Citrus Sinensis ID: 016875

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS
cEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccc
ccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHccccccccHHHHHccccHHHcccccccccccccEEHccEEEEccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHEEHcHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccc
MLTIQAYSkslhppdcgkssclKGAIAAYFYGSLYLYslgcggnrgtlpalgagqfdendpkGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAigkpfyriqqpgesplvRVAQVIVVAIKnrklslpdnpeelyeinkiervgteeriphtnqfrcldkaaivpkdstaaapwrvctVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVtqgaymdprlgsikvptpsipvlpLLFMAILIPiyeflfvpfarkitghpagitqLQRVGVGLVLSVISMTIAGFVEVkrrnafnqsppkqISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS
MLTIQAYskslhppdcGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIknrklslpdnpeelYEINKiervgteeriphtnqfrcldkaaivpkdstaaapwrvctvTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS
MLTIQAYSKSLHPPDCGKSSCLKGAIAAyfygslylyslgcggNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTlllhlhfchchlATS
*****************KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE***KGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHL***
MLTIQAYSKSLHP***********AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN*****KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELY*****************NQFRCLDKAAI***************VTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT*
MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS
MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
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MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLATS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query381 2.2.26 [Sep-21-2011]
Q93VV5591 Probable peptide/nitrate yes no 0.979 0.631 0.429 3e-81
Q8VYE4567 Probable peptide/nitrate no no 0.944 0.634 0.404 2e-79
Q8H157585 Nitrate transporter 1.2 O no no 0.968 0.630 0.389 3e-77
Q56XQ6601 Probable peptide/nitrate no no 0.963 0.610 0.395 3e-72
Q93Z20590 Probable peptide/nitrate no no 0.887 0.572 0.420 6e-72
P46032585 Peptide transporter PTR2 no no 0.960 0.625 0.372 5e-71
Q9LFB8570 Peptide transporter PTR5 no no 0.958 0.640 0.384 1e-70
Q9M390570 Peptide transporter PTR1 no no 0.955 0.638 0.366 1e-70
Q9LYR6624 Probable peptide/nitrate no no 0.921 0.562 0.394 6e-69
Q9FM20589 Probable peptide/nitrate no no 0.931 0.602 0.360 4e-64
>sp|Q93VV5|PTR16_ARATH Probable peptide/nitrate transporter At1g59740 OS=Arabidopsis thaliana GN=At1g59740 PE=2 SV=1 Back     alignment and function desciption
 Score =  302 bits (774), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 164/382 (42%), Positives = 242/382 (63%), Gaps = 9/382 (2%)

Query: 1   MLTIQAYSKSLHPPDCG---KSSC--LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQ 55
           +L++QA+   L PP C      +C   KG  A  F+ +LYL +LG G  +  + A GA Q
Sbjct: 129 LLSVQAHLPQLKPPKCNPLIDQTCEEAKGFKAMIFFMALYLVALGSGCVKPNMIAHGADQ 188

Query: 56  FDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 115
           F ++ PK +K L+SYFN   FA ++  +I +T +V+V    G  +GF +S+ A  +G+I+
Sbjct: 189 FSQSHPKQSKRLSSYFNAAYFAFSMGELIALTLLVWVQTHSGMDIGFGVSAAAMTMGIIS 248

Query: 116 LAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKI-ERVGTEERIP 174
           L  G  ++R ++P  S    +A VIV AI  RKL+ P +P  L+  + +   V     +P
Sbjct: 249 LVSGTMYFRNKRPRRSIFTPIAHVIVAAILKRKLASPSDPRMLHGDHHVANDVVPSSTLP 308

Query: 175 HTNQFRCLDKAAIVPKDS-TAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQ 233
           HT +FR LDKA I  +D+ T  +PWR+CTVTQVE+VK L  ++PI ASTI+ NT LAQLQ
Sbjct: 309 HTPRFRFLDKACIKIQDTNTKESPWRLCTVTQVEQVKTLISLVPIFASTIVFNTILAQLQ 368

Query: 234 TLSVTQGAYMDPRL-GSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQ 292
           T SV QG+ M+ RL  S  +P  S+  +P + +  L+P+Y+   VPFARK+TGH +GI  
Sbjct: 369 TFSVQQGSSMNTRLSNSFHIPPASLQAIPYIMLIFLVPLYDSFLVPFARKLTGHNSGIPP 428

Query: 293 LQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGL 352
           L R+G+GL LS  SM  A  +E KRR++ +    + +S+FW++ Q+ IFGI++MFT VGL
Sbjct: 429 LTRIGIGLFLSTFSMVSAAMLEKKRRDS-SVLDGRILSIFWITPQFLIFGISEMFTAVGL 487

Query: 353 LEFFYKEAPAGMRTLLLHLHFC 374
           +EFFYK++  GM + L+ L +C
Sbjct: 488 IEFFYKQSAKGMESFLMALTYC 509

Arabidopsis thaliana (taxid: 3702)
>sp|Q8VYE4|PTR12_ARATH Probable peptide/nitrate transporter At1g27040 OS=Arabidopsis thaliana GN=At1g27040 PE=2 SV=1 Back     alignment and function description
>sp|Q8H157|PTR19_ARATH Nitrate transporter 1.2 OS=Arabidopsis thaliana GN=NRT1.2 PE=1 SV=1 Back     alignment and function description
>sp|Q56XQ6|PTR15_ARATH Probable peptide/nitrate transporter At1g33440 OS=Arabidopsis thaliana GN=At1g33440 PE=2 SV=1 Back     alignment and function description
>sp|Q93Z20|PTR17_ARATH Probable peptide/nitrate transporter At1g62200 OS=Arabidopsis thaliana GN=At1g62200 PE=2 SV=1 Back     alignment and function description
>sp|P46032|PTR2_ARATH Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LFB8|PTR5_ARATH Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1 Back     alignment and function description
>sp|Q9M390|PTR1_ARATH Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LYR6|PTR49_ARATH Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1 Back     alignment and function description
>sp|Q9FM20|PTR54_ARATH Probable peptide/nitrate transporter At5g62730 OS=Arabidopsis thaliana GN=At5g62730 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
225450417 736 PREDICTED: probable peptide/nitrate tran 0.960 0.497 0.673 1e-139
296089862 626 unnamed protein product [Vitis vinifera] 0.960 0.584 0.673 1e-139
357441977 606 Peptide transporter PTR1 [Medicago trunc 0.986 0.620 0.638 1e-138
356574054 618 PREDICTED: probable peptide/nitrate tran 0.952 0.587 0.656 1e-137
255543056 640 nitrate transporter, putative [Ricinus c 0.960 0.571 0.653 1e-137
356534943 604 PREDICTED: probable peptide/nitrate tran 0.952 0.600 0.646 1e-135
356505723 582 PREDICTED: nitrate transporter 1.2-like 0.986 0.646 0.620 1e-135
449454111 662 PREDICTED: probable peptide/nitrate tran 0.960 0.552 0.648 1e-135
449524440 618 PREDICTED: LOW QUALITY PROTEIN: probable 0.960 0.592 0.648 1e-135
357511669 585 Peptide transporter PTR1 [Medicago trunc 0.955 0.622 0.643 1e-134
>gi|225450417|ref|XP_002276071.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/367 (67%), Positives = 288/367 (78%), Gaps = 1/367 (0%)

Query: 1   MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND 60
           ++TIQAYS  LHP DCGK SC++G  A  FY SL LY+LG GG RG LPALGA QF++ D
Sbjct: 227 LMTIQAYSNKLHPADCGKPSCVEGGTAVMFYVSLCLYALGSGGVRGALPALGADQFNQKD 286

Query: 61  PKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 120
           P  A+ALAS+FN+ + + T+ A +GVT IV+V     W+ GF IS V   IG I LA+G+
Sbjct: 287 PNEAEALASFFNWVILSATVGASVGVTVIVWVSSTVTWYWGFFISLVTAFIGFIVLALGR 346

Query: 121 PFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFR 180
            FYRIQ  G+SP++R  QVIVVAIKNR LS P++P ELYEIN      T+ ++ HT+QFR
Sbjct: 347 RFYRIQPHGQSPIIRTVQVIVVAIKNRSLSPPESPGELYEINDQVTDFTDPKLAHTDQFR 406

Query: 181 CLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQG 240
           CLDKAAI+ KDS    PW VCTVTQVEEVKIL RM+PIL STIIMNTCLAQLQT SV QG
Sbjct: 407 CLDKAAILGKDS-EPRPWEVCTVTQVEEVKILTRMLPILFSTIIMNTCLAQLQTFSVHQG 465

Query: 241 AYMDPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGL 300
             MD  LGS +VP  SIP++PL+FM+ILIPIYEF+FVPFARKITGHPAGITQLQRVG+GL
Sbjct: 466 NEMDRFLGSFEVPASSIPIIPLVFMSILIPIYEFVFVPFARKITGHPAGITQLQRVGIGL 525

Query: 301 VLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEA 360
           VLS ISM +AG VEVKRRN   + PP++ISLFWLSFQY IFGIADMFT VGLLEFFYKEA
Sbjct: 526 VLSAISMAVAGLVEVKRRNEALEIPPRKISLFWLSFQYGIFGIADMFTLVGLLEFFYKEA 585

Query: 361 PAGMRTL 367
           P GMR+L
Sbjct: 586 PKGMRSL 592

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296089862|emb|CBI39681.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357441977|ref|XP_003591266.1| Peptide transporter PTR1 [Medicago truncatula] gi|355480314|gb|AES61517.1| Peptide transporter PTR1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356574054|ref|XP_003555167.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max] Back     alignment and taxonomy information
>gi|255543056|ref|XP_002512591.1| nitrate transporter, putative [Ricinus communis] gi|223548552|gb|EEF50043.1| nitrate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356534943|ref|XP_003536010.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max] Back     alignment and taxonomy information
>gi|356505723|ref|XP_003521639.1| PREDICTED: nitrate transporter 1.2-like [Glycine max] Back     alignment and taxonomy information
>gi|449454111|ref|XP_004144799.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449524440|ref|XP_004169231.1| PREDICTED: LOW QUALITY PROTEIN: probable peptide/nitrate transporter At1g59740-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|357511669|ref|XP_003626123.1| Peptide transporter PTR1 [Medicago truncatula] gi|87241322|gb|ABD33180.1| TGF-beta receptor, type I/II extracellular region [Medicago truncatula] gi|355501138|gb|AES82341.1| Peptide transporter PTR1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
TAIR|locus:2025886591 AT1G59740 [Arabidopsis thalian 0.958 0.617 0.411 3.3e-70
TAIR|locus:2196739585 NRT1:2 "AT1G69850" [Arabidopsi 0.543 0.353 0.434 3.3e-67
TAIR|locus:2205769567 AT1G27040 [Arabidopsis thalian 0.939 0.631 0.388 4.5e-66
TAIR|locus:2006907601 AT1G33440 [Arabidopsis thalian 0.942 0.597 0.382 6e-64
TAIR|locus:2018032590 PTR6 "peptide transporter 6" [ 0.955 0.616 0.393 6e-64
TAIR|locus:2150124570 PTR5 "peptide transporter 5" [ 0.947 0.633 0.371 1e-61
TAIR|locus:2181655624 AT5G13400 [Arabidopsis thalian 0.839 0.512 0.408 5.5e-61
TAIR|locus:2041125585 PTR2 "peptide transporter 2" [ 0.955 0.622 0.350 1.7e-59
TAIR|locus:2080235570 PTR1 "peptide transporter 1" [ 0.952 0.636 0.351 2.2e-59
TAIR|locus:2061843583 AT2G40460 [Arabidopsis thalian 0.939 0.614 0.375 1.4e-55
TAIR|locus:2025886 AT1G59740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 154/374 (41%), Positives = 227/374 (60%)

Query:     1 MLTIQAYSKSLHPPDCGK---SSC--LKGAIAAXXXXXXXXXXXXXXXNRGTLPALGAGQ 55
             +L++QA+   L PP C      +C   KG  A                 +  + A GA Q
Sbjct:   129 LLSVQAHLPQLKPPKCNPLIDQTCEEAKGFKAMIFFMALYLVALGSGCVKPNMIAHGADQ 188

Query:    56 FDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA 115
             F ++ PK +K L+SYFN   FA ++  +I +T +V+V    G  +GF +S+ A  +G+I+
Sbjct:   189 FSQSHPKQSKRLSSYFNAAYFAFSMGELIALTLLVWVQTHSGMDIGFGVSAAAMTMGIIS 248

Query:   116 LAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIER-VGTEERIP 174
             L  G  ++R ++P  S    +A VIV AI  RKL+ P +P  L+  + +   V     +P
Sbjct:   249 LVSGTMYFRNKRPRRSIFTPIAHVIVAAILKRKLASPSDPRMLHGDHHVANDVVPSSTLP 308

Query:   175 HTNQFRCLDKAAIVPKDS-TAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQ 233
             HT +FR LDKA I  +D+ T  +PWR+CTVTQVE+VK L  ++PI ASTI+ NT LAQLQ
Sbjct:   309 HTPRFRFLDKACIKIQDTNTKESPWRLCTVTQVEQVKTLISLVPIFASTIVFNTILAQLQ 368

Query:   234 TLSVTQGAYMDPRLG-SIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQ 292
             T SV QG+ M+ RL  S  +P  S+  +P + +  L+P+Y+   VPFARK+TGH +GI  
Sbjct:   369 TFSVQQGSSMNTRLSNSFHIPPASLQAIPYIMLIFLVPLYDSFLVPFARKLTGHNSGIPP 428

Query:   293 LQRVGVGLVLSVISMTIAGFVEVKRRNAFNQSPPKQISLFWLSFQYCIFGIADMFTFVGL 352
             L R+G+GL LS  SM  A  +E KRR++ +    + +S+FW++ Q+ IFGI++MFT VGL
Sbjct:   429 LTRIGIGLFLSTFSMVSAAMLEKKRRDS-SVLDGRILSIFWITPQFLIFGISEMFTAVGL 487

Query:   353 LEFFYKEAPAGMRT 366
             +EFFYK++  GM +
Sbjct:   488 IEFFYKQSAKGMES 501
GO:0005215 "transporter activity" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006857 "oligopeptide transport" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA;ISS
GO:0009624 "response to nematode" evidence=IEP;RCA
TAIR|locus:2196739 NRT1:2 "AT1G69850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205769 AT1G27040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006907 AT1G33440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018032 PTR6 "peptide transporter 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2150124 PTR5 "peptide transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2181655 AT5G13400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041125 PTR2 "peptide transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080235 PTR1 "peptide transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061843 AT2G40460 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
pfam00854372 pfam00854, PTR2, POT family 7e-48
TIGR00926 641 TIGR00926, 2A1704, Peptide:H+ symporter (also tran 6e-10
COG3104498 COG3104, PTR2, Dipeptide/tripeptide permease [Amin 1e-05
>gnl|CDD|216153 pfam00854, PTR2, POT family Back     alignment and domain information 
 Score =  166 bits (422), Expect = 7e-48
 Identities = 100/360 (27%), Positives = 152/360 (42%), Gaps = 29/360 (8%)

Query: 22  LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 81
           L     A FY  LYL +LG GG +  + A GA QFDE           +F+++ F+    
Sbjct: 27  LSPVQVALFYIGLYLIALGTGGIKPNVSAFGADQFDETQDP---RRDGFFSWFYFSINAG 83

Query: 82  AMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGES--PLVRVAQV 139
           ++I      Y+  + G+ LGF + +V  L+ L+   +G   Y+ + P       V +A +
Sbjct: 84  SLIATIITPYLQQNVGYPLGFGLPAVGMLLALLVFLLGSRRYKKKAPPGGSPFTVCIAFI 143

Query: 140 IVVAIKNRKLSLPDNPEELYE-INKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPW 198
           I  A KNRKL LP +   LY  + K  +    +   HT     +                
Sbjct: 144 ITAAGKNRKLQLPKDSHWLYWALEKYNKRSISQTKVHTR-VAVIFIPLPKFWALF----- 197

Query: 199 RVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGS-IKVPTPSI 257
                  V  ++ +  M+PI A  I+ +    QL TL V Q   MD  +    ++P  S 
Sbjct: 198 --DQQGSVWLLQAILLMLPIWAFWILPDQMWTQLATLIVRQVPTMDRIIYPLFEIPPASF 255

Query: 258 PVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKR 317
                L + IL+PI +FL  P  R       G+T  QR G+G+ + +++  +A  VE KR
Sbjct: 256 QSFNPLAVLILLPILDFLVYPLLR----LKRGLTLPQRFGLGMFILIVANFLAAIVEAKR 311

Query: 318 R---NAFNQ-SPPKQISLF--WLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHL 371
                A    SP   + LF  W   +  I G+       G LEF     P+ M +L   L
Sbjct: 312 PRYAAALGLTSPGWTVPLFILWSLPELFISGVG----LAGALEFAPDALPSSMMSLWTLL 367

The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters. Length = 372
>gnl|CDD|233190 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>gnl|CDD|225646 COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 381
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 100.0
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 100.0
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 100.0
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 100.0
PRK15462493 dipeptide/tripeptide permease D; Provisional 100.0
PRK10207489 dipeptide/tripeptide permease B; Provisional 100.0
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 100.0
PRK09584500 tppB putative tripeptide transporter permease; Rev 100.0
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 99.14
TIGR00900365 2A0121 H+ Antiporter protein. 98.81
TIGR00901356 2A0125 AmpG-related permease. 98.77
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.77
PRK11646400 multidrug resistance protein MdtH; Provisional 98.6
TIGR00893399 2A0114 d-galactonate transporter. 98.6
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.56
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.56
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.51
TIGR00895398 2A0115 benzoate transport. 98.46
PRK10489417 enterobactin exporter EntS; Provisional 98.46
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.41
TIGR00902382 2A0127 phenyl proprionate permease family protein. 98.4
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 98.36
PRK03545390 putative arabinose transporter; Provisional 98.36
PRK15402406 multidrug efflux system translocase MdfA; Provisio 98.31
PRK10504471 putative transporter; Provisional 98.3
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.28
PRK10054395 putative transporter; Provisional 98.27
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 98.25
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 98.25
PRK09874408 drug efflux system protein MdtG; Provisional 98.23
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 98.17
PRK05122399 major facilitator superfamily transporter; Provisi 98.16
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.13
PRK12382392 putative transporter; Provisional 98.11
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.11
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.08
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 98.05
TIGR00898505 2A0119 cation transport protein. 98.04
TIGR00891405 2A0112 putative sialic acid transporter. 98.04
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.02
PRK11652394 emrD multidrug resistance protein D; Provisional 98.0
PRK12307426 putative sialic acid transporter; Provisional 97.99
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 97.97
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 97.96
PRK10213394 nepI ribonucleoside transporter; Reviewed 97.94
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 97.87
KOG1330493 consensus Sugar transporter/spinster transmembrane 97.86
TIGR00892455 2A0113 monocarboxylate transporter 1. 97.84
PRK15011393 sugar efflux transporter B; Provisional 97.78
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 97.75
PRK11010491 ampG muropeptide transporter; Validated 97.75
PRK11043401 putative transporter; Provisional 97.73
PF13347428 MFS_2: MFS/sugar transport protein 97.72
PRK15403413 multidrug efflux system protein MdtM; Provisional 97.66
PRK11663434 regulatory protein UhpC; Provisional 97.63
PRK10473392 multidrug efflux system protein MdtL; Provisional 97.62
PRK11195393 lysophospholipid transporter LplT; Provisional 97.6
PRK10077479 xylE D-xylose transporter XylE; Provisional 97.6
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 97.56
PRK03633381 putative MFS family transporter protein; Provision 97.54
PRK10406432 alpha-ketoglutarate transporter; Provisional 97.53
PRK09528420 lacY galactoside permease; Reviewed 97.52
PRK09848448 glucuronide transporter; Provisional 97.51
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 97.46
TIGR00896355 CynX cyanate transporter. This family of proteins 97.44
PRK11902402 ampG muropeptide transporter; Reviewed 97.44
PRK10091382 MFS transport protein AraJ; Provisional 97.42
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 97.42
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 97.42
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 97.42
PRK03699394 putative transporter; Provisional 97.41
PRK03893496 putative sialic acid transporter; Provisional 97.4
PRK10642490 proline/glycine betaine transporter; Provisional 97.38
TIGR01272310 gluP glucose/galactose transporter. Disruption of 97.37
PRK09705393 cynX putative cyanate transporter; Provisional 97.33
TIGR00788468 fbt folate/biopterin transporter. The only functio 97.32
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 97.29
PRK09669444 putative symporter YagG; Provisional 97.26
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 97.18
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 97.16
PRK09952438 shikimate transporter; Provisional 97.14
TIGR00897402 2A0118 polyol permease family. This family of prot 97.08
PRK10429473 melibiose:sodium symporter; Provisional 97.0
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 96.99
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 96.92
PRK05122399 major facilitator superfamily transporter; Provisi 96.89
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 96.84
TIGR00880141 2_A_01_02 Multidrug resistance protein. 96.83
TIGR00805633 oat sodium-independent organic anion transporter. 96.75
PRK15075434 citrate-proton symporter; Provisional 96.69
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 96.45
PRK10133438 L-fucose transporter; Provisional 96.23
TIGR00889418 2A0110 nucleoside transporter. This family of prot 96.19
PRK09874408 drug efflux system protein MdtG; Provisional 96.17
PRK12382392 putative transporter; Provisional 96.12
KOG2532466 consensus Permease of the major facilitator superf 96.03
PLN00028476 nitrate transmembrane transporter; Provisional 95.9
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 95.79
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 95.75
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 95.74
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 95.59
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 95.36
TIGR00893399 2A0114 d-galactonate transporter. 95.13
PRK03545 390 putative arabinose transporter; Provisional 95.01
TIGR00892455 2A0113 monocarboxylate transporter 1. 94.99
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 94.96
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 94.94
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 94.93
TIGR00889418 2A0110 nucleoside transporter. This family of prot 94.89
PRK03633381 putative MFS family transporter protein; Provision 94.81
PRK11462460 putative transporter; Provisional 94.8
PRK10489417 enterobactin exporter EntS; Provisional 94.66
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 94.36
KOG3764464 consensus Vesicular amine transporter [Intracellul 94.31
TIGR00891 405 2A0112 putative sialic acid transporter. 94.26
KOG1330 493 consensus Sugar transporter/spinster transmembrane 93.96
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 93.91
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 93.71
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 93.52
PRK12307 426 putative sialic acid transporter; Provisional 93.4
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 93.31
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 93.27
PRK09705393 cynX putative cyanate transporter; Provisional 93.22
TIGR00880141 2_A_01_02 Multidrug resistance protein. 93.16
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 92.97
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 92.88
PRK11646 400 multidrug resistance protein MdtH; Provisional 92.7
PRK11663 434 regulatory protein UhpC; Provisional 92.58
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 92.39
PRK10213 394 nepI ribonucleoside transporter; Reviewed 92.31
PRK09528420 lacY galactoside permease; Reviewed 92.31
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 92.16
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 91.94
PRK10091 382 MFS transport protein AraJ; Provisional 91.88
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 91.85
PRK15011393 sugar efflux transporter B; Provisional 91.54
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 91.42
PRK14995 495 methyl viologen resistance protein SmvA; Provision 91.18
TIGR00895 398 2A0115 benzoate transport. 91.03
TIGR00900 365 2A0121 H+ Antiporter protein. 91.02
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 90.73
PRK10133 438 L-fucose transporter; Provisional 90.72
PRK03893 496 putative sialic acid transporter; Provisional 90.63
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 90.63
PRK11010 491 ampG muropeptide transporter; Validated 90.47
PRK10054 395 putative transporter; Provisional 90.43
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 90.35
KOG3626 735 consensus Organic anion transporter [Secondary met 89.98
COG2211467 MelB Na+/melibiose symporter and related transport 89.69
COG2807395 CynX Cyanate permease [Inorganic ion transport and 89.68
PRK10077 479 xylE D-xylose transporter XylE; Provisional 89.34
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 89.18
PRK10504 471 putative transporter; Provisional 89.12
PRK03699 394 putative transporter; Provisional 89.0
KOG3764 464 consensus Vesicular amine transporter [Intracellul 89.0
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 88.66
KOG2615451 consensus Permease of the major facilitator superf 88.53
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 88.47
PRK09669444 putative symporter YagG; Provisional 88.36
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 88.33
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 88.1
KOG2533495 consensus Permease of the major facilitator superf 88.01
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 87.65
PRK10473 392 multidrug efflux system protein MdtL; Provisional 86.98
TIGR00897402 2A0118 polyol permease family. This family of prot 85.74
PRK15403 413 multidrug efflux system protein MdtM; Provisional 85.59
PRK11902 402 ampG muropeptide transporter; Reviewed 85.4
PRK10642 490 proline/glycine betaine transporter; Provisional 85.21
TIGR00898 505 2A0119 cation transport protein. 85.1
TIGR00901 356 2A0125 AmpG-related permease. 84.97
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 84.96
TIGR00805 633 oat sodium-independent organic anion transporter. 84.8
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 84.79
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 84.71
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 83.68
PRK09952438 shikimate transporter; Provisional 83.65
PRK10406 432 alpha-ketoglutarate transporter; Provisional 83.57
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 83.44
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 83.03
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 82.94
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 81.25
TIGR00902382 2A0127 phenyl proprionate permease family protein. 81.23
KOG2533 495 consensus Permease of the major facilitator superf 81.05
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 80.49
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 80.11
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.8e-73  Score=580.29  Aligned_cols=374  Identities=43%  Similarity=0.717  Sum_probs=342.5

Q ss_pred             EEEEeecCCCCCCCC----CCCCCcc--cchhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHH
Q 016875            2 LTIQAYSKSLHPPDC----GKSSCLK--GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL   75 (381)
Q Consensus         2 l~~~~~~~~l~p~~c----~~~~c~~--~~~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY   75 (381)
                      ||+++.+|+|+|++|    +++.|.+  +.+...+|.+|.++++|+|+.|||+.++++||||+.++++++.+.++|+|||
T Consensus       121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y  200 (571)
T KOG1237|consen  121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY  200 (571)
T ss_pred             HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence            678999999999997    3336887  6799999999999999999999999999999999999988888999999999


Q ss_pred             HHHHHHHHHHhhhheeEeecccchhHHHHHHHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCc
Q 016875           76 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNP  155 (381)
Q Consensus        76 ~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~  155 (381)
                      +.+|+|++++.++..|+|++.||.+||+++++.|++++++|+.|++.|++++|.|+|++++.+|++++.++++...+.++
T Consensus       201 f~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~  280 (571)
T KOG1237|consen  201 FSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFKRKAVVSLDP  280 (571)
T ss_pred             HHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHHHhccCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988877664


Q ss_pred             chhhhhhhhcccCCccccCCCCccchhhhhccCCCCC----CCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhh
Q 016875          156 EELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDS----TAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQ  231 (381)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~~~~~~~----~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q  231 (381)
                      +.. +.    .........+++.++++|+|+.+...+    ...+||++|+++||||+|.++|++|+|...++||+++.|
T Consensus       281 ~~~-~~----~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq  355 (571)
T KOG1237|consen  281 EEL-YY----DCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQ  355 (571)
T ss_pred             hhc-cc----cccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHHHHHHHHHHh
Confidence            333 11    111123345678899999999876542    245789999999999999999999999999999999999


Q ss_pred             hhhhHHHHhhccCCCcCC-ccccCCcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHH
Q 016875          232 LQTLSVTQGAYMDPRLGS-IKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIA  310 (381)
Q Consensus       232 ~~t~~~~qa~~~d~~i~g-~~ip~~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~  310 (381)
                      +.|.+++|+.+|||++++ +++|+++++.+..+.+++++|+||++++|+.||.+++|+++++++|||+|++++.++|.++
T Consensus       356 ~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~~~si~sm~~a  435 (571)
T KOG1237|consen  356 MVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGLVLSILSMAVA  435 (571)
T ss_pred             hhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccchHHHHHHHHH
Confidence            999999999999999997 9999999999999999999999999999999999998888999999999999999999999


Q ss_pred             HHHHHHHhhhccC--CCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875          311 GFVEVKRRNAFNQ--SPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT  380 (381)
Q Consensus       311 ~~~e~~~~~~~~~--~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~  380 (381)
                      +++|.+|++.+.+  +..++||++||+|||+|+|++|+|.+++++||+|+|+|++|||+++++|+++.|+||
T Consensus       436 a~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~  507 (571)
T KOG1237|consen  436 GIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGN  507 (571)
T ss_pred             HHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999988764  122689999999999999999999999999999999999999999999999999997

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
2xut_A524 Proton/peptide symporter family protein; transport 2e-68
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 2e-04
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Length = 524 Back     alignment and structure
 Score =  223 bits (570), Expect = 2e-68
 Identities = 60/355 (16%), Positives = 122/355 (34%), Gaps = 22/355 (6%)

Query: 27  AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV 86
              FY  L+L +LG GG +  + +    QFD+++          F+ + F     +    
Sbjct: 109 VQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKS---LAQKAFDMFYFTINFGSFFAS 165

Query: 87  TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 146
            ++  +  + G  + F I  V   +  +   +G+  Y    P          VI  A+  
Sbjct: 166 LSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLT 225

Query: 147 RKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIV-------PKDSTAAAPWR 199
           +     +    L  I  +        IP       L  A ++                 +
Sbjct: 226 KVEGKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARK 285

Query: 200 VCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYMDPRLGSIKVPTPSIPV 259
                 V+ V+ + R++ + A      +   Q  +  + Q   M             +  
Sbjct: 286 SHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMV---KPQWFEPAMMQA 342

Query: 260 LPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRN 319
           L  L + +LIP   F+  P   ++       T L+++G G+ ++ +S  + G +++    
Sbjct: 343 LNPLLVMLLIPFNNFVLYPAIERMGVKL---TALRKMGAGIAITGLSWIVVGTIQLMMDG 399

Query: 320 AFNQSPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFC 374
                    +S+FW    Y +    ++      LEF Y +AP  M+  ++     
Sbjct: 400 GS------ALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTL 448
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Length = 491 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
2xut_A524 Proton/peptide symporter family protein; transport 99.78
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.64
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 98.49
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 98.23
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 98.14
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 96.37
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 95.64
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 95.53
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 94.9
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 93.47
2cfq_A417 Lactose permease; transport, transport mechanism, 92.93
2xut_A524 Proton/peptide symporter family protein; transport 92.78
2cfq_A417 Lactose permease; transport, transport mechanism, 92.24
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
Probab=99.78  E-value=3.6e-20  Score=187.13  Aligned_cols=325  Identities=18%  Similarity=0.299  Sum_probs=211.5

Q ss_pred             hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeecccchhHHHHH
Q 016875           26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLIS  105 (381)
Q Consensus        26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~~g~~~~F~i~  105 (381)
                      +.+.++++..+..+|.|+..|+..++++|.+++++.   .+..+.|++++.+.|+|..+++.+.+++.++.||++.|.+.
T Consensus       108 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r---~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~  184 (524)
T 2xut_A          108 SVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNK---SLAQKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIP  184 (524)
T ss_dssp             CHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTT---THHHHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhccccchhHHHHHHHHcCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence            467788888999999999999999999999986542   23577899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccceeecCCCCCchhhHHHHHHHHHHhccccCCCCcchhhhhhhhcccCCccccCCCCc-------
Q 016875          106 SVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQ-------  178 (381)
Q Consensus       106 ~i~m~~~l~~f~~g~~~y~~~~p~g~pl~~~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  178 (381)
                      ++..+++.+.++..++.+++++|++++..+..+.+..+.++++.+.+ +.....+.... .. ......+.+.       
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~  261 (524)
T 2xut_A          185 GVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVEGKG-NIGLVLALIGG-VS-AAYALVNIPTLGIVAGL  261 (524)
T ss_dssp             HHHHHHHHHHHHSSSSSCCCCC--------------------CTTHH-HHHHHHHHHHH-HH-HHHTGGGTTTTCSSHHH
T ss_pred             HHHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHhhhhcccC-ccchhhhhhhh-hh-hhhhhcccchhhhhhhh
Confidence            98888888877766665554445444433333333333333221000 00000000000 00 0000000000       


Q ss_pred             -------------cch--hhhhccCCCCCCCCCCcccccchhhHHHHHHhhhhhHHHHHHHHHHhhhhhhhhHHHHhhcc
Q 016875          179 -------------FRC--LDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSVTQGAYM  243 (381)
Q Consensus       179 -------------~~~--L~~a~~~~~~~~~~~~~~~~~~~~vee~k~~~~~l~l~~~~~~f~~~~~Q~~t~~~~qa~~~  243 (381)
                                   ..|  +|+++.            .+++.+++++|+.++..+++.....++..+.|..+.+..|+.++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (524)
T 2xut_A          262 CCAMVLVMGFVGAGASLQLERARK------------SHPDAAVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDM  329 (524)
T ss_dssp             HHHHHHHHHHHHTGGGTHHHHSCC------------SCCSSSSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHS
T ss_pred             hhhhhhhhcccccchhhHHhhhhc------------cccHhHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhc
Confidence                         012  222211            12223456677788888888888889999999888888887777


Q ss_pred             CCCcCCccccCCcccccchHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcchhhhhHHHHHHHHHHHHHHHHHHhhhccC
Q 016875          244 DPRLGSIKVPTPSIPVLPLLFMAILIPIYEFLFVPFARKITGHPAGITQLQRVGVGLVLSVISMTIAGFVEVKRRNAFNQ  323 (381)
Q Consensus       244 d~~i~g~~ip~~~~~~~~~~~ii~~~p~~~~~~~p~~~k~~~~~~~~s~l~ki~iG~~l~~ls~~~~~~~e~~~~~~~~~  323 (381)
                      |.+.  + ++...+..++.+..++..|+.+++..|..+|+++   ++++.+++.+|+++.+++++..+..+..+    ..
T Consensus       330 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~  399 (524)
T 2xut_A          330 VKPQ--W-FEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGV---KLTALRKMGAGIAITGLSWIVVGTIQLMM----DG  399 (524)
T ss_dssp             CCCS--S-SCHHHHHTTSGGGHHHHGGGTTTC---------------CCHHHHHTHHHHHHHHHHTTTTTTTTT----TT
T ss_pred             CCCe--e-ecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHh----cC
Confidence            6553  2 4667788888889999999999988787777643   35677788999999998887765543111    11


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHhhhhhHHHHHhhcCchhHHHHHHHHHHHhhccC
Q 016875          324 SPPKQISLFWLSFQYCIFGIADMFTFVGLLEFFYKEAPAGMRTLLLHLHFCHCHLAT  380 (381)
Q Consensus       324 ~g~~~~s~~wlv~~y~l~~~~E~~~~~~glef~~~~aP~~m~s~~~g~~~l~~a~G~  380 (381)
                      +  ...+.+|+++.+++.++++.+..+...+++.+.+|+++||.++|++.+...+|+
T Consensus       400 ~--~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~  454 (524)
T 2xut_A          400 G--SALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAMKGTIMSFWTLSVTVGN  454 (524)
T ss_dssp             T--CCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTCCTTTHHHHGGGHHHHH
T ss_pred             C--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHhHHHHHHHHHHHHHH
Confidence            1  246789999999999999999999999999999999999999999988877664
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 98.11
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 97.02
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 96.27
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 95.58
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=98.11  E-value=4.6e-06  Score=78.38  Aligned_cols=84  Identities=8%  Similarity=0.066  Sum_probs=64.9

Q ss_pred             hhHHHHHHHHHHHhcccccccccccccccCCCCCCchhhhhhhhHHHHHHHHHHHHHHHHhhhheeEeec-ccchhHHHH
Q 016875           26 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLI  104 (381)
Q Consensus        26 ~~~~~~~~L~lia~G~G~~k~nv~~~~~dq~~~~~~~~~~~~~~~f~~fY~~iNiGa~~a~~~~~~i~~~-~g~~~~F~i  104 (381)
                      ....++++..+..+|.|..-+...++++|.++++      +|...+.++..+.++|..+++.+.+++.+. .+|++.|.+
T Consensus       115 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~  188 (447)
T d1pw4a_         115 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQK------ERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYM  188 (447)
T ss_dssp             SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTT------HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHH
T ss_pred             hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhh------cccccccccccccchhhhhhhhhhhhHhhhhhcccccchh
Confidence            3456777778888888999999999999988753      277889999999999999998877765554 589999888


Q ss_pred             HHHHHHHHHHH
Q 016875          105 SSVATLIGLIA  115 (381)
Q Consensus       105 ~~i~m~~~l~~  115 (381)
                      .++..++..++
T Consensus       189 ~~~~~~~~~~~  199 (447)
T d1pw4a_         189 PAFCAILVALF  199 (447)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhhHHHHHHH
Confidence            76655444433
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure