Citrus Sinensis ID: 016962

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MYFSKAKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHSTCI
cccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEEEcHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHcccccccccccHHHHHcccccc
ccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccEccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccHcEEcEEEEcccccccccccccEEEcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcEEEEEEcccccHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEEEEEEcccccccEEEEccccccccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHccccc
MYFSKAKLKLFILFFVTSSSNLLIISINcqddhilslpRRQVALFIFGDSLFDAGINNYINTTtdyqanfwpygesffdyptgrfsdgrliPDFIAEyaelpfiptflpyhnhdqftygvnfasggagalveTHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFgvggndyfnlftsnssdlhfskKEFVGMVIGNLTNTIKEIYKRGgrkfafanlcplgclpamkvlfpgstspcveDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSisqrfnnpskygfkevtaccgsgpygglsscggkraikeyelcdnpneylffdsshssEKAYKQIAELMwngtpdvtgpynlkmlfehstci
MYFSKAKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHSTCI
MYFSKAKLKLFILFFVTsssnlliisinCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKAlsellqelegelKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHSTCI
****KAKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSH**EKAYKQIAELMWNGTPDVTGPYNLKMLFE*****
**********FILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQ*LGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHS***
MYFSKAKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHSTCI
**FSKAKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHSTC*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MYFSKAKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHxxxxxxxxxxxxxxxxxxxxxYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEHSTCI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query379 2.2.26 [Sep-21-2011]
Q9FLN0374 GDSL esterase/lipase 1 OS yes no 0.960 0.973 0.529 1e-106
Q9SYF0376 GDSL esterase/lipase 2 OS no no 0.957 0.965 0.523 1e-106
Q9SSA7385 GDSL esterase/lipase 5 OS no no 0.970 0.955 0.505 1e-102
Q9SYF5367 GDSL esterase/lipase 3 OS no no 0.944 0.975 0.512 1e-100
Q9LJP1377 GDSL esterase/lipase 4 OS no no 0.923 0.928 0.508 6e-99
Q7XA74417 GDSL esterase/lipase At1g no no 0.810 0.736 0.382 2e-54
P86276343 GDSL esterase/lipase OS=C N/A no 0.825 0.912 0.387 2e-53
Q9C996362 GDSL esterase/lipase 6 OS no no 0.833 0.872 0.356 5e-53
O80470387 GDSL esterase/lipase At2g no no 0.841 0.824 0.339 2e-43
Q9FJ40375 GDSL esterase/lipase At5g no no 0.807 0.816 0.367 3e-43
>sp|Q9FLN0|GLIP1_ARATH GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1 Back     alignment and function desciption
 Score =  385 bits (988), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/370 (52%), Positives = 257/370 (69%), Gaps = 6/370 (1%)

Query: 9   KLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQA 68
           +L  + F+  +  + I SINC D++  +L   Q ALF+FGDS+FDAG NNYI+T +  ++
Sbjct: 5   QLVSITFLAYTIIISIGSINCIDNN--NLVTNQSALFVFGDSVFDAGNNNYIDTLSSVRS 62

Query: 69  NFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFL-PYHNHDQFTYGVNFASGGA 127
           N+WPYG++ F  PTGR SDGRLIPDFIAEYA LP IP  L P++ + QF YGVNFASGGA
Sbjct: 63  NYWPYGQTTFKSPTGRVSDGRLIPDFIAEYAWLPLIPPNLQPFNGNSQFAYGVNFASGGA 122

Query: 128 GALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFT 187
           GALV T  G VI+L TQL+ FK VE++L+ KLGD E + ++S AVYLF +G NDY   FT
Sbjct: 123 GALVGTFSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFT 182

Query: 188 SNSSDLH-FSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTS 246
           +NSS     S +++V  V+GN+T+  KE+Y  GGRKF   N  P  C PA  V+      
Sbjct: 183 TNSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDCAPASLVIDQTKIR 242

Query: 247 PCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKE-VTA 305
            C +   E + +HN+ L   L+ L  EL GFKYA HD+ TS+S+R N+PSKYGFKE   A
Sbjct: 243 SCFQPVTELINMHNEKLLNGLRRLNHELSGFKYALHDYHTSLSERMNDPSKYGFKEGKKA 302

Query: 306 CCGSGPYGGLSSCGGKRAIKE-YELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVT 364
           CCGSGP  G+++CGG+  + + YELC+N  +YLFFD  H +EKA +QIAEL+W+G  ++T
Sbjct: 303 CCGSGPLRGINTCGGRMGLSQSYELCENVTDYLFFDPFHLTEKANRQIAELIWSGPTNIT 362

Query: 365 GPYNLKMLFE 374
           GPYNLK LFE
Sbjct: 363 GPYNLKALFE 372
Confers resistance to the necrotrophic fungus Alternaria brassicicola. Possesses lipase and antimicrobial activities that directly disrupt fungal spore integrity. Triggers systemic resistance, mostly by the ethylene-dependent pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9SYF0|GLIP2_ARATH GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SSA7|GLIP5_ARATH GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2 Back     alignment and function description
>sp|Q9SYF5|GLIP3_ARATH GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2 Back     alignment and function description
>sp|Q9LJP1|GRIP4_ARATH GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2 Back     alignment and function description
>sp|Q7XA74|GDL21_ARATH GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1 Back     alignment and function description
>sp|P86276|GDL1_CARPA GDSL esterase/lipase OS=Carica papaya PE=1 SV=1 Back     alignment and function description
>sp|Q9C996|GLIP6_ARATH GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1 Back     alignment and function description
>sp|O80470|GDL38_ARATH GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJ40|GDL86_ARATH GDSL esterase/lipase At5g45960 OS=Arabidopsis thaliana GN=At5g45960 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
225442005369 PREDICTED: GDSL esterase/lipase 1 [Vitis 0.883 0.907 0.646 1e-123
225442009394 PREDICTED: GDSL esterase/lipase 1 [Vitis 0.934 0.898 0.610 1e-119
255585076365 zinc finger protein, putative [Ricinus c 0.952 0.989 0.574 1e-116
255585074368 zinc finger protein, putative [Ricinus c 0.878 0.904 0.634 1e-115
224074087369 predicted protein [Populus trichocarpa] 0.944 0.970 0.571 1e-115
359482451365 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.886 0.920 0.607 1e-114
224074089370 predicted protein [Populus trichocarpa] 0.912 0.935 0.584 1e-114
297742940392 unnamed protein product [Vitis vinifera] 0.868 0.839 0.613 1e-113
359482940368 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.920 0.948 0.581 1e-113
225442003377 PREDICTED: GDSL esterase/lipase 5 [Vitis 0.868 0.872 0.613 1e-113
>gi|225442005|ref|XP_002271704.1| PREDICTED: GDSL esterase/lipase 1 [Vitis vinifera] gi|297742942|emb|CBI35809.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 219/339 (64%), Positives = 270/339 (79%), Gaps = 4/339 (1%)

Query: 38  PRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAE 97
           P +  ALFIFGDS+FDAG N YINTTTDYQ NFWPYGE+FFDYPTGR SDGRLIPDFIAE
Sbjct: 31  PEKHAALFIFGDSIFDAGNNIYINTTTDYQRNFWPYGETFFDYPTGRASDGRLIPDFIAE 90

Query: 98  YAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGFVIDLETQLSYFKIVEKLLKQ 157
           YA+LPF+P +L   N +QFTYG NFASGGAGAL +T+QG V++L TQL+YFK VEKLL+Q
Sbjct: 91  YAKLPFLPPYLQPGN-NQFTYGSNFASGGAGALDQTNQGLVVNLNTQLTYFKDVEKLLRQ 149

Query: 158 KLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLH-FSKKEFVGMVIGNLTNTIKEIY 216
           KLGDE A+ +L EAVYL  +G NDY + F  NS+ L  +S +++V MVIGNLT  IKEIY
Sbjct: 150 KLGDEAAKKMLFEAVYLINIGSNDYLSPFLWNSTVLQSYSHEQYVHMVIGNLTVVIKEIY 209

Query: 217 KRGGRKFAFANLCPLGCLPAMK-VLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELK 275
           K+GGRKF   ++ PLGC+P MK +        C+E++ E  +LHN ALS++LQELE +LK
Sbjct: 210 KKGGRKFGLLDVGPLGCVPIMKEIKLQQGGMGCIEESTELAKLHNIALSKVLQELESKLK 269

Query: 276 GFKYAYHDFFTSISQRFNNPSKYGFKE-VTACCGSGPYGGLSSCGGKRAIKEYELCDNPN 334
           GFKY+  +F+T + +R NNPSKYGFKE   ACCGSGP+ GLSSCGGK +IKEYELC N +
Sbjct: 270 GFKYSISNFYTFLEERMNNPSKYGFKEGKIACCGSGPFRGLSSCGGKSSIKEYELCSNVS 329

Query: 335 EYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLF 373
           EY+FFDS H +++AY+QIAEL+W+GT ++TGPYNLK LF
Sbjct: 330 EYVFFDSVHPTDRAYQQIAELIWSGTRNITGPYNLKALF 368

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225442009|ref|XP_002271802.1| PREDICTED: GDSL esterase/lipase 1 [Vitis vinifera] gi|297742945|emb|CBI35812.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255585076|ref|XP_002533245.1| zinc finger protein, putative [Ricinus communis] gi|223526943|gb|EEF29146.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255585074|ref|XP_002533244.1| zinc finger protein, putative [Ricinus communis] gi|223526942|gb|EEF29145.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224074087|ref|XP_002304246.1| predicted protein [Populus trichocarpa] gi|222841678|gb|EEE79225.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359482451|ref|XP_003632776.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224074089|ref|XP_002304247.1| predicted protein [Populus trichocarpa] gi|222841679|gb|EEE79226.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297742940|emb|CBI35807.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482940|ref|XP_003632862.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442003|ref|XP_002271631.1| PREDICTED: GDSL esterase/lipase 5 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
TAIR|locus:2163021374 GLIP1 "AT5G40990" [Arabidopsis 0.960 0.973 0.505 2.2e-96
TAIR|locus:2197014385 GLIP5 "AT1G53920" [Arabidopsis 0.970 0.955 0.494 5.5e-93
TAIR|locus:2014450367 GLIP3 "AT1G53990" [Arabidopsis 0.944 0.975 0.493 2.5e-90
TAIR|locus:2090785377 GLIP4 "AT3G14225" [Arabidopsis 0.944 0.949 0.478 2.8e-89
TAIR|locus:2026286362 GLIP6 "AT1G71120" [Arabidopsis 0.836 0.875 0.363 1.1e-53
TAIR|locus:2014385417 MVP1 "AT1G54030" [Arabidopsis 0.810 0.736 0.372 2.5e-49
TAIR|locus:2152435375 AT5G45960 "AT5G45960" [Arabido 0.807 0.816 0.361 7.3e-43
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.841 0.876 0.326 6.6e-42
TAIR|locus:2151744356 AT5G37690 [Arabidopsis thalian 0.825 0.879 0.319 1.6e-40
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.852 0.834 0.319 2e-40
TAIR|locus:2163021 GLIP1 "AT5G40990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 187/370 (50%), Positives = 245/370 (66%)

Query:     9 KLFILFFVTXXXXXXXXXXXCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQA 68
             +L  + F+            C D++  +L   Q ALF+FGDS+FDAG NNYI+T +  ++
Sbjct:     5 QLVSITFLAYTIIISIGSINCIDNN--NLVTNQSALFVFGDSVFDAGNNNYIDTLSSVRS 62

Query:    69 NFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELPFIPTFL-PYHNHDQFTYGVNFASGGA 127
             N+WPYG++ F  PTGR SDGRLIPDFIAEYA LP IP  L P++ + QF YGVNFASGGA
Sbjct:    63 NYWPYGQTTFKSPTGRVSDGRLIPDFIAEYAWLPLIPPNLQPFNGNSQFAYGVNFASGGA 122

Query:   128 GALVETHQGFVIDLETQLSYFKIVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDYFNLFT 187
             GALV T  G VI+L TQL+ FK VE++L+ KLGD E + ++S AVYLF +G NDY   FT
Sbjct:   123 GALVGTFSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFT 182

Query:   188 SNSSDLH-FSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTS 246
             +NSS     S +++V  V+GN+T+  KE+Y  GGRKF   N  P  C PA  V+      
Sbjct:   183 TNSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDCAPASLVIDQTKIR 242

Query:   247 PCVEDAQEFVQLHNKAXXXXXXXXXXXXKGFKYAYHDFFTSISQRFNNPSKYGFKE-VTA 305
              C +   E + +HN+              GFKYA HD+ TS+S+R N+PSKYGFKE   A
Sbjct:   243 SCFQPVTELINMHNEKLLNGLRRLNHELSGFKYALHDYHTSLSERMNDPSKYGFKEGKKA 302

Query:   306 CCGSGPYGGLSSCGGKRAIKE-YELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVT 364
             CCGSGP  G+++CGG+  + + YELC+N  +YLFFD  H +EKA +QIAEL+W+G  ++T
Sbjct:   303 CCGSGPLRGINTCGGRMGLSQSYELCENVTDYLFFDPFHLTEKANRQIAELIWSGPTNIT 362

Query:   365 GPYNLKMLFE 374
             GPYNLK LFE
Sbjct:   363 GPYNLKALFE 372
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016298 "lipase activity" evidence=IEA;ISS;IDA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
GO:0005615 "extracellular space" evidence=IDA
GO:0009620 "response to fungus" evidence=IMP
GO:0009627 "systemic acquired resistance" evidence=IMP
GO:0009751 "response to salicylic acid stimulus" evidence=IEP
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IMP
GO:0009866 "induced systemic resistance, ethylene mediated signaling pathway" evidence=IMP
GO:0009871 "jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
TAIR|locus:2197014 GLIP5 "AT1G53920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014450 GLIP3 "AT1G53990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090785 GLIP4 "AT3G14225" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026286 GLIP6 "AT1G71120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014385 MVP1 "AT1G54030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152435 AT5G45960 "AT5G45960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151744 AT5G37690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FLN0GLIP1_ARATH3, ., 1, ., 1, ., -0.52970.96040.9732yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.10.691
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 1e-121
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 8e-55
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 8e-40
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 5e-14
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 4e-08
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 1e-07
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  353 bits (909), Expect = e-121
 Identities = 134/320 (41%), Positives = 187/320 (58%), Gaps = 10/320 (3%)

Query: 43  ALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDYPTGRFSDGRLIPDFIAEYAELP 102
           ALF+FGDSL D G NNY+ T    +ANF PYG  F   PTGRFS+GRLI DFIAE   LP
Sbjct: 2   ALFVFGDSLVDTGNNNYLPT--LAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLP 59

Query: 103 F-IPTFLPYHNHDQFTYGVNFASGGAGALVETHQ-GFVIDLETQLSYFKIVEKLLKQKLG 160
              P +L  +    F  GVNFASGGAG L  T   G VI L  QL YFK  ++ L+  +G
Sbjct: 60  LLPPPYLSPNGSSDFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVG 119

Query: 161 DEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGG 220
           +E A  +LS++++L  +G NDY N + +N +   +  + +V  ++ N+++ IK +Y  G 
Sbjct: 120 EEAAADILSKSLFLISIGSNDYLNNYFANPTRQ-YEVEAYVPFLVSNISSAIKRLYDLGA 178

Query: 221 RKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYA 280
           RKF    L PLGCLP+ + LF G    C+E+  E  +L N  L +LL EL  EL G K+ 
Sbjct: 179 RKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFV 238

Query: 281 YHDFFTSISQRFNNPSKYGFKEVT-ACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFF 339
           Y D + ++     NP+KYGF+    ACCG+G   G   C          +C +P++Y+F+
Sbjct: 239 YADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNP----CGSTVCPDPSKYVFW 294

Query: 340 DSSHSSEKAYKQIAELMWNG 359
           D  H +E A + IA+ + +G
Sbjct: 295 DGVHPTEAANRIIADALLSG 314

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.94
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.41
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.39
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.38
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.36
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.35
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.34
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.3
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.3
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.3
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.26
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.26
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.24
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.21
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.21
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.17
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.17
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.14
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.13
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.03
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 98.89
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 98.88
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 98.88
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 98.84
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 98.79
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 98.72
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 98.67
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.59
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.41
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 98.34
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.31
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.3
KOG3670397 consensus Phospholipase [Lipid transport and metab 97.94
COG2845354 Uncharacterized protein conserved in bacteria [Fun 96.05
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 93.38
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 91.06
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.1e-77  Score=581.86  Aligned_cols=339  Identities=35%  Similarity=0.631  Sum_probs=289.4

Q ss_pred             hhhHHHHHHHHHHHhhhhhhhhcccccccccCCCCCcEEEEcCCccccCCCCCCccccccccCCCCCCCCCCC-CCCCcC
Q 016962            6 AKLKLFILFFVTSSSNLLIISINCQDDHILSLPRRQVALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFF-DYPTGR   84 (379)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~t~~~~~~~~~Pyg~~~~-~~ptgR   84 (379)
                      |.|.+|+.+||+++..+...+..+.         ++++|||||||++|+||++++.+..  +++.||||++|+ ++||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~aifvFGDSl~D~GN~~~l~~~~--~~~~~pyG~~f~~~~ptGR   69 (351)
T PLN03156          1 MQMHLFLIFFLLLAQLLVLVAETCA---------KVPAIIVFGDSSVDAGNNNQISTVA--KSNFEPYGRDFPGGRPTGR   69 (351)
T ss_pred             CCcchhhHHHHHHHHHHHHHhcccC---------CCCEEEEecCcCccCCCcccccccc--ccCCCCCCCCCCCCCCCcc
Confidence            6778888888888887755444332         3899999999999999998876543  678999999997 479999


Q ss_pred             CCCCCcHHHHHHhhcCC-CCCCCCCCCC-CCCCCCCcceeeeecCcccccCCc-cccccHHHHHHHHHHHHHHHHHhhCc
Q 016962           85 FSDGRLIPDFIAEYAEL-PFIPTFLPYH-NHDQFTYGVNFASGGAGALVETHQ-GFVIDLETQLSYFKIVEKLLKQKLGD  161 (379)
Q Consensus        85 fSnG~~~~d~la~~lg~-~~~~~~l~~~-~~~~~~~G~NfA~gGA~~~~~~~~-~~~~~l~~Qi~~f~~~~~~l~~~~G~  161 (379)
                      ||||++|+||||+.||+ +.+|||+++. +..++.+|+|||+||+++.+.+.. ...+++..||++|.++.+++....|.
T Consensus        70 fSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~  149 (351)
T PLN03156         70 FCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGE  149 (351)
T ss_pred             ccCCChhhhhHHHHhCCCCCCCCCcCcccCchhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhCh
Confidence            99999999999999999 7889999764 245788999999999998776531 23578999999999998888877776


Q ss_pred             HHHHhhhcCcEEEEeecccchhhhhccCCCC-ccccHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCCccccccc
Q 016962          162 EEAETLLSEAVYLFGVGGNDYFNLFTSNSSD-LHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVL  240 (379)
Q Consensus       162 ~~a~~~~~~sL~~i~iG~ND~~~~~~~~~~~-~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vv~~lpplg~~P~~~~~  240 (379)
                      +.+++..+++||+||||+|||+..+...... .....+++++.+++.+.+.|++||++|||||+|+|+||+||+|..+..
T Consensus       150 ~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~  229 (351)
T PLN03156        150 EKANEIISEALYLISIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTT  229 (351)
T ss_pred             HHHHHHHhcCeEEEEecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhh
Confidence            6666778999999999999998655321111 123567899999999999999999999999999999999999987654


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccceEEEeccchhHHHHhcCCCCCCCccc-ccccccCCCCCCccCC
Q 016962          241 FPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEV-TACCGSGPYGGLSSCG  319 (379)
Q Consensus       241 ~~~~~~~~~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~-~aCc~~g~~~~~~~C~  319 (379)
                      ...+..+|.+.+|.+++.||++|++++++|++++||++|+++|+|+++.++++||++|||+++ ++||+.|.++....|+
T Consensus       230 ~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~  309 (351)
T PLN03156        230 NLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCN  309 (351)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccC
Confidence            222346899999999999999999999999999999999999999999999999999999999 9999988888888898


Q ss_pred             CccCccccccCCCCCCceEeCCCChhHHHHHHHHHHHHcC
Q 016962          320 GKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNG  359 (379)
Q Consensus       320 ~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~~  359 (379)
                      .    .....|++|++|+|||++|||+++|++||+.++++
T Consensus       310 ~----~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~  345 (351)
T PLN03156        310 R----NNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKT  345 (351)
T ss_pred             C----CCCCccCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence            5    22248999999999999999999999999999985

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 6e-54
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  187 bits (475), Expect = 6e-54
 Identities = 55/328 (16%), Positives = 92/328 (28%), Gaps = 34/328 (10%)

Query: 43  ALFIFGDSLFDAGINNYINTTTDYQANFWPYGESFFDY-PTGRFSDGRLIPDFIAEYAEL 101
            L +FGDSL DAG            +           Y        G   P  +     +
Sbjct: 17  TLVVFGDSLSDAGQFPDPAGP--AGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGI 74

Query: 102 P---FIPTFLPYHNHDQFTYGVNFASGGAGALVETHQGF-VIDLETQLSYFKIVEKLLKQ 157
                  +  P +       G N+A GG                  +     +  +    
Sbjct: 75  APGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYL 134

Query: 158 KLGDEEAETLLSEAVYLFGVGGNDYFNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYK 217
                +       A+Y    GGND+      N                G L ++++ + +
Sbjct: 135 VDRARQGLGADPNALYYITGGGNDFLQGRILNDVQ--------AQQAAGRLVDSVQALQQ 186

Query: 218 RGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKALSELLQELEGELKGF 277
            G R      L  LG  PA          P    A +     N  L+  L +      G 
Sbjct: 187 AGARYIVVWLLPDLGLTPA------TFGGPLQPFASQLSGTFNAELTAQLSQA-----GA 235

Query: 278 KYAYHDFFTSISQRFNNPSKYGFKEV---TACCGSGPYGGLSSCGGKRAIKEYELCDNPN 334
                +    + +   NP+ +G          C SG    ++   G           +P+
Sbjct: 236 NVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGS-----TPDPS 290

Query: 335 EYLFFDSSHSSEKAYKQIAELMWNGTPD 362
           + LF DS H +    + IA+  ++    
Sbjct: 291 KLLFNDSVHPTITGQRLIADYTYSLLSA 318
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.68
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.55
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.47
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.43
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.42
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.37
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.36
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.28
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.27
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.24
2hsj_A214 Putative platelet activating factor; structr genom 99.2
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.18
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.17
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.15
3bzw_A274 Putative lipase; protein structure initiative II, 99.14
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.13
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.05
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.0
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 98.96
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 98.91
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.9
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 98.88
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.74
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.59
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 82.17
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=5.4e-59  Score=486.38  Aligned_cols=305  Identities=20%  Similarity=0.244  Sum_probs=239.1

Q ss_pred             ccCCCCCcEEEEcCCccccCCCCCCcccccc--ccCCCCCCCCCCCCCCCcCCC-CCCcHHHHHHhhcCCCC--CCCCCC
Q 016962           35 LSLPRRQVALFIFGDSLFDAGINNYINTTTD--YQANFWPYGESFFDYPTGRFS-DGRLIPDFIAEYAELPF--IPTFLP  109 (379)
Q Consensus        35 ~~~~~~~~~l~vFGDSlsD~Gn~~~~~t~~~--~~~~~~Pyg~~~~~~ptgRfS-nG~~~~d~la~~lg~~~--~~~~l~  109 (379)
                      .+.++++++||+||||+||+||+........  .+...+| |.+|+   +|||| ||++|+||||+.||+|.  ++||+.
T Consensus         9 ~~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~-g~~~~---~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~   84 (632)
T 3kvn_X            9 LEAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRV-GPTYQ---NGSGEIFGPTAPMLLGNQLGIAPGDLAASTS   84 (632)
T ss_dssp             TSCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBC-SSSCC---TTSSCCBCCCHHHHHHHHTTCCGGGGSBSSC
T ss_pred             ccCCCCCccEEEEccccccCCCcccccCCcCCccccccCC-CCccc---cCcccccCCchHHHHHHHcCCCccccCcccc
Confidence            4568899999999999999999743321110  0111123 76665   79999 99999999999999983  667765


Q ss_pred             CC-CCCCCCCcceeeeecCcc---cccCC--ccccccHHHHHHHHH-HHHHHHHHhhCcHHHHhhhcCcEEEEeecccch
Q 016962          110 YH-NHDQFTYGVNFASGGAGA---LVETH--QGFVIDLETQLSYFK-IVEKLLKQKLGDEEAETLLSEAVYLFGVGGNDY  182 (379)
Q Consensus       110 ~~-~~~~~~~G~NfA~gGA~~---~~~~~--~~~~~~l~~Qi~~f~-~~~~~l~~~~G~~~a~~~~~~sL~~i~iG~ND~  182 (379)
                      +. .+.++.+|+|||+|||++   .+.+.  ...++++..||.+|+ .+++++..     ...+..+++||+||||+|||
T Consensus        85 ~~~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~-----~~~~~~~~sL~~v~iG~ND~  159 (632)
T 3kvn_X           85 PVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR-----QGLGADPNALYYITGGGNDF  159 (632)
T ss_dssp             HHHHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT-----TTCCCCTTSEEEECCSHHHH
T ss_pred             ccccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh-----ccCccCCCCEEEEEEechhh
Confidence            21 135688999999999997   33321  223456666666655 44433322     12356799999999999999


Q ss_pred             hhhhccCCCCccccHHHHHHHHHHHHHHHHHHHHHcCCceEEEeCCCCCCCcccccccCCCCCCCchhHHHHHHHHHHHH
Q 016962          183 FNLFTSNSSDLHFSKKEFVGMVIGNLTNTIKEIYKRGGRKFAFANLCPLGCLPAMKVLFPGSTSPCVEDAQEFVQLHNKA  262 (379)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~n~~~~~fN~~  262 (379)
                      +..+..        ...+++.+++++.++|++||++|||+|+|+++||+||+|...      ..+|.+.+|++++.||++
T Consensus       160 ~~~~~~--------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~------~~~c~~~~n~~~~~~N~~  225 (632)
T 3kvn_X          160 LQGRIL--------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF------GGPLQPFASQLSGTFNAE  225 (632)
T ss_dssp             HTTCCC--------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT------TSTTHHHHHHHHHHHHHH
T ss_pred             hccccc--------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc------CCCchHHHHHHHHHHHHH
Confidence            875432        135788999999999999999999999999999999999953      247999999999999999


Q ss_pred             HHHHHHHHHhhcccceEEEeccchhHHHHhcCCCCCCCccc---ccccccCCCCCCccCCCccCccccccCCCCCCceEe
Q 016962          263 LSELLQELEGELKGFKYAYHDFFTSISQRFNNPSKYGFKEV---TACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFF  339 (379)
Q Consensus       263 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~---~aCc~~g~~~~~~~C~~~~~~~~~~~C~~~~~ylfw  339 (379)
                      |++++++|+     .+|+++|+|+++.++++||++|||+++   ++||+.+.     .|+.........+|+||++|+||
T Consensus       226 L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C~~~~~~~~~~~C~~~~~y~fw  295 (632)
T 3kvn_X          226 LTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GCTMNPTYGINGSTPDPSKLLFN  295 (632)
T ss_dssp             HHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TSCBCTTTSTTSSSCCGGGCSBS
T ss_pred             HHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----ccCCcccccccccCCCccceEEe
Confidence            999999986     379999999999999999999999985   59998763     78752000013589999999999


Q ss_pred             CCCChhHHHHHHHHHHHHcCCCCCCCCCChhHhhcC
Q 016962          340 DSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFEH  375 (379)
Q Consensus       340 D~vHPT~~~h~~iA~~~~~~~~~~~~p~~~~~l~~~  375 (379)
                      |++||||++|++||+.++++   +..|+++++|+++
T Consensus       296 D~~HpTe~~~~~ia~~~~~~---~~~P~~~~~l~~~  328 (632)
T 3kvn_X          296 DSVHPTITGQRLIADYTYSL---LSAPWELTLLPEM  328 (632)
T ss_dssp             SSSCBCHHHHHHHHHHHHHH---HHTHHHHTTHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHhc---cCCCccHHHHHHH
Confidence            99999999999999999995   5679999988764
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.63
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.38
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.25
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.23
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.21
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.11
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 98.97
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.94
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 98.84
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.68
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.63
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.63  E-value=5.5e-16  Score=143.73  Aligned_cols=214  Identities=14%  Similarity=-0.006  Sum_probs=119.6

Q ss_pred             CCCcHHHHHHhhcCCCCCCCCCCCCCCCCCCCcceeeeecCcccccCCcc----ccccHHHHHHHHHHHHHHHHHhhCcH
Q 016962           87 DGRLIPDFIAEYAELPFIPTFLPYHNHDQFTYGVNFASGGAGALVETHQG----FVIDLETQLSYFKIVEKLLKQKLGDE  162 (379)
Q Consensus        87 nG~~~~d~la~~lg~~~~~~~l~~~~~~~~~~G~NfA~gGA~~~~~~~~~----~~~~l~~Qi~~f~~~~~~l~~~~G~~  162 (379)
                      .+..|+++||+.|+.....          ...-.|||.+|+++.+-....    .......|++..              
T Consensus        34 s~~~y~~~la~~l~~~~~~----------~~~~~n~a~sGatt~~~~~~~~~~~~~~~~~~Q~~~l--------------   89 (302)
T d1esca_          34 AKENYPAVATRSLADKGIT----------LDVQADVSCGGALIHHFWEKQELPFGAGELPPQQDAL--------------   89 (302)
T ss_dssp             BTTCHHHHHHHHHHTTTCE----------EEEEEECCCTTCCGGGGTSCEECGGGCCEECCGGGGC--------------
T ss_pred             CCcCHHHHHHHHhccccCC----------ceeEEEeeecccchhhhhccccccccccchhhhhhhc--------------
Confidence            3678999999999875311          122379999999987543211    111222243321              


Q ss_pred             HHHhhhcCcEEEEeecccchhhhhcc------CCC---------C--c----------ccc----HHHHHHHHHHHHHHH
Q 016962          163 EAETLLSEAVYLFGVGGNDYFNLFTS------NSS---------D--L----------HFS----KKEFVGMVIGNLTNT  211 (379)
Q Consensus       163 ~a~~~~~~sL~~i~iG~ND~~~~~~~------~~~---------~--~----------~~~----~~~~v~~~v~~i~~~  211 (379)
                          ....+|++|+||+||+......      ...         .  .          ...    ....+..+..++.+.
T Consensus        90 ----~~~~dlVtl~iGgND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  165 (302)
T d1esca_          90 ----KQDTQLTVGSLGGNTLGFNRILKQCSDELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEEL  165 (302)
T ss_dssp             ----CTTCCEEEECCCHHHHTHHHHHHHTCTTTTSSCSSCCCCSSTTSCGGGHHHHTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----cCCCCEEEEecCCcccchhhhhhhhhhccccccccccccccccccccccccccccchhhhhhHHHHHHHHHHHHHH
Confidence                2256799999999998532110      000         0  0          001    122334455555566


Q ss_pred             HHHHHHcC-CceEEEeCCCCCCCcccccc-----cCCC-------CCCCchhHHHHHHHHHHHHHHHHHHHHHhhcccce
Q 016962          212 IKEIYKRG-GRKFAFANLCPLGCLPAMKV-----LFPG-------STSPCVEDAQEFVQLHNKALSELLQELEGELKGFK  278 (379)
Q Consensus       212 v~~L~~~G-Ar~~vv~~lpplg~~P~~~~-----~~~~-------~~~~~~~~~n~~~~~fN~~L~~~l~~l~~~~~~~~  278 (379)
                      ++++.+.. --+|++++.|++.  |....     ....       -...-...++.+.+.+|..+++..++       .+
T Consensus       166 ~~~i~~~~p~a~iv~~~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~~-------~~  236 (302)
T d1esca_         166 LDRIGYFAPDAKRVLVGYPRLV--PEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAAD-------GG  236 (302)
T ss_dssp             HHHHHHHSTTCEEEEECCCCCS--CSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHHT-------TT
T ss_pred             HHHHHHHCCCCeEEEecCcccc--cccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH-------cC
Confidence            66665543 3368899988653  11100     0000       01223456778888888888765432       34


Q ss_pred             EEEeccchhHHHHhcCCCCCCCcccccccccCCCCCCccCCCccCccccccCCCCCCceEeCCCChhHHHHHHHHHHHHc
Q 016962          279 YAYHDFFTSISQRFNNPSKYGFKEVTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWN  358 (379)
Q Consensus       279 i~~~D~~~~~~~i~~nP~~yGf~~~~aCc~~g~~~~~~~C~~~~~~~~~~~C~~~~~ylfwD~vHPT~~~h~~iA~~~~~  358 (379)
                      +.++|++..|..       +     ..|....++-.    +     .......++..+++||.+|||++||++||+.+.+
T Consensus       237 v~~vd~~~~f~~-------~-----~~c~~~~~~~~----~-----~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~i~~  295 (302)
T d1esca_         237 ADFVDLYAGTGA-------N-----TACDGADRGIG----G-----LLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVAD  295 (302)
T ss_dssp             CEEECTGGGCTT-------S-----STTSTTSCSBC----C-----SSSEEEEESSSCEEECSSCBCHHHHHHHHHHHHH
T ss_pred             CEEEechhhhcc-------c-----ccccccccccc----c-----cccccccccccccccCCcCCCHHHHHHHHHHHHH
Confidence            778999886642       1     12211111000    0     0001223567899999999999999999999986
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure