pred             -----------hcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          313 -----------VDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       313 -----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                                 ..+..........++.+.+|+.+||+.||++|||++|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             GSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       0000001122345678999999999999999999999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-40  Score=303.14  Aligned_cols=258  Identities=12%  Similarity=0.128  Sum_probs=175.2

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe--------CCeee
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS--------GNCGY  163 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--------~~~~~  163 (381)
                      ..+.||+|+||+||+|++.  |+.||||++.....  ...+++.+|+++|++++||||+++++++..        .+++|
T Consensus        14 i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~   93 (318)
T d3blha1          14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY   93 (318)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEE
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEE
Confidence            4578999999999999984  78999998654432  245778999999999999999999999864        45689


Q ss_pred             EEEeccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEccccccccccc
Q 016850          164 LVYEHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGE  226 (381)
Q Consensus       164 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~  226 (381)
                      +|||||+++.+..+...........+..++                 +||||+|||++.+    +.+||+|||+++.+..
T Consensus        94 iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~----~~~kl~dfg~~~~~~~  169 (318)
T d3blha1          94 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD----GVLKLADFGLARAFSL  169 (318)
T ss_dssp             EEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----SCEEECCCTTCEECCC
T ss_pred             EEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCC----CcEEeeecceeeeccc
Confidence            999999877766666555555544433322                 3567999999887    5699999999987654


Q ss_pred             CCCCccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC
Q 016850          227 VSGNESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG  305 (381)
Q Consensus       227 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (381)
                      ............+||+.|+|||++.+. .|+.++|||||||++|||++|+.||.....        .............-
T Consensus       170 ~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~  241 (318)
T d3blha1         170 AKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--------QHQLALISQLCGSI  241 (318)
T ss_dssp             -----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHHHCCC
T ss_pred             ccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH--------HHHHHHHHHhcCCC
Confidence            333333344557899999999998765 689999999999999999999999964221        11122222221110


Q ss_pred             ccchhh---------hhcccccCCCC-------HHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcC
Q 016850          306 VGGVRK---------WVDRRLKDSYP-------VEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       306 ~~~~~~---------~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                      ......         .+........+       ...++.+++||.+||+.||++|||+.|+++         +.|...--
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~---------Hpff~~~p  312 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN---------HDFFWSDP  312 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH---------SGGGSSSS
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc---------ChhhccCC
Confidence            000000         00000000000       112457889999999999999999999974         66766545


Q ss_pred             CCcce
Q 016850          370 FPTDF  374 (381)
Q Consensus       370 ~~~~~  374 (381)
                      +|.|+
T Consensus       313 ~p~~~  317 (318)
T d3blha1         313 MPSDL  317 (318)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            55553

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=303.49  Aligned_cols=240  Identities=14%  Similarity=0.171  Sum_probs=166.4

Q ss_pred             cccccccCCCceEEEEEEC---CceEEEEEecccccc--cHHHHHHHHHHHhhc---CCCCcceEEEEEEe-----CCee
Q 016850           96 LAKKFTSSSASASWRGTIR---GKDVIIFQRKLRRSL--DLEQLRERLSVICRS---HHSSLIKLLGACVS-----GNCG  162 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~---~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l---~h~nIv~l~~~~~~-----~~~~  162 (381)
                      ..+.||+|+||+||+|++.   ++.||||++......  ....+.+|+.+|+.|   +|||||+++++|..     ...+
T Consensus        11 i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~   90 (305)
T d1blxa_          11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL   90 (305)
T ss_dssp             EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred             EEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceE
Confidence            4578999999999999984   456899987543322  234577888888776   79999999999863     3568


Q ss_pred             eEEEeccCCCCHHHHhcC-CCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEccccccccc
Q 016850          163 YLVYEHVSGANLADCLRN-PRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELC  224 (381)
Q Consensus       163 ~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~  224 (381)
                      +++||||++|.+...... ....++..+..+                 |+||||+|||+++.    +.+||+|||+++..
T Consensus        91 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~----~~~kl~dfg~~~~~  166 (305)
T d1blxa_          91 TLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSS----GQIKLADFGLARIY  166 (305)
T ss_dssp             EEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECSCCSCCCC
T ss_pred             EEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCC----CCeeecchhhhhhh
Confidence            999999987766554433 334444433322                 23667999999887    55999999998764


Q ss_pred             ccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcC
Q 016850          225 GEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAG  304 (381)
Q Consensus       225 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (381)
                      .     .........||+.|+|||++.+..|+.++|||||||++|||++|++||......        ............
T Consensus       167 ~-----~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~  233 (305)
T d1blxa_         167 S-----FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--------DQLGKILDVIGL  233 (305)
T ss_dssp             C-----GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCC
T ss_pred             c-----ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH--------HHHHHHHHhhCC
Confidence            2     223445678999999999999999999999999999999999999999643211        111111111100


Q ss_pred             Cc-cch------h-hhhc---ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          305 GV-GGV------R-KWVD---RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       305 ~~-~~~------~-~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .. ..+      . ....   ......++..+++.+.+|+.+||+.||++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         234 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            00 000      0 0000   00011122345678999999999999999999999865

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=305.47  Aligned_cols=244  Identities=18%  Similarity=0.249  Sum_probs=181.1

Q ss_pred             cccccccCCCceEEEEEE-----CCceEEEEEecccc----cccHHHHHHHHHHHhhcCC-CCcceEEEEEEeCCeeeEE
Q 016850           96 LAKKFTSSSASASWRGTI-----RGKDVIIFQRKLRR----SLDLEQLRERLSVICRSHH-SSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~-----~~~~v~vk~~~~~~----~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv  165 (381)
                      ..+.||+|+||+||+|+.     .|+.||||++....    ....+.+.+|+++|++++| |||+++++++.+.+.+++|
T Consensus        28 ~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v  107 (322)
T d1vzoa_          28 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI  107 (322)
T ss_dssp             EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeee
Confidence            457899999999999987     26789999875432    2245678899999999966 8999999999999999999


Q ss_pred             EeccCCCCHHHHhcCCCCCCccchHHHHH-----------------HhhhcceeecccCCCccceEEcccccccccccCC
Q 016850          166 YEHVSGANLADCLRNPRNPSFTVLSTWLS-----------------RMQSSSIIVSEENAGSLCAKICHFGTAELCGEVS  228 (381)
Q Consensus       166 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~-----------------~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~  228 (381)
                      ||||.+|+|.+++.......+..+..++.                 ||+|+|||++.+    +.+||+|||+++.+..  
T Consensus       108 ~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~----~~vkL~DFG~a~~~~~--  181 (322)
T d1vzoa_         108 LDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN----GHVVLTDFGLSKEFVA--  181 (322)
T ss_dssp             ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----SCEEESCSSEEEECCG--
T ss_pred             eecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCC----CCEEEeeccchhhhcc--
Confidence            99999999999998877666444443332                 566999999887    5699999999987532  


Q ss_pred             CCccccccccCCCccccchhhhcCC--CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          229 GNESGKVNKIEGTRGYMAPEFQASG--VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       229 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                       ..........|++.|+|||.+.+.  .++.++|||||||++|||++|+.||........        ........    
T Consensus       182 -~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~--------~~~i~~~~----  248 (322)
T d1vzoa_         182 -DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--------QAEISRRI----  248 (322)
T ss_dssp             -GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--------HHHHHHHH----
T ss_pred             -cccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHHHhc----
Confidence             223334567899999999998754  468899999999999999999999975433211        11111100    


Q ss_pred             cchhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----hHHHHHHHHHHHHHhhhhhhhcC
Q 016850          307 GGVRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPD-----MRQVTGLVSKMYLESKNWADKIG  369 (381)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~L~~~~~~~~~~~~~~~  369 (381)
                              .......+..+++++.+|+.+||+.||++|||     ++|+   |++-+.+..+|..+..
T Consensus       249 --------~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~ei---l~Hpff~~i~~~~l~~  305 (322)
T d1vzoa_         249 --------LKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEI---KEHLFFQKINWDDLAA  305 (322)
T ss_dssp             --------HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHH---HTSGGGTTCCHHHHHT
T ss_pred             --------ccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHH---HcCHhhcCCCHHHHHh
Confidence                    01122344567889999999999999999996     5555   4444455556665544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-39  Score=301.50  Aligned_cols=235  Identities=15%  Similarity=0.180  Sum_probs=162.5

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCcceEEEEEEe------CCeeeEEEec
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSLIKLLGACVS------GNCGYLVYEH  168 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~~~~lv~e~  168 (381)
                      .+.||+|+||+||+|++.  ++.||||++.....    ...+|+++|++|+|||||+++++|..      ..++||||||
T Consensus        25 ~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey  100 (350)
T d1q5ka_          25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  100 (350)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEEC
T ss_pred             eeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEec
Confidence            367999999999999995  78999998755432    23579999999999999999999864      3357999999


Q ss_pred             cCCCCHHHHh----cCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          169 VSGANLADCL----RNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       169 ~~~gsL~~~l----~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                      |++| +.+.+    .....+++..+..++                 +||||+|||++.++   ..+||+|||+++.+.. 
T Consensus       101 ~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~---~~~kl~DFG~a~~~~~-  175 (350)
T d1q5ka_         101 VPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT---AVLKLCDFGSAKQLVR-  175 (350)
T ss_dssp             CSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT---CCEEECCCTTCEECCT-
T ss_pred             cCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCC---CceeEecccchhhccC-
Confidence            9755 43333    344455554443333                 35679999998653   4699999999987532 


Q ss_pred             CCCccccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCc
Q 016850          228 SGNESGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGV  306 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (381)
                          ........||+.|+|||.+.+ ..|+.++|||||||++|||++|++||......        ..............
T Consensus       176 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~--------~~l~~i~~~~g~~~  243 (350)
T d1q5ka_         176 ----GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--------DQLVEIIKVLGTPT  243 (350)
T ss_dssp             ----TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH--------HHHHHHHHHHCCCC
T ss_pred             ----CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH--------HHHHHHHHHhCCCh
Confidence                223345689999999998765 56899999999999999999999999643221        11111111100000


Q ss_pred             --------cc-----hhhhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 --------GG-----VRKWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 --------~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                              ..     +................++++.+|+.+||+.||++|||+.|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    00     00000000011112345678999999999999999999999875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.9e-39  Score=291.58  Aligned_cols=246  Identities=14%  Similarity=0.117  Sum_probs=171.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCCCCc-ceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSL-IKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||+||+|++.  ++.||||+......  .+++.+|++++++++|+|+ +.+++++.+.+..++||||+ +|
T Consensus        11 l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~   87 (299)
T d1ckia_          11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP   87 (299)
T ss_dssp             EEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CC
Confidence            4578999999999999985  78999998655433  3468899999999987665 55555667888899999999 56


Q ss_pred             CHHHHhcC-CCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCc---
Q 016850          173 NLADCLRN-PRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE---  231 (381)
Q Consensus       173 sL~~~l~~-~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~---  231 (381)
                      +|.+.+.. ...++...+..+                 |+||||+|||++..+ .+..+||+|||+|+.+.......   
T Consensus        88 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~-~~~~vkl~DFG~a~~~~~~~~~~~~~  166 (299)
T d1ckia_          88 SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK-KGNLVYIIDFGLAKKYRDARTHQHIP  166 (299)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG-GTTCEEECCCSSCEECBCTTTCCBCC
T ss_pred             chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccC-CCceeeeeccCcceecccccccccee
Confidence            77666653 444554443332                 235668888765432 12569999999999864322221   


Q ss_pred             cccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchhh
Q 016850          232 SGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVRK  311 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (381)
                      ........||+.|||||++.+..++.++|||||||++|||++|+.||..........    ...........        
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~----~~~~~~~~~~~--------  234 (299)
T d1ckia_         167 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ----KYERISEKKMS--------  234 (299)
T ss_dssp             CCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-----------HHHHHHHHHH--------
T ss_pred             ccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH----HHHHhhcccCC--------
Confidence            123346789999999999999999999999999999999999999997543321110    00000000000        


Q ss_pred             hhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHh
Q 016850          312 WVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLES  361 (381)
Q Consensus       312 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~  361 (381)
                      ...+.    ....+++++.+|+.+||+.||.+||++.++.+.|++++.+.
T Consensus       235 ~~~~~----~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         235 TPIEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             SCHHH----HTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CChhH----hccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence            00000    11234578999999999999999999999999999987643

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=9.3e-39  Score=289.97  Aligned_cols=258  Identities=16%  Similarity=0.159  Sum_probs=185.0

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcCC-CCcceEEEEEEeCCeeeEEEeccCCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSHH-SSLIKLLGACVSGNCGYLVYEHVSGA  172 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~lv~e~~~~g  172 (381)
                      ..+.||+|+||+||+|++.  ++.||||+.....  ..+.+.+|+++++.|+| +||+.+++++.++...++||||+ +|
T Consensus         9 i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~   85 (293)
T d1csna_           9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GP   85 (293)
T ss_dssp             EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CC
Confidence            4678999999999999985  7889999864433  23467889999999965 89999999999999999999999 79


Q ss_pred             CHHHHhcCCC-CCCccchHHH-----------------HHHhhhcceeecccCC-CccceEEcccccccccccCCCCcc-
Q 016850          173 NLADCLRNPR-NPSFTVLSTW-----------------LSRMQSSSIIVSEENA-GSLCAKICHFGTAELCGEVSGNES-  232 (381)
Q Consensus       173 sL~~~l~~~~-~~~~~~~~~~-----------------~~~l~~~Nill~~~~~-~~~~~kl~DFG~a~~~~~~~~~~~-  232 (381)
                      +|.+++.... .+....+..+                 |+||||+|||++.... ....+||+|||+|+.+........ 
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~  165 (293)
T d1csna_          86 SLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI  165 (293)
T ss_dssp             BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC
T ss_pred             CHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccce
Confidence            9999987644 3443333322                 2356788888875321 225699999999987643222211 


Q ss_pred             --ccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccchh
Q 016850          233 --GKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGGVR  310 (381)
Q Consensus       233 --~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
                        ......+||+.|||||++.+..++.++|||||||++|||++|+.||........     ............       
T Consensus       166 ~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~-----~~~~~~i~~~~~-------  233 (293)
T d1csna_         166 PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-----KQKYERIGEKKQ-------  233 (293)
T ss_dssp             CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-----HHHHHHHHHHHH-------
T ss_pred             eecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH-----HHHHHHHHhccC-------
Confidence              223457899999999999999999999999999999999999999974332111     011111100000       


Q ss_pred             hhhcccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHHHHHHHHHHhhhhhhhcCCCccee
Q 016850          311 KWVDRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTGLVSKMYLESKNWADKIGFPTDFS  375 (381)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~~~~~~~~~~  375 (381)
                      ....+.+    ...+++++.+++..|+..+|.+||++..+.+.|++++.+..   ...+-+.||+
T Consensus       234 ~~~~~~l----~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~---~~~~~~~Dw~  291 (293)
T d1csna_         234 STPLREL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN---TTEDENFDWN  291 (293)
T ss_dssp             HSCHHHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT---CCSCSCCGGG
T ss_pred             CCChHHh----cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcC---CCCCCCCCCC
Confidence            0000011    11245679999999999999999999999999999876543   3334566765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-39  Score=301.71  Aligned_cols=235  Identities=18%  Similarity=0.165  Sum_probs=162.1

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCC------eeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGN------CGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~~~lv~  166 (381)
                      .+.||+|+||+||+|++.  |+.||||++......  ..+.+.+|+++|++++|||||+++++|...+      ++||||
T Consensus        23 i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~  102 (346)
T d1cm8a_          23 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM  102 (346)
T ss_dssp             EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred             EEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEE
Confidence            567999999999999985  889999997543222  3567899999999999999999999998654      579999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      ||| +++|..+++.. .+++..+..++                 +||||+|||++.+    +.+||+|||+++....   
T Consensus       103 e~~-~~~l~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~----~~~kl~Dfg~a~~~~~---  173 (346)
T d1cm8a_         103 PFM-GTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED----CELKILDFGLARQADS---  173 (346)
T ss_dssp             ECC-SEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEECCS---
T ss_pred             ecc-cccHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccc----cccccccccceeccCC---
Confidence            999 67888877654 45544433332                 3566999999877    5699999999987432   


Q ss_pred             CccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCC---
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGG---  305 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---  305 (381)
                          ......||+.|+|||++.+. .++.++||||+||++|||++|++||......        .............   
T Consensus       174 ----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~  241 (346)
T d1cm8a_         174 ----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--------DQLKEIMKVTGTPPAE  241 (346)
T ss_dssp             ----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCCCCHH
T ss_pred             ----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH--------HHHHHHHhccCCCcHH
Confidence                23457799999999988764 5689999999999999999999999643221        0111100000000   


Q ss_pred             -----ccch----hhhhccccc---CCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          306 -----VGGV----RKWVDRRLK---DSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       306 -----~~~~----~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                           ....    .........   ......+++.+.+||.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                 0000    000000000   0112345678999999999999999999999976

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-39  Score=292.96  Aligned_cols=242  Identities=12%  Similarity=0.073  Sum_probs=175.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeCCeeeEEEeccCC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSGNCGYLVYEHVSG  171 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lv~e~~~~  171 (381)
                      ..+.||+|+||+||+|++.  ++.||||+++.....  ..+++.+|+.+|++++|||||++++++.+.+..++||||+.+
T Consensus         6 ~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~   85 (292)
T d1unla_           6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_dssp             EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSE
T ss_pred             eeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccc
Confidence            3578999999999999985  778999997554332  467899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCcccc
Q 016850          172 ANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESGK  234 (381)
Q Consensus       172 gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  234 (381)
                      ++|..++...+......+..++                 +||||+|||++.+    ..+||+|||.++....    ....
T Consensus        86 ~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~----~~~kl~DFG~a~~~~~----~~~~  157 (292)
T d1unla_          86 DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRN----GELKLANFGLARAFGI----PVRC  157 (292)
T ss_dssp             EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT----CCEEECCCTTCEECCS----CCSC
T ss_pred             cccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccC----CceeeeecchhhcccC----CCcc
Confidence            9999998887777655544333                 3566888888876    4599999999987543    2223


Q ss_pred             ccccCCCccccchhhhcCCC-CCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc----h
Q 016850          235 VNKIEGTRGYMAPEFQASGV-VTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG----V  309 (381)
Q Consensus       235 ~~~~~gt~~y~aPE~~~~~~-~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  309 (381)
                      .....+++.|+|||++.+.. ++.++|||||||++|||++|+.||....+.       .................    .
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~  230 (292)
T d1unla_         158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-------DDQLKRIFRLLGTPTEEQWPSM  230 (292)
T ss_dssp             CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-------HHHHHHHHHHHCCCCTTTCTTG
T ss_pred             ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCH-------HHHHHHHHhhcCCCChhhhhhh
Confidence            33456789999999887655 689999999999999999999997422110       11111111111110000    0


Q ss_pred             hhhh---------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          310 RKWV---------DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       310 ~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ....         ............++.+.+|+.+||+.||.+||||+|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             GGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000         000011123345678999999999999999999999865

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-39  Score=298.14  Aligned_cols=243  Identities=16%  Similarity=0.182  Sum_probs=164.7

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEeccccc-ccHHHHHHHHHHHhhcCCCCcceEEEEEEeCC----eeeEEEec
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS-LDLEQLRERLSVICRSHHSSLIKLLGACVSGN----CGYLVYEH  168 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----~~~lv~e~  168 (381)
                      ..+.||+|+||+||+|++.  ++.||||++..... ...+++.+|+++|++|+|||||++++++....    ..+++++|
T Consensus        12 ~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~   91 (345)
T d1pmea_          12 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTH   91 (345)
T ss_dssp             EEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEE
T ss_pred             EEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEe
Confidence            3578999999999999985  88999998754332 24567899999999999999999999997643    23344455


Q ss_pred             cCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCCCc
Q 016850          169 VSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNE  231 (381)
Q Consensus       169 ~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~  231 (381)
                      +.+|+|.+++... .+++..+..++                 +||||+|||++.+    +.+||+|||+++....... .
T Consensus        92 ~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~----~~~kl~DfG~a~~~~~~~~-~  165 (345)
T d1pmea_          92 LMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT----CDLKICDFGLARVADPDHD-H  165 (345)
T ss_dssp             CCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT----CCEEECCCTTCEECCGGGC-B
T ss_pred             ecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCC----CCEEEcccCceeeccCCCc-c
Confidence            5699999999765 34544443332                 3667999999876    5699999999987543221 1


Q ss_pred             cccccccCCCccccchhhhcC-CCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCcc---
Q 016850          232 SGKVNKIEGTRGYMAPEFQAS-GVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVG---  307 (381)
Q Consensus       232 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  307 (381)
                      .......+||+.|+|||++.. ..++.++||||+||++|||++|+.||.......        ..............   
T Consensus       166 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~~~  237 (345)
T d1pmea_         166 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--------QLNHILGILGSPSQEDL  237 (345)
T ss_dssp             CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHHHCSCCHHHH
T ss_pred             ceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH--------HHHHHhhhccCCChhhh
Confidence            223456789999999998854 467899999999999999999999996432210        00000000000000   


Q ss_pred             ------chhh-hhcccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          308 ------GVRK-WVDRRLKDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       308 ------~~~~-~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                            .... ..........     ....++++++|+.+||+.||.+|||+.|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  0000 0000000001     1134568999999999999999999999976

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=8.5e-39  Score=295.17  Aligned_cols=243  Identities=13%  Similarity=0.154  Sum_probs=167.9

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEe--CCeeeEEEeccC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVS--GNCGYLVYEHVS  170 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~--~~~~~lv~e~~~  170 (381)
                      ..+.||+|+||+||+|++.  ++.||||++..   ...+++.+|+++|++++ ||||++++++|..  ...+++|||||+
T Consensus        39 i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~  115 (328)
T d3bqca1          39 LVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVN  115 (328)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCC
T ss_pred             EEEEEecCcCeEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecC
Confidence            4578999999999999985  88999998653   23578999999999995 9999999999984  456899999999


Q ss_pred             CCCHHHHhcCCCCCCccchHHH-----------------HHHhhhcceeecccCCCccceEEcccccccccccCCCCccc
Q 016850          171 GANLADCLRNPRNPSFTVLSTW-----------------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSGNESG  233 (381)
Q Consensus       171 ~gsL~~~l~~~~~~~~~~~~~~-----------------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~  233 (381)
                      +|+|..+.+   .+.+..+..+                 |+||||+|||++.++   ..+||+|||+|+.+..     ..
T Consensus       116 ~~~L~~~~~---~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~---~~vkl~DFG~a~~~~~-----~~  184 (328)
T d3bqca1         116 NTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH---RKLRLIDWGLAEFYHP-----GQ  184 (328)
T ss_dssp             SCBGGGTTT---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT---TEEEECCGGGCEECCT-----TC
T ss_pred             CCcHHHHhc---CCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCC---CeeeecccccceeccC-----CC
Confidence            999988753   3443333322                 235679999998653   4599999999987532     12


Q ss_pred             cccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchh------HHHHHHHHHcCCc
Q 016850          234 KVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVS------VVDKASEAVAGGV  306 (381)
Q Consensus       234 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  306 (381)
                      .....+||+.|+|||.+.+. .++.++||||+||++|||++|+.||...............      ...+.........
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence            34456799999999988765 4799999999999999999999999643221100000000      0000000000000


Q ss_pred             cchhhhh--------cccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          307 GGVRKWV--------DRRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       307 ~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      ..+....        ...........+++++.+||.+||+.||++|||++|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000000        000111122345678999999999999999999999965

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=296.81  Aligned_cols=244  Identities=19%  Similarity=0.121  Sum_probs=159.7

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccccc--ccHHHHHHHHHHHhhcCCCCcceEEEEEEe------CCeeeEEE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLRRS--LDLEQLRERLSVICRSHHSSLIKLLGACVS------GNCGYLVY  166 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~~~~lv~  166 (381)
                      .+.||+|+||+||+|.+.  |+.||||++.....  ....++.+|+.+|++++|||||+++++|..      ...+|+||
T Consensus        22 ~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~  101 (355)
T d2b1pa1          22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM  101 (355)
T ss_dssp             EEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred             EEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEE
Confidence            468999999999999985  89999999754432  245678999999999999999999999964      46889999


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      |||. |+|.+.+..  .+++..+..++                 +||||+|||++.+    ..+|++|||+++....   
T Consensus       102 Ey~~-~~l~~~~~~--~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~----~~~kl~df~~~~~~~~---  171 (355)
T d2b1pa1         102 ELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----CTLKILDFGLARTAGT---  171 (355)
T ss_dssp             ECCS-EEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT----CCEEECCCCC---------
T ss_pred             eccc-hHHHHhhhc--CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccc----cceeeechhhhhcccc---
Confidence            9996 566666643  34444433332                 3567999999887    5599999999876432   


Q ss_pred             CccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccc-----------cchhHHHHH
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGY-----------RRVSVVDKA  298 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~-----------~~~~~~~~~  298 (381)
                        .......+||+.|+|||++.+..++.++||||+||++|||++|++||...........           .........
T Consensus       172 --~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  249 (355)
T d2b1pa1         172 --SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV  249 (355)
T ss_dssp             -----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHH
T ss_pred             --ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhH
Confidence              2334566799999999999999999999999999999999999999964321100000           000000000


Q ss_pred             HHHHcCC----ccchhhhhcccccCC---CCHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          299 SEAVAGG----VGGVRKWVDRRLKDS---YPVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       299 ~~~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .......    .......+.......   .....++++.+|+.+||+.||++||||+|||+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0000000    001111111111111   12456789999999999999999999999964

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-37  Score=289.93  Aligned_cols=237  Identities=17%  Similarity=0.164  Sum_probs=163.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccc--cHHHHHHHHHHHhhcCCCCcceEEEEEEeC-----CeeeEEE
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSL--DLEQLRERLSVICRSHHSSLIKLLGACVSG-----NCGYLVY  166 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~--~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~~lv~  166 (381)
                      ..+.||+|+||+||+|++.  |+.||||++......  ..+++.+|+++|++|+|||||++++++...     ...++||
T Consensus        22 i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~  101 (348)
T d2gfsa1          22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV  101 (348)
T ss_dssp             EEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEE
T ss_pred             EEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEE
Confidence            3578999999999999984  889999997644322  456788999999999999999999998643     3346667


Q ss_pred             eccCCCCHHHHhcCCCCCCccchHHHH-----------------HHhhhcceeecccCCCccceEEcccccccccccCCC
Q 016850          167 EHVSGANLADCLRNPRNPSFTVLSTWL-----------------SRMQSSSIIVSEENAGSLCAKICHFGTAELCGEVSG  229 (381)
Q Consensus       167 e~~~~gsL~~~l~~~~~~~~~~~~~~~-----------------~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~~~  229 (381)
                      +|+.+|+|.+++... .+++..+..++                 +||||+|||++.+    +.+|++|||++....    
T Consensus       102 ~~~~gg~L~~~~~~~-~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~----~~~kl~dfg~a~~~~----  172 (348)
T d2gfsa1         102 THLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED----CELKILDFGLARHTD----  172 (348)
T ss_dssp             EECCSEEHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT----CCEEECCC----CCT----
T ss_pred             EeecCCchhhhcccc-cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccccc----ccccccccchhcccC----
Confidence            777899999999764 45544443332                 3567999999887    569999999997642    


Q ss_pred             CccccccccCCCccccchhhhcCC-CCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHHHHHHHcCCccc
Q 016850          230 NESGKVNKIEGTRGYMAPEFQASG-VVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDKASEAVAGGVGG  308 (381)
Q Consensus       230 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (381)
                         .......||+.|+|||++.+. .++.++|||||||++|+|++|++||......        ................
T Consensus       173 ---~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~--------~~~~~i~~~~~~~~~~  241 (348)
T d2gfsa1         173 ---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--------DQLKLILRLVGTPGAE  241 (348)
T ss_dssp             ---GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCHH
T ss_pred             ---cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhcCCCChH
Confidence               234457799999999987765 4689999999999999999999999643211        1111111111000000


Q ss_pred             h---------hhhhcccc-cCCC-----CHHHHHHHHHHHHHhhccCCCCCCChHHHHH
Q 016850          309 V---------RKWVDRRL-KDSY-----PVEVAEKMVLLGLQCVDEDPGKRPDMRQVTG  352 (381)
Q Consensus       309 ~---------~~~~~~~~-~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~  352 (381)
                      .         ........ ....     ...+++.+++||.+||+.||.+|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         242 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0         00000000 0000     1134678999999999999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=9.5e-32  Score=250.99  Aligned_cols=247  Identities=15%  Similarity=0.164  Sum_probs=159.6

Q ss_pred             cccccccCCCceEEEEEEC--CceEEEEEecccccccHHHHHHHHHHHhhcC-----------CCCcceEEEEEEe--CC
Q 016850           96 LAKKFTSSSASASWRGTIR--GKDVIIFQRKLRRSLDLEQLRERLSVICRSH-----------HSSLIKLLGACVS--GN  160 (381)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-----------h~nIv~l~~~~~~--~~  160 (381)
                      ..+.||+|+||+||+|+..  |+.||||+++... ...+.+.+|+++|++++           |+|||++++++..  ..
T Consensus        17 i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~   95 (362)
T d1q8ya_          17 LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPN   95 (362)
T ss_dssp             EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETT
T ss_pred             EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecccc
Confidence            4678999999999999984  8899999975432 23567889999998875           5789999998864  45


Q ss_pred             eeeEEEeccCCCCHHHH-hc--CCCCCCccchH------------------HHHHHhhhcceeecccCC--CccceEEcc
Q 016850          161 CGYLVYEHVSGANLADC-LR--NPRNPSFTVLS------------------TWLSRMQSSSIIVSEENA--GSLCAKICH  217 (381)
Q Consensus       161 ~~~lv~e~~~~gsL~~~-l~--~~~~~~~~~~~------------------~~~~~l~~~Nill~~~~~--~~~~~kl~D  217 (381)
                      ..+++|+++..+..... ..  ......+..+.                  .+|+||||+|||++..+.  ....++|+|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~d  175 (362)
T d1q8ya_          96 GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIAD  175 (362)
T ss_dssp             EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECC
T ss_pred             ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEee
Confidence            56677777655443222 22  22233322222                  223356788888875431  123489999


Q ss_pred             cccccccccCCCCccccccccCCCccccchhhhcCCCCCcchhHHHHHHHHHHHHhCCccccccccCCcccccchhHHHH
Q 016850          218 FGTAELCGEVSGNESGKVNKIEGTRGYMAPEFQASGVVTQKCDVYAFGVVVLELLSGEEVLKFVFDEGIDGYRRVSVVDK  297 (381)
Q Consensus       218 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDIwSlGvil~elltg~~pf~~~~~~~~~~~~~~~~~~~  297 (381)
                      ||.+.....       .....+||+.|+|||++.+..++.++||||+||++++|++|+.||..........  .......
T Consensus       176 fg~s~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~--~~~~~~~  246 (362)
T d1q8ya_         176 LGNACWYDE-------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK--DDDHIAQ  246 (362)
T ss_dssp             CTTCEETTB-------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C--HHHHHHH
T ss_pred             ccccccccc-------ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccc--hhHHHHH
Confidence            999976432       2345679999999999999999999999999999999999999997533221110  0001100


Q ss_pred             HHHHHcCCc-------cchhhhhc-------------------ccccCCCCHHHHHHHHHHHHHhhccCCCCCCChHHHH
Q 016850          298 ASEAVAGGV-------GGVRKWVD-------------------RRLKDSYPVEVAEKMVLLGLQCVDEDPGKRPDMRQVT  351 (381)
Q Consensus       298 ~~~~~~~~~-------~~~~~~~~-------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl  351 (381)
                      ....+....       .......+                   ...........++++.+|+.+||+.||.+||||+|+|
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            000000000       00000000                   0012234567889999999999999999999999986


Q ss_pred             H
Q 016850          352 G  352 (381)
Q Consensus       352 ~  352 (381)
                      +
T Consensus       327 ~  327 (362)
T d1q8ya_         327 N  327 (362)
T ss_dssp             T
T ss_pred             c
Confidence            4

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.66  E-value=3.3e-17  Score=137.62  Aligned_cols=151  Identities=14%  Similarity=0.138  Sum_probs=97.0

Q ss_pred             ccccccCCCceEEEEEE-CCceEEEEEecccccc------------------cHHHHHHHHHHHhhcCCCCcceEEEEEE
Q 016850           97 AKKFTSSSASASWRGTI-RGKDVIIFQRKLRRSL------------------DLEQLRERLSVICRSHHSSLIKLLGACV  157 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~-~~~~v~vk~~~~~~~~------------------~~~~~~~E~~il~~l~h~nIv~l~~~~~  157 (381)
                      ++.||+|+||.||+|++ +|+.||||+.+.....                  ......+|+..|.++.|.+++..+++. 
T Consensus         5 g~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~-   83 (191)
T d1zara2           5 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE-   83 (191)
T ss_dssp             EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE-
T ss_pred             CCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec-
Confidence            67899999999999987 4889999975431110                  123345788999999999999988763 


Q ss_pred             eCCeeeEEEeccCCCCHHHHhcCCCCCCccchHHH----------HHHhhhcceeecccCCCccceEEcccccccccccC
Q 016850          158 SGNCGYLVYEHVSGANLADCLRNPRNPSFTVLSTW----------LSRMQSSSIIVSEENAGSLCAKICHFGTAELCGEV  227 (381)
Q Consensus       158 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~----------~~~l~~~Nill~~~~~~~~~~kl~DFG~a~~~~~~  227 (381)
                       .  .++||||++++.+.++-......-..++...          |+||||+|||+++.+     ++|+|||+|......
T Consensus        84 -~--~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-----~~liDFG~a~~~~~~  155 (191)
T d1zara2          84 -G--NAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-----IWIIDFPQSVEVGEE  155 (191)
T ss_dssp             -T--TEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE-----EEECCCTTCEETTST
T ss_pred             -C--CEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCCC-----EEEEECCCcccCCCC
Confidence             2  3799999987666543222111111222222          346778898888653     899999999764221


Q ss_pred             CCCccccccccCCCccccch------hhhcCCCCCcchhHHHHHHHHH
Q 016850          228 SGNESGKVNKIEGTRGYMAP------EFQASGVVTQKCDVYAFGVVVL  269 (381)
Q Consensus       228 ~~~~~~~~~~~~gt~~y~aP------E~~~~~~~~~~sDIwSlGvil~  269 (381)
                      .    .        ..|...      +.+ ...|+.++|+||+.--++
T Consensus       156 ~----~--------~~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~~  190 (191)
T d1zara2         156 G----W--------REILERDVRNIITYF-SRTYRTEKDINSAIDRIL  190 (191)
T ss_dssp             T----H--------HHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHH
T ss_pred             C----c--------HHHHHHHHHHHHHHH-cCCCCCcccHHHHHHHHh
Confidence            0    0        011111      111 356889999999865443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.90  E-value=4.2e-05  Score=65.31  Aligned_cols=91  Identities=9%  Similarity=0.025  Sum_probs=63.6

Q ss_pred             HHHHhcCCcccccc-cCCCceEEEEEECCceEEEEEecccccccHHHHHHHHHHHhhcC-CCCcceEEEEEEeCCeeeEE
Q 016850           88 ICAATNNFLAKKFT-SSSASASWRGTIRGKDVIIFQRKLRRSLDLEQLRERLSVICRSH-HSSLIKLLGACVSGNCGYLV  165 (381)
Q Consensus        88 ~~~~~~~f~~~~lg-~G~~g~V~~~~~~~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lv  165 (381)
                      +......+...+.. .++.+.||+....++.+++|+...........+.+|...+..|. +--+.+++++..+++..++|
T Consensus         9 l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv   88 (263)
T d1j7la_           9 LKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL   88 (263)
T ss_dssp             HHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             HHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEE
Confidence            33333444333333 34457899998888889888865444444556788999888874 43467888888888999999


Q ss_pred             EeccCCCCHHHHh
Q 016850          166 YEHVSGANLADCL  178 (381)
Q Consensus       166 ~e~~~~gsL~~~l  178 (381)
                      |++++|.++.+..
T Consensus        89 ~~~l~G~~~~~~~  101 (263)
T d1j7la_          89 MSEADGVLCSEEY  101 (263)
T ss_dssp             EECCSSEEHHHHT
T ss_pred             EEecccccccccc
Confidence            9999988775543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.11  E-value=0.00032  Score=59.17  Aligned_cols=74  Identities=15%  Similarity=0.228  Sum_probs=51.7

Q ss_pred             ccccCC-CceEEEEEECCce-EEEEEecccccccHHHHHHHHHHHhhcC--CCCcceEEEEEEeCCeeeEEEeccCCCCH
Q 016850           99 KFTSSS-ASASWRGTIRGKD-VIIFQRKLRRSLDLEQLRERLSVICRSH--HSSLIKLLGACVSGNCGYLVYEHVSGANL  174 (381)
Q Consensus        99 ~lg~G~-~g~V~~~~~~~~~-v~vk~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~~~~~lv~e~~~~gsL  174 (381)
                      .+..|. .+.||+...+++. +++|.....   ....+.+|...|+.|.  .-.+.+++++..+++..++||+|++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            444444 3689999987554 566654322   2345788888888773  33467788888888889999999987665


Q ss_pred             H
Q 016850          175 A  175 (381)
Q Consensus       175 ~  175 (381)
                      .
T Consensus        94 ~   94 (255)
T d1nd4a_          94 L   94 (255)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.92  E-value=0.015  Score=52.17  Aligned_cols=75  Identities=15%  Similarity=0.152  Sum_probs=50.2

Q ss_pred             ccccccCCCceEEEEEEC--CceEEEEEeccc-------ccccHHHHHHHHHHHhhc-CC--CCcceEEEEEEeCCeeeE
Q 016850           97 AKKFTSSSASASWRGTIR--GKDVIIFQRKLR-------RSLDLEQLRERLSVICRS-HH--SSLIKLLGACVSGNCGYL  164 (381)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~v~vk~~~~~-------~~~~~~~~~~E~~il~~l-~h--~nIv~l~~~~~~~~~~~l  164 (381)
                      .+.||.|....||+....  ++.+++|.....       .....++..+|.++|+.+ .+  ..+.+++.+  +.+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            457899999999999864  567888764321       112345677799888877 23  356667655  4555679


Q ss_pred             EEeccCCCC
Q 016850          165 VYEHVSGAN  173 (381)
Q Consensus       165 v~e~~~~gs  173 (381)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997643

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.065  Score=46.32  Aligned_cols=67  Identities=7%  Similarity=0.074  Sum_probs=43.6

Q ss_pred             ceEEEEEEC-CceEEEEEecccccccHHHHHHHHHHHhhcCCCCc-----ceEE--EEEEeCCeeeEEEeccCCCC
Q 016850          106 SASWRGTIR-GKDVIIFQRKLRRSLDLEQLRERLSVICRSHHSSL-----IKLL--GACVSGNCGYLVYEHVSGAN  173 (381)
Q Consensus       106 g~V~~~~~~-~~~v~vk~~~~~~~~~~~~~~~E~~il~~l~h~nI-----v~l~--~~~~~~~~~~lv~e~~~~gs  173 (381)
                      -.||+++.+ |..+++|+.+.. ....+++..|...|..|....|     +..-  ..+...+..+.++++++|..
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            579999985 667888875432 2356788899999888742211     1111  12234667889999997543