Citrus Sinensis ID: 017051
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJU7 | 437 | Purple acid phosphatase 1 | yes | no | 0.952 | 0.823 | 0.772 | 1e-170 | |
| Q8S340 | 434 | Purple acid phosphatase 2 | no | no | 0.891 | 0.776 | 0.644 | 1e-128 | |
| Q9LXI4 | 437 | Purple acid phosphatase 2 | no | no | 0.933 | 0.807 | 0.604 | 1e-121 | |
| Q9LXI7 | 427 | Probable purple acid phos | no | no | 0.933 | 0.826 | 0.580 | 1e-115 | |
| Q949Y3 | 475 | Bifunctional purple acid | no | no | 0.859 | 0.684 | 0.426 | 1e-71 | |
| Q6TPH1 | 458 | Purple acid phosphatase 2 | no | no | 0.835 | 0.689 | 0.422 | 2e-70 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.859 | 0.675 | 0.447 | 2e-69 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.957 | 0.776 | 0.405 | 2e-69 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.947 | 0.768 | 0.399 | 5e-68 | |
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.939 | 0.763 | 0.415 | 7e-67 |
| >sp|Q9LJU7|PPA18_ARATH Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 596 bits (1537), Expect = e-170, Method: Compositional matrix adjust.
Identities = 278/360 (77%), Positives = 307/360 (85%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
MMA MEPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
|
Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q8S340|PPA22_ARATH Purple acid phosphatase 22 OS=Arabidopsis thaliana GN=PAP22 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 218/338 (64%), Positives = 255/338 (75%), Gaps = 1/338 (0%)
Query: 26 QPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAE 85
QP R + F + + S PQQVHISLAG HMRVT+IT+D SVVEYG PG Y+ A
Sbjct: 30 QPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFITEDNKVESVVEYGKQPGKYDGKAT 89
Query: 86 GESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQFPITFAVAGDL 145
GE TSY+Y FY+SGKIHH IGPL+ +T Y+YRCG GPEF FKTPP+ FP+ FA+ GDL
Sbjct: 90 GECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGNGPEFSFKTPPSTFPVEFAIVGDL 149
Query: 146 GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205
GQT WT +TL HI YDV LLPGDLSYAD Q WD+FG LV+PLAS RPWMVT+GNH
Sbjct: 150 GQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLWDSFGRLVEPLASKRPWMVTEGNH 209
Query: 206 EKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQY 264
E E P+I F+SYNARW MP ES S SNLYYSFDVAG H +MLGSY D+D SDQY
Sbjct: 210 EIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSFDVAGVHTVMLGSYTDFDCESDQY 269
Query: 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGH 324
+WL+ DL+KVDRK TPW++VLLH PWYN+NEAH+GEG+ M ME LL+ A VD+V +GH
Sbjct: 270 QWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEGESMREAMESLLFNARVDVVFSGH 329
Query: 325 VHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
VHAYER RV N K DPCG ++ITIGDGGN+EGLA +
Sbjct: 330 VHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSF 367
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI4|PPA21_ARATH Purple acid phosphatase 21 OS=Arabidopsis thaliana GN=PAP21 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/359 (60%), Positives = 258/359 (71%), Gaps = 6/359 (1%)
Query: 9 AFVFISATVTTAEY----IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDD 64
+ F+S V A Y RP PR L +P +PQQVHISLAG HMRVT+ TDD
Sbjct: 14 SLFFLSPFVCQANYDSNFTRPPPR-PLFIVSHGRPKFYPQQVHISLAGKDHMRVTYTTDD 72
Query: 65 ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
+ S+VEYG P Y+ GESTSY Y FY SGKIHH IGPL+ +T Y+YRCG G
Sbjct: 73 LNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRCGGHGD 132
Query: 125 EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT 184
EF FKTPP++FPI FAVAGDLGQT WT TLD I + +DV LLPGDLSYAD Q WD+
Sbjct: 133 EFSFKTPPSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQPLWDS 192
Query: 185 FGELVQPLASARPWMVTQGNHEKESIPLIMD-AFQSYNARWKMPFEESGSNSNLYYSFDV 243
FG L++ LAS RPWMVT+GNHE ES P +F+SYNARW MP ES S+SNLYYSFDV
Sbjct: 193 FGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLYYSFDV 252
Query: 244 AGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDG 303
AG H +MLGSY Y+ +SDQY WL+ DL KVDRKKTPWL+V++H PWY++N+AH GEG+
Sbjct: 253 AGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHYGEGEK 312
Query: 304 MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
M + +E LLY A VD+V AGHVH YER + N K DPCG +YITIGDGGN+EGLA ++
Sbjct: 313 MRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGLALRF 371
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9LXI7|PPA20_ARATH Probable purple acid phosphatase 20 OS=Arabidopsis thaliana GN=PAP20 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/365 (58%), Positives = 257/365 (70%), Gaps = 12/365 (3%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y R R+ L P + + P QVHISL G MR++WIT
Sbjct: 7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
SPSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG GP
Sbjct: 67 ISPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCG--GP 123
Query: 125 ----EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
EF F+TPP++FPI FAV+GDLG + W+KSTL+H+ + YDV +LPGDLSYA+ Q
Sbjct: 124 SSTQEFSFRTPPSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQP 183
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYY 239
WDTFG LVQPLAS RPWMVT GNHE E IP++ + F +YN RW+MPFEESGS+SNLYY
Sbjct: 184 LWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYY 243
Query: 240 SFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299
SF+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 244 SFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG 303
Query: 300 EGDG--MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357
E + M ME LLY A VDLV AGHVHAYER RV K D CG VYI IGDGGN EG
Sbjct: 304 EKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEG 363
Query: 358 LARKY 362
LA KY
Sbjct: 364 LATKY 368
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q949Y3|PPA26_ARATH Bifunctional purple acid phosphatase 26 OS=Arabidopsis thaliana GN=PAP26 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 212/352 (60%), Gaps = 27/352 (7%)
Query: 37 PKPSSHPQQVHISLAGD---SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK + PQQVHI+ GD + ++W+T DE S V YG G Y A+G +Y +
Sbjct: 48 PKGYNAPQQVHIT-QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRC--GRQGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y+SG IHH ++ LEHDT Y+Y+ G EF F TPP P F + GD+GQT
Sbjct: 107 YKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQT 166
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH-----RWDTFGELVQPLASARPWMVTQG 203
+ STL+H + L GDLSYAD Q+ RWD++G V+ + +PW+ + G
Sbjct: 167 FNSLSTLEHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAG 226
Query: 204 NHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261
NHE + +P + + F++Y R+ P+ S S+S L+Y+ A AH+I+L SY+ + +Y+
Sbjct: 227 NHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYT 286
Query: 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVL 321
Q+ WL ++L++VDR+KTPWL+VL+HVP YNSNEAH EG+ M A E VD++
Sbjct: 287 PQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIF 346
Query: 322 AGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKEGLARKY 362
AGHVHAYERS R++N + PD VYIT+GDGGN+EGLA ++
Sbjct: 347 AGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRF 398
|
Metallo-phosphoesterase involved in phosphate metabolism. Acid phosphatase activity with phosphoenolpyruvate, inorganic pyrophosphate, phenyl-phosphate and p-nitrophenyl-phosphate as the most effective substrates. No activity with phytic acid, phosphocholine or bis-p-nitrophenyl-phosphate. Has a peroxidase activity at alkaline pH. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: . EC: 7 |
| >sp|Q6TPH1|PPA23_ARATH Purple acid phosphatase 23 OS=Arabidopsis thaliana GN=PAP23 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 200/369 (54%), Gaps = 53/369 (14%)
Query: 40 SSHPQQVHISLAGDSHMRVTWITDD------------ESSPSVVEYGTSPGGYNCGAEGE 87
S P+Q+ ++L+ + M V+W+T D S S V YG G Y +G
Sbjct: 62 SDFPEQIALALSTPTSMWVSWVTGDAIVGKDVKPLDPSSIASEVWYGKEKGNYMLKKKGN 121
Query: 88 STSYRYLF-------YRSGKIHHTVIGPLEHDTVYFYRCG-----RQGPEFEFKTPPA-- 133
+T Y L+ Y SG IHH +I LE +T Y+YRCG E F+T P
Sbjct: 122 ATVYSQLYPSDGLLNYTSGIIHHVLIDGLEPETRYYYRCGDSSVPAMSEEISFETLPLPS 181
Query: 134 --QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM------------- 178
+P A GDLG T T +T+DH+ + + ++ GDL+YA+
Sbjct: 182 KDAYPHRIAFVGDLGLTSNTTTTIDHLMENDPSLVIIVGDLTYANQYRTIGGKGVPCFSC 241
Query: 179 -----------QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP 227
Q RWD +G ++PL S P MV +GNHE E + F+SY+ R+ +P
Sbjct: 242 SFPDAPIRETYQPRWDAWGRFMEPLTSKVPTMVIEGNHEIEPQASGI-TFKSYSERFAVP 300
Query: 228 FEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287
ESGSNSNLYYSFD G H +MLG+Y DY+ QY WLK+DLSKVDR TPWL+ +H
Sbjct: 301 ASESGSNSNLYYSFDAGGVHFVMLGAYVDYNNTGLQYAWLKEDLSKVDRAVTPWLVATMH 360
Query: 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYI 347
PWYNS +H E + M ME LLY VD+V AGHVHAYER R+ N DPCG VYI
Sbjct: 361 PPWYNSYSSHYQEFECMRQEMEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYI 420
Query: 348 TIGDGGNKE 356
TIGDGGN E
Sbjct: 421 TIGDGGNIE 429
|
Acid phosphatase activity with ATP, ADP, dATP, pyrophosphate, polyphosphate, phosphoserine and phosphothreonine. Low or no activity with phosphotyrosine, AMP and phytate. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 211/351 (60%), Gaps = 26/351 (7%)
Query: 37 PKPSSHPQQVHISLAGD---SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK PQQVHI+ GD + V+W+T + S V YGTSP Y+ A+G++T+Y Y
Sbjct: 54 PKNQFSPQQVHIT-QGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTY 112
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGR--QGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y SG IHH ++ LE+DT Y+Y+ G+ EF F TPP P TF + GDLGQT
Sbjct: 113 YDYTSGYIHHCLLDKLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQT 172
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQ----HRWDTFGELVQPLASARPWMVTQGN 204
+ STL+H + K L GDLSYAD RWD++G V+ + +PW+ T GN
Sbjct: 173 YNSLSTLEHYMKSKGQTVLFVGDLSYADRYSCNNGTRWDSWGRFVERSVAYQPWIWTVGN 232
Query: 205 HEKESIPLIMDAF--QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD 262
HE E P + + F ++Y R+ P S S+S L+YS A AH+I+L SY+ + +Y+
Sbjct: 233 HEIEYRPDLGEVFPFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTP 292
Query: 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLA 322
Q+ WL ++L++VDR+KTPWL+VL+H P YNSNEAH EG+ M E VDLV A
Sbjct: 293 QWLWLSEELTRVDREKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFA 352
Query: 323 GHVHAYERSIRVNN-----------GKPDPCGAVYITIGDGGNKEGLARKY 362
GHVHAYERS R++N PD VYIT+GDGGN+EGLA ++
Sbjct: 353 GHVHAYERSYRISNIVYNITSGNRYPIPDKSAPVYITVGDGGNQEGLAERF 403
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/402 (40%), Positives = 230/402 (57%), Gaps = 40/402 (9%)
Query: 1 MELKFVLTAFVFIS-ATV----TTAEYIR-PQPRRTLEFPWDPKPSSH--PQQVHISLAG 52
M + +L FVF+S ATV TT+ ++R QP + P P+ H P+QVHI + G
Sbjct: 1 MRMNKILLVFVFLSIATVINSGTTSNFVRTAQPSTEMSLETFPSPAGHNAPEQVHI-VQG 59
Query: 53 DSHMR---VTWITD-DESSPSVVEYGTSPGG----YNCGAEGESTSYRYLFYRSGKIHHT 104
D + R ++W+T + + +VV Y + G ++SYR+ Y SG +HH
Sbjct: 60 DYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTSGFLHHA 119
Query: 105 VIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH-I 158
I LE+DT Y Y G G +F F +PP P TF + GDLGQT + TL H +
Sbjct: 120 TIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNETLYHYM 179
Query: 159 GQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214
K L PGDLSYAD + Q +WD++G V+P A+ + ++ GNHE + +P I
Sbjct: 180 SNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEIDFVPNIG 239
Query: 215 D--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLS 272
+ AF+ Y R+ ++ S S S L+YS A AH+I+L SY+ Y +Y+ QY WL+ +L
Sbjct: 240 EPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYVWLEQELK 299
Query: 273 KVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332
KV+R++TPWL+V++H PWYNSN H EG+ M A+ E + VDLVL+GHVH+YERS
Sbjct: 300 KVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHVHSYERSE 359
Query: 333 RVNNGK-----------PDPCGAVYITIGDGGNKEGLARKYV 363
RV+N K DP +YITIGDGGN EG+A +
Sbjct: 360 RVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFT 401
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 258 bits (659), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 228/401 (56%), Gaps = 43/401 (10%)
Query: 4 KFVLTAFVFISATVT-----TAEYIRPQPRRTLEFPWDPKPS----SHPQQVHISLAGDS 54
V+ AF+F+S T T++++R Q ++E D PS + P+QVH++ GD
Sbjct: 3 NLVIFAFLFLSITTVINGGITSKFVR-QALPSIEMSLDTFPSPGGYNTPEQVHLT-QGDH 60
Query: 55 H---MRVTWITD-DESSPSVVEYGTSPGGYNCG-----AEGESTSYRYLFYRSGKIHHTV 105
M V+W+T + + +VV Y + G + A + SYR+ Y SG +HH
Sbjct: 61 DGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYSSGFLHHAT 120
Query: 106 IGPLEHDTVYFYRCG--RQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDH-IG 159
I LE+DT Y Y G + +F F TPP P TF + GDLGQT + TL H +
Sbjct: 121 IKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASNETLYHYMS 180
Query: 160 QCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215
K L GDLSYAD + Q +WDT+G ++P A+ +P++ GNHE + +P I +
Sbjct: 181 NPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHEIDFVPNIGE 240
Query: 216 --AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSK 273
AF+ Y R+ ++ S S S L+YS A AH+I+L SY+ Y +Y+ QY WL+ +L
Sbjct: 241 PHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQYIWLEQELKN 300
Query: 274 VDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR 333
V+R++TPWL+V++H PWYNSN H EG+ M + E L + VDLVL+GHVHAYERS R
Sbjct: 301 VNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGHVHAYERSER 360
Query: 334 VNNGK-----------PDPCGAVYITIGDGGNKEGLARKYV 363
++N K DP +YITIGDGGN EG+A +V
Sbjct: 361 ISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFV 401
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (649), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 215/390 (55%), Gaps = 35/390 (8%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWD------PKPSSHPQQVHISLAGD--- 53
L VL A + + T+ +IR + +T++ P D P + PQQVHI+ GD
Sbjct: 11 LAVVLAAVMNAAIAGITSSFIR-KVEKTVDMPLDSDVFRVPPGYNAPQQVHIT-QGDHVG 68
Query: 54 SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113
M V+W+T DE S V Y + + A G +Y Y Y SG IHH I LE++T
Sbjct: 69 KAMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHHCTIRNLEYNT 128
Query: 114 VYFYRCG--RQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQ--CKYDVH 166
Y+Y G F F TPP P TF + GDLGQ+ + TL H + K
Sbjct: 129 KYYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHYERNPIKGQAV 188
Query: 167 LLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSY 220
L GDLSYAD Y H RWDT+G V+ + +PW+ T GNHE + P I + F+ +
Sbjct: 189 LFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPEIGETKPFKPF 248
Query: 221 NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280
R+ +P++ SGS +Y A A++I+L SY+ Y +Y+ QY+WL+++L KV+R +TP
Sbjct: 249 TKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEELPKVNRTETP 308
Query: 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVN----- 335
WL+VL+H PWYNS H EG+ M + EP VDLV AGHVHAYERS RV+
Sbjct: 309 WLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYERSERVSNVAYD 368
Query: 336 --NGKPDPC----GAVYITIGDGGNKEGLA 359
NGK P VYITIGDGGN EGLA
Sbjct: 369 IVNGKCTPVRDQSAPVYITIGDGGNLEGLA 398
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| 358248462 | 469 | uncharacterized protein LOC100782338 [Gl | 0.960 | 0.773 | 0.786 | 1e-172 | |
| 187949279 | 435 | purple acid phosphatase [Glycine max] | 0.960 | 0.834 | 0.786 | 1e-172 | |
| 357459553 | 433 | Purple acid phosphatase [Medicago trunca | 0.960 | 0.838 | 0.787 | 1e-172 | |
| 224126441 | 432 | predicted protein [Populus trichocarpa] | 0.955 | 0.835 | 0.779 | 1e-170 | |
| 357601490 | 437 | PAP18 [Gossypium hirsutum] | 0.910 | 0.787 | 0.808 | 1e-169 | |
| 22331208 | 437 | purple acid phosphatase 18 [Arabidopsis | 0.952 | 0.823 | 0.772 | 1e-168 | |
| 25229112 | 437 | putative purple acid phosphatase [Arabid | 0.952 | 0.823 | 0.769 | 1e-167 | |
| 224117498 | 432 | predicted protein [Populus trichocarpa] | 0.955 | 0.835 | 0.776 | 1e-167 | |
| 357494441 | 439 | Purple acid phosphatase [Medicago trunca | 0.925 | 0.797 | 0.772 | 1e-164 | |
| 358248708 | 460 | purple acid phosphatase 18-like [Glycine | 0.912 | 0.75 | 0.787 | 1e-162 |
| >gi|358248462|ref|NP_001239630.1| uncharacterized protein LOC100782338 [Glycine max] gi|304421382|gb|ADM32490.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/365 (78%), Positives = 321/365 (87%), Gaps = 2/365 (0%)
Query: 1 MELKFVL-TAFVFISATVTTA-EYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRV 58
MELK +L T + +S + T A +YIRPQPR+T PW KPSS+PQQVHISLAG+ HMRV
Sbjct: 35 MELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRV 94
Query: 59 TWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118
TWITDD S+PS+VEYGTSPG Y+ AEGE+TSY YL Y SGKIHHTVIGPLEH++VY+YR
Sbjct: 95 TWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYR 154
Query: 119 CGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM 178
CG QGP+F+ +TPPAQ PITFAVAGDLGQTGWTKSTLDHI QCKY+VHLLPGDLSYADY+
Sbjct: 155 CGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYI 214
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
QHRWD+FG LVQPLASARPWMVTQGNHE ESIPL+ D F SYN+RWKMPFEESGSNSNLY
Sbjct: 215 QHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLY 274
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+VAG H+IMLGSYADYDEYS+QY WLK+DLSKVDR++TPWL+VL HVPWYNSN AHQ
Sbjct: 275 YSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQ 334
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
GEG MMA MEPLLYAAS DLVLAGHVHAYERS RV N + DPCG+V+ITIGDGGNKEGL
Sbjct: 335 GEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGL 394
Query: 359 ARKYV 363
A KY+
Sbjct: 395 APKYI 399
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|187949279|gb|ACD43082.1| purple acid phosphatase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/365 (78%), Positives = 321/365 (87%), Gaps = 2/365 (0%)
Query: 1 MELKFVL-TAFVFISATVTTA-EYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRV 58
MELK +L T + +S + T A +YIRPQPR+T PW KPSS+PQQVHISLAG+ HMRV
Sbjct: 1 MELKLLLITVLMMVSLSATAAADYIRPQPRKTFHLPWHSKPSSYPQQVHISLAGEQHMRV 60
Query: 59 TWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118
TWITDD S+PS+VEYGTSPG Y+ AEGE+TSY YL Y SGKIHHTVIGPLEH++VY+YR
Sbjct: 61 TWITDDNSAPSIVEYGTSPGRYDSVAEGETTSYSYLLYSSGKIHHTVIGPLEHNSVYYYR 120
Query: 119 CGRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYM 178
CG QGP+F+ +TPPAQ PITFAVAGDLGQTGWTKSTLDHI QCKY+VHLLPGDLSYADY+
Sbjct: 121 CGGQGPQFQLRTPPAQLPITFAVAGDLGQTGWTKSTLDHIDQCKYNVHLLPGDLSYADYI 180
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
QHRWD+FG LVQPLASARPWMVTQGNHE ESIPL+ D F SYN+RWKMPFEESGSNSNLY
Sbjct: 181 QHRWDSFGRLVQPLASARPWMVTQGNHEVESIPLLKDGFLSYNSRWKMPFEESGSNSNLY 240
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+VAG H+IMLGSYADYDEYS+QY WLK+DLSKVDR++TPWL+VL HVPWYNSN AHQ
Sbjct: 241 YSFEVAGVHIIMLGSYADYDEYSEQYGWLKEDLSKVDRERTPWLIVLFHVPWYNSNTAHQ 300
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
GEG MMA MEPLLYAAS DLVLAGHVHAYERS RV N + DPCG+V+ITIGDGGNKEGL
Sbjct: 301 GEGADMMASMEPLLYAASADLVLAGHVHAYERSKRVYNKRLDPCGSVHITIGDGGNKEGL 360
Query: 359 ARKYV 363
A KY+
Sbjct: 361 APKYI 365
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357459553|ref|XP_003600057.1| Purple acid phosphatase [Medicago truncatula] gi|355489105|gb|AES70308.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 286/363 (78%), Positives = 317/363 (87%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
M+LK + T + +S T T +Y+RPQPR+TL PW KPSS+PQQVHISLAGD HMRVTW
Sbjct: 1 MKLKLIPTVLLILSVTSTADDYVRPQPRKTLHLPWHSKPSSYPQQVHISLAGDKHMRVTW 60
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
ITDD+S+PSVVEYGT PG Y+ AEGE+TSY Y+FY SGKIHHTVIGPLE ++VYFYRCG
Sbjct: 61 ITDDKSAPSVVEYGTLPGKYDNVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCG 120
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPEFE KTPPAQFPI+FAV GDLGQTGWTKSTLDHI QCKYDV+L+PGDLSYADY+QH
Sbjct: 121 GLGPEFELKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCKYDVNLIPGDLSYADYIQH 180
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
RWDTFG LVQPLAS+RPWMVTQGNHE E IPL+ D F SYN+RWKMPFEESGS+SNLYYS
Sbjct: 181 RWDTFGRLVQPLASSRPWMVTQGNHEVEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYS 240
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+VAGAH+IMLGSY DYD YS+QY+WLK DLSKVDRK+TPWLLV+ HVPWYNSN AHQGE
Sbjct: 241 FEVAGAHIIMLGSYDDYDVYSEQYKWLKTDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGE 300
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
G MM MEPLLYAASVDLV AGHVHAYERS RV NGK DPCGAV+ITIGDGGNKEGLA
Sbjct: 301 GGDMMETMEPLLYAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHITIGDGGNKEGLAH 360
Query: 361 KYV 363
KY+
Sbjct: 361 KYI 363
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224126441|ref|XP_002319839.1| predicted protein [Populus trichocarpa] gi|222858215|gb|EEE95762.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 602 bits (1552), Expect = e-170, Method: Compositional matrix adjust.
Identities = 282/362 (77%), Positives = 318/362 (87%), Gaps = 1/362 (0%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
ME K VL F+ ISA T EYIRP PR+TL FPW+ K SSHPQQVHISLAGD HMRV+W
Sbjct: 1 MEPKLVLFVFLLISAAAT-CEYIRPPPRKTLHFPWNSKLSSHPQQVHISLAGDKHMRVSW 59
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
+++D+S+ +VEYGTSPG Y+ ++GESTSY YLFY SGKIHHT+IGPLE +TVY+YRCG
Sbjct: 60 VSNDKSTLPMVEYGTSPGRYSNKSQGESTSYSYLFYSSGKIHHTIIGPLEDNTVYYYRCG 119
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPE++ KTPPAQFP+ FAVAGDLGQTGWTKSTLDHI CKYDVHLLPGDLSYADY+QH
Sbjct: 120 GGGPEYKLKTPPAQFPVMFAVAGDLGQTGWTKSTLDHIDLCKYDVHLLPGDLSYADYIQH 179
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
RWDTFGELV+PLASARPWMVTQGNHEKESI D FQSYN+RWKMP+EESGS+SNLYYS
Sbjct: 180 RWDTFGELVEPLASARPWMVTQGNHEKESIMFFKDGFQSYNSRWKMPYEESGSSSNLYYS 239
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+VAGAH+IMLGSY DYDE+SDQY WLK D++KVDRKKTPWL+VL HVPWYNSNEAHQ E
Sbjct: 240 FEVAGAHIIMLGSYTDYDEHSDQYNWLKADVAKVDRKKTPWLIVLFHVPWYNSNEAHQDE 299
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
GD M+A MEPLL+AASVD+VLAGHVHAYER+ RVN GK DPCGAV+ITIGDGGN+EGLA
Sbjct: 300 GDRMLAAMEPLLHAASVDIVLAGHVHAYERTERVNKGKLDPCGAVHITIGDGGNREGLAS 359
Query: 361 KY 362
KY
Sbjct: 360 KY 361
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601490|gb|AET86955.1| PAP18 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 278/344 (80%), Positives = 300/344 (87%)
Query: 20 AEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGG 79
+Y+RPQPR+TL FPW PK S P QVHISLAG++HMR++WITDD S+PS+VEYGT PG
Sbjct: 24 TDYVRPQPRKTLHFPWKPKHPSLPHQVHISLAGENHMRISWITDDNSAPSIVEYGTLPGQ 83
Query: 80 YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQFPITF 139
Y + GE+ SY YLFY SGKIHHTVIGPLEHDT+YFYRCG QGPEF+ KTPP QFP+TF
Sbjct: 84 YTFSSSGETASYNYLFYSSGKIHHTVIGPLEHDTIYFYRCGGQGPEFQLKTPPGQFPVTF 143
Query: 140 AVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWM 199
AVAGDLGQTGWTKSTLDHI QCKYDVHLLPGDLSYAD MQH WD FGELVQPLASARPWM
Sbjct: 144 AVAGDLGQTGWTKSTLDHIDQCKYDVHLLPGDLSYADCMQHLWDNFGELVQPLASARPWM 203
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE 259
VTQGNHEKE IP DAF+SYNARWKMPFEES S SNLYYSF+VAG H+IMLGSY DYDE
Sbjct: 204 VTQGNHEKEKIPFFTDAFESYNARWKMPFEESESTSNLYYSFEVAGVHVIMLGSYTDYDE 263
Query: 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDL 319
SDQY WLK DLSKVDRKKTPWL+VL HVPWYNSN AHQGEGDGMMA MEPLLYAA VDL
Sbjct: 264 LSDQYSWLKADLSKVDRKKTPWLVVLFHVPWYNSNHAHQGEGDGMMAAMEPLLYAAGVDL 323
Query: 320 VLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYV 363
V AGHVHAYERS RVN GK DPCG V+ITIGDGGN+EGLA+KY+
Sbjct: 324 VFAGHVHAYERSKRVNKGKSDPCGTVHITIGDGGNREGLAQKYI 367
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331208|ref|NP_188686.2| purple acid phosphatase 18 [Arabidopsis thaliana] gi|75273656|sp|Q9LJU7.1|PPA18_ARATH RecName: Full=Purple acid phosphatase 18; Flags: Precursor gi|11994138|dbj|BAB01159.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|17064824|gb|AAL32566.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|20259848|gb|AAM13271.1| purple acid phosphatase-like protein [Arabidopsis thaliana] gi|332642867|gb|AEE76388.1| purple acid phosphatase 18 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 278/360 (77%), Positives = 307/360 (85%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
MMA MEPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|25229112|gb|AAN74649.1| putative purple acid phosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 277/360 (76%), Positives = 306/360 (85%)
Query: 3 LKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
L V + I + +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T
Sbjct: 7 LLLVTLSVSIIFTSAAADDYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D+SSPS VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +
Sbjct: 67 NDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGE 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+W
Sbjct: 127 GPEFHLKTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD 242
DTFGELVQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNL YSF+
Sbjct: 187 DTFGELVQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLNYSFE 246
Query: 243 VAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302
VAG H IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD
Sbjct: 247 VAGVHAIMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGD 306
Query: 303 GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
MMA MEPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 307 EMMAEMEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117498|ref|XP_002317591.1| predicted protein [Populus trichocarpa] gi|222860656|gb|EEE98203.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/362 (77%), Positives = 313/362 (86%), Gaps = 1/362 (0%)
Query: 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTW 60
ME K VL F+ ISAT + EYIRP R+ L+F K SSHPQQVHISLAGD HMRV+W
Sbjct: 1 MEPKLVLALFLLISATAAS-EYIRPSTRKNLDFSRPSKSSSHPQQVHISLAGDKHMRVSW 59
Query: 61 ITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120
+TDD+S+ S+VEYGTSPG Y+ A GEST Y YLFY SGKIHHTVIGPLE + VY+YRCG
Sbjct: 60 VTDDKSAASMVEYGTSPGRYSNIALGESTWYSYLFYSSGKIHHTVIGPLEDNAVYYYRCG 119
Query: 121 RQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
GPE++ KTPPAQFP+TFAVAGDLGQTGWT+STLDHI QCKYDVHLLPGDLSYADYMQH
Sbjct: 120 GGGPEYKLKTPPAQFPVTFAVAGDLGQTGWTQSTLDHIDQCKYDVHLLPGDLSYADYMQH 179
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYS 240
WDTFGELV+PLASARPWMVTQGNHE+ESIP + D F+ YN+RWKMPFEESGS+SNLYYS
Sbjct: 180 LWDTFGELVEPLASARPWMVTQGNHERESIPFLKDGFEPYNSRWKMPFEESGSSSNLYYS 239
Query: 241 FDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE 300
F+V+GAH+IMLGSY YDEYS+QY WL+ DL+KVDR KTPWLLVL HVPWYNSNEAHQ E
Sbjct: 240 FEVSGAHIIMLGSYTGYDEYSNQYNWLEADLAKVDRNKTPWLLVLFHVPWYNSNEAHQNE 299
Query: 301 GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
GD MM MEPLLYAASVD+VLAGHVHAYER+ RVNNGK DPCGAV+ITIGDGGN+EGLA
Sbjct: 300 GDRMMEAMEPLLYAASVDIVLAGHVHAYERTERVNNGKLDPCGAVHITIGDGGNREGLAH 359
Query: 361 KY 362
KY
Sbjct: 360 KY 361
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357494441|ref|XP_003617509.1| Purple acid phosphatase [Medicago truncatula] gi|355518844|gb|AET00468.1| Purple acid phosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 272/352 (77%), Positives = 311/352 (88%), Gaps = 2/352 (0%)
Query: 14 SATVTTAEYIRPQPRRTLE--FPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVV 71
S+TVT +Y+RP PR+ L +PWD K +PQQVHISLAGD HMR+TWITDD+ SPS V
Sbjct: 18 SSTVTADQYVRPLPRKNLNIPWPWDSKSQPYPQQVHISLAGDRHMRITWITDDKHSPSFV 77
Query: 72 EYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTP 131
EYGT PG Y+ +EGE TSY Y+ Y SGKIHHTVIGPLE++T+YFYRCG QGPEF+ KTP
Sbjct: 78 EYGTLPGRYDSISEGEFTSYNYMLYSSGKIHHTVIGPLEYNTMYFYRCGGQGPEFKLKTP 137
Query: 132 PAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQP 191
P++FPITFAVAGDLGQTGWTKSTLDHI QCKYDV+LLPGDLSYAD MQH WD+FG LV+P
Sbjct: 138 PSKFPITFAVAGDLGQTGWTKSTLDHIDQCKYDVYLLPGDLSYADCMQHLWDSFGRLVEP 197
Query: 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251
LASARPWMVT+GNHE+E+IPL+ D F SYN+RWKMPFEESGS SNLYYSF+VAG H+IML
Sbjct: 198 LASARPWMVTEGNHEEENIPLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIML 257
Query: 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311
GSYADYD+YS+QYRWLK+DLSKVDRK+TPWL+VL HVPWYNSN+AHQG GD MM +MEPL
Sbjct: 258 GSYADYDKYSEQYRWLKEDLSKVDRKRTPWLVVLFHVPWYNSNKAHQGAGDDMMTVMEPL 317
Query: 312 LYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYV 363
LYAASVDLVLAGHVHAYERS RV NG+ DPCGAV+ITIGDGGN+EGLA +Y+
Sbjct: 318 LYAASVDLVLAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYI 369
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248708|ref|NP_001239671.1| purple acid phosphatase 18-like [Glycine max] gi|255636455|gb|ACU18566.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/348 (78%), Positives = 302/348 (86%), Gaps = 3/348 (0%)
Query: 19 TAEYIRPQPRRTLEFPWD---PKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGT 75
T +Y+RP PR+TL PWD SS+PQQVHISLAGD HMRVTWITDD+ SPS VEYGT
Sbjct: 43 TPQYVRPLPRKTLTIPWDSISKAHSSYPQQVHISLAGDKHMRVTWITDDKHSPSYVEYGT 102
Query: 76 SPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEFKTPPAQF 135
PG Y+ AEGE TSY YL Y SGKIHH VIGPLE +TVYFYRCG +GPEFE KTPPAQF
Sbjct: 103 LPGRYDSIAEGECTSYNYLLYSSGKIHHAVIGPLEDNTVYFYRCGGKGPEFELKTPPAQF 162
Query: 136 PITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA 195
PITFAVAGDLGQTGWTKSTL HI QCKYDV+LLPGDLSYAD MQH WD FG+LV+PLAS
Sbjct: 163 PITFAVAGDLGQTGWTKSTLAHIDQCKYDVYLLPGDLSYADCMQHLWDNFGKLVEPLAST 222
Query: 196 RPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA 255
RPWMVT+GNHE+E+I L+ D F SYN+RWKMP+EESGS SNLYYSF+VAG H+IMLGSYA
Sbjct: 223 RPWMVTEGNHEEENILLLTDEFVSYNSRWKMPYEESGSTSNLYYSFEVAGVHVIMLGSYA 282
Query: 256 DYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA 315
DYD YS+QYRWLK+DLSKVDRK+TPWLLVL HVPWYNSN+AHQG GD MMA MEPLLYAA
Sbjct: 283 DYDVYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLYAA 342
Query: 316 SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYV 363
SVDLV+AGHVHAYERS RV NG+ DPCGAV+ITIGDGGN+EGLA KY+
Sbjct: 343 SVDLVIAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHKYI 390
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.931 | 0.805 | 0.785 | 2.5e-159 | |
| TAIR|locus:2083238 | 434 | PAP22 "purple acid phosphatase | 0.947 | 0.824 | 0.612 | 2.8e-121 | |
| TAIR|locus:2083218 | 437 | PAP21 "purple acid phosphatase | 0.944 | 0.816 | 0.598 | 5e-115 | |
| TAIR|locus:2083288 | 427 | PAP20 [Arabidopsis thaliana (t | 0.933 | 0.826 | 0.580 | 3.8e-110 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.859 | 0.684 | 0.426 | 1.1e-69 | |
| TAIR|locus:2098500 | 532 | PAP15 "purple acid phosphatase | 0.476 | 0.338 | 0.530 | 1.1e-64 | |
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.851 | 0.693 | 0.434 | 6e-64 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.740 | 0.600 | 0.442 | 7.1e-61 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.727 | 0.590 | 0.446 | 2.4e-60 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.841 | 0.679 | 0.410 | 1.3e-59 |
| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1552 (551.4 bits), Expect = 2.5e-159, P = 2.5e-159
Identities = 278/354 (78%), Positives = 307/354 (86%)
Query: 9 AFVFISATVTTAEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSP 68
+ +F SA +Y+RP+PR TL+FPW K SS P+QVHISLAGD HMRVTW+T+D+SSP
Sbjct: 15 SIIFTSAAAD--DYVRPKPRETLQFPWKQKSSSVPEQVHISLAGDKHMRVTWVTNDKSSP 72
Query: 69 SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGPEFEF 128
S VEYGTSPG Y+ +GESTSY Y+ YRSGKIHHTVIGPLE DTVY+YRCG +GPEF
Sbjct: 73 SFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIHHTVIGPLEADTVYYYRCGGEGPEFHL 132
Query: 129 KTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGEL 188
KTPPAQFPITFAVAGDLGQTGWTKSTLDHI QCKY VHLLPGDLSYADYMQH+WDTFGEL
Sbjct: 133 KTPPAQFPITFAVAGDLGQTGWTKSTLDHIDQCKYAVHLLPGDLSYADYMQHKWDTFGEL 192
Query: 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHL 248
VQPLAS RPWMVTQGNHEKESIP I+D F S+N+RWKMP+EESGSNSNLYYSF+VAG H
Sbjct: 193 VQPLASVRPWMVTQGNHEKESIPFIVDEFVSFNSRWKMPYEESGSNSNLYYSFEVAGVHA 252
Query: 249 IMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM 308
IMLGSY DYD YSDQY WLK DLSKVDR++TPWL+VL HVPWYNSN AHQ EGD MMA M
Sbjct: 253 IMLGSYTDYDRYSDQYSWLKADLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEM 312
Query: 309 EPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362
EPLLYA+ VD+V GHVHAYER+ RVNNGK DPCG V+ITIGDGGN+EGLARKY
Sbjct: 313 EPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKY 366
|
|
| TAIR|locus:2083238 PAP22 "purple acid phosphatase 22" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 221/361 (61%), Positives = 265/361 (73%)
Query: 5 FVLTAFVFISATVTTAEY--IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWIT 62
F+ +F+ ++ A+ + QP R + F + + S PQQVHISLAG HMRVT+IT
Sbjct: 7 FLSFTLLFLCPFISQADVPELSRQPPRPIVFVHNDRSKSDPQQVHISLAGKDHMRVTFIT 66
Query: 63 DDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122
+D SVVEYG PG Y+ A GE TSY+Y FY+SGKIHH IGPL+ +T Y+YRCG
Sbjct: 67 EDNKVESVVEYGKQPGKYDGKATGECTSYKYFFYKSGKIHHVKIGPLQANTTYYYRCGGN 126
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
GPEF FKTPP+ FP+ FA+ GDLGQT WT +TL HI YDV LLPGDLSYAD Q W
Sbjct: 127 GPEFSFKTPPSTFPVEFAIVGDLGQTEWTAATLSHINSQDYDVFLLPGDLSYADTHQPLW 186
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDA-FQSYNARWKMPFEESGSNSNLYYSF 241
D+FG LV+PLAS RPWMVT+GNHE E P+I F+SYNARW MP ES S SNLYYSF
Sbjct: 187 DSFGRLVEPLASKRPWMVTEGNHEIEFFPIIEHTTFKSYNARWLMPHTESFSTSNLYYSF 246
Query: 242 DVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEG 301
DVAG H +MLGSY D+D SDQY+WL+ DL+KVDRK TPW++VLLH PWYN+NEAH+GEG
Sbjct: 247 DVAGVHTVMLGSYTDFDCESDQYQWLQADLAKVDRKTTPWVVVLLHAPWYNTNEAHEGEG 306
Query: 302 DGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARK 361
+ M ME LL+ A VD+V +GHVHAYER RV N K DPCG ++ITIGDGGN+EGLA
Sbjct: 307 ESMREAMESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALS 366
Query: 362 Y 362
+
Sbjct: 367 F 367
|
|
| TAIR|locus:2083218 PAP21 "purple acid phosphatase 21" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 218/364 (59%), Positives = 262/364 (71%)
Query: 5 FVLT-AFVFISATVTTAEY----IRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVT 59
F+++ + F+S V A Y RP PR L +P +PQQVHISLAG HMRVT
Sbjct: 9 FLISFSLFFLSPFVCQANYDSNFTRPPPR-PLFIVSHGRPKFYPQQVHISLAGKDHMRVT 67
Query: 60 WITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119
+ TDD + S+VEYG P Y+ GESTSY Y FY SGKIHH IGPL+ +T Y+YRC
Sbjct: 68 YTTDDLNVASMVEYGKHPKKYDKKTAGESTSYTYFFYNSGKIHHVKIGPLKPNTKYYYRC 127
Query: 120 GRQGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQ 179
G G EF FKTPP++FPI FAVAGDLGQT WT TLD I + +DV LLPGDLSYAD Q
Sbjct: 128 GGHGDEFSFKTPPSKFPIEFAVAGDLGQTDWTVRTLDQIRKRDFDVFLLPGDLSYADTHQ 187
Query: 180 HRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD-AFQSYNARWKMPFEESGSNSNLY 238
WD+FG L++ LAS RPWMVT+GNHE ES P +F+SYNARW MP ES S+SNLY
Sbjct: 188 PLWDSFGRLLETLASTRPWMVTEGNHEIESFPTNDHISFKSYNARWLMPHAESLSHSNLY 247
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSFDVAG H +MLGSY Y+ +SDQY WL+ DL KVDRKKTPWL+V++H PWY++N+AH
Sbjct: 248 YSFDVAGVHTVMLGSYTPYESHSDQYHWLQADLRKVDRKKTPWLVVVMHTPWYSTNKAHY 307
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
GEG+ M + +E LLY A VD+V AGHVH YER + N K DPCG +YITIGDGGN+EGL
Sbjct: 308 GEGEKMRSALESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGL 367
Query: 359 ARKY 362
A ++
Sbjct: 368 ALRF 371
|
|
| TAIR|locus:2083288 PAP20 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
Identities = 212/365 (58%), Positives = 257/365 (70%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y R R+ L P + + P QVHISL G MR++WIT
Sbjct: 7 LVAILLIVLAGNVLSYDRQGTRKNLVIHPTNEDDPTFPDQVHISLVGPDKMRISWITQSS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCGRQGP 124
SPSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG GP
Sbjct: 67 ISPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCG--GP 123
Query: 125 ----EFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH 180
EF F+TPP++FPI FAV+GDLG + W+KSTL+H+ + YDV +LPGDLSYA+ Q
Sbjct: 124 SSTQEFSFRTPPSKFPIKFAVSGDLGTSEWSKSTLEHVSKWDYDVFILPGDLSYANMYQP 183
Query: 181 RWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNSNLYY 239
WDTFG LVQPLAS RPWMVT GNHE E IP++ + F +YN RW+MPFEESGS+SNLYY
Sbjct: 184 LWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHSNPFTAYNKRWRMPFEESGSSSNLYY 243
Query: 240 SFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299
SF+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 244 SFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQG 303
Query: 300 EGDG--MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357
E + M ME LLY A VDLV AGHVHAYER RV K D CG VYI IGDGGN EG
Sbjct: 304 EKESVEMKESMETLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEG 363
Query: 358 LARKY 362
LA KY
Sbjct: 364 LATKY 368
|
|
| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 150/352 (42%), Positives = 212/352 (60%)
Query: 37 PKPSSHPQQVHISLAGDSHMR---VTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
PK + PQQVHI+ GD + ++W+T DE S V YG G Y A+G +Y +
Sbjct: 48 PKGYNAPQQVHIT-QGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRC--GRQGPEFEFKTPPAQFP---ITFAVAGDLGQT 148
Y+SG IHH ++ LEHDT Y+Y+ G EF F TPP P F + GD+GQT
Sbjct: 107 YKYKSGFIHHCLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQT 166
Query: 149 GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH-----RWDTFGELVQPLASARPWMVTQG 203
+ STL+H + L GDLSYAD Q+ RWD++G V+ + +PW+ + G
Sbjct: 167 FNSLSTLEHYMESGAQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAG 226
Query: 204 NHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261
NHE + +P + + F++Y R+ P+ S S+S L+Y+ A AH+I+L SY+ + +Y+
Sbjct: 227 NHEVDYMPYMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYT 286
Query: 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVL 321
Q+ WL ++L++VDR+KTPWL+VL+HVP YNSNEAH EG+ M A E VD++
Sbjct: 287 PQWHWLSEELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIF 346
Query: 322 AGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKEGLARKY 362
AGHVHAYERS R++N + PD VYIT+GDGGN+EGLA ++
Sbjct: 347 AGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRF 398
|
|
| TAIR|locus:2098500 PAP15 "purple acid phosphatase 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 510 (184.6 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 96/181 (53%), Positives = 122/181 (67%)
Query: 179 QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLY 238
Q RWD +G ++ L S P MV +GNHE E + F++Y++R+ PF ESGS+S LY
Sbjct: 252 QPRWDYWGRFMENLTSKVPLMVIEGNHEIE-LQAENKTFEAYSSRFAFPFNESGSSSTLY 310
Query: 239 YSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ 298
YSF+ G H +MLG+Y YD+ ++QY WLK DL+KVDR TPWL+ H PWY+S AH
Sbjct: 311 YSFNAGGIHFVMLGAYIAYDKSAEQYEWLKKDLAKVDRSVTPWLVASWHPPWYSSYTAHY 370
Query: 299 GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGL 358
E + M ME LLY+ D+V GHVHAYERS RV N + DPCG VYI IGDGGN+E +
Sbjct: 371 REAECMKEAMEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKM 430
Query: 359 A 359
A
Sbjct: 431 A 431
|
|
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 152/350 (43%), Positives = 198/350 (56%)
Query: 37 PKPSSHPQQVHIS---LAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRY 93
P + PQQVHI+ L G + + V+W+T DE S V Y + AEG+ +YR+
Sbjct: 48 PPGYNAPQQVHITQGDLVGKAVI-VSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRF 106
Query: 94 LFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVAGDLGQT 148
Y SG IHHT I LE+ T Y+Y G +F F TPP P TF + GDLGQ+
Sbjct: 107 FNYSSGFIHHTTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQS 166
Query: 149 GWTKSTLDH--IGQCKYDVHLLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQ 202
+ TL H + K L GDLSYAD Y H RWD++G + + +PW+ T
Sbjct: 167 FDSNKTLSHYELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTA 226
Query: 203 GNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY 260
GNHE P I + F+ Y R+ +P++ S S S +YS A AH+I+L SY+ Y +Y
Sbjct: 227 GNHENHFAPEIGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKY 286
Query: 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLV 320
+ QY+WL+ +L KV+R +TPWL+VL+H PWYNS H EG+ M + EP VD+V
Sbjct: 287 TPQYKWLEKELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVV 346
Query: 321 LAGHVHAYERSIRVNN-------G--KP--DPCGAVYITIGDGGNKEGLA 359
AGHVHAYERS RV+N G P D VYITIGDGG EGLA
Sbjct: 347 FAGHVHAYERSERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLA 396
|
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| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 134/303 (44%), Positives = 182/303 (60%)
Query: 84 AEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFEFKTPPA---QFPIT 138
A + SYR+ Y SG +HH I LE+DT Y Y G + +F F TPP P T
Sbjct: 99 AHASTKSYRFYDYSSGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYT 158
Query: 139 FAVAGDLGQTGWTKSTLDH-IGQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLA 193
F + GDLGQT + TL H + K L GDLSYAD + Q +WDT+G ++P A
Sbjct: 159 FGIIGDLGQTYASNETLYHYMSNPKGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCA 218
Query: 194 SARPWMVTQGNHEKESIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML 251
+ +P++ GNHE + +P I + AF+ Y R+ ++ S S S L+YS A AH+I+L
Sbjct: 219 AYQPFIFAAGNHEIDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVL 278
Query: 252 GSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311
SY+ Y +Y+ QY WL+ +L V+R++TPWL+V++H PWYNSN H EG+ M + E
Sbjct: 279 SSYSAYGKYTPQYIWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESW 338
Query: 312 LYAASVDLVLAGHVHAYERSIRVNNGK---------P--DPCGAVYITIGDGGNKEGLAR 360
L + VDLVL+GHVHAYERS R++N K P DP +YITIGDGGN EG+A
Sbjct: 339 LVNSKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIAN 398
Query: 361 KYV 363
+V
Sbjct: 399 SFV 401
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| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 133/298 (44%), Positives = 182/298 (61%)
Query: 88 STSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQGP--EFEFKTPPA---QFPITFAVA 142
++SYR+ Y SG +HH I LE+DT Y Y G G +F F +PP P TF +
Sbjct: 103 TSSYRFYDYTSGFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGII 162
Query: 143 GDLGQTGWTKSTLDH-IGQCKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASARP 197
GDLGQT + TL H + K L PGDLSYAD + Q +WD++G V+P A+ +
Sbjct: 163 GDLGQTLASNETLYHYMSNPKGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQT 222
Query: 198 WMVTQGNHEKESIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA 255
++ GNHE + +P I + AF+ Y R+ ++ S S S L+YS A AH+I+L SY+
Sbjct: 223 FIYAAGNHEIDFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYS 282
Query: 256 DYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA 315
Y +Y+ QY WL+ +L KV+R++TPWL+V++H PWYNSN H EG+ M A+ E +
Sbjct: 283 AYGKYTPQYVWLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNS 342
Query: 316 SVDLVLAGHVHAYERSIRVNNGK---------P--DPCGAVYITIGDGGNKEGLARKY 362
VDLVL+GHVH+YERS RV+N K P DP +YITIGDGGN EG+A +
Sbjct: 343 KVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSF 400
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| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 142/346 (41%), Positives = 194/346 (56%)
Query: 43 PQQVHISLAGDSHMR---VTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSG 99
PQQVHI+ GD + V+W+T + + V Y A G++ +Y++ Y SG
Sbjct: 59 PQQVHIT-QGDVEGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSG 117
Query: 100 KIHHTVIGPLEHDTVYFY--RCGRQGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKST 154
IHH I LE+DT Y+Y G+ +F F TPP P TF + GDLGQ+ + T
Sbjct: 118 FIHHCPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNIT 177
Query: 155 LDHI--GQCKYDVHLLPGDLSYAD-YMQH---RWDTFGELVQPLASARPWMVTQGNHEKE 208
L H K L GD+SYAD Y H RWD++G + + +PW+ T GNHE +
Sbjct: 178 LTHYENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELD 237
Query: 209 SIPLIMD--AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRW 266
P I + F+ + R++ P+ SGS +YS A++I+L SY+ Y +Y+ QY+W
Sbjct: 238 FAPEIGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQW 297
Query: 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326
L+++ KV+R +TPWL+VL+H PWYNS + H EG+ M + E VD+V AGHVH
Sbjct: 298 LEEEFPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVH 357
Query: 327 AYERSIRVNN-------G--KP--DPCGAVYITIGDGGNKEGLARK 361
AYERS RV+N G P D VYITIGDGGN EGLA K
Sbjct: 358 AYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATK 403
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LJU7 | PPA18_ARATH | 3, ., 1, ., 3, ., 2 | 0.7722 | 0.9523 | 0.8237 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_XIII0422 | hypothetical protein (432 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 378 | |||
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-165 | |
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 3e-91 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 6e-16 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 7e-08 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 8e-08 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 3e-06 | |
| cd07395 | 262 | cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related | 0.003 | |
| cd07402 | 240 | cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and | 0.004 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 469 bits (1209), Expect = e-165
Identities = 217/364 (59%), Positives = 262/364 (71%), Gaps = 8/364 (2%)
Query: 7 LTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDE 65
L A + I Y RP R+ L P + +HP QVHISL G MR++WIT D
Sbjct: 7 LVAILLIVLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS 66
Query: 66 SSPSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDTVYFYRCG--RQ 122
PSVV YGT G Y A G S+SY YL YRSG+I+ VIGPL+ +TVY+Y+CG
Sbjct: 67 IPPSVV-YGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSS 125
Query: 123 GPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRW 182
EF F+TPP++FPI FAV+GDLG + WTKSTL+H+ + YDV +LPGDLSYA++ Q W
Sbjct: 126 TQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLW 185
Query: 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIM-DAFQSYNARWKMPFEESGSNSNLYYSF 241
DTFG LVQPLAS RPWMVT GNHE E IP++ + F +YNARW+MPFEESGS SNLYYSF
Sbjct: 186 DTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSF 245
Query: 242 DVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG-- 299
+V G H+IMLGSY D++ S+QY+WL+++L K+DRK TPW++ ++H PWYNSNEAHQG
Sbjct: 246 NVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEK 305
Query: 300 EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLA 359
E GM ME LLY A VDLV AGHVHAYER RV GK D CG VYITIGDGGN+EGLA
Sbjct: 306 ESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLA 365
Query: 360 RKYV 363
KY+
Sbjct: 366 TKYI 369
|
Length = 427 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 275 bits (706), Expect = 3e-91
Identities = 112/247 (45%), Positives = 142/247 (57%), Gaps = 19/247 (7%)
Query: 134 QFPITFAVAGDLGQ-TGWTKSTLDHIGQ--CKYDVHLLPGDLSYADY--MQHRWDTFGEL 188
P FAV GD+GQ T + +TLDH+ + YD L GDL+YAD RWDTF
Sbjct: 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQ 61
Query: 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHL 248
++PLAS P+MVT GNHE + +++ R++ P SGS SNL+YSFDV H
Sbjct: 62 IEPLASYVPYMVTPGNHEADYNFSF-YKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHF 120
Query: 249 IMLGSYADY---DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDG 303
+ L + D+ S QY WL+ DL+KVDR KTPW++V+ H P Y SN H EG+
Sbjct: 121 VSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEK 180
Query: 304 MMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP--------DPCGAVYITIGDGGNK 355
M A +E L Y VDLVL+GHVHAYER+ V NG +P G V+I IG GGN
Sbjct: 181 MRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGND 240
Query: 356 EGLARKY 362
EGL
Sbjct: 241 EGLDPFS 247
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 74.8 bits (183), Expect = 6e-16
Identities = 38/195 (19%), Positives = 58/195 (29%), Gaps = 14/195 (7%)
Query: 138 TFAVAGDL----GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA 193
V GDL L+ +G+ K D+ L GDL L
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGP-PSLEVLALLFALKLK 59
Query: 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
+ P + +GNH+ Y +P+ +I L S
Sbjct: 60 APGPVYLVRGNHD---FDSGNSELGFYLECAGLPY------VLGNGDVSNGTVEIIGLSS 110
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
+L+ + ++L+H P S ++ +E LL
Sbjct: 111 LYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEALEDLLK 170
Query: 314 AASVDLVLAGHVHAY 328
VDLVL GH H
Sbjct: 171 DNGVDLVLRGHTHVP 185
|
This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 7e-08
Identities = 42/184 (22%), Positives = 61/184 (33%), Gaps = 47/184 (25%)
Query: 197 PWMVTQGNHEKESIPLIMDAF--QSYNARWKMPFEESGSNSNLYYSFDVAG------AHL 248
PW + GNH+ + + + RW MP YY
Sbjct: 72 PWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEF 123
Query: 249 IML------GSYADYD---------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293
IM+ G+ D +Q WL+ L+ W +V+ H P Y S
Sbjct: 124 IMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPIY-S 179
Query: 294 NEAHQGEGDGMMAIME--PLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351
+ H G + PLL VD L+GH H + K D G ++ G
Sbjct: 180 SGEH---GPTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHI------KDDGSGTSFVVSG- 229
Query: 352 GGNK 355
G+K
Sbjct: 230 AGSK 233
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 8e-08
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 247 HLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWL-------LVLLHVPWYNSNEAHQG 299
+++LG ++ L L+ + P ++L H P Y+ +
Sbjct: 29 FVLVLGDLVGDGPDPEE--VLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSP 86
Query: 300 EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP 339
+ D + LL VDLVL+GH H YER G
Sbjct: 87 DEDPGSEALLELLEKYGVDLVLSGHTHVYERREPDGGGTL 126
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Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 3e-06
Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 18/180 (10%)
Query: 153 STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212
+ L I Q K D+ ++ GDL+ + EL+ L P +V GNH+ +
Sbjct: 24 ALLAAIEQLKPDLLVVTGDLTNDGEPEEY-RRLKELLARLELPAPVIVVPGNHD---ARV 79
Query: 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS-YADYDE---YSDQYRWLK 268
+ S + G +I L S ++Q WL+
Sbjct: 80 VNGEAFSDQFFNRYAVLVGA--------CSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLE 131
Query: 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIM--EPLLYAASVDLVLAGHVH 326
+ L+ + ++VL H P + + + + V LVL+GH+H
Sbjct: 132 EALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIH 191
|
Length = 301 |
| >gnl|CDD|163638 cd07395, MPP_CSTP1, Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 27/143 (18%)
Query: 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--Y 254
P + GNH+ + P ++ + Y + G + Y+SF V G I+L S +
Sbjct: 88 PLVCVCGNHDVGNTP-TEESIKDYRDVF-------GDD---YFSFWVGGVFFIVLNSQLF 136
Query: 255 AD----YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGM----MA 306
D + Q WL++ L ++V H+PW+ + E D +
Sbjct: 137 FDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDP---DEEDSYFNIPKS 193
Query: 307 IMEPLL---YAASVDLVLAGHVH 326
+ +PLL A V V +GH H
Sbjct: 194 VRKPLLDKFKKAGVKAVFSGHYH 216
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 262 |
| >gnl|CDD|163645 cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 46/191 (24%), Positives = 66/191 (34%), Gaps = 46/191 (24%)
Query: 154 TLDHIGQCKYDVHLL--PGDLSYADYMQHRWDTFGELVQPLASAR-PWMVTQGNHEKESI 210
L HI L+ GDL D +++ L + LA+ P + GNH+
Sbjct: 30 VLAHINALHPRPDLVLVTGDL--TD--DGSPESYERLRELLAALPIPVYLLPGNHDD--- 82
Query: 211 PLIM-DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIML---------GSYADYDEY 260
M F E + + Y D+ G LI+L G
Sbjct: 83 RAAMRAVFP----------ELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCA---- 128
Query: 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM-----AIMEPLLYAA 315
Q WL+ L++ K T LV LH P + A D + A+ L
Sbjct: 129 -AQLDWLEAALAEAPDKPT---LVFLHHPPFPVGIAWM---DAIGLRNAEALAAVLARHP 181
Query: 316 SVDLVLAGHVH 326
+V +L GHVH
Sbjct: 182 NVRAILCGHVH 192
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GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 240 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.97 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 99.97 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 99.97 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.94 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.93 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.92 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 99.91 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.91 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.91 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.9 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.88 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.87 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.8 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.79 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.76 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.75 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.75 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.74 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.74 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.72 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.71 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.7 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.67 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.66 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.64 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.62 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.61 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.59 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.48 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.46 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.44 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.44 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.44 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 99.41 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.31 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.3 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 99.3 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.29 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.28 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.25 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 99.23 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 99.22 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 99.16 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 99.15 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.12 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 99.1 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 99.1 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 99.05 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 99.01 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.96 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.96 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.9 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 98.88 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.85 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.83 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.81 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.77 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.75 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.75 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.71 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.65 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.6 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.6 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.57 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.57 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.52 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 98.51 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.48 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.48 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.45 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.45 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.45 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.41 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 98.37 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.36 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 98.35 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 98.34 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.34 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 98.34 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 98.23 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 98.21 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 98.06 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.98 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.94 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 97.86 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.8 | |
| PHA02239 | 235 | putative protein phosphatase | 97.79 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.78 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.78 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.7 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 97.59 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.56 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 97.56 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.54 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.46 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 97.45 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 97.42 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 97.4 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.37 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 97.36 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 97.34 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 97.32 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 97.27 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 97.17 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 97.05 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 97.01 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 96.99 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.89 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.87 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.67 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 96.27 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 96.17 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 96.04 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.99 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 95.97 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 95.57 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.3 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 95.3 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 95.25 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 95.18 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 95.07 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 94.92 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 94.88 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 94.87 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 94.79 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 94.07 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 93.67 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 93.58 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 93.53 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 93.23 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 92.29 | |
| KOG3513 | 1051 | consensus Neural cell adhesion molecule L1 [Signal | 89.7 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 85.28 | |
| PF08139 | 25 | LPAM_1: Prokaryotic membrane lipoprotein lipid att | 84.91 | |
| PRK13792 | 127 | lysozyme inhibitor; Provisional | 82.72 | |
| KOG2476 | 528 | consensus Uncharacterized conserved protein [Funct | 80.08 |
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=529.44 Aligned_cols=364 Identities=59% Similarity=1.079 Sum_probs=310.6
Q ss_pred CcchhhHHHHHHHhhcCCCCccccCCCCCCccc-CCCCCCCCCCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCC
Q 017051 1 MELKFVLTAFVFISATVTTAEYIRPQPRRTLEF-PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGG 79 (378)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~ 79 (378)
|.+-|.++.++++....++.+|+|++|+..+.+ +.+......|+||||++++.++|+|+|.|.+. ..+.|+||++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qvhls~~~~~~m~V~W~T~~~-~~~~V~yG~~~~~ 79 (427)
T PLN02533 1 MVKVLGLVAILLIVLAGNVLSYDRPGTRKNLVIHPDNEDDPTHPDQVHISLVGPDKMRISWITQDS-IPPSVVYGTVSGK 79 (427)
T ss_pred ChhhHHHHHHHHhhhccCcccccCCCccccccccccCCCCCCCCceEEEEEcCCCeEEEEEECCCC-CCCEEEEecCCCC
Confidence 445555555566666667799999998875543 23457888999999999999999999999964 5689999999888
Q ss_pred CCeeEEeeeeEEeee-eeccCeEEEEEECCCCCCCEEEEEeCc--cCceeEEECCCCCCCeEEEEEcccCCCCChHHHHH
Q 017051 80 YNCGAEGESTSYRYL-FYRSGKIHHTVIGPLEHDTVYFYRCGR--QGPEFEFKTPPAQFPITFAVAGDLGQTGWTKSTLD 156 (378)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~~~h~~~l~~L~p~t~Y~Y~v~~--~s~~~~F~t~p~~~~~~f~~~gD~~~~~~~~~~~~ 156 (378)
++..+.|.+++|.+. ...++++|+|+|+||+|+|+|+|||+. ++++++|+|+|...+++|+++||+|...+...+++
T Consensus 80 l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~~~~~f~v~GDlG~~~~~~~tl~ 159 (427)
T PLN02533 80 YEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSKFPIKFAVSGDLGTSEWTKSTLE 159 (427)
T ss_pred CcceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCCCCeEEEEEEeCCCCcccHHHHH
Confidence 888888887777642 246789999999999999999999985 47889999999878999999999998777778889
Q ss_pred HhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcc-cchhhhchhcccCCCCCCCCCC
Q 017051 157 HIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARWKMPFEESGSNS 235 (378)
Q Consensus 157 ~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~ 235 (378)
.+.+.+|||||++||++|++..+..|+.|++.++++.+.+|+|+++||||....+.. ...+..|.++|.+|.+..+...
T Consensus 160 ~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~ 239 (427)
T PLN02533 160 HVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTS 239 (427)
T ss_pred HHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCC
Confidence 998899999999999999888788999999999999888999999999999643211 2467788899999986655567
Q ss_pred CceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCC--chHHHHHHHHHHH
Q 017051 236 NLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE--GDGMMAIMEPLLY 313 (378)
Q Consensus 236 ~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~ 313 (378)
+.||+|++|++|||+||++.++....+|++||+++|++++++++||+||++|+|+|++...+.+. ...+++.|+++|.
T Consensus 240 ~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~ 319 (427)
T PLN02533 240 NLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLY 319 (427)
T ss_pred CceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHH
Confidence 89999999999999999998887789999999999999887778999999999999876544332 2346789999999
Q ss_pred hcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCcccccccc
Q 017051 314 AASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLT 365 (378)
Q Consensus 314 ~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p 365 (378)
+++||++|+||+|.|+|+.|+++++.+++|++||++|+||+.++....+.+|
T Consensus 320 ~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~~~~~ 371 (427)
T PLN02533 320 KARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATKYIDP 371 (427)
T ss_pred HhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccccCCC
Confidence 9999999999999999999999999999999999999999999876666444
|
|
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-64 Score=470.96 Aligned_cols=330 Identities=42% Similarity=0.664 Sum_probs=279.8
Q ss_pred CCCCCCceEEEEecC-CCeEEEEEEcCCCCCCcEEEEeccCCCC-----CeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAG-DSHMRVTWITDDESSPSVVEYGTSPGGY-----NCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~-~~~~~i~W~t~~~~~~~~v~y~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.....|+||||++++ .++|+|+|.|.+. ....|+|+...... +..+.+.+..+.......+++|+|+|++|+|
T Consensus 40 ~~~~~peQvhlS~~~~~~~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~ 118 (452)
T KOG1378|consen 40 SVVNSPEQVHLSFTDNLNEMRVSWVTGDG-EENVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSGYIHDAVMKNLEP 118 (452)
T ss_pred ccCCCCCeEEEeccCCCCcEEEEEeCCCC-CCceEEEeecCCCccccccccceEEEecccccccceeeeEeeeeecCCCC
Confidence 566789999999998 5599999999964 44899999775542 2233334334444346889999999999999
Q ss_pred CCEEEEEeCcc---CceeEEECCCC-CCCeEEEEEcccCCCCChHHHHHHhhc-CCCcEEEeccccccccchh-hhHHHH
Q 017051 112 DTVYFYRCGRQ---GPEFEFKTPPA-QFPITFAVAGDLGQTGWTKSTLDHIGQ-CKYDVHLLPGDLSYADYMQ-HRWDTF 185 (378)
Q Consensus 112 ~t~Y~Y~v~~~---s~~~~F~t~p~-~~~~~f~~~gD~~~~~~~~~~~~~i~~-~~~d~vi~~GDl~~~~~~~-~~~~~~ 185 (378)
+|+|+|+||+. |++|+|+|+|. ..+.+|+++||+|.......++..... .++|+|||+|||+|+.+.. .+||.|
T Consensus 119 ~t~YyY~~Gs~~~wS~~f~F~t~p~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f 198 (452)
T KOG1378|consen 119 NTRYYYQVGSDLKWSEIFSFKTPPGQDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEF 198 (452)
T ss_pred CceEEEEeCCCCCcccceEeECCCCccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHH
Confidence 99999999974 79999999995 589999999999988776666666654 4699999999999999887 599999
Q ss_pred HHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC--CCcHHH
Q 017051 186 GELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY--DEYSDQ 263 (378)
Q Consensus 186 ~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~--~~~~~Q 263 (378)
+++++++++.+|+|++.||||.+..+. ..|..|.+||.+|.+..+...+.||||++|++|||+|+|+.++ ....+|
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~--~~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~Q 276 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQ--PCFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQ 276 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCc--ccccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchH
Confidence 999999999999999999999976544 2689999999999987777778999999999999999998875 346899
Q ss_pred HHHHHHHhhhccCCCCCeEEEEeccccccCCCC-CCCCch--HHHHHHHHHHHhcCCcEEEecCccccceeecccCCCc-
Q 017051 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA-HQGEGD--GMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP- 339 (378)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~~~~~--~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~- 339 (378)
++||+++|++++|+++||+||+.|.|+|++... +..++. .++..|+++|.+++||++|.||.|.|||++|++|.+.
T Consensus 277 Y~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~ 356 (452)
T KOG1378|consen 277 YQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCG 356 (452)
T ss_pred HHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhcceee
Confidence 999999999999865899999999999998874 444444 6788999999999999999999999999999998764
Q ss_pred ---------CCCccEEEEeCCCCCCCCcccccc-ccccCce
Q 017051 340 ---------DPCGAVYITIGDGGNKEGLARKYV-LTYRNIF 370 (378)
Q Consensus 340 ---------~~~g~~yiv~G~gG~~~~~~~~~~-~p~~~~~ 370 (378)
++++|+||++|+||+.++....+. .|.+..|
T Consensus 357 ~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~ 397 (452)
T KOG1378|consen 357 TGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAF 397 (452)
T ss_pred ccCCcccccCCCCCEEEEEccCCcccccCcccCCCCccccc
Confidence 789999999999999999887764 5554443
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=302.83 Aligned_cols=225 Identities=49% Similarity=0.826 Sum_probs=177.0
Q ss_pred CCCeEEEEEcccCCC-CChHHHHHHhhc--CCCcEEEeccccccccchh--hhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 134 QFPITFAVAGDLGQT-GWTKSTLDHIGQ--CKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~-~~~~~~~~~i~~--~~~d~vi~~GDl~~~~~~~--~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
+.++||+++||+|.. .....+++++.+ .+|||||++||++|+.+.. .+|+.|++.++++...+|+++++||||..
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 81 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPYMVTPGNHEAD 81 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCcEEcCcccccc
Confidence 468999999999863 445778888865 7999999999999877654 78999999999998889999999999995
Q ss_pred CCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC---CCcHHHHHHHHHHhhhccCCCCCeEEEE
Q 017051 209 SIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY---DEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (378)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~---~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (378)
..... .....+..++.++........+.||+|++|+++||+|||.... ....+|++||+++|+++.+++.+|+||+
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~~iv~ 160 (294)
T cd00839 82 YNFSF-YKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVM 160 (294)
T ss_pred cCCCC-cccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCeEEEE
Confidence 43221 0011111112233323333457899999999999999998654 4568999999999999866567899999
Q ss_pred eccccccCCCCCCC--CchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC--------cCCCccEEEEeCCCCCC
Q 017051 286 LHVPWYNSNEAHQG--EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--------PDPCGAVYITIGDGGNK 355 (378)
Q Consensus 286 ~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~--------~~~~g~~yiv~G~gG~~ 355 (378)
+|+|+|+....... .....++.|.++|++++|+++|+||+|.|+|+.|+++++ .+++|++||++|+||+.
T Consensus 161 ~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~~~~~~~g~~yiv~G~~G~~ 240 (294)
T cd00839 161 GHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCNPYSNPKGPVHIVIGAGGND 240 (294)
T ss_pred eccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccccccCCCccEEEEECCCccc
Confidence 99999987654322 234578999999999999999999999999999998765 46789999999999987
Q ss_pred CCcc
Q 017051 356 EGLA 359 (378)
Q Consensus 356 ~~~~ 359 (378)
....
T Consensus 241 ~~~~ 244 (294)
T cd00839 241 EGLD 244 (294)
T ss_pred cCcC
Confidence 6543
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=235.17 Aligned_cols=220 Identities=20% Similarity=0.294 Sum_probs=159.0
Q ss_pred CCCeEEEEEcccCCCC---C--------------hHHHHHHhhcC--CCcEEEeccccccccchh----hhHHHHHHhhH
Q 017051 134 QFPITFAVAGDLGQTG---W--------------TKSTLDHIGQC--KYDVHLLPGDLSYADYMQ----HRWDTFGELVQ 190 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~---~--------------~~~~~~~i~~~--~~d~vi~~GDl~~~~~~~----~~~~~~~~~~~ 190 (378)
+++++|+++||+|.+. . .+.+++.+.+. +||+||++||+++.+... .+|+.+.+.++
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 3689999999998763 1 12344555554 999999999999876542 34556666666
Q ss_pred hhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC------CCcHHHH
Q 017051 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY------DEYSDQY 264 (378)
Q Consensus 191 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~------~~~~~Q~ 264 (378)
.+...+|+++++||||....+. ......|...| +..+|+|++++++||+|||.... ....+|+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~-~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ql 150 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT-EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQD 150 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC-hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHHH
Confidence 6655699999999999953221 12233333333 24688999999999999995322 1247899
Q ss_pred HHHHHHhhhccCCCCCeEEEEeccccccCCCCCC----CCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcC
Q 017051 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ----GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPD 340 (378)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~ 340 (378)
+||+++|+++.+.+.+++||++|+|++....... ......++.|.++|++++|+++||||+|.+.+.. +
T Consensus 151 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~--~----- 223 (262)
T cd07395 151 VWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR--Y----- 223 (262)
T ss_pred HHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE--E-----
Confidence 9999999998633556899999999986443211 1123467899999999999999999999987643 2
Q ss_pred CCccEEEEeCCCCCCCCccccccccccCceeccccc
Q 017051 341 PCGAVYITIGDGGNKEGLARKYVLTYRNIFELSNSN 376 (378)
Q Consensus 341 ~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~~~ 376 (378)
.|+.|+++++.|...+ ...|+|++|+++.+.
T Consensus 224 -~g~~~~~~~~~~~~~~----~~~~g~~~~~v~~~~ 254 (262)
T cd07395 224 -GGLEMVVTSAIGAQLG----NDKSGLRIVKVTEDK 254 (262)
T ss_pred -CCEEEEEcCceecccC----CCCCCcEEEEECCCc
Confidence 4788888888776433 246999999997654
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=241.01 Aligned_cols=223 Identities=19% Similarity=0.267 Sum_probs=155.0
Q ss_pred CCCeEEEEEcccCCCCChHHHHHH-h----hcCCCcEEEeccccccccch---hhhHHH-HHHhhHhhh--hCCceeecC
Q 017051 134 QFPITFAVAGDLGQTGWTKSTLDH-I----GQCKYDVHLLPGDLSYADYM---QHRWDT-FGELVQPLA--SARPWMVTQ 202 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~~~~-i----~~~~~d~vi~~GDl~~~~~~---~~~~~~-~~~~~~~l~--~~~P~~~v~ 202 (378)
...++|+++||+|.+...+..+++ | ++.++||||.+||+.+.+-. +.+|+. |-+...... -.+||++|+
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vL 103 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVL 103 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeC
Confidence 678999999999976555544433 2 36799999999999843222 456765 333333322 358999999
Q ss_pred CCCccCCCCcccch-hh------------------hchhcccCCCCCCCCCCCceEEE----Ee-------------CCE
Q 017051 203 GNHEKESIPLIMDA-FQ------------------SYNARWKMPFEESGSNSNLYYSF----DV-------------AGA 246 (378)
Q Consensus 203 GNHD~~~~~~~~~~-~~------------------~~~~~~~~p~~~~~~~~~~~ysf----~~-------------g~v 246 (378)
||||+.++...+-. +. ....+|.||. .||.+ .. ..+
T Consensus 104 GNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~~~~v 175 (394)
T PTZ00422 104 GQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHKDMSV 175 (394)
T ss_pred CcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCCCCEE
Confidence 99999654332111 10 1125677774 67754 21 128
Q ss_pred EEEEEcCcCC-----CC-CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEE
Q 017051 247 HLIMLGSYAD-----YD-EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLV 320 (378)
Q Consensus 247 ~fi~ldt~~~-----~~-~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlv 320 (378)
.||++||... +. ....|++||+++|+.+.+ .++|+||++|||+|+++.. +....++..|+|+|++|+||++
T Consensus 176 ~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~k-~a~WkIVvGHhPIySsG~h--g~~~~L~~~L~PLL~ky~VdlY 252 (394)
T PTZ00422 176 AFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAPK-IADYIIVVGDKPIYSSGSS--KGDSYLSYYLLPLLKDAQVDLY 252 (394)
T ss_pred EEEEEECchhcccCCccccCHHHHHHHHHHHHhhcc-CCCeEEEEecCceeecCCC--CCCHHHHHHHHHHHHHcCcCEE
Confidence 9999999521 11 236889999999976543 6789999999999998752 2334578899999999999999
Q ss_pred EecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccc------cc--cccccCceecccc
Q 017051 321 LAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR------KY--VLTYRNIFELSNS 375 (378)
Q Consensus 321 l~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~------~~--~~p~~~~~e~~~~ 375 (378)
|+||+|.+|+..+ +++.||++|+||+..+... .| ..+++..+|+..+
T Consensus 253 isGHDH~lq~i~~--------~gt~yIvSGaGs~~~~~~~~~~~~s~F~~~~~GF~~~~l~~~ 307 (394)
T PTZ00422 253 ISGYDRNMEVLTD--------EGTAHINCGSGGNSGRKSIMKNSKSLFYSEDIGFCIHELNAE 307 (394)
T ss_pred EEccccceEEecC--------CCceEEEeCccccccCCCCCCCCCcceecCCCCEEEEEEecC
Confidence 9999999999752 5899999999987544211 11 3456666766554
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=239.02 Aligned_cols=203 Identities=24% Similarity=0.406 Sum_probs=143.6
Q ss_pred eEEEEEcccCCC-CChH-HHH---H-HhhcCCCcEEEeccccccccch----hhhH-HHHHHhhHhhhhCCceeecCCCC
Q 017051 137 ITFAVAGDLGQT-GWTK-STL---D-HIGQCKYDVHLLPGDLSYADYM----QHRW-DTFGELVQPLASARPWMVTQGNH 205 (378)
Q Consensus 137 ~~f~~~gD~~~~-~~~~-~~~---~-~i~~~~~d~vi~~GDl~~~~~~----~~~~-~~~~~~~~~l~~~~P~~~v~GNH 205 (378)
++|+++||+|.. ...+ .+. . .+++.+|||||++||++|.++. ...| +.|...+..+...+|+++++|||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 489999999975 2222 222 2 2335799999999999987653 1233 33445555444569999999999
Q ss_pred ccCCCCcccchhhh--chhcccCCCCCCCCCCCceEEEEeC------CEEEEEEcCcCCC---------------CCcHH
Q 017051 206 EKESIPLIMDAFQS--YNARWKMPFEESGSNSNLYYSFDVA------GAHLIMLGSYADY---------------DEYSD 262 (378)
Q Consensus 206 D~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~ysf~~g------~v~fi~ldt~~~~---------------~~~~~ 262 (378)
|..........+.. +..+|.+| ..||+|+++ +++||+|||.... ....+
T Consensus 81 D~~~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~ 152 (277)
T cd07378 81 DYSGNVSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEE 152 (277)
T ss_pred ccCCCchheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHHH
Confidence 99632211111111 12223233 579999998 7999999996421 13589
Q ss_pred HHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCC
Q 017051 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPC 342 (378)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~ 342 (378)
|++||+++|+++. .+|+||++|+|+++..... .....++.|.+++++++|+++|+||.|.+++..+. ..
T Consensus 153 Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~------~~ 221 (277)
T cd07378 153 QLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDD------GS 221 (277)
T ss_pred HHHHHHHHHHhcC---CCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecC------CC
Confidence 9999999999874 3799999999998765322 22456899999999999999999999999887641 25
Q ss_pred ccEEEEeCCCCCCCCc
Q 017051 343 GAVYITIGDGGNKEGL 358 (378)
Q Consensus 343 g~~yiv~G~gG~~~~~ 358 (378)
++.||++|+||...+.
T Consensus 222 ~~~~i~~G~~~~~~~~ 237 (277)
T cd07378 222 GTSFVVSGAGSKARPS 237 (277)
T ss_pred CcEEEEeCCCcccCCC
Confidence 8999999998875443
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-25 Score=202.91 Aligned_cols=209 Identities=17% Similarity=0.182 Sum_probs=141.8
Q ss_pred eEEEEEcccCCCCC--------------hHHHHHHhhcCCCcEEEeccccccccch--hhhHHHHHHhhHhhhhCCceee
Q 017051 137 ITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~~~--------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~ 200 (378)
|||+++||+|.... ..++++.+++.+||+||++||+++.+.. ...|+.+.+.+..+ .+|+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~~~ 78 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPVHH 78 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCEEE
Confidence 69999999995431 1345666777789999999999975542 13455555555544 389999
Q ss_pred cCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCC------------------------
Q 017051 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------------------------ 256 (378)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~------------------------ 256 (378)
++||||...... . .+...+ ....+..||+|++++++||+||+...
T Consensus 79 v~GNHD~~~~~~---~--~~~~~~------~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (267)
T cd07396 79 VLGNHDLYNPSR---E--YLLLYT------LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNSNLGLY 147 (267)
T ss_pred ecCccccccccH---h--hhhccc------ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhchhhhh
Confidence 999999953211 0 010001 01124579999999999999999521
Q ss_pred ----------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCc
Q 017051 257 ----------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHV 325 (378)
Q Consensus 257 ----------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~ 325 (378)
.....+|++||+++|+++.. +..++||++|+|++...... ......++.+.++++++ +|+++|+||+
T Consensus 148 ~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v~~GH~ 225 (267)
T cd07396 148 LSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKACISGHD 225 (267)
T ss_pred ccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEEEcCCc
Confidence 01247999999999998754 22458999999987654311 11112357889999996 7999999999
Q ss_pred cccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceecc
Q 017051 326 HAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELS 373 (378)
Q Consensus 326 H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~ 373 (378)
|.+.... .+|+.|+++|+-+.. +. .-|.+.++++-
T Consensus 226 H~~~~~~--------~~gi~~~~~~a~~~~-~~----~~~~~~~~~~~ 260 (267)
T cd07396 226 HEGGYAQ--------RHGIHFLTLEGMVET-PP----ESNAFGVVIVY 260 (267)
T ss_pred CCCCccc--------cCCeeEEEechhhcC-CC----CCCceEEEEEe
Confidence 9986443 258999998875543 21 23566666653
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-25 Score=197.50 Aligned_cols=209 Identities=23% Similarity=0.264 Sum_probs=146.3
Q ss_pred EEEEEcccCCCCC-------------hHHHHHHhhcC--CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecC
Q 017051 138 TFAVAGDLGQTGW-------------TKSTLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQ 202 (378)
Q Consensus 138 ~f~~~gD~~~~~~-------------~~~~~~~i~~~--~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 202 (378)
||+++||+|.+.. .+++++.+++. +||+||++||+++.+. ...|+.+.+.++.+ .+|++.++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~~--~~p~~~v~ 77 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-PESYERLRELLAAL--PIPVYLLP 77 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-HHHHHHHHHHHhhc--CCCEEEeC
Confidence 6999999997642 13455555555 9999999999998654 34566666666665 58999999
Q ss_pred CCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC----CCcHHHHHHHHHHhhhccCCC
Q 017051 203 GNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRKK 278 (378)
Q Consensus 203 GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~----~~~~~Q~~WL~~~L~~~~~~~ 278 (378)
||||... .+ ...|..... .....+|+|++++++||+||+.... ....+|++||++.|++..
T Consensus 78 GNHD~~~------~~---~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~~~~--- 142 (240)
T cd07402 78 GNHDDRA------AM---RAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALAEAP--- 142 (240)
T ss_pred CCCCCHH------HH---HHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHHhCC---
Confidence 9999831 11 122211100 1235788999999999999986432 124789999999999874
Q ss_pred CCeEEEEeccccccCCCCCC-CCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCC
Q 017051 279 TPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKE 356 (378)
Q Consensus 279 ~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~ 356 (378)
.+++|+++|+|++....... ......++.+.++++++ +++++|+||+|...... .+|+.++++|+.|..-
T Consensus 143 ~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs~~~~~ 214 (240)
T cd07402 143 DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--------WGGIPLLTAPSTCHQF 214 (240)
T ss_pred CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--------ECCEEEEEcCcceeee
Confidence 23589999999876543111 11112368999999999 99999999999975544 2588899999877654
Q ss_pred Ccccc----c-cccccCceec
Q 017051 357 GLARK----Y-VLTYRNIFEL 372 (378)
Q Consensus 357 ~~~~~----~-~~p~~~~~e~ 372 (378)
..... . ..++|+.|.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~ 235 (240)
T cd07402 215 APDLDDFALDALAPGYRALSL 235 (240)
T ss_pred cCCCCcccccccCCCCcEEEE
Confidence 33322 1 3567777776
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=206.05 Aligned_cols=232 Identities=22% Similarity=0.293 Sum_probs=128.2
Q ss_pred eccCeEEEEEECCCCCCCEEEEEeCc-----cCceeEEECCCC--CCCeEEEEEcccCCCCChHHHHHHhhc-CCCcEEE
Q 017051 96 YRSGKIHHTVIGPLEHDTVYFYRCGR-----QGPEFEFKTPPA--QFPITFAVAGDLGQTGWTKSTLDHIGQ-CKYDVHL 167 (378)
Q Consensus 96 ~~~~~~h~~~l~~L~p~t~Y~Y~v~~-----~s~~~~F~t~p~--~~~~~f~~~gD~~~~~~~~~~~~~i~~-~~~d~vi 167 (378)
....+++++.++||+|+|+|+||+.. .+.+++|+|+|. ...+||+++||.+.......+++.+.+ .+|||+|
T Consensus 58 ~~~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 58 AERDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GGGTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-----EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred cCCCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCCCceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 46779999999999999999999875 267899999986 357999999999765445778888887 6999999
Q ss_pred eccccccccch--------------------hh-------hHHHH--HHhhHhhhhCCceeecCCCCccCCCCccc----
Q 017051 168 LPGDLSYADYM--------------------QH-------RWDTF--GELVQPLASARPWMVTQGNHEKESIPLIM---- 214 (378)
Q Consensus 168 ~~GDl~~~~~~--------------------~~-------~~~~~--~~~~~~l~~~~P~~~v~GNHD~~~~~~~~---- 214 (378)
|+||.+|.+.. .. .|..+ ...++.+.+++|+++++.+||+.++....
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~ 217 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAEN 217 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-ST
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCcccc
Confidence 99999998752 00 11111 12456677789999999999996432200
Q ss_pred -------------chhhhchhcccCCCCC---CCCCCCceEEEEeCC-EEEEEEcCcCCCC-------------------
Q 017051 215 -------------DAFQSYNARWKMPFEE---SGSNSNLYYSFDVAG-AHLIMLGSYADYD------------------- 258 (378)
Q Consensus 215 -------------~~~~~~~~~~~~p~~~---~~~~~~~~ysf~~g~-v~fi~ldt~~~~~------------------- 258 (378)
.+...|... +|... .......|++|.+|+ +.|++||+.....
T Consensus 218 ~~~~~~~~~~~~~~a~~ay~e~--~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~ 295 (453)
T PF09423_consen 218 HQDTSGDFQDRRRAAYQAYFEY--QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSR 295 (453)
T ss_dssp T---HHHHHHHHHHHHHHHHHH--S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT-
T ss_pred ccccccchHHHHHHHHHHHHhh--cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCcc
Confidence 111222222 23211 112346789999999 9999999953211
Q ss_pred --CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCC-----------CCCCchHHHHHHHHHHHhcCCc--EEEec
Q 017051 259 --EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA-----------HQGEGDGMMAIMEPLLYAASVD--LVLAG 323 (378)
Q Consensus 259 --~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-----------~~~~~~~~~~~l~~l~~~~~vd--lvl~G 323 (378)
.+.+|++||++.|++. .++|+|++.-.|+...... .++.....++.|.++|.+.++. ++|+|
T Consensus 296 ~mLG~~Q~~wL~~~L~~s---~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSG 372 (453)
T PF09423_consen 296 TMLGEEQWDWLEDWLASS---QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSG 372 (453)
T ss_dssp -SS-HHHHHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-
T ss_pred CcCCHHHHHHHHHHHhcC---CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEec
Confidence 2689999999999986 4789999988876443211 1112235789999999988764 88999
Q ss_pred Cccccceee
Q 017051 324 HVHAYERSI 332 (378)
Q Consensus 324 H~H~y~r~~ 332 (378)
+.|......
T Consensus 373 DvH~~~~~~ 381 (453)
T PF09423_consen 373 DVHASAASR 381 (453)
T ss_dssp SSSSEEEEE
T ss_pred Ccchheeee
Confidence 999876554
|
|
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-24 Score=183.82 Aligned_cols=208 Identities=23% Similarity=0.422 Sum_probs=138.2
Q ss_pred EECCCC-CCCeEEEEEcccCCCCC-hHHH-HHHh----hcCCCcEEEeccccccccchhhhHHH-HHHhhHhh----hhC
Q 017051 128 FKTPPA-QFPITFAVAGDLGQTGW-TKST-LDHI----GQCKYDVHLLPGDLSYADYMQHRWDT-FGELVQPL----ASA 195 (378)
Q Consensus 128 F~t~p~-~~~~~f~~~gD~~~~~~-~~~~-~~~i----~~~~~d~vi~~GDl~~~~~~~~~~~~-~~~~~~~l----~~~ 195 (378)
+.-|+. +++++|+++||+|.... .+.. ..++ ++.++||||-+||.+|.++...+.|. |...++.+ .-+
T Consensus 34 l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ 113 (336)
T KOG2679|consen 34 LYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ 113 (336)
T ss_pred hcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc
Confidence 444444 67899999999985443 2222 2222 36799999999999999887444332 11222222 113
Q ss_pred CceeecCCCCccCCCCcccch--hhhchhcccCCCCCCCCCCCceEE------EEeCCEEEEEEcCcC-------CCC--
Q 017051 196 RPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYS------FDVAGAHLIMLGSYA-------DYD-- 258 (378)
Q Consensus 196 ~P~~~v~GNHD~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~ys------f~~g~v~fi~ldt~~-------~~~-- 258 (378)
+||+.+.||||+.++...+-. +.....||..|. .||. +-.-++.++++|+.. ++.
T Consensus 114 kpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v 185 (336)
T KOG2679|consen 114 KPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGV 185 (336)
T ss_pred cchhhhccCccccCchhhhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheecccccccccccC
Confidence 799999999999765443222 444555665553 1221 111134444444421 111
Q ss_pred -----CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeec
Q 017051 259 -----EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR 333 (378)
Q Consensus 259 -----~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~ 333 (378)
....++.||+..|+++ .++|+||++|||+.+.+ +.+....+.+.|.|+|++++||++++||+|+.|....
T Consensus 186 ~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~ 260 (336)
T KOG2679|consen 186 LPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYINGHDHCLQHISS 260 (336)
T ss_pred ChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEecchhhhhhccC
Confidence 1267889999999996 67899999999998765 3456667899999999999999999999999886542
Q ss_pred ccCCCcCCCccEEEEeCCCCC
Q 017051 334 VNNGKPDPCGAVYITIGDGGN 354 (378)
Q Consensus 334 ~~~~~~~~~g~~yiv~G~gG~ 354 (378)
. ..++-|+++|+|..
T Consensus 261 ~------e~~iqf~tSGagSk 275 (336)
T KOG2679|consen 261 P------ESGIQFVTSGAGSK 275 (336)
T ss_pred C------CCCeeEEeeCCccc
Confidence 1 35677888887754
|
|
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=184.38 Aligned_cols=188 Identities=19% Similarity=0.214 Sum_probs=130.5
Q ss_pred eEEEEEcccCCCCCh---------HHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhh-hCCceeecCCCCc
Q 017051 137 ITFAVAGDLGQTGWT---------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNHE 206 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~---------~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD 206 (378)
|||++++|+|..... +.+++.+.+.+||+||++||+++.+....+|+.+.+.++.+. ..+|+++++||||
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD 80 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHD 80 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCc
Confidence 689999999875331 123344456789999999999987664568998888888887 4599999999999
Q ss_pred cCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEe
Q 017051 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (378)
. ++.+|+ ....+|++||++.|++.+. +++|+++
T Consensus 81 ~----------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~~~---~~~iv~~ 113 (214)
T cd07399 81 L----------------------------------------VLALEF----GPRDEVLQWANEVLKKHPD---RPAILTT 113 (214)
T ss_pred c----------------------------------------hhhCCC----CCCHHHHHHHHHHHHHCCC---CCEEEEe
Confidence 3 122222 1247999999999998632 3489999
Q ss_pred ccccccCCCCCCCC-----chHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccc
Q 017051 287 HVPWYNSNEAHQGE-----GDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 287 H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~ 360 (378)
|+|++......... .....+.|.++++++ +|+++||||.|.+.+.... ++....++++-+....-. ..
T Consensus 114 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~~--~~~~~g~~v~~~~~~~q~----~~ 187 (214)
T cd07399 114 HAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTLV--SVGDAGRTVHQMLADYQG----EP 187 (214)
T ss_pred cccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEEc--ccCCCCCEeeEEeecccC----CC
Confidence 99998654321111 122456788999999 7999999999998877642 112223455433222211 11
Q ss_pred cccccccCceecccccC
Q 017051 361 KYVLTYRNIFELSNSNK 377 (378)
Q Consensus 361 ~~~~p~~~~~e~~~~~~ 377 (378)
...+|++|+++++.++.
T Consensus 188 ~~g~~~~r~~~f~~~~~ 204 (214)
T cd07399 188 NGGNGFLRLLEFDPDNN 204 (214)
T ss_pred CCCcceEEEEEEecCCC
Confidence 23579999999988764
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-23 Score=189.49 Aligned_cols=220 Identities=19% Similarity=0.161 Sum_probs=140.7
Q ss_pred EECCCC-CCCeEEEEEcccCCCCC-------------hHHHHHHhhc--CCCcEEEeccccccccchhhhHHHHHHhhHh
Q 017051 128 FKTPPA-QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQP 191 (378)
Q Consensus 128 F~t~p~-~~~~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~ 191 (378)
.+++++ ..+++|++++|+|.... .+++++.+++ .+||+||++||+++.+. ...++.+.+.++.
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~-~~~~~~~~~~l~~ 83 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS-SEAYQHFAEGIAP 83 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC-HHHHHHHHHHHhh
Confidence 556655 57899999999996321 1345556543 47999999999998543 3456666666665
Q ss_pred hhhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC----CCcHHHHHHH
Q 017051 192 LASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWL 267 (378)
Q Consensus 192 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~----~~~~~Q~~WL 267 (378)
+ .+|++.++||||... .+..+.....+ ...++.+..++++||+||+.... ..+.+|++||
T Consensus 84 l--~~Pv~~v~GNHD~~~------~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~wL 147 (275)
T PRK11148 84 L--RKPCVWLPGNHDFQP------AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEWL 147 (275)
T ss_pred c--CCcEEEeCCCCCChH------HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHHH
Confidence 5 389999999999831 11111111111 12233344556999999995321 1357999999
Q ss_pred HHHhhhccCCCCCeEEEEeccccccCCCCCCC-CchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccE
Q 017051 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAV 345 (378)
Q Consensus 268 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~ 345 (378)
+++|++... +..||++|||+......+.. ......+.|.++++++ +|+++||||+|...... ..|+.
T Consensus 148 ~~~L~~~~~---~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~--------~~gi~ 216 (275)
T PRK11148 148 ERKLADAPE---RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD--------WNGRR 216 (275)
T ss_pred HHHHhhCCC---CCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce--------ECCEE
Confidence 999998743 23566677655443322111 1112457899999998 89999999999854322 25788
Q ss_pred EEEeCCCCCCCCc-ccc----ccccccCceecccc
Q 017051 346 YITIGDGGNKEGL-ARK----YVLTYRNIFELSNS 375 (378)
Q Consensus 346 yiv~G~gG~~~~~-~~~----~~~p~~~~~e~~~~ 375 (378)
++++++.+..-.. ... ...|+|+++++..+
T Consensus 217 ~~~~ps~~~q~~~~~~~~~~~~~~~g~~~~~l~~~ 251 (275)
T PRK11148 217 LLATPSTCVQFKPHCTNFTLDTVAPGWRELELHAD 251 (275)
T ss_pred EEEcCCCcCCcCCCCCccccccCCCcEEEEEEcCC
Confidence 8877776542111 111 23578999999644
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=184.65 Aligned_cols=185 Identities=17% Similarity=0.217 Sum_probs=123.6
Q ss_pred EEEEcccCCCCCh--------HHHHHHhhcCCCcEEEeccccccccc--------hhhhHHHHHHhhHhhhh--CCceee
Q 017051 139 FAVAGDLGQTGWT--------KSTLDHIGQCKYDVHLLPGDLSYADY--------MQHRWDTFGELVQPLAS--ARPWMV 200 (378)
Q Consensus 139 f~~~gD~~~~~~~--------~~~~~~i~~~~~d~vi~~GDl~~~~~--------~~~~~~~~~~~~~~l~~--~~P~~~ 200 (378)
|+.++|+|.+... ..+++.+++.+||+||++||+++... ...+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 7899999976531 12345667889999999999997543 14567777776655433 489999
Q ss_pred cCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEE--EeCCEEEEEEcCcCC----------CCCcHHHHHHHH
Q 017051 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSF--DVAGAHLIMLGSYAD----------YDEYSDQYRWLK 268 (378)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf--~~g~v~fi~ldt~~~----------~~~~~~Q~~WL~ 268 (378)
++||||..+..........|.+...... ....+|.+ ..|+++||+|||... .....+|++||+
T Consensus 82 v~GNHD~~~~~~~~~~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~wL~ 156 (256)
T cd07401 82 IRGNHDLFNIPSLDSENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDRLE 156 (256)
T ss_pred eCCCCCcCCCCCccchhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHHHH
Confidence 9999999543221111122222111110 01223333 358999999999632 113489999999
Q ss_pred HHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecc
Q 017051 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRV 334 (378)
Q Consensus 269 ~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~ 334 (378)
+.|++... .+++||++|+|++...... . .....+.++|++++|+++||||.|.+++-.|+
T Consensus 157 ~~L~~~~~--~~~~IV~~HhP~~~~~~~~-~---~~~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 157 KELEKSTN--SNYTIWFGHYPTSTIISPS-A---KSSSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHhccc--CCeEEEEEcccchhccCCC-c---chhHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 99998643 3579999999986532211 1 12233999999999999999999999985665
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=180.68 Aligned_cols=279 Identities=24% Similarity=0.287 Sum_probs=186.5
Q ss_pred CC-ceEEEEecC-CCeEEEEEEcCC-C------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 42 HP-QQVHISLAG-DSHMRVTWITDD-E------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 42 ~p-~~v~l~~~~-~~~~~i~W~t~~-~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
.| .+.-|+.++ ...-.|.|.--+ . +.+..+|++++++..+.+..++... .....+.+++.++||+|+
T Consensus 36 rpaF~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p~~dhtv~v~~~gL~P~ 111 (522)
T COG3540 36 RPAFTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SPELDHTVHVDLRGLSPD 111 (522)
T ss_pred CCccccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccC----CcccCceEEEeccCCCCC
Confidence 45 455566666 334455665442 1 3456788888775444443333211 135678999999999999
Q ss_pred CEEEEEeCcc---CceeEEECCCC-CCCeEEEEEcccCCCCC---hHHHHHHhhcCCCcEEEeccccccccchhhh----
Q 017051 113 TVYFYRCGRQ---GPEFEFKTPPA-QFPITFAVAGDLGQTGW---TKSTLDHIGQCKYDVHLLPGDLSYADYMQHR---- 181 (378)
Q Consensus 113 t~Y~Y~v~~~---s~~~~F~t~p~-~~~~~f~~~gD~~~~~~---~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~---- 181 (378)
+.|+||+... +..++|||+|+ ...++++.++|.....+ .-.+.+.|.+.+|||+||+||.+|+.+....
T Consensus 112 ~~yfYRf~~~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~ 191 (522)
T COG3540 112 QDYFYRFKAGDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSL 191 (522)
T ss_pred ceEEEEEeeCCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCccccccc
Confidence 9999998653 78899999998 56788888888744433 4578888999999999999999998765211
Q ss_pred ------------------HHHHH---------HhhHhhhhCCceeecCCCCccCCCCcc----------cc--------h
Q 017051 182 ------------------WDTFG---------ELVQPLASARPWMVTQGNHEKESIPLI----------MD--------A 216 (378)
Q Consensus 182 ------------------~~~~~---------~~~~~l~~~~P~~~v~GNHD~~~~~~~----------~~--------~ 216 (378)
.+.+. .-++...+..|+++.+.+||..++-.. .. .
T Consensus 192 ~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A 271 (522)
T COG3540 192 NSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAA 271 (522)
T ss_pred ccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHH
Confidence 12221 234556667999999999999643110 01 1
Q ss_pred hhhchhcccCCCCCCCC--CCCceEEEEeCC-EEEEEEcCcCCC------C----------------CcHHHHHHHHHHh
Q 017051 217 FQSYNARWKMPFEESGS--NSNLYYSFDVAG-AHLIMLGSYADY------D----------------EYSDQYRWLKDDL 271 (378)
Q Consensus 217 ~~~~~~~~~~p~~~~~~--~~~~~ysf~~g~-v~fi~ldt~~~~------~----------------~~~~Q~~WL~~~L 271 (378)
.+.|.+ .||...... ....|.+|.||+ +.|.+||+.... + .+..|.+||++.|
T Consensus 272 ~qAyyE--~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L 349 (522)
T COG3540 272 RQAYYE--HMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGL 349 (522)
T ss_pred HHHHHH--hCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhh
Confidence 123322 255432221 246899999998 689999985322 0 2689999999999
Q ss_pred hhccCCCCCeEEEEeccccccC----C---CC------CCCCchHHHHHHHHHHHhcCCc--EEEecCccccc
Q 017051 272 SKVDRKKTPWLLVLLHVPWYNS----N---EA------HQGEGDGMMAIMEPLLYAASVD--LVLAGHVHAYE 329 (378)
Q Consensus 272 ~~~~~~~~~~~iv~~H~P~~~~----~---~~------~~~~~~~~~~~l~~l~~~~~vd--lvl~GH~H~y~ 329 (378)
... ++.|+|+..-.|+-.. . .. .+.-....|+.|..+++..++. ++|+|.+|..-
T Consensus 350 ~~S---katWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 350 GAS---KATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred hhc---chhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 995 7789999888886211 1 00 0011124688999999999765 99999999643
|
|
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-21 Score=179.89 Aligned_cols=217 Identities=20% Similarity=0.250 Sum_probs=137.3
Q ss_pred EEcccCCCCC---hHHHHHHhhcC--CCcEEEeccccccccchhh--------hHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 141 VAGDLGQTGW---TKSTLDHIGQC--KYDVHLLPGDLSYADYMQH--------RWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 141 ~~gD~~~~~~---~~~~~~~i~~~--~~d~vi~~GDl~~~~~~~~--------~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
-+|+.+.... .+.+++.+++. +|||||++||++..+.... .+..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 3555553322 34566777665 9999999999998765422 134455556666667999999999999
Q ss_pred CCCCcc------cchhhhchhccc--CCCCC-CCCCCCceEEEE-eCCEEEEEEcCcCCC-----------CCcHHHHHH
Q 017051 208 ESIPLI------MDAFQSYNARWK--MPFEE-SGSNSNLYYSFD-VAGAHLIMLGSYADY-----------DEYSDQYRW 266 (378)
Q Consensus 208 ~~~~~~------~~~~~~~~~~~~--~p~~~-~~~~~~~~ysf~-~g~v~fi~ldt~~~~-----------~~~~~Q~~W 266 (378)
...... ...+..+...|. ++.+. .....+.||++. .+++++|+|||.... .....|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 532111 111222222221 22211 112246899998 889999999995321 124789999
Q ss_pred HHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcC--CcEEEecCccccceeecccCCC--cCCC
Q 017051 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAYERSIRVNNGK--PDPC 342 (378)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H~y~r~~~~~~~~--~~~~ 342 (378)
|+++|+++++++ ..++|++|+|+........ ....+.+.+++++|. |.++|+||+|..+... ++... .++.
T Consensus 202 L~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~~---~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~-~~~~~~~~~~~ 276 (296)
T cd00842 202 LEDELQEAEQAG-EKVWIIGHIPPGVNSYDTL---ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV-FYDDNDTGEPI 276 (296)
T ss_pred HHHHHHHHHHCC-CeEEEEeccCCCCcccccc---hHHHHHHHHHHHHHHHhhheeeecccccceEEE-EeCCCCCCCce
Confidence 999999986533 3488999999976543211 245789999999997 7789999999977654 33322 2334
Q ss_pred ccEEEEeCCCCCCCCccccccccccC
Q 017051 343 GAVYITIGDGGNKEGLARKYVLTYRN 368 (378)
Q Consensus 343 g~~yiv~G~gG~~~~~~~~~~~p~~~ 368 (378)
++.++ + +.-+....++|.||
T Consensus 277 ~~~~~--~----psitp~~~~nP~~r 296 (296)
T cd00842 277 NVALI--A----PSVTPYSGNNPGFR 296 (296)
T ss_pred EEEEe--c----CccCcCCCCCCCCC
Confidence 45544 2 22223335677764
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-18 Score=154.95 Aligned_cols=168 Identities=20% Similarity=0.258 Sum_probs=109.5
Q ss_pred HHHHHhh-cCCCcEEEeccccccccch--hhhHHH----HHHhhHhhhhCCceeecCCCCccCCCCcc-cchhhhchhcc
Q 017051 153 STLDHIG-QCKYDVHLLPGDLSYADYM--QHRWDT----FGELVQPLASARPWMVTQGNHEKESIPLI-MDAFQSYNARW 224 (378)
Q Consensus 153 ~~~~~i~-~~~~d~vi~~GDl~~~~~~--~~~~~~----~~~~~~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~ 224 (378)
+.++.+. ..+||+||++||+++.+.. ..+|.. |.+.+.++...+|++.++||||+...... ......|.+.|
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~~~~rf~~~F 114 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLPVRQRFEKYF 114 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHHHHHHHHHHh
Confidence 3444443 4689999999999986543 344543 33333333234799999999998532211 12334555555
Q ss_pred cCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC-----CCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCC
Q 017051 225 KMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG 299 (378)
Q Consensus 225 ~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 299 (378)
. ..++++++|+++||+||+.... .....|.+||++.|+.... ..+ +||++|+|+|.......+
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~p-~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVK-SKP-RILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCC-CCc-EEEEeccccccCCCCCCC
Confidence 2 3468899999999999995321 2346799999999887643 334 899999999865321111
Q ss_pred ------------Cch----H-HHHHHHHHHHhcCCcEEEecCccccceee
Q 017051 300 ------------EGD----G-MMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 300 ------------~~~----~-~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 332 (378)
.+. . ..+.-..+|++.++.+||+||+|.|-...
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 000 0 12344477888899999999999986654
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.4e-19 Score=150.70 Aligned_cols=188 Identities=22% Similarity=0.175 Sum_probs=102.3
Q ss_pred eEEEEEcccCCCCChH-----HHHHHhhcCCCcEEEeccccccccchhhhHHHHH-HhhHhhhhCCceeecCCCCccCCC
Q 017051 137 ITFAVAGDLGQTGWTK-----STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG-ELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~-----~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~-~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
+||+++||+|...... .........++|+||++||+++.+.....+.... .........+|+++++||||+...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 6999999999875432 2333445889999999999999877644443322 223344556999999999999532
Q ss_pred Ccccchhhhchhccc-CCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHH---HHHHHHHHhhhccCCCCCeEEEEe
Q 017051 211 PLIMDAFQSYNARWK-MPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD---QYRWLKDDLSKVDRKKTPWLLVLL 286 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~---Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (378)
... ........... ..........+.......................... +..|+...++. ...+++||++
T Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iv~~ 156 (200)
T PF00149_consen 81 NSF-YGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDDPVIVFT 156 (200)
T ss_dssp HHH-HHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEESEEEEEE
T ss_pred ccc-cccccccccccccccccccccCcceeeecccccccccccccccccccccchhccccccccccc---ccccceeEEE
Confidence 110 00000000000 0000000000000111222222222222111111222 22333333333 2456899999
Q ss_pred ccccccCCCCCCC--CchHHHHHHHHHHHhcCCcEEEecCcccc
Q 017051 287 HVPWYNSNEAHQG--EGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (378)
Q Consensus 287 H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 328 (378)
|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 157 H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 157 HHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp SSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999876543211 11246789999999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=147.92 Aligned_cols=190 Identities=18% Similarity=0.224 Sum_probs=117.1
Q ss_pred EEEcccCCCC--------Ch---HHHHHHhhcC------CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecC
Q 017051 140 AVAGDLGQTG--------WT---KSTLDHIGQC------KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQ 202 (378)
Q Consensus 140 ~~~gD~~~~~--------~~---~~~~~~i~~~------~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~ 202 (378)
.+++|+|... .. .+.++.+.+. +||+||++||+++.... .......+.++.+ ..|+++|+
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~-~~~~~~l~~l~~l--~~~v~~V~ 78 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKL-EEAKLDLAWIDAL--PGTKVLLK 78 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCCh-HHHHHHHHHHHhC--CCCeEEEe
Confidence 5789998762 11 2444444433 99999999999854332 2222222333332 25789999
Q ss_pred CCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcC----CC-----------C--CcHHHHH
Q 017051 203 GNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA----DY-----------D--EYSDQYR 265 (378)
Q Consensus 203 GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~----~~-----------~--~~~~Q~~ 265 (378)
||||+.. . ....+.+.+. .. +..-....++.++++.|++++... .+ . ....|++
T Consensus 79 GNHD~~~-~----~~~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (232)
T cd07393 79 GNHDYWW-G----SASKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERELE 149 (232)
T ss_pred CCccccC-C----CHHHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHHHH
Confidence 9999831 1 1122222111 00 000011344667889999986321 11 0 1256899
Q ss_pred HHHHHhhhccCCC-CCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCcc
Q 017051 266 WLKDDLSKVDRKK-TPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGA 344 (378)
Q Consensus 266 WL~~~L~~~~~~~-~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~ 344 (378)
||++.|+++.... ..++|+++|+|++.... ..+.+.+++++++++++|+||+|.+++..|+.. ..+|+
T Consensus 150 ~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~--------~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~---~~~gi 218 (232)
T cd07393 150 RLELSLKAAKKREKEKIKIVMLHYPPANENG--------DDSPISKLIEEYGVDICVYGHLHGVGRDRAING---ERGGI 218 (232)
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCCCcCCCC--------CHHHHHHHHHHcCCCEEEECCCCCCcccccccc---eECCE
Confidence 9999999864322 24699999999876432 125678889999999999999999988776531 12577
Q ss_pred EEEEeCCC
Q 017051 345 VYITIGDG 352 (378)
Q Consensus 345 ~yiv~G~g 352 (378)
.|.++.+|
T Consensus 219 ~~~~~~~~ 226 (232)
T cd07393 219 RYQLVSAD 226 (232)
T ss_pred EEEEEcch
Confidence 78777655
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.7e-17 Score=154.75 Aligned_cols=128 Identities=20% Similarity=0.287 Sum_probs=88.8
Q ss_pred CCceEEEE-eCCEEEEEEcCcCCC-----CCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCC-----CCchH
Q 017051 235 SNLYYSFD-VAGAHLIMLGSYADY-----DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ-----GEGDG 303 (378)
Q Consensus 235 ~~~~ysf~-~g~v~fi~ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-----~~~~~ 303 (378)
+..||+|+ .++++||+|||.... ....+|++||+++|++. +.+++||++|||++....... +....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 46799999 899999999996421 23589999999999975 234699999999886543211 11112
Q ss_pred HHHHHHHHHHhc-CCcEEEecCccccceeecc-cCCCcCCCccEEEEeCCCCCCCCccccccccccCceecc
Q 017051 304 MMAIMEPLLYAA-SVDLVLAGHVHAYERSIRV-NNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELS 373 (378)
Q Consensus 304 ~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~-~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~ 373 (378)
..++|.++|++| +|.++||||.|......-. .++.....|.+.|.+++-=. | +-++|+|||-
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaSlvd-------f-Pq~~Ri~Ei~ 430 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTASHID-------F-PQQGRIIELA 430 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEecccccc-------C-CCCceEEEEE
Confidence 357899999999 7999999999987644311 11111124777787774321 1 2477899983
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=143.91 Aligned_cols=161 Identities=22% Similarity=0.331 Sum_probs=105.5
Q ss_pred CeEEEEEcccCCCCCh------------HHHHHH-hhcCCCcEEEeccccccccchhh-hHHHHHHhhHhhhh-CCceee
Q 017051 136 PITFAVAGDLGQTGWT------------KSTLDH-IGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQPLAS-ARPWMV 200 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~~------------~~~~~~-i~~~~~d~vi~~GDl~~~~~~~~-~~~~~~~~~~~l~~-~~P~~~ 200 (378)
.+||++++|+|..... .+.+.+ +...+||+||++||+++...... .+..+.+.++.+.. .+|+++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 6899999999975431 122332 34679999999999998665432 34555556666544 499999
Q ss_pred cCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhcc--CCC
Q 017051 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVD--RKK 278 (378)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~--~~~ 278 (378)
++||||.. .+ ....|++||+++|++.. +..
T Consensus 82 ~~GNHD~~-----------------------------------------------g~-l~~~ql~wL~~~l~~~~~~~~~ 113 (199)
T cd07383 82 TFGNHDGY-----------------------------------------------DW-IRPSQIEWFKETSAALKKKYGK 113 (199)
T ss_pred ECccCCCC-----------------------------------------------CC-CCHHHHHHHHHHHHHHhhccCC
Confidence 99999920 11 23689999999999863 123
Q ss_pred CCeEEEEeccccccCCCCCC---------CC---chHHHHHHHH-HHHhcCCcEEEecCccccceeecccCCCcCCCccE
Q 017051 279 TPWLLVLLHVPWYNSNEAHQ---------GE---GDGMMAIMEP-LLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAV 345 (378)
Q Consensus 279 ~~~~iv~~H~P~~~~~~~~~---------~~---~~~~~~~l~~-l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~ 345 (378)
..+.++++|+|+......+. .+ .......+.. +.+..+|+++|+||+|.++.... .+.+
T Consensus 114 ~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~~--------~~~i 185 (199)
T cd07383 114 PIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCGR--------YNGI 185 (199)
T ss_pred CCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceecc--------cCCE
Confidence 34699999999865322111 01 0012234444 44667899999999999876553 2444
Q ss_pred EEEeCCC
Q 017051 346 YITIGDG 352 (378)
Q Consensus 346 yiv~G~g 352 (378)
.+..|..
T Consensus 186 ~l~~g~~ 192 (199)
T cd07383 186 WLCYGRG 192 (199)
T ss_pred EEeCCCC
Confidence 5666654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=8e-17 Score=139.49 Aligned_cols=167 Identities=13% Similarity=0.136 Sum_probs=102.9
Q ss_pred EEEEcccCCCCChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhh
Q 017051 139 FAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQ 218 (378)
Q Consensus 139 f~~~gD~~~~~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~ 218 (378)
++++||+|........ ..+.+.++|+||++||+++.+.. .....+ +.++.+ .+|+++++||||.... ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~~-~~~~~~-~~l~~~--~~p~~~v~GNHD~~~~------~~ 69 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGGK-EAAVEI-NLLLAI--GVPVLAVPGNCDTPEI------LG 69 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCCH-HHHHHH-HHHHhc--CCCEEEEcCCCCCHHH------HH
Confidence 5789999975422112 34567789999999999976543 222222 233222 3899999999998311 11
Q ss_pred hchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCC------CCCcHHHHHHHHHHhhhccCCCCCeEEEEecccccc
Q 017051 219 SYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (378)
Q Consensus 219 ~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (378)
...... .. .....+.+++++|+++++... .....+|++|+ +.+... ..+.+|+++|+|++.
T Consensus 70 ~~~~~~-~~--------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~~~ilv~H~pp~~ 136 (188)
T cd07392 70 LLTSAG-LN--------LHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAKNLILVTHAPPYG 136 (188)
T ss_pred hhhcCc-Ee--------cCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCCCeEEEECCCCcC
Confidence 110000 00 111345678899999987421 12246888998 444433 223589999999976
Q ss_pred C-CCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 293 S-NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 293 ~-~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
. ............+.+.+++++++++++||||.|...
T Consensus 137 ~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 137 TAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred CcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 111111101234788899999999999999999853
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.3e-17 Score=144.73 Aligned_cols=204 Identities=20% Similarity=0.134 Sum_probs=125.9
Q ss_pred CeEEEEEcccCCCCC-----hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 136 PITFAVAGDLGQTGW-----TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-----~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
++||++++|+|.... .+++++.+.+.+||+|+++||+++...... +.+.+.++.+....|+++++||||+...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~v~GNHD~~~~ 78 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYAVLGNHDYYSG 78 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEEECCCcccccC
Confidence 479999999997643 245666677889999999999998654322 3455566666566899999999999543
Q ss_pred CcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecccc
Q 017051 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (378)
.. ..+....+...... ..+....++.++..+..+.... .....+++.+.+++.+. ..+.|++.|.|.
T Consensus 79 ~~--~~~~~~l~~~~v~~-----L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~~~--~~~~I~l~H~P~ 145 (223)
T cd07385 79 DE--ENWIEALESAGITV-----LRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGLDE--DDPNILLAHQPD 145 (223)
T ss_pred ch--HHHHHHHHHcCCEE-----eecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCCCC--CCCEEEEecCCC
Confidence 21 11011111111110 1234455566654444332111 11223456666665432 346899999984
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC--------------cCCCccEEEEeCCCCCCC
Q 017051 291 YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--------------PDPCGAVYITIGDGGNKE 356 (378)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~--------------~~~~g~~yiv~G~gG~~~ 356 (378)
+.. .+.+.++|++++||+|..|...|..... ...+..+||..|.|.. .
T Consensus 146 ~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs~G~G~~-~ 207 (223)
T cd07385 146 TAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVSRGLGTW-G 207 (223)
T ss_pred hhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEcCCccCC-C
Confidence 321 1256799999999999998776544321 1123567777776654 3
Q ss_pred CccccccccccCceec
Q 017051 357 GLARKYVLTYRNIFEL 372 (378)
Q Consensus 357 ~~~~~~~~p~~~~~e~ 372 (378)
-..+.+.+|+..+++|
T Consensus 208 ~~~R~~~~pEi~~i~l 223 (223)
T cd07385 208 PPLRLGCPPEITLITL 223 (223)
T ss_pred CchhcCCCCcEEEEEC
Confidence 3467778999988875
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.2e-16 Score=143.45 Aligned_cols=204 Identities=20% Similarity=0.160 Sum_probs=123.7
Q ss_pred CCCCeEEEEEcccCCCCC-----hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 133 AQFPITFAVAGDLGQTGW-----TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~-----~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
..+++||+++||+|.... .+++++.+++.+||+|+++||+++.+.. ..++.+.+.++.+.+..|+++|+||||+
T Consensus 46 ~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~-~~~~~~~~~L~~L~~~~pv~~V~GNHD~ 124 (271)
T PRK11340 46 NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMP-LNFSAFSDVLSPLAECAPTFACFGNHDR 124 (271)
T ss_pred CCCCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCcc-ccHHHHHHHHHHHhhcCCEEEecCCCCc
Confidence 356799999999997632 2345566678899999999999973221 2345566677777666899999999998
Q ss_pred CCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCC--EEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEE
Q 017051 208 ESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (378)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~--v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (378)
..............+.-.. .-..+....+..++ +.++++|....... . ..+.+++ + ..+|++
T Consensus 125 ~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~---~---~~~~~~~----~-~~~IlL 188 (271)
T PRK11340 125 PVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQC---K---PPPASEA----N-LPRLVL 188 (271)
T ss_pred ccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCC---C---hhHhcCC----C-CCeEEE
Confidence 4221100011111111100 01123444455543 66677764211110 0 1111221 2 248999
Q ss_pred eccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccC-------------CCcC-CCccEEEEeCC
Q 017051 286 LHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNN-------------GKPD-PCGAVYITIGD 351 (378)
Q Consensus 286 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~-------------~~~~-~~g~~yiv~G~ 351 (378)
.|.|-+- +.+.+.++|++||||+|..|...|..+ |.-. .+..+||..|-
T Consensus 189 ~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~~~~~~~~~~~~~~~~G~~~~~~~~l~Vs~G~ 251 (271)
T PRK11340 189 AHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPLVGEPFAPVEDKRYVAGLNAFGERQIYTTRGV 251 (271)
T ss_pred EcCCChh-----------------HhhccCCCCEEEeccccCCeEEccccCccccccccCcccCCcEEeCCcEEEEeCCc
Confidence 9999431 124567899999999999887766421 1111 23457777777
Q ss_pred CCCCCCccccccccccCceec
Q 017051 352 GGNKEGLARKYVLTYRNIFEL 372 (378)
Q Consensus 352 gG~~~~~~~~~~~p~~~~~e~ 372 (378)
|. . ...+.+.+|++.+++|
T Consensus 252 G~-~-~p~R~~~~pEi~~i~l 270 (271)
T PRK11340 252 GS-L-YGLRLNCRPEVTMLEL 270 (271)
T ss_pred cC-C-cCCcccCCCeEEEEEe
Confidence 74 3 5678889999999886
|
|
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-16 Score=142.62 Aligned_cols=176 Identities=18% Similarity=0.112 Sum_probs=107.4
Q ss_pred EEEEEcccCCCCCh-------HHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 138 TFAVAGDLGQTGWT-------KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 138 ~f~~~gD~~~~~~~-------~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
||++++|+|..... +.+++.+.+.++|+||++||++... .....+.+.+..+ ..+|++.++||||+...
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v~GNHD~~~~ 76 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFNAGNHDMLKD 76 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEECCCCCCCCC
Confidence 58999999964211 2355666678899999999999642 1122233333332 34899999999998411
Q ss_pred CcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC--------------------------C-----C
Q 017051 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY--------------------------D-----E 259 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~--------------------------~-----~ 259 (378)
.. ...+.+.+ .+ ....+.++.+..++++|++++.+.++ . .
T Consensus 77 ~~----~~~~~~~~-~~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 147 (239)
T TIGR03729 77 LT----YEEIESND-SP----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKRPMSDPER 147 (239)
T ss_pred CC----HHHHHhcc-ch----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCCCCChHHH
Confidence 11 11121111 00 00112333344467888888843221 0 1
Q ss_pred cHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC------CCCCC-c-hHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 260 YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE------AHQGE-G-DGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 260 ~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~------~~~~~-~-~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
...|++||++.|++... +.+|+++|+|+..... ..+.. . ......+.+++++++++++||||.|.-.
T Consensus 148 ~~~~l~~l~~~l~~~~~---~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 148 TAIVLKQLKKQLNQLDN---KQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHHHHHHHHHhcCC---CCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECCccCCC
Confidence 26788999999988743 2389999999854211 11111 0 1124789999999999999999999864
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-15 Score=133.85 Aligned_cols=172 Identities=13% Similarity=0.088 Sum_probs=104.3
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh-CCceeecCCCCccCCCCcc
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKESIPLI 213 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~~~~~ 213 (378)
..|++++||+|.+.. .+++++.+++.++|+||++||+++.+....... ..++.+.. ..|+++++||||.. ..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~---~~l~~l~~l~~pv~~V~GNhD~~-v~-- 77 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYA---AFFRILGEAHLPTFYVPGPQDAP-LW-- 77 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHH---HHHHHHHhcCCceEEEcCCCChH-HH--
Confidence 568999999996532 234555555678999999999997552222233 33444433 27999999999973 10
Q ss_pred cchhh-hchhcccCCCCCCCCCCCceEEEEe-CCEEEEEEcCcCCC--CCcHHHH----HHHHH----HhhhccCCCCCe
Q 017051 214 MDAFQ-SYNARWKMPFEESGSNSNLYYSFDV-AGAHLIMLGSYADY--DEYSDQY----RWLKD----DLSKVDRKKTPW 281 (378)
Q Consensus 214 ~~~~~-~~~~~~~~p~~~~~~~~~~~ysf~~-g~v~fi~ldt~~~~--~~~~~Q~----~WL~~----~L~~~~~~~~~~ 281 (378)
.... .|.+....|... ...+. ...+ |+++|++++....+ ...+++. .|+.+ .+.+. ..+.
T Consensus 78 -~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~---~~~~ 149 (224)
T cd07388 78 -EYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL---KDYR 149 (224)
T ss_pred -HHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhC---CCCC
Confidence 0111 111111112100 01122 2344 56999999865433 2234442 56433 33332 2235
Q ss_pred EEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCcc
Q 017051 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (378)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H 326 (378)
.|+++|+||+.....+ .....+.++++++++.+++|||.|
T Consensus 150 ~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 150 KVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred eEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 8999999999874322 245889999999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=139.97 Aligned_cols=179 Identities=23% Similarity=0.303 Sum_probs=118.2
Q ss_pred eEEEEEcccCCC--CC-h----HHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCC
Q 017051 137 ITFAVAGDLGQT--GW-T----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (378)
Q Consensus 137 ~~f~~~gD~~~~--~~-~----~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 209 (378)
++|+.++|+|.. .. . .++++.++..+||+||++||+++. +....++.+.+.++......|++.+|||||...
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 489999999987 22 2 345567778899999999999987 334556666666664444589999999999853
Q ss_pred CCcccchhhhchhcccCCCCCCCCCCCceEEEEe-CCEEEEEEcCcCCC----CCcHHHHHHHHHHhhhccCCCCCeEEE
Q 017051 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV-AGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (378)
Q Consensus 210 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~-g~v~fi~ldt~~~~----~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (378)
. ....+...+.... ..+..... ++++++.+|+.... ..+..|++||++.|++........+|+
T Consensus 80 ~-----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~~~~~~v~ 147 (301)
T COG1409 80 V-----NGEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPERAKDTVVV 147 (301)
T ss_pred h-----HHHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccccCceEEE
Confidence 2 1222222221110 11111112 67899999996432 245899999999999875431123577
Q ss_pred EeccccccCCCCCCCCchHHHHHHHHHHHhcC--CcEEEecCcccc
Q 017051 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAY 328 (378)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H~y 328 (378)
+.|+|+.................+..++..++ ++++|+||.|..
T Consensus 148 ~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 148 LHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred ecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 77777665444322222233467778888888 999999999976
|
|
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=125.57 Aligned_cols=132 Identities=27% Similarity=0.303 Sum_probs=95.4
Q ss_pred EEEEcccCCCCChH-----------HHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhC-CceeecCCCCc
Q 017051 139 FAVAGDLGQTGWTK-----------STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWMVTQGNHE 206 (378)
Q Consensus 139 f~~~gD~~~~~~~~-----------~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD 206 (378)
|+.++|+|.+.... .+++.+...++|+|+++||+++.+. ..+|+.+.+.++.+... +|++.++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~~~~l~~~~~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL-PEEFEEAREFLDALPAPLEPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC-HHHHHHHHHHHHHccccCCcEEEeCCCCe
Confidence 57899999765321 1344556789999999999998655 35677777777777654 69999999999
Q ss_pred cCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEe
Q 017051 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (378)
. |+++
T Consensus 80 ~---------------------------------------------------------------------------iv~~ 84 (144)
T cd07400 80 V---------------------------------------------------------------------------IVVL 84 (144)
T ss_pred E---------------------------------------------------------------------------EEEe
Confidence 7 8999
Q ss_pred ccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCC
Q 017051 287 HVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (378)
Q Consensus 287 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~ 351 (378)
|+|++.......... ...+.+.++++++++++++|||+|...... .. ....+++++.+|+
T Consensus 85 Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~-~~---~~~~~~~~~~aGs 144 (144)
T cd07400 85 HHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGN-IS---NAGGGLVVIGAGT 144 (144)
T ss_pred cCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeee-cc---CCCCCEEEEecCC
Confidence 999977544221111 145789999999999999999999865433 11 1234677777764
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.4e-14 Score=136.49 Aligned_cols=128 Identities=16% Similarity=0.177 Sum_probs=80.5
Q ss_pred CceEEEE-eCCE--EEEEEcCcCC---------C--CCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCC----C
Q 017051 236 NLYYSFD-VAGA--HLIMLGSYAD---------Y--DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA----H 297 (378)
Q Consensus 236 ~~~ysf~-~g~v--~fi~ldt~~~---------~--~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~----~ 297 (378)
..||+|+ .|++ ++|+||+... + ....+|++||+++|+.+.. +.+++|+++|+|+.+.... +
T Consensus 292 ~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w 370 (492)
T TIGR03768 292 FACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEW 370 (492)
T ss_pred cceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhh
Confidence 4599999 5855 9999998531 1 1358999999999999864 4466788888887652211 1
Q ss_pred C---------CCchHHHHHHHHHHHhc-CCcEEEecCcccccee-ecccCCCcCCCccEEEEeCCCCCCCCccccccccc
Q 017051 298 Q---------GEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERS-IRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTY 366 (378)
Q Consensus 298 ~---------~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~-~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~ 366 (378)
. ..+.....+|..+|.+| +|.++||||.|..... ++-..+.....|-+.|.+.+ -.-.+.+
T Consensus 371 ~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn~v~a~~~p~~~~pe~gFWeveTaS--------l~DfPQq 442 (492)
T TIGR03768 371 WLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLNTVKAFPSPDPARPEYGFWQVETAS--------LRDFPQQ 442 (492)
T ss_pred ccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccccccccCCCCCCCCcCceEEEeehh--------hccchhh
Confidence 1 00111124899999999 5888999999964322 11111111124666665542 1123458
Q ss_pred cCceec
Q 017051 367 RNIFEL 372 (378)
Q Consensus 367 ~~~~e~ 372 (378)
+|+|||
T Consensus 443 ~R~~Ei 448 (492)
T TIGR03768 443 FRTFEI 448 (492)
T ss_pred ceEEEE
Confidence 899998
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.8e-14 Score=126.73 Aligned_cols=231 Identities=22% Similarity=0.270 Sum_probs=135.1
Q ss_pred CCCeEEEEEcccCCCCC--------------------hHHHHHHh-hcCCCcEEEeccccccccchhhhHHHHHHhhHhh
Q 017051 134 QFPITFAVAGDLGQTGW--------------------TKSTLDHI-GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPL 192 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------------~~~~~~~i-~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l 192 (378)
.++||++.++|+|.+.. +...++++ +.++||||+++||+++.....+.-..++..+++.
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~ 130 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPA 130 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhH
Confidence 56899999999987532 11344444 5789999999999998755555445566777776
Q ss_pred hh-CCceeecCCCCccCCCCcccchhhhchhcccCCCCCCC--CCCCceE-EEEeCC------------------EEEEE
Q 017051 193 AS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESG--SNSNLYY-SFDVAG------------------AHLIM 250 (378)
Q Consensus 193 ~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~y-sf~~g~------------------v~fi~ 250 (378)
.. .|||.++.||||-.+... ......+.. .+|..-+. +....-| -..+|+ ..++.
T Consensus 131 I~~~IPwA~~lGNHDdes~lt-r~ql~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~sv~~lyf 207 (379)
T KOG1432|consen 131 IDRKIPWAAVLGNHDDESDLT-RLQLMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENKSVFNLYF 207 (379)
T ss_pred hhcCCCeEEEecccccccccC-HHHHHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccCceeeEEE
Confidence 44 599999999999964321 111111211 12221000 0011111 111111 23445
Q ss_pred EcCcC---------CCC-CcHHHHHHHHHHhhhc---cCCCCC-eEEEEeccccc--cCCCC---CCC---C---chHHH
Q 017051 251 LGSYA---------DYD-EYSDQYRWLKDDLSKV---DRKKTP-WLLVLLHVPWY--NSNEA---HQG---E---GDGMM 305 (378)
Q Consensus 251 ldt~~---------~~~-~~~~Q~~WL~~~L~~~---~~~~~~-~~iv~~H~P~~--~~~~~---~~~---~---~~~~~ 305 (378)
||+.. .|+ ....|.+||+..-.+- ..+-.| --.++.|.|+- ..-.. ..+ + .....
T Consensus 208 ld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~~~~~~~~ 287 (379)
T KOG1432|consen 208 LDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEGVSASKHN 287 (379)
T ss_pred EecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeeccccccccc
Confidence 55521 111 2478999998887331 111122 36889999962 21111 000 0 11233
Q ss_pred HHHHHHHH-hcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 306 AIMEPLLY-AASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 306 ~~l~~l~~-~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
..+...|. ..+|+.|+|||+|...--.+. ++.+++.=|+|+...+.....-.++.|+||++.
T Consensus 288 sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~-------k~~~wlCygGgaGyggYg~~gw~Rr~Rv~e~d~ 350 (379)
T KOG1432|consen 288 SGFLTTLVNRGNVKGVFCGHDHVNDFCGEL-------KGELWLCYGGGAGYGGYGIGGWERRARVFELDL 350 (379)
T ss_pred cHHHHHHHhccCcceEEeccccccceeccc-------CCeEEEEecCCCccCCcCcCCcccceEEEEccc
Confidence 56666666 779999999999997766543 355778777776665555344578899999975
|
|
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=7e-15 Score=124.90 Aligned_cols=143 Identities=22% Similarity=0.207 Sum_probs=88.5
Q ss_pred EEEEcccCCCCChHH-HH-HHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccch
Q 017051 139 FAVAGDLGQTGWTKS-TL-DHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (378)
Q Consensus 139 f~~~gD~~~~~~~~~-~~-~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 216 (378)
|+++||+|.+..... .+ +.+...++|+|+++||+++.... ..+.. .........|+++++||||+.
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~-~~~~~---~~~~~~~~~~v~~v~GNHD~~-------- 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDA-PRFAP---LLLALKGFEPVIYVPGNHEFY-------- 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcch-HHHHH---HHHhhcCCccEEEeCCCcceE--------
Confidence 578999997643222 22 33456789999999999975432 22221 222333458999999999992
Q ss_pred hhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCC-cHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC
Q 017051 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE-YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (378)
Q Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~-~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (378)
++|++..-+.++.. ..++.+|+.++++ +.+||++|+|+.....
T Consensus 69 -----------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~~ 112 (166)
T cd07404 69 -----------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHAPSPLSL 112 (166)
T ss_pred -----------------------------EEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCCCCcccc
Confidence 22333222222221 1234455444443 2389999999987543
Q ss_pred CCC---C-CchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 296 AHQ---G-EGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 296 ~~~---~-~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
... + .....++.+.+++++.+|++++|||+|...
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 113 APQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 221 1 112345668888899999999999999864
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-14 Score=128.85 Aligned_cols=186 Identities=17% Similarity=0.140 Sum_probs=105.9
Q ss_pred EEEEEcccCCCCCh----------------HHHHHHhhcCCCcEEEeccccccccch-hhhHHHHHHhhHhhh-hCCcee
Q 017051 138 TFAVAGDLGQTGWT----------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLA-SARPWM 199 (378)
Q Consensus 138 ~f~~~gD~~~~~~~----------------~~~~~~i~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~~l~-~~~P~~ 199 (378)
||++++|+|.+... +++++.+.+.+||+||++||+++.... ...+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 68999999976421 334445567899999999999976542 334566666776665 358999
Q ss_pred ecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCC
Q 017051 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKT 279 (378)
Q Consensus 200 ~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 279 (378)
+++||||.............+....... ............+...++.|++++..... ....+.++++..+.... ..
T Consensus 81 ~~~GNHD~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~~~--~~ 156 (223)
T cd00840 81 IIAGNHDSPSRLGALSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRPLD--PD 156 (223)
T ss_pred EecCCCCCccccccccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhccC--CC
Confidence 9999999953221100010010000000 00000011222334456888888754221 11334444444544443 33
Q ss_pred CeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCcccccee
Q 017051 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (378)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 331 (378)
...|++.|.|+.......... .......+...++|++++||.|..+..
T Consensus 157 ~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 157 DFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred CcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 458999999976544321110 123344566789999999999987543
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.2e-13 Score=123.32 Aligned_cols=212 Identities=17% Similarity=0.108 Sum_probs=121.3
Q ss_pred CCCeEEEEEcccCCCCCh---HHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 134 QFPITFAVAGDLGQTGWT---KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
..+++++.++|+|..... .+.+..+.+..||+|+++||+++. ......+...+.++++.+..+++++.||||+...
T Consensus 42 ~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 42 LQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred cCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEEEEecccccccc
Confidence 468999999999987654 345555667888999999999974 1234567777888999888999999999999533
Q ss_pred CcccchhhhchhcccCC--CCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHH-----------HHHHhhhccCC
Q 017051 211 PLIMDAFQSYNARWKMP--FEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRW-----------LKDDLSKVDRK 277 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p--~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~W-----------L~~~L~~~~~~ 277 (378)
..... .....+..... .+.........-.++.++.+... ....++..- +.+.+.+.+.
T Consensus 121 ~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~- 191 (284)
T COG1408 121 RSNVY-IGDLLEELGRVVLRNEIAVIDLLALRIEVGGLDLYL-------AGVEDILAGLPLAPFTIGLDIAEALKQLDE- 191 (284)
T ss_pred cccch-hhhhhhhcceeeecccchhccccccccccccccccc-------ccCchHHhhCcccccccccchhhhhccccc-
Confidence 21100 01111110000 00000000000001111111000 001122221 2233444332
Q ss_pred CCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC--------------cCCCc
Q 017051 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--------------PDPCG 343 (378)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~--------------~~~~g 343 (378)
+ ...|++.|.|-.. ..++++++|++||||+|..|...|..... ...+.
T Consensus 192 ~-~~~IlL~H~P~~~-----------------~~~~~~~~dLvLSGHTHGGQi~~p~~~~l~~~~~~~~~~~g~~~~~~~ 253 (284)
T COG1408 192 D-LPGILLSHEPDII-----------------LQLRLYGVDLVLSGHTHGGQIRLPLWGPLVTNALSGRYRAGGLRQFGA 253 (284)
T ss_pred c-ccceEeccCCcee-----------------hhhccCcceEEEeccccCCeEEeecccccccccccccccccceecCCc
Confidence 2 3489999999432 22566789999999999998877654321 11122
Q ss_pred cEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 344 AVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 344 ~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
.+||..|-|. .....+.+.+|+..++++..
T Consensus 254 ~lyVSrGlG~-~~~p~R~~~~PEI~vitL~~ 283 (284)
T COG1408 254 QLYVSRGLGT-TGPPIRLGCPPEITVITLKA 283 (284)
T ss_pred eEEEeCCcCC-CCCCcccCCCceEEEEEEec
Confidence 3566555554 33456788999999998753
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.4e-13 Score=112.31 Aligned_cols=154 Identities=25% Similarity=0.266 Sum_probs=93.2
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccc
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~ 215 (378)
+||+++||+|.... ..++++.+ .++|+|+++||+++. +.+.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~GNHD~~~------ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVRGNHDNWA------ 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE--CCHSTH------
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEeCCccccc------
Confidence 58999999997632 24556666 569999999999862 3333333333 9999999999731
Q ss_pred hhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC
Q 017051 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (378)
Q Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (378)
+...... .. +.+.+.. .-....|++.|.+++....
T Consensus 62 ----~~~~~~~----------~~----------------------------~~~~~~~---~~~~~~i~~~H~~~~~~~~ 96 (156)
T PF12850_consen 62 ----FPNENDE----------EY----------------------------LLDALRL---TIDGFKILLSHGHPYDVQW 96 (156)
T ss_dssp ----HHSEECT----------CS----------------------------SHSEEEE---EETTEEEEEESSTSSSSTT
T ss_pred ----chhhhhc----------cc----------------------------cccceee---eecCCeEEEECCCCccccc
Confidence 1111000 00 1111110 0113588999987765321
Q ss_pred CCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
..+.+...+...+++++++||.|..+... ..++.++..|+-+..... ..+.|.++++++
T Consensus 97 --------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~~~~~~----~~~~~~i~~~~~ 155 (156)
T PF12850_consen 97 --------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIGGPRHG----DQSGYAILDIED 155 (156)
T ss_dssp --------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSSS-SSS----SSEEEEEEEETT
T ss_pred --------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCCCCCCC----CCCEEEEEEEec
Confidence 23456688889999999999999976654 257888999976654321 178899998875
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=105.34 Aligned_cols=116 Identities=29% Similarity=0.283 Sum_probs=83.8
Q ss_pred EEEcccCCCCChHHHH---HHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccch
Q 017051 140 AVAGDLGQTGWTKSTL---DHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (378)
Q Consensus 140 ~~~gD~~~~~~~~~~~---~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 216 (378)
+++||+|......... ....+.++|+||++||+++...... +..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~GNHD---------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPE-EVLAAALALLLLLGIPVYVVPGNHD---------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCch-HHHHHHHHHhhcCCCCEEEeCCCce----------
Confidence 4689998775443332 3456789999999999998665433 3332223333344599999999999
Q ss_pred hhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCC
Q 017051 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA 296 (378)
Q Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 296 (378)
|+++|.|++.....
T Consensus 70 ------------------------------------------------------------------i~~~H~~~~~~~~~ 83 (131)
T cd00838 70 ------------------------------------------------------------------ILLTHGPPYDPLDE 83 (131)
T ss_pred ------------------------------------------------------------------EEEeccCCCCCchh
Confidence 89999998776543
Q ss_pred CCCCchHHHHHHHHHHHhcCCcEEEecCccccceee
Q 017051 297 HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 297 ~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 332 (378)
........+..+..++.+.+++++|+||.|.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 84 LSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred hcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 222222246888899999999999999999998775
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.6e-12 Score=106.38 Aligned_cols=117 Identities=18% Similarity=0.170 Sum_probs=78.7
Q ss_pred EEEEEcccCCCCChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchh
Q 017051 138 TFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAF 217 (378)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~ 217 (378)
||+++||+|.... .+...++|+|+++||+++.+.. ..++.+.+.++.+. ..++++++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~~-~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~-------- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGTL-EELQKFLDWLKSLP-HPHKIVIAGNHDLTL-------- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHhCC-CCeEEEEECCCCCcC--------
Confidence 5899999996643 3345789999999999875432 33444445554442 123578999999720
Q ss_pred hhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCC
Q 017051 218 QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH 297 (378)
Q Consensus 218 ~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 297 (378)
. . + .+.|+++|.|++......
T Consensus 65 ------------------~---------------------------------------~-~-~~~ilv~H~~p~~~~~~~ 85 (135)
T cd07379 65 ------------------D---------------------------------------P-E-DTDILVTHGPPYGHLDLV 85 (135)
T ss_pred ------------------C---------------------------------------C-C-CCEEEEECCCCCcCcccc
Confidence 0 1 1 237899999998755432
Q ss_pred CCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 298 QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 298 ~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
........+.+.+++++++++++++||+|...
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 86 SSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred ccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 21112234677888899999999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.3e-12 Score=111.50 Aligned_cols=198 Identities=18% Similarity=0.196 Sum_probs=99.1
Q ss_pred eEEEEEcccCCCCChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccch
Q 017051 137 ITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 216 (378)
+|++++||+|... .....+.++..+||+|+++||+++.. ..+.+.+..+ ..|+++++||||..........
T Consensus 1 ~rIa~isDiHg~~-~~~~~~~l~~~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 1 LRIAIVGDVHGQW-DLEDIKALHLLQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred CEEEEEecCCCCc-hHHHHHHHhccCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEcCCCcccccccccch
Confidence 5899999999653 23334566778999999999998432 1222223322 2799999999998532211001
Q ss_pred hhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCC----------------C--CCcHHHHHHHHHHhhhccCCC
Q 017051 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD----------------Y--DEYSDQYRWLKDDLSKVDRKK 278 (378)
Q Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~----------------~--~~~~~Q~~WL~~~L~~~~~~~ 278 (378)
...+.+....-. ...-.|-..++....+.++.+... | ....+-++.+-+.++.... .
T Consensus 72 ~~~l~~~L~~lg----~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~-~ 146 (238)
T cd07397 72 GDRVQEQLELLG----DLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPP-D 146 (238)
T ss_pred HHHHHHHHHHhC----CcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCC-C
Confidence 112222111110 000011112233223333333110 1 1123334444444443332 2
Q ss_pred CCeEEEEeccccccCCCC--------------CCCCchHHHHHHHHHHHhcCCcEEEecCccccceeec-ccC-CCcCCC
Q 017051 279 TPWLLVLLHVPWYNSNEA--------------HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR-VNN-GKPDPC 342 (378)
Q Consensus 279 ~~~~iv~~H~P~~~~~~~--------------~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~-~~~-~~~~~~ 342 (378)
.+ .|++.|.++....+. ..++ ..+.+++..+-..-.++++++||.|.--|... .+. -..+.+
T Consensus 147 ~~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~-~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~~r~~~~~~~~ 224 (238)
T cd07397 147 LP-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGD-PDLALAISQIQQGRQVPLVVFGHMHHRLRRGKGLRNMIAVDRE 224 (238)
T ss_pred CC-eEEEeCcCCcCCCcccccccccccCCcCCCCCC-HHHHHHHHHHhccCCCCEEEeCCccCcccccccccceeeecCC
Confidence 23 799999998765421 1111 12444444333223489999999997532221 100 013457
Q ss_pred ccEEEEeC
Q 017051 343 GAVYITIG 350 (378)
Q Consensus 343 g~~yiv~G 350 (378)
|++|+..+
T Consensus 225 gt~y~N~a 232 (238)
T cd07397 225 GTVYLNAA 232 (238)
T ss_pred CeEEEecc
Confidence 99998654
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.6e-12 Score=107.70 Aligned_cols=204 Identities=16% Similarity=0.181 Sum_probs=123.3
Q ss_pred CCeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccc--cccchhhhHHHHHHhhHhhh-hCCceeecCCCCccCCC
Q 017051 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLS--YADYMQHRWDTFGELVQPLA-SARPWMVTQGNHEKESI 210 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~--~~~~~~~~~~~~~~~~~~l~-~~~P~~~v~GNHD~~~~ 210 (378)
..+++++++|.|.... .++.+..++..++|+++++||++ +-+..... .... .++.+. ..+|+++++||-|-...
T Consensus 2 ~~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~-~~~~-~~e~l~~~~~~v~avpGNcD~~~v 79 (226)
T COG2129 2 KKMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVA-EELN-KLEALKELGIPVLAVPGNCDPPEV 79 (226)
T ss_pred CcceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHH-Hhhh-HHHHHHhcCCeEEEEcCCCChHHH
Confidence 3689999999987653 34555556677999999999999 43332111 1100 034444 34999999999887321
Q ss_pred CcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCc--CCC----CCcH-HHHHHHHHHhhhccCCCCCeEE
Q 017051 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSY--ADY----DEYS-DQYRWLKDDLSKVDRKKTPWLL 283 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~--~~~----~~~~-~Q~~WL~~~L~~~~~~~~~~~i 283 (378)
. . ..+.....- .+ -...++++.|+++... +.+ ...+ +-+.-|++.+++... +-.|
T Consensus 80 ~------~-~l~~~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~---~~~I 141 (226)
T COG2129 80 I------D-VLKNAGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN---PVNI 141 (226)
T ss_pred H------H-HHHhccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC---cceE
Confidence 1 1 111111110 01 4567788888875431 111 1122 233445555555432 1139
Q ss_pred EEeccccccCCCCCCCC-chHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccc
Q 017051 284 VLLHVPWYNSNEAHQGE-GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362 (378)
Q Consensus 284 v~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~ 362 (378)
+++|.|||......... .......+.+++++.++-+.+|||.|-+.-... -..|+.|..|. .
T Consensus 142 l~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~-------iG~TivVNPG~----------~ 204 (226)
T COG2129 142 LLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDK-------IGNTIVVNPGP----------L 204 (226)
T ss_pred EEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeecccccccc-------cCCeEEECCCC----------c
Confidence 99999999876542111 234578999999999999999999997433222 24677776665 2
Q ss_pred cccccCceecccc
Q 017051 363 VLTYRNIFELSNS 375 (378)
Q Consensus 363 ~~p~~~~~e~~~~ 375 (378)
.+.+|.+++++++
T Consensus 205 ~~g~yA~i~l~~~ 217 (226)
T COG2129 205 GEGRYALIELEKE 217 (226)
T ss_pred cCceEEEEEecCc
Confidence 3467777777653
|
|
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=103.41 Aligned_cols=147 Identities=20% Similarity=0.211 Sum_probs=91.8
Q ss_pred EEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccch
Q 017051 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDA 216 (378)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~ 216 (378)
|++++||+|.... ..++++.+.. +|.|+++||+++...... +....|++.|+||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~-----------~~~~~~~~~V~GNhD~~~~------ 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE-----------LELKAPVIAVRGNCDGEVD------ 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch-----------hhcCCcEEEEeCCCCCcCC------
Confidence 5899999996531 2233444333 999999999986543211 2334799999999998310
Q ss_pred hhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCC
Q 017051 217 FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEA 296 (378)
Q Consensus 217 ~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 296 (378)
. ..+|. ...++++ .++|+++|.+.......
T Consensus 62 ----~--~~~p~---------~~~~~~~-----------------------------------g~~i~v~Hg~~~~~~~~ 91 (155)
T cd00841 62 ----F--PILPE---------EAVLEIG-----------------------------------GKRIFLTHGHLYGVKNG 91 (155)
T ss_pred ----c--ccCCc---------eEEEEEC-----------------------------------CEEEEEECCcccccccc
Confidence 0 00111 0001100 13688888876543211
Q ss_pred CCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 297 HQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 297 ~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
. .. ..++++.++|++++||+|...... .++++++..|+.|.+.. ...+.|.+++++.
T Consensus 92 -------~-~~-~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~~----~~~~~~~i~~~~~ 148 (155)
T cd00841 92 -------L-DR-LYLAKEGGADVVLYGHTHIPVIEK--------IGGVLLLNPGSLSLPRG----GGPPTYAILEIDD 148 (155)
T ss_pred -------h-hh-hhhhhhcCCCEEEECcccCCccEE--------ECCEEEEeCCCccCcCC----CCCCeEEEEEecC
Confidence 0 11 455677899999999999865332 24788999998776532 2457889999875
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.8e-11 Score=104.72 Aligned_cols=109 Identities=15% Similarity=0.267 Sum_probs=70.6
Q ss_pred hhcCCCcEEEeccccccccchh--hhHHHHHHhhHhh---hhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCC
Q 017051 158 IGQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPL---ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESG 232 (378)
Q Consensus 158 i~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~~~~~l---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~ 232 (378)
+...+||+|+++||+++.+... .+|.+..+.+.++ ...+|++.++||||.++.... ....-.++|.
T Consensus 38 ~~~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~--~~~~~v~RF~------- 108 (195)
T cd08166 38 LNFVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED--PIESKIRRFE------- 108 (195)
T ss_pred HhccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC--cCHHHHHHHH-------
Confidence 3467999999999999987642 2344333333333 234899999999999632110 0011112220
Q ss_pred CCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHH
Q 017051 233 SNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLL 312 (378)
Q Consensus 233 ~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~ 312 (378)
.+| |+++|.|+..... ..+..++
T Consensus 109 ----~~F-------------------------------------------i~lsH~P~~~~~~----------~~~~~~~ 131 (195)
T cd08166 109 ----KYF-------------------------------------------IMLSHVPLLAEGG----------QALKHVV 131 (195)
T ss_pred ----Hhh-------------------------------------------eeeeccccccccc----------HHHHHHH
Confidence 011 8999999875332 3667888
Q ss_pred HhcCCcEEEecCccccceee
Q 017051 313 YAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 313 ~~~~vdlvl~GH~H~y~r~~ 332 (378)
.+++++++|+||.|.+....
T Consensus 132 ~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 132 TDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred HhcCceEEEEcCccceeeEE
Confidence 99999999999999876543
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.5e-11 Score=102.90 Aligned_cols=192 Identities=18% Similarity=0.195 Sum_probs=97.8
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHH--------------------------HHHHhh
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWD--------------------------TFGELV 189 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~--------------------------~~~~~~ 189 (378)
-++++++|.+... ...+++..+...+||.|+++||+........+|. .|++.+
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 4789999986432 2345666677889999999999987665556666 455555
Q ss_pred HhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcC-CCC------C--c
Q 017051 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA-DYD------E--Y 260 (378)
Q Consensus 190 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~-~~~------~--~ 260 (378)
..+. +|++++|||||-......+ ..|....-.|.-. .-...+.+--|...++++.... +.. . .
T Consensus 86 ~~~~--~p~~~vPG~~Dap~~~~lr---~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP 157 (255)
T PF14582_consen 86 GELG--VPVFVVPGNMDAPERFFLR---EAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYP 157 (255)
T ss_dssp HCC---SEEEEE--TTS-SHHHHHH---HHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEE
T ss_pred HhcC--CcEEEecCCCCchHHHHHH---HHhccceecccee---eeeeeecccCCcEEEEecCccccCCCccccccccch
Confidence 4443 9999999999983211000 1111111122100 0012233334457788776531 110 0 1
Q ss_pred HHHHHHHHHHhhhccCCCCCeEEEEecccc-ccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCc
Q 017051 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPW-YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP 339 (378)
Q Consensus 261 ~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~ 339 (378)
....+|..+.|..++ + .-+|+++|.|| ...+..+ ...+.+.++++++++++|||||.|--.-...+
T Consensus 158 ~weaey~lk~l~elk--~-~r~IlLfhtpPd~~kg~~h-----~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~l----- 224 (255)
T PF14582_consen 158 AWEAEYSLKFLRELK--D-YRKILLFHTPPDLHKGLIH-----VGSAAVRDLIKTYNPDIVLCGHIHESHGKESL----- 224 (255)
T ss_dssp HHHHHHHHGGGGGCT--S-SEEEEEESS-BTBCTCTBT-----TSBHHHHHHHHHH--SEEEE-SSS-EE--EEE-----
T ss_pred HHHHHHHHHHHHhcc--c-ccEEEEEecCCccCCCccc-----ccHHHHHHHHHhcCCcEEEecccccchhhHHh-----
Confidence 234456566666653 2 23788899999 3322222 23478999999999999999999974422322
Q ss_pred CCCccEEEEeCC
Q 017051 340 DPCGAVYITIGD 351 (378)
Q Consensus 340 ~~~g~~yiv~G~ 351 (378)
..++-|..|+
T Consensus 225 --G~TlVVNPGs 234 (255)
T PF14582_consen 225 --GKTLVVNPGS 234 (255)
T ss_dssp --TTEEEEE--B
T ss_pred --CCEEEecCcc
Confidence 2455565553
|
|
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.5e-11 Score=100.02 Aligned_cols=152 Identities=17% Similarity=0.183 Sum_probs=92.0
Q ss_pred eEEEEEcccCCCCCh-HHHHHHhhcC-CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 137 ITFAVAGDLGQTGWT-KSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~-~~~~~~i~~~-~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
+|++++||+|..... +..++.++.. ++|.|+++||++. .. ..+.++.+ ..|+++|.||||...
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~----~~----~~~~l~~~--~~~~~~V~GN~D~~~----- 65 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS----PF----VLKEFEDL--AAKVIAVRGNNDGER----- 65 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC----HH----HHHHHHHh--CCceEEEccCCCchh-----
Confidence 489999999965432 3444555555 8999999999982 11 12223322 258999999999820
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCC
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (378)
. .+|. ...+.+ ..++|+++|-..+...
T Consensus 66 -------~--~~~~---------~~~~~~-----------------------------------~g~~i~l~Hg~~~~~~ 92 (158)
T TIGR00040 66 -------D--ELPE---------EEIFEA-----------------------------------EGIDFGLVHGDLVYPR 92 (158)
T ss_pred -------h--hCCc---------ceEEEE-----------------------------------CCEEEEEEeCcccccC
Confidence 0 0111 000111 1246788886542221
Q ss_pred CCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
. . ...+..+.+..++|++++||+|...... ..+++++..|+-+.+.. -..|.|.++++++
T Consensus 93 ~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~iNpGs~~~~~~----~~~~~~~il~~~~ 152 (158)
T TIGR00040 93 G-----D---LLVLEYLAKELGVDVLIFGHTHIPVAEE--------LRGILLINPGSLTGPRN----GNTPSYAILDVDK 152 (158)
T ss_pred C-----C---HHHHHHHHhccCCCEEEECCCCCCccEE--------ECCEEEEECCccccccC----CCCCeEEEEEecC
Confidence 1 1 1344555566789999999999753322 14788898998665432 1257899999875
Q ss_pred cc
Q 017051 375 SN 376 (378)
Q Consensus 375 ~~ 376 (378)
+.
T Consensus 153 ~~ 154 (158)
T TIGR00040 153 DK 154 (158)
T ss_pred Ce
Confidence 43
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.28 E-value=2e-10 Score=98.31 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=92.1
Q ss_pred EEEEEcccCCCCCh---H-HHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcc
Q 017051 138 TFAVAGDLGQTGWT---K-STLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (378)
Q Consensus 138 ~f~~~gD~~~~~~~---~-~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 213 (378)
+++++||+|..... . .+.+.++..++|.|+|+||++. ...++ .++.+ ..|++.|.||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~----~~~~~----~l~~~--~~~~~~V~GN~D~~~---- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS----KETYD----YLKTI--APDVHIVRGDFDENL---- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC----HHHHH----HHHhh--CCceEEEECCCCccc----
Confidence 47899999954322 2 3444444578999999999985 12222 22332 247999999999820
Q ss_pred cchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccC
Q 017051 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (378)
Q Consensus 214 ~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (378)
.+|. ...+++++ ++|.++|--.+..
T Consensus 67 -----------~lp~---------~~~~~~~g-----------------------------------~~i~l~HG~~~~~ 91 (178)
T cd07394 67 -----------NYPE---------TKVITVGQ-----------------------------------FKIGLIHGHQVVP 91 (178)
T ss_pred -----------cCCC---------cEEEEECC-----------------------------------EEEEEEECCcCCC
Confidence 1232 11222232 3556666322211
Q ss_pred CCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceecc
Q 017051 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELS 373 (378)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~ 373 (378)
.. ..+.+..++++.++|++++||+|...... .+|++++..|+.|.+....+....|.|.+++++
T Consensus 92 ~~--------~~~~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~~~~~~~~~~~~syail~~~ 155 (178)
T cd07394 92 WG--------DPDSLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATGAFSPLDPNVIPSFVLMDIQ 155 (178)
T ss_pred CC--------CHHHHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCCCCCCCCCCCCCeEEEEEec
Confidence 10 12345556677889999999999764433 257899999987755332233345788888876
Q ss_pred cc
Q 017051 374 NS 375 (378)
Q Consensus 374 ~~ 375 (378)
.+
T Consensus 156 ~~ 157 (178)
T cd07394 156 GS 157 (178)
T ss_pred CC
Confidence 44
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=6.8e-11 Score=106.55 Aligned_cols=192 Identities=17% Similarity=0.138 Sum_probs=98.8
Q ss_pred eEEEEEcccCCCCChH----HHHHHhh--cCCCcEEEecccccccc---c-hhhhHHHHHHhhHhhhhC-CceeecCCCC
Q 017051 137 ITFAVAGDLGQTGWTK----STLDHIG--QCKYDVHLLPGDLSYAD---Y-MQHRWDTFGELVQPLASA-RPWMVTQGNH 205 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~--~~~~d~vi~~GDl~~~~---~-~~~~~~~~~~~~~~l~~~-~P~~~v~GNH 205 (378)
++++++||+|.+.... ..++.+. ..+||.|+++||+++.- . .........+.++.+... +|+++++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 4789999999765422 2334332 46899999999998631 1 112234445566666655 8999999999
Q ss_pred ccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEE
Q 017051 206 EKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVL 285 (378)
Q Consensus 206 D~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (378)
|.... ..+.+...... -+....+++++.+++..-..... .....++++++.+... |...+
T Consensus 81 D~~~~-------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~~-~~d~~y~~~r~~~r~~------~~~~~ 140 (241)
T PRK05340 81 DFLLG-------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTLC-TDDKAYQRFRRKVRNP------WLQWL 140 (241)
T ss_pred chhhh-------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCcccc-cCCHHHHHHHHHHhCH------HHHHH
Confidence 98321 11211111100 01233466777777776442111 1122333333322221 11111
Q ss_pred eccccccCC---------------C-CCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEe
Q 017051 286 LHVPWYNSN---------------E-AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITI 349 (378)
Q Consensus 286 ~H~P~~~~~---------------~-~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~ 349 (378)
.|.+++... . ..........+.+.+++++++++++++||+|...... +..+ ..+..|++.
T Consensus 141 ~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~-~~~~---~~~~~~~~l 216 (241)
T PRK05340 141 FLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQ-LQAG---GQPATRIVL 216 (241)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceee-ccCC---CcceEEEEe
Confidence 111111000 0 0000000123567788999999999999999864432 2111 112367888
Q ss_pred CCC
Q 017051 350 GDG 352 (378)
Q Consensus 350 G~g 352 (378)
|+-
T Consensus 217 gdw 219 (241)
T PRK05340 217 GDW 219 (241)
T ss_pred CCC
Confidence 865
|
|
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.5e-10 Score=110.48 Aligned_cols=210 Identities=20% Similarity=0.249 Sum_probs=120.6
Q ss_pred HHHHHHhh--cCCCcEEEeccccccccch----hhhH---HHHHHhhHhhhhCCceeecCCCCccCCCCccc-----ch-
Q 017051 152 KSTLDHIG--QCKYDVHLLPGDLSYADYM----QHRW---DTFGELVQPLASARPWMVTQGNHEKESIPLIM-----DA- 216 (378)
Q Consensus 152 ~~~~~~i~--~~~~d~vi~~GDl~~~~~~----~~~~---~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~-----~~- 216 (378)
..+++.|+ ..++|+|+++||++-.... +... ..+.+.+.+....+|++++.||||........ ..
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 45667775 3349999999999865532 1111 22334555666689999999999994221110 00
Q ss_pred -----hhhchhccc--CCCC-CCCCCCCceEEEE-eCCEEEEEEcCcCCC----------CCcHHHHHHHHHHhhhccCC
Q 017051 217 -----FQSYNARWK--MPFE-ESGSNSNLYYSFD-VAGAHLIMLGSYADY----------DEYSDQYRWLKDDLSKVDRK 277 (378)
Q Consensus 217 -----~~~~~~~~~--~p~~-~~~~~~~~~ysf~-~g~v~fi~ldt~~~~----------~~~~~Q~~WL~~~L~~~~~~ 277 (378)
+..+...|. +|.+ ......+.+|.-. +++.++|+||+..-+ .....|++|+..+|.+++.+
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~~ 357 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAESA 357 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHhc
Confidence 011111111 3332 2223346677654 578999999995322 13478899999999998664
Q ss_pred CCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcC--CcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCC
Q 017051 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (378)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~ 355 (378)
+. -+=+++|.|+-.... ..+ ....+-.++.++. +...|.||.|.-+-.. .+.... +.-+.+.+.++.-
T Consensus 358 Ge-kVhil~HIPpG~~~c-~~~----ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~v-~yde~~---~~p~~v~~i~~sv 427 (577)
T KOG3770|consen 358 GE-KVHILGHIPPGDGVC-LEG----WSINFYRIVNRFRSTIAGQFYGHTHIDEFRV-FYDEET---GHPIAVAYIGPSV 427 (577)
T ss_pred CC-EEEEEEeeCCCCcch-hhh----hhHHHHHHHHHHHHhhhhhccccCcceeEEE-Eecccc---CCceeeeeccccc
Confidence 43 377889999754211 111 2244445555552 4466999999866443 232221 2222222333322
Q ss_pred CCccccccccccCceecc
Q 017051 356 EGLARKYVLTYRNIFELS 373 (378)
Q Consensus 356 ~~~~~~~~~p~~~~~e~~ 373 (378)
..-....|++++++++
T Consensus 428 --tty~~~~p~yr~y~~~ 443 (577)
T KOG3770|consen 428 --TTYYNKNPGYRIYAVD 443 (577)
T ss_pred --eehhccCCCceecccC
Confidence 2233568999998887
|
|
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=1e-10 Score=99.48 Aligned_cols=50 Identities=24% Similarity=0.383 Sum_probs=36.1
Q ss_pred hcCCCcEEEeccccccccch--hhhHHHHHHhhHhhh-------hCCceeecCCCCccC
Q 017051 159 GQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLA-------SARPWMVTQGNHEKE 208 (378)
Q Consensus 159 ~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~-------~~~P~~~v~GNHD~~ 208 (378)
...+||+||++||+++.... ...|......+..+. ..+|++.++||||..
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 47899999999999976543 234655444444432 158999999999995
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-09 Score=97.78 Aligned_cols=69 Identities=19% Similarity=0.136 Sum_probs=46.7
Q ss_pred EEEcccCCCCCh----HHHHHHhhc--CCCcEEEecccccccc----chhhhHHHHHHhhHhhhhC-CceeecCCCCccC
Q 017051 140 AVAGDLGQTGWT----KSTLDHIGQ--CKYDVHLLPGDLSYAD----YMQHRWDTFGELVQPLASA-RPWMVTQGNHEKE 208 (378)
Q Consensus 140 ~~~gD~~~~~~~----~~~~~~i~~--~~~d~vi~~GDl~~~~----~~~~~~~~~~~~~~~l~~~-~P~~~v~GNHD~~ 208 (378)
+++||+|.+... +..++.+.+ .+||+|+++||+++.- ......+.+.+.++.+... +|+++++||||..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 689999976532 334555543 3799999999999631 1112234455566666553 8999999999983
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.7e-10 Score=93.91 Aligned_cols=51 Identities=24% Similarity=0.350 Sum_probs=35.8
Q ss_pred hhcCCCcEEEeccccccccch--hhhHHHHHHhhHhhhh---CCceeecCCCCccC
Q 017051 158 IGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLAS---ARPWMVTQGNHEKE 208 (378)
Q Consensus 158 i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~---~~P~~~v~GNHD~~ 208 (378)
+...+||+|+++||+++.... ...|..+...+..+.. .+|++.++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 346899999999999975432 2445554444443332 48999999999994
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.1e-09 Score=96.14 Aligned_cols=156 Identities=19% Similarity=0.135 Sum_probs=97.8
Q ss_pred EEEEEcccCCCCChHHHHHHhh----cCCCcEEEeccccccccch---------------------hhhH-HHHH-----
Q 017051 138 TFAVAGDLGQTGWTKSTLDHIG----QCKYDVHLLPGDLSYADYM---------------------QHRW-DTFG----- 186 (378)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~----~~~~d~vi~~GDl~~~~~~---------------------~~~~-~~~~----- 186 (378)
||++.|+.+...........+. +.+||++|++||.+|.+.. ...+ +.+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5778888765544444555554 7899999999999998752 1111 1111
Q ss_pred HhhHhhhhCCceeecCCCCccCCCCcc---------------cchhhhchhcccCCCCCCC--CCCCceEEEEeCCE-EE
Q 017051 187 ELVQPLASARPWMVTQGNHEKESIPLI---------------MDAFQSYNARWKMPFEESG--SNSNLYYSFDVAGA-HL 248 (378)
Q Consensus 187 ~~~~~l~~~~P~~~v~GNHD~~~~~~~---------------~~~~~~~~~~~~~p~~~~~--~~~~~~ysf~~g~v-~f 248 (378)
..++.+.+++|++.++.+||+.++... ..+...|...+..+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 245667778999999999999643221 0122344444433332221 23578999999996 99
Q ss_pred EEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcC--CcEEEecCcc
Q 017051 249 IMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS--VDLVLAGHVH 326 (378)
Q Consensus 249 i~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H 326 (378)
++||+.... . .+......++.+..++.+.+ -.++|||+.|
T Consensus 161 ~~lD~R~~R-------------------------------------d-~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR-------------------------------------D-SWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc-------------------------------------c-cccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999997654 1 11222345677777655543 2388999999
Q ss_pred cccee
Q 017051 327 AYERS 331 (378)
Q Consensus 327 ~y~r~ 331 (378)
.....
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 75443
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.10 E-value=8.5e-10 Score=89.34 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=69.3
Q ss_pred EEEcccCCCCChHHHHHHh--hcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchh
Q 017051 140 AVAGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAF 217 (378)
Q Consensus 140 ~~~gD~~~~~~~~~~~~~i--~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~ 217 (378)
+++||+|.. ...+.++ ...++|+++++||+.. ...+ .++.+ ...|++++.||||
T Consensus 1 ~viSDtH~~---~~~~~~~~~~~~~~d~ii~~GD~~~-----~~~~----~~~~~-~~~~~~~V~GN~D----------- 56 (129)
T cd07403 1 LVISDTESP---ALYSPEIKVRLEGVDLILSAGDLPK-----EYLE----YLVTM-LNVPVYYVHGNHD----------- 56 (129)
T ss_pred CeeccccCc---cccchHHHhhCCCCCEEEECCCCCh-----HHHH----HHHHH-cCCCEEEEeCCCc-----------
Confidence 478999943 2233333 2578999999999852 1122 22222 2468999999999
Q ss_pred hhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCC
Q 017051 218 QSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH 297 (378)
Q Consensus 218 ~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~ 297 (378)
.+|+++|+|++......
T Consensus 57 ---------------------------------------------------------------~~Ilv~H~pp~~~~~~~ 73 (129)
T cd07403 57 ---------------------------------------------------------------VDILLTHAPPAGIGDGE 73 (129)
T ss_pred ---------------------------------------------------------------cCEEEECCCCCcCcCcc
Confidence 25889999987543211
Q ss_pred CCCchHHHHHHHHHHHhcCCcEEEecCcccccee
Q 017051 298 QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (378)
Q Consensus 298 ~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 331 (378)
. ......+.+.+++.+++++++|+||+|.....
T Consensus 74 ~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 74 D-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred c-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 1 11123578888899999999999999975443
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-09 Score=92.72 Aligned_cols=69 Identities=20% Similarity=0.202 Sum_probs=45.5
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchh-----hhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQ-----HRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~-----~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
+|++++||+|.... .+++++.+++.++|.|+++||+++.+... ...+...+.++.+ ..+++.+.||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcc
Confidence 48999999995422 24455666678999999999998643210 0122223333322 2689999999997
|
|
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.2e-09 Score=99.23 Aligned_cols=74 Identities=22% Similarity=0.145 Sum_probs=50.0
Q ss_pred CCeEEEEEcccCCCCCh-------------HHHHHHhhcCCCcEEEeccccccccchh-hhHHHHHHhhHh---------
Q 017051 135 FPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQ-HRWDTFGELVQP--------- 191 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vi~~GDl~~~~~~~-~~~~~~~~~~~~--------- 191 (378)
+.+||++++|+|.+... .++++.+.+.++|+||++||+.+..... .....+.+.++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~ 81 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCE 81 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccc
Confidence 56899999999976311 2344555688999999999999765541 122222333322
Q ss_pred ---h----------------------hhCCceeecCCCCccC
Q 017051 192 ---L----------------------ASARPWMVTQGNHEKE 208 (378)
Q Consensus 192 ---l----------------------~~~~P~~~v~GNHD~~ 208 (378)
+ ...+|++++.||||..
T Consensus 82 ~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 82 LEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred hhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1258999999999995
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.01 E-value=5e-09 Score=95.10 Aligned_cols=196 Identities=16% Similarity=0.128 Sum_probs=102.3
Q ss_pred eEEEEEcccCCCC-------C---hHHHHHHhhcCCCc-EEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCC
Q 017051 137 ITFAVAGDLGQTG-------W---TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (378)
Q Consensus 137 ~~f~~~gD~~~~~-------~---~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 205 (378)
++|+.++|+|..- . ....++++.+.+|| +++.+||++....... +......++.+...-.-+.++|||
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~-~~~~~~~~~~l~~~g~d~~~~GNH 79 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST-ATKGEANIELMNALGYDAVTIGNH 79 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh-ccCCcHHHHHHHhcCCCEEeeccc
Confidence 4799999998432 1 13566677777788 7799999987554321 111112222232223456788999
Q ss_pred ccCCCCcccchhhhchhcccCCC---C----C--C-CCCCCceEEEEeCCEE--EEEEcCcCCCC----------CcHHH
Q 017051 206 EKESIPLIMDAFQSYNARWKMPF---E----E--S-GSNSNLYYSFDVAGAH--LIMLGSYADYD----------EYSDQ 263 (378)
Q Consensus 206 D~~~~~~~~~~~~~~~~~~~~p~---~----~--~-~~~~~~~ysf~~g~v~--fi~ldt~~~~~----------~~~~Q 263 (378)
|+..... .+....+....|. + . . ......|..++.++++ |+++.+..... .....
T Consensus 80 e~d~g~~---~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T cd00845 80 EFDYGLD---ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWIIGLPFEDL 156 (252)
T ss_pred cccccHH---HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcccCceecCH
Confidence 9953321 2222222222111 0 0 0 0112345567788754 45554321100 00122
Q ss_pred HHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCc
Q 017051 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343 (378)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g 343 (378)
.+.+++..+..+ .+...+|++.|.|... ...+.+.+ .++|++|+||.|........ .++
T Consensus 157 ~~~~~~~~~~~~-~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~~~~~------~~~ 215 (252)
T cd00845 157 AEAVAVAEELLA-EGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLEEPEV------VNG 215 (252)
T ss_pred HHHHHHHHHHHh-CCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccCCCcc------cCC
Confidence 333433222222 3667899999988542 12222212 58999999999986543211 246
Q ss_pred cEEEEeCCCCCCCC
Q 017051 344 AVYITIGDGGNKEG 357 (378)
Q Consensus 344 ~~yiv~G~gG~~~~ 357 (378)
++.+-+|+=|...+
T Consensus 216 ~~v~~~g~~~~~~~ 229 (252)
T cd00845 216 TLIVQAGKYGKYVG 229 (252)
T ss_pred EEEEeCChhHceEE
Confidence 77777775554433
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.9e-08 Score=92.57 Aligned_cols=204 Identities=15% Similarity=0.126 Sum_probs=106.5
Q ss_pred eEEEEEcccCCCCC-----------------hHHHHHHhhcCCCcEEEe-ccccccccchhhhH---------HHHHHhh
Q 017051 137 ITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRW---------DTFGELV 189 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d~vi~-~GDl~~~~~~~~~~---------~~~~~~~ 189 (378)
++|+..+|+|..-. ....++++.+.+|+.+++ +||+...... ..+ +...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-ADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-HHHhhhcccCCCChHHHHH
Confidence 47888888874310 134556666678888776 9999875431 111 1122333
Q ss_pred HhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCC---C----C-CCCCCCceEEEEeC-CEEEEEEcCcCCC---
Q 017051 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----E-SGSNSNLYYSFDVA-GAHLIMLGSYADY--- 257 (378)
Q Consensus 190 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~-~~~~~~~~ysf~~g-~v~fi~ldt~~~~--- 257 (378)
+.+ -.-+.++||||+.... +.+....+....|. + . .......|.-++.+ ++++-++.-....
T Consensus 80 n~~---g~d~~~lGNHe~d~g~---~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~~ 153 (277)
T cd07410 80 NAL---GYDAGTLGNHEFNYGL---DYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIPN 153 (277)
T ss_pred Hhc---CCCEEeecccCcccCH---HHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCccccc
Confidence 333 2346678999985322 12222222222221 0 0 01112456667888 8665554421110
Q ss_pred ------------CCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh-cCCcEEEecC
Q 017051 258 ------------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGH 324 (378)
Q Consensus 258 ------------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH 324 (378)
....+..++..+.|++ +++..+|+++|.+........ .. .......+.++ -++|++|+||
T Consensus 154 ~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~---~~~~~~~la~~~~~vD~IlgGH 226 (277)
T cd07410 154 WEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LT---GENAAYELAEEVPGIDAILTGH 226 (277)
T ss_pred ccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cC---CccHHHHHHhcCCCCcEEEeCC
Confidence 0112233444444443 356789999999865432100 01 11222344444 4899999999
Q ss_pred ccccceeecccCCCcCCCccEEEEeCCCCCCCCcccc
Q 017051 325 VHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARK 361 (378)
Q Consensus 325 ~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~ 361 (378)
.|...... ..++++.+-+|+-|...+....
T Consensus 227 sH~~~~~~-------~~~~~~v~q~g~~g~~vg~l~l 256 (277)
T cd07410 227 QHRRFPGP-------TVNGVPVVQPGNWGSHLGVIDL 256 (277)
T ss_pred CccccccC-------CcCCEEEEcCChhhCEEEEEEE
Confidence 99754321 1246777777777766554443
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-08 Score=91.61 Aligned_cols=197 Identities=17% Similarity=0.193 Sum_probs=104.6
Q ss_pred eEEEEEcccCCCC-----------ChHHHHHHhhcCCCc-EEEeccccccccchhh--hHHHHHHhhHhhhhCCceeecC
Q 017051 137 ITFAVAGDLGQTG-----------WTKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARPWMVTQ 202 (378)
Q Consensus 137 ~~f~~~gD~~~~~-----------~~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~P~~~v~ 202 (378)
++++.++|+|.-. .....++++.+.+++ +++.+||++....... ..+...+.++.+ -.-+.++
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l---~~d~~~~ 77 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNAL---GVDLACF 77 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhc---CCcEEee
Confidence 4678888886211 113456666667788 8999999986443211 112222333322 2346689
Q ss_pred CCCccCCCCcccchhhhchhcccCCC---C----CC-C--CCCCceEEEEeCCEE--EEEEcCcCCC------C---CcH
Q 017051 203 GNHEKESIPLIMDAFQSYNARWKMPF---E----ES-G--SNSNLYYSFDVAGAH--LIMLGSYADY------D---EYS 261 (378)
Q Consensus 203 GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~-~--~~~~~~ysf~~g~v~--fi~ldt~~~~------~---~~~ 261 (378)
||||+.... +.+....+....|. + .. . ..-..|..+..++++ |+++-+.... . ...
T Consensus 78 GNHefd~g~---~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~~~~~~ 154 (257)
T cd07406 78 GNHEFDFGE---DQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPEYVRYR 154 (257)
T ss_pred cccccccCH---HHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCCcceEc
Confidence 999995332 12222222111111 0 00 0 012467778888855 4555442110 0 012
Q ss_pred HHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCC
Q 017051 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDP 341 (378)
Q Consensus 262 ~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~ 341 (378)
+-.+.+++.+++.++.+...+|++.|.+... ...+.+.+ .++|++|+||.|...... .
T Consensus 155 d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~------------d~~la~~~--~~iD~IlgGH~H~~~~~~--------~ 212 (257)
T cd07406 155 DYVETARELVDELREQGADLIIALTHMRLPN------------DKRLAREV--PEIDLILGGHDHEYILVQ--------V 212 (257)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHHHHhC--CCCceEEecccceeEeee--------E
Confidence 3334444444333334678899999997421 01222222 479999999999865221 2
Q ss_pred CccEEEEeCCCCCCCCcccc
Q 017051 342 CGAVYITIGDGGNKEGLARK 361 (378)
Q Consensus 342 ~g~~yiv~G~gG~~~~~~~~ 361 (378)
++++.+-+|+-|...+....
T Consensus 213 ~~t~vv~~g~~g~~vg~l~l 232 (257)
T cd07406 213 GGTPIVKSGSDFRTVYIITL 232 (257)
T ss_pred CCEEEEeCCcCcceEEEEEE
Confidence 46777777877776554443
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.90 E-value=1e-08 Score=90.75 Aligned_cols=191 Identities=15% Similarity=0.087 Sum_probs=95.2
Q ss_pred EEEcccCCCCChH---HHHHHhh-c---CCCcEEEeccccccccc--h---hhhHHH-HHHhhHhhhhCCceeecCCCCc
Q 017051 140 AVAGDLGQTGWTK---STLDHIG-Q---CKYDVHLLPGDLSYADY--M---QHRWDT-FGELVQPLASARPWMVTQGNHE 206 (378)
Q Consensus 140 ~~~gD~~~~~~~~---~~~~~i~-~---~~~d~vi~~GDl~~~~~--~---~~~~~~-~~~~~~~l~~~~P~~~v~GNHD 206 (378)
+++||+|.+.... .....+. . .++|.++++||+++.-. . ...... +....+......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 4789999765422 2222322 2 58999999999996311 1 111111 2334444455699999999999
Q ss_pred cCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccC------CCCC
Q 017051 207 KESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDR------KKTP 280 (378)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~------~~~~ 280 (378)
..... . +........ .......+.+++.+++++-... ++.......|+...+..... .-..
T Consensus 81 ~~~~~-----~--~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (217)
T cd07398 81 FLLGD-----F--FAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYDQLLFLNRPLN 147 (217)
T ss_pred HHHHh-----H--HHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHHHHHHhcchHH
Confidence 94211 1 111110000 0111215677888888886532 22223344444433211000 0000
Q ss_pred --eEEEEeccc----cccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCC
Q 017051 281 --WLLVLLHVP----WYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (378)
Q Consensus 281 --~~iv~~H~P----~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~ 351 (378)
+.+...... ................+.+..++++++++++++||+|....... .+..|+.+|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~--------~~~~~~n~G~ 216 (217)
T cd07398 148 RRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHEL--------DGKLYINLGD 216 (217)
T ss_pred HHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEEE--------CCEEEEECCC
Confidence 000000000 00000000001123456667778889999999999998755431 3678888875
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=6.4e-08 Score=79.64 Aligned_cols=165 Identities=19% Similarity=0.241 Sum_probs=87.9
Q ss_pred CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEE
Q 017051 162 KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSF 241 (378)
Q Consensus 162 ~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf 241 (378)
.-|.|+..||+..+-..++. +.=++.+..+. -.-+.+.||||+... . .....+.+ |.. . --..-.|
T Consensus 43 ~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~LP--G~K~m~rGNHDYWw~-s----~skl~n~l--p~~--l--~~~n~~f 108 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEA-EEDLRFIGDLP--GTKYMIRGNHDYWWS-S----ISKLNNAL--PPI--L--FYLNNGF 108 (230)
T ss_pred hhhEEEecccchhheechhh-hhhhhhhhcCC--CcEEEEecCCccccc-h----HHHHHhhc--Cch--H--hhhccce
Confidence 34899999999865433221 11123444443 234679999999532 1 11111111 110 0 0011124
Q ss_pred EeCCEEEEEEcCc----CCCCCcHH--------HHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHH
Q 017051 242 DVAGAHLIMLGSY----ADYDEYSD--------QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIME 309 (378)
Q Consensus 242 ~~g~v~fi~ldt~----~~~~~~~~--------Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~ 309 (378)
.++++.+++.-.+ .++....+ ...-|+..+.++-++...-.|||+|.|+++..... ..+.
T Consensus 109 ~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~--------~~~s 180 (230)
T COG1768 109 ELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP--------GPFS 180 (230)
T ss_pred eEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC--------cchH
Confidence 5555444443221 11211122 22334442222223344558999999998765421 4567
Q ss_pred HHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCC
Q 017051 310 PLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (378)
Q Consensus 310 ~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~ 351 (378)
+++++++|+.++.||.|.-.|-.+-. .+-.|+-|+.+.+
T Consensus 181 evlee~rv~~~lyGHlHgv~~p~~~~---s~v~Gi~y~Lvaa 219 (230)
T COG1768 181 EVLEEGRVSKCLYGHLHGVPRPNIGF---SNVRGIEYMLVAA 219 (230)
T ss_pred HHHhhcceeeEEeeeccCCCCCCCCc---ccccCceEEEEec
Confidence 88889999999999999877644311 2345888876653
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=87.30 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=35.1
Q ss_pred HHHHHhh-cCCCcEEEeccccccccch-hhhHHHHH-HhhHhhh-------------------hCCceeecCCCCccCC
Q 017051 153 STLDHIG-QCKYDVHLLPGDLSYADYM-QHRWDTFG-ELVQPLA-------------------SARPWMVTQGNHEKES 209 (378)
Q Consensus 153 ~~~~~i~-~~~~d~vi~~GDl~~~~~~-~~~~~~~~-~~~~~l~-------------------~~~P~~~v~GNHD~~~ 209 (378)
.+.+.+. ..+||.|+++||+.+..-. .++|.... ++.+.+. ..+|++.++||||...
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3444443 6799999999999964211 34443322 2222121 1389999999999953
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.6e-07 Score=87.47 Aligned_cols=72 Identities=17% Similarity=0.129 Sum_probs=47.7
Q ss_pred eEEEEEcccCCCCCh-------------HHHHHHhhcCCCcEEEeccccccccch--hhhHHHHHH-hhHhhhh-CCcee
Q 017051 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGE-LVQPLAS-ARPWM 199 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~-~~~~l~~-~~P~~ 199 (378)
+||+.+||+|.+... ..+++.+.+.+||+||++||+.+.... ......... +++.+.. .+|++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 589999999976421 223344458899999999999976422 122222222 2344433 59999
Q ss_pred ecCCCCccC
Q 017051 200 VTQGNHEKE 208 (378)
Q Consensus 200 ~v~GNHD~~ 208 (378)
.++||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999984
|
|
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-07 Score=84.62 Aligned_cols=178 Identities=17% Similarity=0.143 Sum_probs=97.2
Q ss_pred EEEEcccCCCCChHHHHH---Hhh---cCCCcEEEeccccccccchh-----------hhHHHHHHhhHhhh-hCCceee
Q 017051 139 FAVAGDLGQTGWTKSTLD---HIG---QCKYDVHLLPGDLSYADYMQ-----------HRWDTFGELVQPLA-SARPWMV 200 (378)
Q Consensus 139 f~~~gD~~~~~~~~~~~~---~i~---~~~~d~vi~~GDl~~~~~~~-----------~~~~~~~~~~~~l~-~~~P~~~ 200 (378)
|++.||+|.. ...+.+ .++ ..++|++|++||+....... ..+..|...++... ..+|+++
T Consensus 1 i~v~Gd~HG~--~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGE--LDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCcc--HHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 5789999853 344433 322 35799999999995322111 12233333333332 2477899
Q ss_pred cCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCc-----eEEEEeCCEEEEEEcCcC---CCCC--------cHHHH
Q 017051 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNL-----YYSFDVAGAHLIMLGSYA---DYDE--------YSDQY 264 (378)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-----~ysf~~g~v~fi~ldt~~---~~~~--------~~~Q~ 264 (378)
|.||||-.. .+.. ++..+ ....+. ...+.+++++|..|.... ++.. ...++
T Consensus 79 i~GNHE~~~------~l~~------l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 79 IGGNHEASN------YLWE------LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred ECCCCCCHH------HHHh------hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 999999621 1111 11100 000122 234567899999997621 1111 12333
Q ss_pred HHHH-------HHhhhccCCCCCeEEEEeccccccCCCCCCC---------------CchHHHHHHHHHHHhcCCcEEEe
Q 017051 265 RWLK-------DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG---------------EGDGMMAIMEPLLYAASVDLVLA 322 (378)
Q Consensus 265 ~WL~-------~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~---------------~~~~~~~~l~~l~~~~~vdlvl~ 322 (378)
..+- ..|..... . --|+++|.||......... ........+..++++.++.++|+
T Consensus 146 rs~y~~r~~~~~kl~~~~~-~--vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQLKQ-P--IDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhcCC-C--CcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 2210 11222211 2 3699999998765432110 00113467889999999999999
Q ss_pred cCccc-cceeecc
Q 017051 323 GHVHA-YERSIRV 334 (378)
Q Consensus 323 GH~H~-y~r~~~~ 334 (378)
||.|. |++..|.
T Consensus 223 gH~H~~f~~~~~~ 235 (262)
T cd00844 223 AHLHVKFAALVPH 235 (262)
T ss_pred ecCCcccceecCC
Confidence 99998 6666554
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.3e-07 Score=79.74 Aligned_cols=153 Identities=19% Similarity=0.204 Sum_probs=92.6
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccc
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~ 215 (378)
++++++||+|.... .....+.....++|+|||+||.+..... ..+. .. + ..++++|.||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-~~l~---~~---~--~~~i~~V~GN~D~~~~~---- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-DALE---GG---L--AAKLIAVRGNCDGEVDQ---- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-HHhh---cc---c--ccceEEEEccCCCcccc----
Confidence 68999999997753 2344555567899999999999964432 1111 11 1 37899999999994210
Q ss_pred hhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC
Q 017051 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (378)
Q Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (378)
-..|. .-.+.+++ .+|.+.|--.+....
T Consensus 69 --------~~~p~---------~~~~~~~g-----------------------------------~ki~l~HGh~~~~~~ 96 (172)
T COG0622 69 --------EELPE---------ELVLEVGG-----------------------------------VKIFLTHGHLYFVKT 96 (172)
T ss_pred --------ccCCh---------hHeEEECC-----------------------------------EEEEEECCCcccccc
Confidence 00110 00111111 267777753332111
Q ss_pred CCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
....+..+-++.++|+++.||+|...... .+|+++|..|+-..+.+. ....|.++++++
T Consensus 97 --------~~~~l~~la~~~~~Dvli~GHTH~p~~~~--------~~~i~~vNPGS~s~pr~~----~~~sy~il~~~~ 155 (172)
T COG0622 97 --------DLSLLEYLAKELGADVLIFGHTHKPVAEK--------VGGILLVNPGSVSGPRGG----NPASYAILDVDN 155 (172)
T ss_pred --------CHHHHHHHHHhcCCCEEEECCCCcccEEE--------ECCEEEEcCCCcCCCCCC----CCcEEEEEEcCC
Confidence 12455566677789999999999865544 257888988876544322 122667766654
|
|
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.3e-08 Score=93.20 Aligned_cols=73 Identities=23% Similarity=0.251 Sum_probs=53.6
Q ss_pred eEEEEEcccCCC-CC-------------hHHHHHHhhcCCCcEEEeccccccccch-hhhHHHHHHhhHhhhh-CCceee
Q 017051 137 ITFAVAGDLGQT-GW-------------TKSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~-~~-------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 200 (378)
+||+..+|+|.+ .. ...+++.+.+.++||||++||+.+.... ...-..+.+.++.+.. .+|+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 589999999988 21 1235556678899999999999986554 2233445566666643 599999
Q ss_pred cCCCCccCC
Q 017051 201 TQGNHEKES 209 (378)
Q Consensus 201 v~GNHD~~~ 209 (378)
+.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999953
|
|
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.1e-07 Score=84.15 Aligned_cols=213 Identities=16% Similarity=0.141 Sum_probs=107.0
Q ss_pred eEEEEEcccCCCCC---------------hHHHHHHhhcCCCc-EEEeccccccccchhhhH---HHHHHhhHhhhhCCc
Q 017051 137 ITFAVAGDLGQTGW---------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRW---DTFGELVQPLASARP 197 (378)
Q Consensus 137 ~~f~~~gD~~~~~~---------------~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~~~---~~~~~~~~~l~~~~P 197 (378)
++|+.++|+|..-. ....++++.+.+++ +++.+||++........+ +...+.+..+. +-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g--~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG--VD 78 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC--Ce
Confidence 47888999973211 12345555555554 899999998644321111 11222222221 22
Q ss_pred eeecCCCCccCCCCcccchhhhchh----------------cccCCC---C----CC-CCCCCceEEEEeCCEE--EEEE
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNA----------------RWKMPF---E----ES-GSNSNLYYSFDVAGAH--LIML 251 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~----------------~~~~p~---~----~~-~~~~~~~ysf~~g~v~--fi~l 251 (378)
+.++||||++.... .+..+.+ .-..|. + .. ...-..|.-++.++++ ||++
T Consensus 79 -a~t~GNHefd~G~~---~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~~~py~i~~~~G~kIgviGl 154 (288)
T cd07412 79 -ASAVGNHEFDEGYA---ELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPALPPYTIKDVGGVKVGFIGA 154 (288)
T ss_pred -eeeecccccccCHH---HHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcccCCEEEEEECCEEEEEEee
Confidence 56889999964321 1111111 000111 0 00 0111345557788855 4555
Q ss_pred cCcCC-C--C-------CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh--cCCcE
Q 017051 252 GSYAD-Y--D-------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVDL 319 (378)
Q Consensus 252 dt~~~-~--~-------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~vdl 319 (378)
-+... . . ......+.+++.+++.+.++.+.+|+++|.............. .......++.+ -++|+
T Consensus 155 ~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~--~~~~~~~l~~~~~~~iD~ 232 (288)
T cd07412 155 VTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDTCSA--ASGPIADIVNRLDPDVDV 232 (288)
T ss_pred cCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCccccc--cChhHHHHHhhcCCCCCE
Confidence 32110 0 0 0122334455555554434677899999987653222110000 11122344444 37999
Q ss_pred EEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccc
Q 017051 320 VLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKY 362 (378)
Q Consensus 320 vl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~ 362 (378)
+|+||.|...... . ...++++.+-+|+-|...+.....
T Consensus 233 IlgGHsH~~~~~~-~----~~~~~~~v~q~g~~g~~vg~i~l~ 270 (288)
T cd07412 233 VFAGHTHQAYNCT-V----PAGNPRLVTQAGSYGKAVADVDLT 270 (288)
T ss_pred EEeCccCcccccc-c----cCcCCEEEEecChhhceeEEEEEE
Confidence 9999999865321 1 112578888888888776655443
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.7e-07 Score=83.99 Aligned_cols=209 Identities=16% Similarity=0.151 Sum_probs=103.1
Q ss_pred eEEEEEcccCCCCC-----------hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCC
Q 017051 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 205 (378)
++++.++|+|..-. ....++++++.++++++.+||++..... ..+..-...++.+...-.-+.++|||
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~ln~~g~d~~~~GNH 79 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI-SDLDKGETIIKIMNAVGYDAVTPGNH 79 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh-hhhcCCcHHHHHHHhcCCcEEccccc
Confidence 47899999985311 1234455544467899999999864332 11111111222222222233578999
Q ss_pred ccCCCCcccchhhhchhcccCCCC-------CCCC-CCCceEEEEeC-C--EEEEEEcCcC-CC----C--C---cHHHH
Q 017051 206 EKESIPLIMDAFQSYNARWKMPFE-------ESGS-NSNLYYSFDVA-G--AHLIMLGSYA-DY----D--E---YSDQY 264 (378)
Q Consensus 206 D~~~~~~~~~~~~~~~~~~~~p~~-------~~~~-~~~~~ysf~~g-~--v~fi~ldt~~-~~----~--~---~~~Q~ 264 (378)
|+.... +.+..+.+.+..|.- ..+. .-..|.-++.+ + +-||++-+.. .. . . ..+-.
T Consensus 80 efd~G~---~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~~~d~~ 156 (257)
T cd07408 80 EFDYGL---DRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKDVTFEDPI 156 (257)
T ss_pred cccCCH---HHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCCcEEecHH
Confidence 995332 233333333322220 0010 01234455677 6 4555554421 00 0 0 01222
Q ss_pred HHHHHH-hhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCc
Q 017051 265 RWLKDD-LSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343 (378)
Q Consensus 265 ~WL~~~-L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g 343 (378)
+-+++. ....++++.+.+|++.|.+........ ....+.. .-.++|++|.||.|........ ..++
T Consensus 157 ~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~~------~~~~la~--~~~giDvIigGH~H~~~~~~~~-----~~~~ 223 (257)
T cd07408 157 EEAKKVIVAALKAKGADVIVALGHLGVDRTSSPW------TSTELAA--NVTGIDLIIDGHSHTTIEIGKK-----DGNN 223 (257)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCCc------cHHHHHH--hCCCceEEEeCCCcccccCccc-----ccCC
Confidence 333333 222222367789999998865432110 1122222 1248999999999986543210 1246
Q ss_pred cEEEEeCCCCCCCCccccc
Q 017051 344 AVYITIGDGGNKEGLARKY 362 (378)
Q Consensus 344 ~~yiv~G~gG~~~~~~~~~ 362 (378)
++.+-+|.-|...+.....
T Consensus 224 ~~ivq~g~~g~~vg~l~l~ 242 (257)
T cd07408 224 VLLTQTGAYLANIGEVTLV 242 (257)
T ss_pred eEEEcCChHHceEEEEEEE
Confidence 6666666666655544433
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.6e-07 Score=82.79 Aligned_cols=183 Identities=18% Similarity=0.151 Sum_probs=94.3
Q ss_pred HHHHHhhcC-CCcEE-EeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCC--
Q 017051 153 STLDHIGQC-KYDVH-LLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF-- 228 (378)
Q Consensus 153 ~~~~~i~~~-~~d~v-i~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~-- 228 (378)
..++++.+. ++|.+ +.+||+...... ..+......++.+ ...++.++.||||+.... +.+....+.+..|.
T Consensus 40 ~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~~~l-~~~g~da~~GNHefd~g~---~~l~~~~~~~~~~~l~ 114 (264)
T cd07411 40 TLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMVDAL-NALGVDAMVGHWEFTYGP---ERVRELFGRLNWPFLA 114 (264)
T ss_pred HHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHHHHH-HhhCCeEEecccccccCH---HHHHHHHhhCCCCEEE
Confidence 455666666 89977 579999965432 1121111222222 235666555999996432 22332333322221
Q ss_pred -C----CCC-CCCCceEEEEeCCE--EEEEEcCcCCCC-------C---cHHHHHHHHHHhhhcc-CCCCCeEEEEeccc
Q 017051 229 -E----ESG-SNSNLYYSFDVAGA--HLIMLGSYADYD-------E---YSDQYRWLKDDLSKVD-RKKTPWLLVLLHVP 289 (378)
Q Consensus 229 -~----~~~-~~~~~~ysf~~g~v--~fi~ldt~~~~~-------~---~~~Q~~WL~~~L~~~~-~~~~~~~iv~~H~P 289 (378)
+ ..+ ..-..|..++.+++ .+|++.+..... . .....+.+++.+.+.. ..+...+|++.|-+
T Consensus 115 aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g 194 (264)
T cd07411 115 ANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNG 194 (264)
T ss_pred EEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 0 000 01134556778875 455554421100 0 1233455555533332 23567899999987
Q ss_pred cccCCCCCCCCchHHHHHHHHHHHh-cCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccc
Q 017051 290 WYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~ 360 (378)
.... . .+.++ .++|++|+||.|..... |. ...++++.+-+|.-|..-+...
T Consensus 195 ~~~~------------~---~la~~~~~iDlilgGH~H~~~~~-~~----~~~~~t~v~~~g~~~~~vg~i~ 246 (264)
T cd07411 195 LPVD------------V---ELAERVPGIDVILSGHTHERTPK-PI----IAGGGTLVVEAGSHGKFLGRLD 246 (264)
T ss_pred chhh------------H---HHHhcCCCCcEEEeCcccccccC-cc----cccCCEEEEEcCccccEEEEEE
Confidence 4310 1 22223 47999999999974322 11 1125777787887776554443
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.60 E-value=4.2e-06 Score=75.64 Aligned_cols=186 Identities=16% Similarity=0.198 Sum_probs=103.3
Q ss_pred eEEEEEcccCCCCChH----HHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhh-CCceeecCCCCccCCC
Q 017051 137 ITFAVAGDLGQTGWTK----STLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKESI 210 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~~~ 210 (378)
+|++++||.= +.... ..+..++ +.++||+|..||.+-.+.. .. .. ..+.|.. .+-++.+ |||+++..
T Consensus 1 m~ilfiGDi~-G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~G-i~-~~---~~~~L~~~GvDviT~-GNH~~Dkg 73 (266)
T TIGR00282 1 IKFLFIGDVY-GKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKG-LT-LK---IYEFLKQSGVNYITM-GNHTWFQK 73 (266)
T ss_pred CeEEEEEecC-CHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCC-CC-HH---HHHHHHhcCCCEEEc-cchhccCc
Confidence 4799999982 32222 3444444 5678999999999854311 11 11 2222222 2666655 99999643
Q ss_pred CcccchhhhchhcccCCCCC-CCCCCCceEEEEeCCEEEEEEcCc--CCCCC--cHHHHHHHHHHhhhccCCCCCeEEEE
Q 017051 211 PLIMDAFQSYNARWKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSY--ADYDE--YSDQYRWLKDDLSKVDRKKTPWLLVL 285 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~-~~~~~~~~ysf~~g~v~fi~ldt~--~~~~~--~~~Q~~WL~~~L~~~~~~~~~~~iv~ 285 (378)
.. ........ +.-.|.+- ....+..+..+..++.++-+++-. ..... ...-++-+++.+++.+. +++.+||.
T Consensus 74 e~-~~~i~~~~-~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk~-~~d~IIVd 150 (266)
T TIGR00282 74 LI-LDVVINQK-DLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLKK-DCDLIFVD 150 (266)
T ss_pred HH-HHHHhccc-cccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhhc-CCCEEEEE
Confidence 11 00111111 11122221 112234566678887666555532 11111 12233445555555543 46789999
Q ss_pred eccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEe
Q 017051 286 LHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITI 349 (378)
Q Consensus 286 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~ 349 (378)
+|.-.. ..+.....+-+.+|++|+.-|+|.-.-...+. |+|+-||+-
T Consensus 151 ~Haeat------------sEK~a~~~~ldg~vsaVvGtHtHV~TaD~~il-----~~gtayitD 197 (266)
T TIGR00282 151 FHAETT------------SEKNAFGMAFDGYVTAVVGTHTHVPTADLRIL-----PKGTAYITD 197 (266)
T ss_pred eCCCCH------------HHHHHHHHHhCCCccEEEeCCCCCCCCcceeC-----CCCCEEEec
Confidence 997531 12455677788899999999999865444443 578888763
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.2e-06 Score=76.24 Aligned_cols=183 Identities=16% Similarity=0.185 Sum_probs=96.8
Q ss_pred EEEEEcccCCCCCh----HHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCc
Q 017051 138 TFAVAGDLGQTGWT----KSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (378)
Q Consensus 138 ~f~~~gD~~~~~~~----~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 212 (378)
|++++||+ .+... ...+.+++ +.++||+|..||.+-.+.... ....+.+..+ .+-+ .+.|||+++..
T Consensus 1 ~ilfigdi-~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~--~~~~~~L~~~--G~D~-iTlGNH~fD~g-- 72 (255)
T cd07382 1 KILFIGDI-VGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGIT--PKIAKELLSA--GVDV-ITMGNHTWDKK-- 72 (255)
T ss_pred CEEEEEeC-CCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCC--HHHHHHHHhc--CCCE-EEecccccCcc--
Confidence 58899998 22222 23444444 567999999999986542111 1112222222 1444 45699999643
Q ss_pred ccchhhhchhcc---cCCCCCC-CCCCCceEEEEeCCEEEEEEcCc--CCCCCcHHHHHHHHHHhhhccCCCCCeEEEEe
Q 017051 213 IMDAFQSYNARW---KMPFEES-GSNSNLYYSFDVAGAHLIMLGSY--ADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (378)
Q Consensus 213 ~~~~~~~~~~~~---~~p~~~~-~~~~~~~ysf~~g~v~fi~ldt~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (378)
....+.+.. -.|.+-. ......|..++.+++++-+++-. ........-++-+++.+++.+. +.+.+||.+
T Consensus 73 ---el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D~IIV~~ 148 (255)
T cd07382 73 ---EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EADIIFVDF 148 (255)
T ss_pred ---hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCCEEEEEE
Confidence 122222222 1122211 11234577788887665554432 1111112234446666666544 567899999
Q ss_pred ccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEe
Q 017051 287 HVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITI 349 (378)
Q Consensus 287 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~ 349 (378)
|.-..+ ....+.. .-..+||+++.||+|...-...+ -|+|+.|++.
T Consensus 149 H~g~ts-----------Ek~ala~-~ldg~VdvIvGtHTHv~t~d~~i-----l~~gTa~itd 194 (255)
T cd07382 149 HAEATS-----------EKIALGW-YLDGRVSAVVGTHTHVQTADERI-----LPGGTAYITD 194 (255)
T ss_pred CCCCCH-----------HHHHHHH-hCCCCceEEEeCCCCccCCccEE-----eeCCeEEEec
Confidence 985311 1122332 22336999999999985333322 2468887754
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.1e-06 Score=81.06 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=81.1
Q ss_pred HHHHHhhcCCCc-EEEeccccccccchhh--hHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCC
Q 017051 153 STLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE 229 (378)
Q Consensus 153 ~~~~~i~~~~~d-~vi~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~ 229 (378)
..++++.+.+++ +++.+||+........ ..+...+.+..+. .. +.++||||++.... .+..+.+....|.-
T Consensus 39 ~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~g--~D-~~~lGNHefd~G~~---~l~~~~~~~~~p~l 112 (281)
T cd07409 39 TLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLLG--YD-AMTLGNHEFDDGVE---GLAPFLNNLKFPVL 112 (281)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhcC--CC-EEEeccccccCCHH---HHHHHHHhCCCCEE
Confidence 345555556677 5566999986543211 1122222333221 33 45679999964322 22222222222210
Q ss_pred ------CC-----CCCCCceEEEEeCCEE--EEEEcCcCC--CC---C---cHHHHHHHHHHhhhccCCCCCeEEEEecc
Q 017051 230 ------ES-----GSNSNLYYSFDVAGAH--LIMLGSYAD--YD---E---YSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (378)
Q Consensus 230 ------~~-----~~~~~~~ysf~~g~v~--fi~ldt~~~--~~---~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (378)
.. ...-..|..++.++++ ||++-+... .. . ..+..+.+++.+++.+.++...+|++.|.
T Consensus 113 ~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~ 192 (281)
T cd07409 113 SANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHS 192 (281)
T ss_pred EEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 00 0011345667888855 455543210 00 0 12344567776666554467789999998
Q ss_pred ccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
+... ...+.+.+ -++|++|+||.|...
T Consensus 193 G~~~------------d~~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 193 GYEV------------DKEIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred Cchh------------HHHHHHcC--CCCcEEEeCCcCccc
Confidence 7321 12222222 479999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.8e-07 Score=80.28 Aligned_cols=67 Identities=18% Similarity=0.107 Sum_probs=41.7
Q ss_pred EEcccCCCCChH----HHHHHhhc--CCCcEEEeccccccccchhhhHHHHH----HhhHhhhhC-CceeecCCCCcc
Q 017051 141 VAGDLGQTGWTK----STLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFG----ELVQPLASA-RPWMVTQGNHEK 207 (378)
Q Consensus 141 ~~gD~~~~~~~~----~~~~~i~~--~~~d~vi~~GDl~~~~~~~~~~~~~~----~~~~~l~~~-~P~~~v~GNHD~ 207 (378)
++||.|.+.... -.++-+.. .+.|.+.++||+++.=-....|.+.. ..+..+..+ +|+++++||||+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~Df 79 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNHDF 79 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCchHH
Confidence 689999884322 23333433 35699999999985322122344332 233334444 999999999997
|
|
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-06 Score=87.21 Aligned_cols=75 Identities=12% Similarity=0.221 Sum_probs=52.6
Q ss_pred CCCeEEEEEcccCCCCCh------HHHHHHhh---------cCCCcEEEeccccccccch-------------hhhHHHH
Q 017051 134 QFPITFAVAGDLGQTGWT------KSTLDHIG---------QCKYDVHLLPGDLSYADYM-------------QHRWDTF 185 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------~~~~~~i~---------~~~~d~vi~~GDl~~~~~~-------------~~~~~~~ 185 (378)
..+.+++++||+|.+... +..++.+. ..+++.+|++||+++..+. ....+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 457899999999976531 23344444 5679999999999964221 0122345
Q ss_pred HHhhHhhhhCCceeecCCCCccC
Q 017051 186 GELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 186 ~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
.+.++.+...+|+++++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 55667776678999999999984
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.9e-07 Score=80.92 Aligned_cols=64 Identities=23% Similarity=0.200 Sum_probs=41.7
Q ss_pred EEEEEcccCCCCC-hHHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 138 TFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
|++++||+|.... ..++++.+. ..++|.++++||+++.+.... +.++.+.. .+++++.||||..
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~------~~~~~l~~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESL------ACLELLLE-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHH------HHHHHHhc-CCEEEeECCChHH
Confidence 6899999985421 233444443 246899999999997654321 22232322 4688999999983
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.3e-07 Score=81.51 Aligned_cols=166 Identities=16% Similarity=0.077 Sum_probs=81.8
Q ss_pred EEEcccCCCCC-hHHHHHHhh--------cCCCcEEEeccccccccchhh-hHHHHHHhhHhh-hhCCceeecCCCCccC
Q 017051 140 AVAGDLGQTGW-TKSTLDHIG--------QCKYDVHLLPGDLSYADYMQH-RWDTFGELVQPL-ASARPWMVTQGNHEKE 208 (378)
Q Consensus 140 ~~~gD~~~~~~-~~~~~~~i~--------~~~~d~vi~~GDl~~~~~~~~-~~~~~~~~~~~l-~~~~P~~~v~GNHD~~ 208 (378)
+++||+|.... ..++++.+. ..+.|.++++||+++.+.... ..+.+.+..... ....+++.++||||..
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 47999986632 334454443 246899999999998655322 222222222111 1236899999999984
Q ss_pred CCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecc
Q 017051 209 SIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (378)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (378)
.... . + ++..+. ....+. .........+.......+||++.-..... + .+++.|.
T Consensus 81 ~l~~----~--~--~~~~~~--------~~~~~~-----~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~---~~~fvHa 135 (208)
T cd07425 81 NLCG----D--F--RYVHPK--------YFNEFG-----GLAMRRRELFSPGGELGRWLRSKPVIVKV-N---DTLFVHG 135 (208)
T ss_pred HHcc----h--h--ccCChh--------HHHHHH-----hhhhhHHHhcCCccHHHHHHHhCCeEEEE-C---CEEEEeC
Confidence 2110 0 0 000010 000000 00000011112233457888765333322 1 2566787
Q ss_pred ccccCC--CCCCCCch--HHHHHHHHHHHhcCCcEEEecCccccce
Q 017051 289 PWYNSN--EAHQGEGD--GMMAIMEPLLYAASVDLVLAGHVHAYER 330 (378)
Q Consensus 289 P~~~~~--~~~~~~~~--~~~~~l~~l~~~~~vdlvl~GH~H~y~r 330 (378)
.+-... ........ .....+..+|+.++.+++++||+|....
T Consensus 136 g~~~~w~r~y~~~~~~~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~ 181 (208)
T cd07425 136 GLGPLWYRGYSKETSDKECAAAHLDKVLERLGAKRMVVGHTPQEGG 181 (208)
T ss_pred CcHHHHhhHhhhhhhhccchHHHHHHHHHHcCCCeEEEcCeeeecC
Confidence 541110 00000000 0112577889999999999999998543
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.4e-06 Score=82.16 Aligned_cols=113 Identities=19% Similarity=0.166 Sum_probs=73.7
Q ss_pred CCCeEEEEEcccCCCCCh------------------HHHHHHh-hcCCCcEEEeccccccccch--hhhHHHHHHhhHhh
Q 017051 134 QFPITFAVAGDLGQTGWT------------------KSTLDHI-GQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPL 192 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~------------------~~~~~~i-~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l 192 (378)
...++++.++|+|.-+.. ......+ ...+||.++++||+.+++.. .++|.+..+.++++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkI 125 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKI 125 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHh
Confidence 578999999999865411 1122222 26799999999999986544 56676544445544
Q ss_pred hh---CCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcC
Q 017051 193 AS---ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYA 255 (378)
Q Consensus 193 ~~---~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~ 255 (378)
.. .+|++.++||||.+.... .......+|..-. ++....|++|+..|+++|+..
T Consensus 126 f~~k~~~~~~~i~GNhDIGf~~~---~~~~~i~Rfe~~f------g~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 126 FGRKGNIKVIYIAGNHDIGFGNE---LIPEWIDRFESVF------GPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred hCCCCCCeeEEeCCccccccccc---cchhHHHHHHHhh------cchhhhhccCCceeEEeeehh
Confidence 33 499999999999964332 1122223332111 235667899999999999864
|
|
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.7e-07 Score=82.09 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=50.9
Q ss_pred eEEEEEcccCCCCCh-------------HHHHHHhhcCCCcEEEeccccccccchh-hhHHHHHHhhHhhhh-C-Cceee
Q 017051 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQ-HRWDTFGELVQPLAS-A-RPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vi~~GDl~~~~~~~-~~~~~~~~~~~~l~~-~-~P~~~ 200 (378)
+||+.++|+|.+... ..+++.+.+.++|+||++||+.+..... .....+.+.++.+.. . +|+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 589999999976421 2344445578999999999999865432 223344556666644 3 89999
Q ss_pred cCCCCccC
Q 017051 201 TQGNHEKE 208 (378)
Q Consensus 201 v~GNHD~~ 208 (378)
++||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.2e-05 Score=72.15 Aligned_cols=201 Identities=18% Similarity=0.224 Sum_probs=99.7
Q ss_pred CCeEEEEEcccCCCCC--------------hHHHHHHhh----cCCCc-EEEeccccccccchhh----hHHHHHHhhHh
Q 017051 135 FPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQH----RWDTFGELVQP 191 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~--------------~~~~~~~i~----~~~~d-~vi~~GDl~~~~~~~~----~~~~~~~~~~~ 191 (378)
.+++|+..+|+|..-. ..+.++++. +.+++ +++.+||+........ .+....+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~--- 80 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPI--- 80 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHH---
Confidence 4689999999984311 022233332 34555 6778999986543211 22222222
Q ss_pred hhhCCce-eecCCCCccCCCCcccchhhhchhcccCCC---C---CC---C--CCCCceEEEEeC-CEE--EEEEcCcCC
Q 017051 192 LASARPW-MVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ES---G--SNSNLYYSFDVA-GAH--LIMLGSYAD 256 (378)
Q Consensus 192 l~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~~---~--~~~~~~ysf~~g-~v~--fi~ldt~~~ 256 (378)
+..+++ ..++||||++......+.+..+.+....|. | .. . .....|..+..+ +++ +|++-+...
T Consensus 81 -mN~mgyDa~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~ 159 (282)
T cd07407 81 -FRMMPYDLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFK 159 (282)
T ss_pred -HHhcCCcEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecccc
Confidence 333343 468999999533211011111212111121 0 00 0 011235556765 655 555533211
Q ss_pred -------CCCcHHHH--HHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCc-EEEecCc
Q 017051 257 -------YDEYSDQY--RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVD-LVLAGHV 325 (378)
Q Consensus 257 -------~~~~~~Q~--~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vd-lvl~GH~ 325 (378)
+....+.. +|+.+.|++ ++.+.+|+++|....... . ..+....+.++. ++| ++|+||+
T Consensus 160 ~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~GHs 228 (282)
T cd07407 160 GAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLGGHS 228 (282)
T ss_pred cCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEeCCc
Confidence 11112222 477777764 256779999999864321 0 111112233344 567 7999999
Q ss_pred cccceeecccCCCcCCCccEEEEeCCCCCCCC
Q 017051 326 HAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357 (378)
Q Consensus 326 H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~ 357 (378)
|...... + .+++..+-+|.-|...|
T Consensus 229 H~~~~~~-~------~~~~~ivq~G~~g~~lg 253 (282)
T cd07407 229 HVRDFTQ-Y------DSSSTGLESGRYLETVG 253 (282)
T ss_pred cccccee-c------cCcEEEEeccchhhceE
Confidence 9753321 1 14666676676665544
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.9e-06 Score=74.12 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=46.2
Q ss_pred EEEcccCCCCCh------HHHHHHhhcC-----CCcEEEeccccccccch-------------hhhHHHHHHhhHhhhhC
Q 017051 140 AVAGDLGQTGWT------KSTLDHIGQC-----KYDVHLLPGDLSYADYM-------------QHRWDTFGELVQPLASA 195 (378)
Q Consensus 140 ~~~gD~~~~~~~------~~~~~~i~~~-----~~d~vi~~GDl~~~~~~-------------~~~~~~~~~~~~~l~~~ 195 (378)
+++||+|.+... +..++.+... ++|.||++||+++.... ...+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 678999975431 2233334332 57999999999975210 11234455666777667
Q ss_pred CceeecCCCCccC
Q 017051 196 RPWMVTQGNHEKE 208 (378)
Q Consensus 196 ~P~~~v~GNHD~~ 208 (378)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999984
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.8e-06 Score=91.03 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=104.9
Q ss_pred CCeEEEEEcccCCCC----ChHHHHHHhhcCCCcEEEe-ccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCC
Q 017051 135 FPITFAVAGDLGQTG----WTKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~----~~~~~~~~i~~~~~d~vi~-~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 209 (378)
.+++|+.++|+|..- +....++++.+.+|+.+++ +||++..... ..+......++.+..--.-+.++||||+..
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~-~~~~~g~~~~~~ln~lg~d~~~~GNHEfd~ 737 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY-SNLLKGLPVLKMMKEMGYDASTFGNHEFDW 737 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch-hhhcCChHHHHHHhCcCCCEEEeccccccc
Confidence 459999999998432 1234566666778888766 9999865432 111111112222222123356999999954
Q ss_pred CCcccchhhhchhccc------------CCC---C----CCCC---CCCceEEEEeCCEE--EEEEcCcC-C-C---C--
Q 017051 210 IPLIMDAFQSYNARWK------------MPF---E----ESGS---NSNLYYSFDVAGAH--LIMLGSYA-D-Y---D-- 258 (378)
Q Consensus 210 ~~~~~~~~~~~~~~~~------------~p~---~----~~~~---~~~~~ysf~~g~v~--fi~ldt~~-~-~---~-- 258 (378)
... .+..+...-. .|. | ..+. .-..|.-++.++++ ||++-+.. . . .
T Consensus 738 g~~---~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p~~~ 814 (1163)
T PRK09419 738 GPD---VLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSPGNV 814 (1163)
T ss_pred ChH---HHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCCCCc
Confidence 321 1111111100 111 0 0111 11345666788754 55554321 0 0 0
Q ss_pred ---CcHHHHHHHHHHhhhcc-CCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeec
Q 017051 259 ---EYSDQYRWLKDDLSKVD-RKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIR 333 (378)
Q Consensus 259 ---~~~~Q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~ 333 (378)
.-.+..+.+++..++.+ .++...+|+++|......... +. ....++.++. +||++|.||+|..-...
T Consensus 815 ~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA~~v~gIDvIigGHsH~~~~~~- 886 (1163)
T PRK09419 815 KNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELAKKVKGVDAIISAHTHTLVDKV- 886 (1163)
T ss_pred CCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHHHhCCCCCEEEeCCCCcccccc-
Confidence 01233344444444443 236778999999986532211 11 1233444443 79999999999753211
Q ss_pred ccCCCcCCCccEEEEeCCCCCCCC
Q 017051 334 VNNGKPDPCGAVYITIGDGGNKEG 357 (378)
Q Consensus 334 ~~~~~~~~~g~~yiv~G~gG~~~~ 357 (378)
.++++.+-+|+-|...+
T Consensus 887 -------v~~~~ivqag~~g~~vg 903 (1163)
T PRK09419 887 -------VNGTPVVQAYKYGRALG 903 (1163)
T ss_pred -------CCCEEEEeCChhHcEEE
Confidence 14566666666665433
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.1e-06 Score=77.97 Aligned_cols=73 Identities=21% Similarity=0.111 Sum_probs=46.7
Q ss_pred EECCCCCCCeEEEEEcccCCCC-ChHHHHHHhhc-CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCC
Q 017051 128 FKTPPAQFPITFAVAGDLGQTG-WTKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (378)
Q Consensus 128 F~t~p~~~~~~f~~~gD~~~~~-~~~~~~~~i~~-~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 205 (378)
|+..+.+.--|++++||+|... ...++++.+.. .+.|-++++||+++.+....+ .++-+.. ..+..+.|||
T Consensus 8 ~~~~~~~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~------vl~~l~~-~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAGHQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLR------CLQLLEE-HWVRAVRGNH 80 (218)
T ss_pred eecccCCCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHH------HHHHHHc-CCceEeeCch
Confidence 4444433334899999998653 23456666653 368999999999986653221 2222222 3467899999
Q ss_pred cc
Q 017051 206 EK 207 (378)
Q Consensus 206 D~ 207 (378)
|.
T Consensus 81 E~ 82 (218)
T PRK11439 81 EQ 82 (218)
T ss_pred HH
Confidence 97
|
|
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.5e-05 Score=73.70 Aligned_cols=184 Identities=21% Similarity=0.232 Sum_probs=86.9
Q ss_pred eEEEEEcccCCCCC-----------hHHHHHHhhc-----CCCcEEEeccccccccchhhhH---HHHHHhhHhhhhCCc
Q 017051 137 ITFAVAGDLGQTGW-----------TKSTLDHIGQ-----CKYDVHLLPGDLSYADYMQHRW---DTFGELVQPLASARP 197 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-----------~~~~~~~i~~-----~~~d~vi~~GDl~~~~~~~~~~---~~~~~~~~~l~~~~P 197 (378)
++++..+|+|..-. ....++++++ ...-+++.+||+...... ..+ ....+.+..+. .-
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-~~~~~g~~~~~~~n~~g--~D 77 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLVG--YD 77 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-HHhcCcchHHHHHHhhC--Cc
Confidence 47888999975421 1234455443 233588999999853322 111 11112222221 23
Q ss_pred eeecCCCCccCCCCcccchhhhchhcccCCC---C---CCC-CCCCceEEEEeCCEEE--EEEcCcC-CC--C----Cc-
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESG-SNSNLYYSFDVAGAHL--IMLGSYA-DY--D----EY- 260 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~~~-~~~~~~ysf~~g~v~f--i~ldt~~-~~--~----~~- 260 (378)
..++||||++.... .+....+....|. + ..+ .....|.-++.+++++ |++-+.. .. . .+
T Consensus 78 -a~~~GNHEfD~G~~---~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgviG~t~~~~~~~~~~~~~~~~ 153 (285)
T cd07405 78 -AMAVGNHEFDNPLE---VLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVIGLTTDDTAKIGNPAYFEGI 153 (285)
T ss_pred -EEeecccccccCHH---HHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEEEecccccccccCcCCcCCc
Confidence 44779999964322 2222111111111 0 001 1123466677887664 4443311 00 0 00
Q ss_pred --HHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 261 --SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 261 --~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
.+..+=+++.+++.+.++...+|+++|......... .........+.+.+...++|++|.||.|...
T Consensus 154 ~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~--~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 154 EFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEH--GSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred EEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccc--cccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 112222333333332235678999999987532211 1100111233333333589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.5e-06 Score=71.83 Aligned_cols=119 Identities=17% Similarity=0.111 Sum_probs=75.5
Q ss_pred EEEcccCCCCChHHHHHHhh-----cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 140 AVAGDLGQTGWTKSTLDHIG-----QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 140 ~~~gD~~~~~~~~~~~~~i~-----~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
+++||.+.. .++++++++ +.+.|++|++||+.-.......|..+..-. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g~--~~~pipTyf~ggn~~-------- 68 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDGS--KKVPIPTYFLGGNNP-------- 68 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcCC--ccCCCCEEEECCCCC--------
Confidence 367887643 344555442 456899999999986544333344433322 223489999999996
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCC
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (378)
+.-|+++|.|++...
T Consensus 69 -----------------------------------------------------------------~~DILlTh~wP~gi~ 83 (150)
T cd07380 69 -----------------------------------------------------------------GVDILLTSEWPKGIS 83 (150)
T ss_pred -----------------------------------------------------------------CCCEEECCCCchhhh
Confidence 225888888886643
Q ss_pred CCCC-----CCchHHHHHHHHHHHhcCCcEEEecCccc-cceeecccC
Q 017051 295 EAHQ-----GEGDGMMAIMEPLLYAASVDLVLAGHVHA-YERSIRVNN 336 (378)
Q Consensus 295 ~~~~-----~~~~~~~~~l~~l~~~~~vdlvl~GH~H~-y~r~~~~~~ 336 (378)
.... .........+.+++++.++.+.||||.|. |+| .|..+
T Consensus 84 ~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer-~Pf~~ 130 (150)
T cd07380 84 KLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYER-EPYRN 130 (150)
T ss_pred hhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEee-cCccC
Confidence 2110 01112347778889999999999999995 555 45543
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.3e-07 Score=75.03 Aligned_cols=42 Identities=24% Similarity=0.272 Sum_probs=29.0
Q ss_pred CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 161 CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 161 ~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
.++|.||++||++........ .+.++.+ ..|++.|+||||..
T Consensus 41 ~~~d~vi~~GDl~~~~~~~~~----~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 41 GPDDTVYHLGDFSFGGKAGTE----LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCCEEEEeCCCCCCCChHHH----HHHHHhC--CCCeEEEeCCCCch
Confidence 368999999999975543221 2233333 26899999999983
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-06 Score=84.52 Aligned_cols=72 Identities=15% Similarity=0.196 Sum_probs=49.5
Q ss_pred eEEEEEcccCCCCCh-------------HHHHHHhhcCCCcEEEeccccccccchhhh-HHHHHHhhHhhhh-CCceeec
Q 017051 137 ITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQHR-WDTFGELVQPLAS-ARPWMVT 201 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~-~~~~~~~~~~l~~-~~P~~~v 201 (378)
+||+.++|+|.+... ..+++.+.+.+||+||++||+.+....... ...+.+++..+.. .+|++++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v~~I 80 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQLVVL 80 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 589999999986321 123444568899999999999976443221 1233444455543 3899999
Q ss_pred CCCCccC
Q 017051 202 QGNHEKE 208 (378)
Q Consensus 202 ~GNHD~~ 208 (378)
+||||..
T Consensus 81 ~GNHD~~ 87 (407)
T PRK10966 81 AGNHDSV 87 (407)
T ss_pred cCCCCCh
Confidence 9999984
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.2e-06 Score=74.84 Aligned_cols=64 Identities=20% Similarity=0.195 Sum_probs=42.6
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
-|++++||+|... ..+++++.+. ..+.|.++++||+++.+....+ .++.+.. ..++.+.||||.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~------~l~~l~~-~~~~~v~GNHE~ 80 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLN------VLRLLNQ-PWFISVKGNHEA 80 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHH------HHHHHhh-CCcEEEECchHH
Confidence 4899999998653 2344555554 4578999999999986553221 2222222 356789999997
|
|
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.1e-05 Score=71.50 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=25.5
Q ss_pred CCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccc
Q 017051 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (378)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~ 329 (378)
+...+|+++|..-+. . + ..+.++. ++|++|.||+|..-
T Consensus 207 gvD~II~LsH~g~~~-------~-d------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 207 GINKIILLSHLQQIS-------I-E------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCEEEEEecccccc-------h-H------HHHHhcCCCCCEEEeCCCCccC
Confidence 567799999984211 0 0 1234443 79999999999863
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.8e-05 Score=78.07 Aligned_cols=213 Identities=17% Similarity=0.162 Sum_probs=112.9
Q ss_pred CCCeEEEEEcccCCCCC------------h----HHHHHHhhcC-CCcEEEeccccccccchhhh---HHHHHHhhHhhh
Q 017051 134 QFPITFAVAGDLGQTGW------------T----KSTLDHIGQC-KYDVHLLPGDLSYADYMQHR---WDTFGELVQPLA 193 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~------------~----~~~~~~i~~~-~~d~vi~~GDl~~~~~~~~~---~~~~~~~~~~l~ 193 (378)
...++|+..+|+|..-. . ...++++.+. +..++|.+||+......... .+...+.+..+
T Consensus 24 ~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m- 102 (517)
T COG0737 24 TVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNAL- 102 (517)
T ss_pred ceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhc-
Confidence 56799999999975432 1 1234444433 45679999999976443221 11222233322
Q ss_pred hCCceeecCCCCccCCCCcccchhhhchhcccCCC---C---C---CCCCCCceEEEEeCCE--EEEEEcCc--CCC---
Q 017051 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---E---SGSNSNLYYSFDVAGA--HLIMLGSY--ADY--- 257 (378)
Q Consensus 194 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~---~~~~~~~~ysf~~g~v--~fi~ldt~--~~~--- 257 (378)
-.=..+.||||+..... .+..+.+....|. | . ....-..|.-++.+++ -+|++.+. ..+
T Consensus 103 --~yDa~tiGNHEFd~g~~---~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~~~~ 177 (517)
T COG0737 103 --GYDAMTLGNHEFDYGLE---ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTWEKP 177 (517)
T ss_pred --CCcEEeecccccccCHH---HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccccccc
Confidence 23356999999964321 2333333322331 0 1 0111256778888874 45665541 111
Q ss_pred C-----CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceee
Q 017051 258 D-----EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 258 ~-----~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 332 (378)
. .-....+++++.+.+.+.++...+|+++|.+............. .... .. .++|+++.||.|.+--..
T Consensus 178 ~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~~-~~~~----~~-~~iD~i~~GH~H~~~~~~ 251 (517)
T COG0737 178 NAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVPG-DVDV----AV-PGIDLIIGGHSHTVFPGG 251 (517)
T ss_pred cccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccccc-cccc----cc-cCcceEeccCCcccccCC
Confidence 1 11355677777777765534678999999987644321111000 0000 00 449999999999642111
Q ss_pred cccCCCcCCCccEEEEeCCCCCCCCcccc
Q 017051 333 RVNNGKPDPCGAVYITIGDGGNKEGLARK 361 (378)
Q Consensus 333 ~~~~~~~~~~g~~yiv~G~gG~~~~~~~~ 361 (378)
. . ....+++..+-+|..|...|....
T Consensus 252 ~-~--~~~~~~t~ivqag~~gk~vG~~di 277 (517)
T COG0737 252 D-K--PGTVNGTPIVQAGEYGKYVGVLDI 277 (517)
T ss_pred c-c--cCccCCEEEEccChhhCceeEEEE
Confidence 1 0 011246666777777776554443
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.4e-05 Score=74.82 Aligned_cols=186 Identities=20% Similarity=0.227 Sum_probs=88.9
Q ss_pred CCCeEEEEEcccCCCCC--------h---HHHHHHhhc-----CCCcEEEeccccccccchhhhH---HHHHHhhHhhhh
Q 017051 134 QFPITFAVAGDLGQTGW--------T---KSTLDHIGQ-----CKYDVHLLPGDLSYADYMQHRW---DTFGELVQPLAS 194 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------~---~~~~~~i~~-----~~~d~vi~~GDl~~~~~~~~~~---~~~~~~~~~l~~ 194 (378)
...++|+.++|+|..-. . ...++++.+ ...-+++.+||+...... ..+ ....+.+..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~-s~~~~g~~~i~~mN~~-- 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE-SDLQDAEPDFRGMNLI-- 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh-hhhcCCchhHHHHhcC--
Confidence 34689999999986421 1 123444432 233578999999864321 111 1111222222
Q ss_pred CCceeecCCCCccCCCCcccchhhhchhcccCCC---C----CCC-CCCCceEEEEeCCEE--EEEEcCcCC--C-CC--
Q 017051 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAGAH--LIMLGSYAD--Y-DE-- 259 (378)
Q Consensus 195 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~~~~~ysf~~g~v~--fi~ldt~~~--~-~~-- 259 (378)
-.=+.++||||++.... .+..+......|. | ..+ ..-..|.-++.++++ ||++-+... + ..
T Consensus 109 -g~Da~tlGNHEFD~G~~---~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~ 184 (551)
T PRK09558 109 -GYDAMAVGNHEFDNPLS---VLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEY 184 (551)
T ss_pred -CCCEEcccccccCcCHH---HHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccCCCC
Confidence 22245779999964422 2222222111121 0 001 112346667888855 455533110 0 00
Q ss_pred -----cHHHHHHHHHHhhhccC-CCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCcccc
Q 017051 260 -----YSDQYRWLKDDLSKVDR-KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328 (378)
Q Consensus 260 -----~~~Q~~WL~~~L~~~~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 328 (378)
-.+..+-+++.+++.+. .+...+|+++|.......... ........+.+-+...+||++|.||.|..
T Consensus 185 ~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~--~~~~~d~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 185 FTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG--SNAPGDVEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred cCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC--CCCccHHHHHHhCCccCceEEEeCCCCcc
Confidence 01222334444433331 367789999998875322110 00001122222222337999999999975
|
|
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00016 Score=72.92 Aligned_cols=157 Identities=13% Similarity=0.134 Sum_probs=75.8
Q ss_pred HHHHhhcCCC-cEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCC---C
Q 017051 154 TLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E 229 (378)
Q Consensus 154 ~~~~i~~~~~-d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~ 229 (378)
.++++.+..+ -+++.+||+...... ..+..-...++.+..---=+.++||||++.... .+..+.+....|. |
T Consensus 40 ~i~~~r~~~~n~l~ldaGD~~~gs~~-~~~~~g~~~i~~~N~~g~Da~~lGNHEFd~G~~---~l~~~~~~~~fp~l~aN 115 (550)
T TIGR01530 40 EINKLRAESKNALVLHAGDAIIGTLY-FTLFGGRADAALMNAAGFDFFTLGNHEFDAGNE---GLKEFLEPLEIPVLSAN 115 (550)
T ss_pred HHHHHHhhCCCeEEEECCCCCCCccc-hhhcCCHHHHHHHhccCCCEEEeccccccCCHH---HHHHHHHhCCCCEEEEe
Confidence 3455544444 578899999864332 111100011222211123356899999964322 2222222222221 0
Q ss_pred ----CCCC---CCCceEEEEeCC--EEEEEEcCcCC-C---CCc-----HHHHHHHHHHhhhccCCCCCeEEEEeccccc
Q 017051 230 ----ESGS---NSNLYYSFDVAG--AHLIMLGSYAD-Y---DEY-----SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (378)
Q Consensus 230 ----~~~~---~~~~~ysf~~g~--v~fi~ldt~~~-~---~~~-----~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (378)
.... .-..|.-++.++ +-||++.+... . ... .+..+=+++..++.+.++...+|+++|....
T Consensus 116 v~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 116 VIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFE 195 (550)
T ss_pred eecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcH
Confidence 0000 113466677887 56677754210 0 000 1222223333333322356779999998632
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccc
Q 017051 292 NSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (378)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~ 329 (378)
. + . .+.++. +||++|+||+|..-
T Consensus 196 ~---------d---~---~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 K---------N---C---EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred H---------H---H---HHHhcCCCCCEEEeCCCCccc
Confidence 1 0 1 233332 79999999999853
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.2e-05 Score=68.41 Aligned_cols=52 Identities=17% Similarity=0.229 Sum_probs=34.0
Q ss_pred HHhhcCCCcEEEeccccccccchh--hhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 156 DHIGQCKYDVHLLPGDLSYADYMQ--HRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 156 ~~i~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
+.+.+.+||.||++||+++..... ..+.... ........+|++.++||||..
T Consensus 35 ~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 35 RLIEEYGPERLIILGDLKHSFGGLSRQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHhcCCCEEEEeCcccccccccCHHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 334578999999999999754321 1222211 223334458999999999983
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0003 Score=67.46 Aligned_cols=76 Identities=12% Similarity=0.242 Sum_probs=54.6
Q ss_pred CCCeEEEEEcccCCCCC------hHHHHHHhh-----cCCCcEEEeccccccccch-------------hhhHHHHHHhh
Q 017051 134 QFPITFAVAGDLGQTGW------TKSTLDHIG-----QCKYDVHLLPGDLSYADYM-------------QHRWDTFGELV 189 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~------~~~~~~~i~-----~~~~d~vi~~GDl~~~~~~-------------~~~~~~~~~~~ 189 (378)
...+++++++|.|.+.. ....++.+. ..+...++++||+++.-+- .++++.+.+.+
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 46789999999998643 123444443 3456899999999974221 34566677777
Q ss_pred HhhhhCCceeecCCCCccCC
Q 017051 190 QPLASARPWMVTQGNHEKES 209 (378)
Q Consensus 190 ~~l~~~~P~~~v~GNHD~~~ 209 (378)
..+...+-++..|||||...
T Consensus 303 ~~vp~~I~v~i~PGnhDa~r 322 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAVR 322 (481)
T ss_pred hhCCCCceEEEecCCCCccc
Confidence 77777788999999999953
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0011 Score=69.17 Aligned_cols=218 Identities=18% Similarity=0.097 Sum_probs=102.9
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHhhcCCC-cEEEeccccccccchhhhHHH---HH----Hhh
Q 017051 135 FPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDT---FG----ELV 189 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~-d~vi~~GDl~~~~~~~~~~~~---~~----~~~ 189 (378)
-.++|+..+|+|..-. ....++++.+..+ -++|.+||++........... .. ..+
T Consensus 114 ~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~ 193 (814)
T PRK11907 114 VDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPM 193 (814)
T ss_pred eEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHH
Confidence 4699999999985410 0123455544444 478999999975432111000 00 011
Q ss_pred HhhhhCCc-eeecCCCCccCCCCcccchhhhchhcccCCC---C----CCCC-CCCceEEEEe-----CC------EEEE
Q 017051 190 QPLASARP-WMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESGS-NSNLYYSFDV-----AG------AHLI 249 (378)
Q Consensus 190 ~~l~~~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~~-~~~~~ysf~~-----g~------v~fi 249 (378)
-.++..+. =..++||||+++... .+..+.+....|. | ..+. .-..|--++. ++ +-||
T Consensus 194 i~amN~LGyDA~tLGNHEFDyG~d---~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~d~~G~~~~vKIGiI 270 (814)
T PRK11907 194 YAALEALGFDAGTLGNHEFNYGLD---YLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFTDTEGKKVTLNIGIT 270 (814)
T ss_pred HHHHhccCCCEEEechhhcccCHH---HHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEecCCCcccceEEEEE
Confidence 11222222 246899999965432 2222222212221 0 0000 0123333443 33 5566
Q ss_pred EEcCcC--CCC--------CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcE
Q 017051 250 MLGSYA--DYD--------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDL 319 (378)
Q Consensus 250 ~ldt~~--~~~--------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdl 319 (378)
++-+.. .++ .-.+-.+.+++...+.+.++++.+|++.|............++ .-..+-+--+||+
T Consensus 271 Glvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En-----~~~~LA~v~GIDa 345 (814)
T PRK11907 271 GIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN-----VGYQIASLSGVDA 345 (814)
T ss_pred EeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc-----hhhHHhcCCCCCE
Confidence 664311 111 0123344455555544444678899999988643211111111 1122222348999
Q ss_pred EEecCccccceeec------ccCCC----cCCCccEEEEeCCCCCCCCccc
Q 017051 320 VLAGHVHAYERSIR------VNNGK----PDPCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 320 vl~GH~H~y~r~~~------~~~~~----~~~~g~~yiv~G~gG~~~~~~~ 360 (378)
+|.||.|..-.... -+.+. ...+|+..+..|.-|...|..+
T Consensus 346 IvgGHsH~~~p~~~~~~~~~~~p~vd~~~g~ingvpvVqaG~~G~~LG~Id 396 (814)
T PRK11907 346 VVTGHSHAEFPSGNGTSFYAKYSGVDDINGKINGTPVTMAGKYGDHLGIID 396 (814)
T ss_pred EEECCCCCcccCccccccccccCcccccCCcCCCEEEEecChhhceEEEEE
Confidence 99999998431110 00000 0113566677777776655443
|
|
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.9e-05 Score=68.58 Aligned_cols=69 Identities=14% Similarity=0.170 Sum_probs=43.8
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcC--CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~--~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
++++++||+|... ...++++.+... ..|.++++||+++.+.... +.+...++.+....++++++||||.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~--~v~~~l~~~~~~~~~~~~l~GNHE~ 72 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSK--DVVNYIFDLMSNDDNVVTLLGNHDD 72 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChH--HHHHHHHHHhhcCCCeEEEECCcHH
Confidence 3789999999542 124455555432 3599999999998654321 2222222222233689999999998
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.7e-05 Score=67.55 Aligned_cols=69 Identities=19% Similarity=0.251 Sum_probs=47.7
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHh----hcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCce
Q 017051 137 ITFAVAGDLGQTGWT--------------KSTLDHI----GQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPW 198 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i----~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~ 198 (378)
-+.++++|+|.+... .++++++ .+.+||.||++||+.........++.+.+.++.+. .++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~--~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF--RDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC--CcE
Confidence 467899999876421 1344443 46789999999999965443244555555555443 699
Q ss_pred eecCCCCcc
Q 017051 199 MVTQGNHEK 207 (378)
Q Consensus 199 ~~v~GNHD~ 207 (378)
+.++||||.
T Consensus 93 ~~V~GNHD~ 101 (225)
T TIGR00024 93 ILIRGNHDA 101 (225)
T ss_pred EEECCCCCC
Confidence 999999997
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00046 Score=75.77 Aligned_cols=87 Identities=15% Similarity=0.155 Sum_probs=46.9
Q ss_pred HHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCC-------
Q 017051 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGK------- 338 (378)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~------- 338 (378)
+++.+++.+++++..+|+++|.......... + ..+...++.++. +||++|.||.|...... -+.+.
T Consensus 223 ~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~-~----~en~~~~la~~~~gID~Il~GHsH~~~~~~-~~~~~~~~~~~~ 296 (1163)
T PRK09419 223 ANKTIPEMKKGGADVIVALAHSGIESEYQSS-G----AEDSVYDLAEKTKGIDAIVAGHQHGLFPGA-DYKGVPQFDNAK 296 (1163)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCcCCCCCCC-C----cchHHHHHHHhCCCCcEEEeCCCcccccCc-cccccccccccc
Confidence 3444444433467889999999865432211 1 112333445443 79999999999864311 01000
Q ss_pred cCCCccEEEEeCCCCCCCCcc
Q 017051 339 PDPCGAVYITIGDGGNKEGLA 359 (378)
Q Consensus 339 ~~~~g~~yiv~G~gG~~~~~~ 359 (378)
...+|+..+.+|.-|...|..
T Consensus 297 ~~i~g~~ivqag~~g~~lg~i 317 (1163)
T PRK09419 297 GTINGIPVVMPKSWGKYLGKI 317 (1163)
T ss_pred ceECCEEEEccChhhcEEEEE
Confidence 011356666677666654433
|
|
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0014 Score=68.25 Aligned_cols=79 Identities=24% Similarity=0.235 Sum_probs=43.3
Q ss_pred HHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccE
Q 017051 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAV 345 (378)
Q Consensus 267 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~ 345 (378)
+++.+.+.+.++++.+|+++|......... .. +...-.. +++. +||++|+||+|..-... .+|+.
T Consensus 233 a~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~---~~--~ena~~~-l~~v~gID~IlgGHsH~~~~~~--------ingv~ 298 (780)
T PRK09418 233 AKKMVPKMKAEGADVIVALAHSGVDKSGYN---VG--MENASYY-LTEVPGVDAVLMGHSHTEVKDV--------FNGVP 298 (780)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCccccccc---cc--chhhhHH-HhcCCCCCEEEECCCCCccccc--------CCCEE
Confidence 333333333236778999999886432111 00 0011111 3443 79999999999854321 13566
Q ss_pred EEEeCCCCCCCCcc
Q 017051 346 YITIGDGGNKEGLA 359 (378)
Q Consensus 346 yiv~G~gG~~~~~~ 359 (378)
.+.+|.-|...|..
T Consensus 299 vvqaG~~G~~LG~I 312 (780)
T PRK09418 299 VVMPGVFGSNLGII 312 (780)
T ss_pred EEEcChhhcEEEEE
Confidence 66666666654433
|
|
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0012 Score=58.56 Aligned_cols=178 Identities=17% Similarity=0.196 Sum_probs=87.9
Q ss_pred EEEcccCCCCChH----HHHHHhh-cCCCcEEEeccccccccch--hhhHHHHHHhhHhhhhCCceeecCCCCccCCCCc
Q 017051 140 AVAGDLGQTGWTK----STLDHIG-QCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (378)
Q Consensus 140 ~~~gD~~~~~~~~----~~~~~i~-~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 212 (378)
+++||+ .+.... ..+..+. +.++||||..|..+-.+.. ....++++. ..+-+ .+.|||=+...
T Consensus 1 LfiGDI-vG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~~~~L~~------~GvDv-iT~GNH~wdkk-- 70 (253)
T PF13277_consen 1 LFIGDI-VGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGITPKIAEELFK------AGVDV-ITMGNHIWDKK-- 70 (253)
T ss_dssp EEE-EB-BCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS--HHHHHHHHH------HT-SE-EE--TTTTSST--
T ss_pred CeEEec-CCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCCHHHHHHHHh------cCCCE-EecCcccccCc--
Confidence 467887 222222 3333443 6789999999999854332 222222221 12444 48999998532
Q ss_pred ccchhhhchh---cccCCCCCC-CCCCCceEEEEeCCEEEEEEcCc--CCCCCcHHHHHHHHHHhhhccCCCCCeEEEEe
Q 017051 213 IMDAFQSYNA---RWKMPFEES-GSNSNLYYSFDVAGAHLIMLGSY--ADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLL 286 (378)
Q Consensus 213 ~~~~~~~~~~---~~~~p~~~~-~~~~~~~ysf~~g~v~fi~ldt~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 286 (378)
....|.+ +.-.|.|-+ +..+..|..++.++..+.+++-. ........-+..+++.|++.+. +.+.+||=+
T Consensus 71 ---ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l~~-~~~~iiVDF 146 (253)
T PF13277_consen 71 ---EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEELKE-ETDIIIVDF 146 (253)
T ss_dssp ---THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEE
T ss_pred ---HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhccc-cCCEEEEEe
Confidence 1222222 222344422 34467899999998777777652 2222223445556666666432 667889988
Q ss_pred ccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 287 HVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 287 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
|.=..+ . +.-.-.+-.-+|.+|+.-|+|.-.-...+. |+|+-||+
T Consensus 147 HAEaTS-----------E-K~A~g~~lDGrvsaV~GTHTHVqTaDerIL-----p~GTaYiT 191 (253)
T PF13277_consen 147 HAEATS-----------E-KQAMGWYLDGRVSAVVGTHTHVQTADERIL-----PGGTAYIT 191 (253)
T ss_dssp E-S-HH-----------H-HHHHHHHHBTTBSEEEEESSSS-BS--EE------TTS-EEES
T ss_pred ecCcHH-----------H-HHHHHHHhCCcEEEEEeCCCCccCchhhcc-----CCCCEEEe
Confidence 873221 1 333345667789999999999854443333 57899875
|
|
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0001 Score=67.30 Aligned_cols=66 Identities=21% Similarity=0.173 Sum_probs=44.1
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
++++++||+|.... ..++++++. +.+.|.++++||+++.+... ....+.+..+ ..++++|.||||.
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s---~~vl~~l~~l--~~~~~~VlGNHD~ 68 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDS---LEVLRFVKSL--GDSAVTVLGNHDL 68 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCH---HHHHHHHHhc--CCCeEEEecChhH
Confidence 36899999986532 344556554 35789999999999865432 1222333333 2468899999998
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0022 Score=57.80 Aligned_cols=131 Identities=15% Similarity=0.210 Sum_probs=74.8
Q ss_pred EEEEcccCCCCCh------HHHHHHhh-----------cCCCcEEEeccccccccch-------------------hhhH
Q 017051 139 FAVAGDLGQTGWT------KSTLDHIG-----------QCKYDVHLLPGDLSYADYM-------------------QHRW 182 (378)
Q Consensus 139 f~~~gD~~~~~~~------~~~~~~i~-----------~~~~d~vi~~GDl~~~~~~-------------------~~~~ 182 (378)
++++||++.+... +..++.+. ..+...+|++||.+...+. ....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 6788998876542 12223332 2344579999999975332 1223
Q ss_pred HHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCC---CCCCCCCceEEEEeCCEEEEEEcCcC----
Q 017051 183 DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE---ESGSNSNLYYSFDVAGAHLIMLGSYA---- 255 (378)
Q Consensus 183 ~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~ysf~~g~v~fi~ldt~~---- 255 (378)
+.+..++..+.+.+|+..+|||||-......+..+.. ..| |.. ..-..-..-|.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~--~lf--p~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di 157 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHR--CLF--PKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDI 157 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCH--HHh--hcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHH
Confidence 4455677778888999999999998543221122211 111 110 00011133456899999999987742
Q ss_pred -CCCCcHHHHHHHHHHhhh
Q 017051 256 -DYDEYSDQYRWLKDDLSK 273 (378)
Q Consensus 256 -~~~~~~~Q~~WL~~~L~~ 273 (378)
.|.....-++.|+..|+.
T Consensus 158 ~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 158 LKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHhCCCCCHHHHHHHHHHh
Confidence 122234456777777665
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00012 Score=65.52 Aligned_cols=67 Identities=21% Similarity=0.231 Sum_probs=44.1
Q ss_pred EEEEEcccCCCC-ChHHHHHHhhc----------CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCc
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIGQ----------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHE 206 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~----------~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 206 (378)
+++++||+|... ...++++.+.. .+.|.++++||+++.+.. ..+..+.+..+...-.++++.||||
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~---s~evl~~l~~l~~~~~~~~v~GNHE 78 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD---SPEVLRLVMSMVAAGAALCVPGNHD 78 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC---HHHHHHHHHHHhhCCcEEEEECCcH
Confidence 689999998653 23455666521 136899999999986543 2222334444433346889999999
Q ss_pred c
Q 017051 207 K 207 (378)
Q Consensus 207 ~ 207 (378)
.
T Consensus 79 ~ 79 (234)
T cd07423 79 N 79 (234)
T ss_pred H
Confidence 8
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0037 Score=54.78 Aligned_cols=187 Identities=18% Similarity=0.229 Sum_probs=104.7
Q ss_pred eEEEEEcccCCCCChHHH----HHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCC
Q 017051 137 ITFAVAGDLGQTGWTKST----LDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~~~----~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 211 (378)
+|++++||+ .+.....+ +..++ +.++||+|..|-.+-.+. .-.|+.+...++. .+-+ .+.|||=+....
T Consensus 1 mriLfiGDv-vGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~-Git~k~y~~l~~~---G~dv-iT~GNH~wd~~e 74 (266)
T COG1692 1 MRILFIGDV-VGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF-GITEKIYKELLEA---GADV-ITLGNHTWDQKE 74 (266)
T ss_pred CeEEEEecc-cCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc-CCCHHHHHHHHHh---CCCE-EecccccccchH
Confidence 589999998 33222333 33343 678999999999985433 2344444444332 2333 489999985321
Q ss_pred cccchhhhchhcccCCCCCC-CCCCCceEEEEeCCEEEEEEcCc--CCCC-CcHHHHHHHHHHhhhccCCCCCeEEEEec
Q 017051 212 LIMDAFQSYNARWKMPFEES-GSNSNLYYSFDVAGAHLIMLGSY--ADYD-EYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287 (378)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~~~-~~~~~~~ysf~~g~v~fi~ldt~--~~~~-~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H 287 (378)
. ..+..-..++-.|.+-+ +..+..|+-|...+..+.+++-. .... ....-+.-+++.+.+.+. +++.+||-+|
T Consensus 75 i--~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~~-~~~~iiVDFH 151 (266)
T COG1692 75 I--LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIKL-GTDLIIVDFH 151 (266)
T ss_pred H--HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCcc-CCceEEEEcc
Confidence 1 01111112223344322 23456777788877666555542 2111 123445566777777654 5567899998
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEe
Q 017051 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITI 349 (378)
Q Consensus 288 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~ 349 (378)
.-..+.. .-.-++-+..|.+|+.=|+|.-....++. ++|+-|++-
T Consensus 152 AEtTSEK------------~a~g~yldGrvsavvGTHTHV~TaD~rIL-----~~GTayiTD 196 (266)
T COG1692 152 AETTSEK------------NAFGWYLDGRVSAVVGTHTHVPTADERIL-----PKGTAYITD 196 (266)
T ss_pred ccchhhh------------hhhheEEcCeEEEEEeccCccccccceec-----CCCcEEEec
Confidence 7533211 11112334468899999999865554443 578888753
|
|
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0028 Score=65.11 Aligned_cols=89 Identities=17% Similarity=0.156 Sum_probs=46.3
Q ss_pred HHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh-cCCcEEEecCccccceeecccC---C---
Q 017051 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYERSIRVNN---G--- 337 (378)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~r~~~~~~---~--- 337 (378)
+-+++...+.+.++++.+|++.|............+ +.... +.+ -+||++|.||.|..--.. .+. +
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~ae-----n~~~~-l~~v~gID~Il~GHsH~~~p~~-~~~~~~~~d~ 277 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAMAE-----NSVYY-LSEVPGIDAIMFGHSHAVFPGK-DFADIPGADI 277 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcccccc-----chhHH-HhcCCCCCEEEeCCCCccCcCc-ccccCCcccc
Confidence 334444444433467889999998864321101111 11112 333 379999999999753111 010 0
Q ss_pred -CcCCCccEEEEeCCCCCCCCccc
Q 017051 338 -KPDPCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 338 -~~~~~g~~yiv~G~gG~~~~~~~ 360 (378)
+...+|+..+..|.-|...|...
T Consensus 278 ~~g~i~g~pvv~aG~~G~~lG~Id 301 (649)
T PRK09420 278 AKGTLNGVPAVMPGRWGDHLGVVD 301 (649)
T ss_pred ccccCCCEEEEeCChhhcEEEEEE
Confidence 01124666677777776555443
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0008 Score=61.80 Aligned_cols=173 Identities=20% Similarity=0.211 Sum_probs=93.6
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhc---CCCcEEEeccccccccch--------hhhHHH---HHHhh-HhhhhCCceee
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQ---CKYDVHLLPGDLSYADYM--------QHRWDT---FGELV-QPLASARPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~---~~~d~vi~~GDl~~~~~~--------~~~~~~---~~~~~-~~l~~~~P~~~ 200 (378)
+|++|-|++|..-. .-+.+..+.+ .+.|++|++||+---... ...+.. |.+.. ....+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47899999975421 1233444443 489999999999421111 112222 22221 22344588999
Q ss_pred cCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceE-----EEEeCCEEEEEEcCc---CCCCCc--------HHHH
Q 017051 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYY-----SFDVAGAHLIMLGSY---ADYDEY--------SDQY 264 (378)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----sf~~g~v~fi~ldt~---~~~~~~--------~~Q~ 264 (378)
+=||||..+ |.. .+|..+- ...+.|| ...+|++|+-+|... .+|..+ ....
T Consensus 81 IGGNHEAsn----------yL~--eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~sti 147 (456)
T KOG2863|consen 81 IGGNHEASN----------YLQ--ELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNSTI 147 (456)
T ss_pred ecCchHHHH----------HHH--hcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccchhh
Confidence 999999832 221 2233100 0123444 257889999998762 222110 0000
Q ss_pred -------HHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCch-----------------HHHHHHHHHHHhcCCcEE
Q 017051 265 -------RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD-----------------GMMAIMEPLLYAASVDLV 320 (378)
Q Consensus 265 -------~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~-----------------~~~~~l~~l~~~~~vdlv 320 (378)
+.=...|... +.|.-|.++|.=+-+. .++|+.. -....++++|++-++..+
T Consensus 148 RsiYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI--~~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~LkP~yW 222 (456)
T KOG2863|consen 148 RSIYHVRISDVAKLKQL---KHPIDIFLSHDWPRGI--YYYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLKPQYW 222 (456)
T ss_pred hhhhhhhhhhhHHHHhh---cCcceEEeecCCCcch--hhcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhCcchh
Confidence 0001123333 3455688888643221 1222211 123577889999999999
Q ss_pred EecCccc
Q 017051 321 LAGHVHA 327 (378)
Q Consensus 321 l~GH~H~ 327 (378)
|+.|.|.
T Consensus 223 fsAHLH~ 229 (456)
T KOG2863|consen 223 FSAHLHV 229 (456)
T ss_pred hhhhHhh
Confidence 9999996
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0042 Score=50.51 Aligned_cols=66 Identities=21% Similarity=0.178 Sum_probs=40.0
Q ss_pred EEEEEcccCCCCCh--------------HHHHHHhh-cCCC-cEEEeccccccccchhhhHHHHHHhhHhhhhCCceeec
Q 017051 138 TFAVAGDLGQTGWT--------------KSTLDHIG-QCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (378)
Q Consensus 138 ~f~~~gD~~~~~~~--------------~~~~~~i~-~~~~-d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v 201 (378)
.+-++||+|.+... ..++.... -.+| |.+.++||++..... -.....+++.|...+ ..|
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~---~~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANR---ERAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccch---hhHHHHHHHHcCCcE--EEe
Confidence 35678999866321 12344433 2344 788899999864432 123344555555443 789
Q ss_pred CCCCccC
Q 017051 202 QGNHEKE 208 (378)
Q Consensus 202 ~GNHD~~ 208 (378)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999984
|
|
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00027 Score=63.80 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=43.2
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhc---------CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCc
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQ---------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHE 206 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~---------~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD 206 (378)
.|+.++||+|.... ..++++++.- ..-|.++++||+++.+.... + ..+.+..+...-.++++.||||
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~--~-vl~~~~~~~~~~~~~~l~GNHE 77 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSL--R-MIEIVWELVEKKAAYYVPGNHC 77 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChH--H-HHHHHHHHhhCCCEEEEeCccH
Confidence 36899999986532 3445555431 23479999999998665321 1 2223333333457899999999
Q ss_pred c
Q 017051 207 K 207 (378)
Q Consensus 207 ~ 207 (378)
.
T Consensus 78 ~ 78 (245)
T PRK13625 78 N 78 (245)
T ss_pred H
Confidence 6
|
|
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0034 Score=64.31 Aligned_cols=77 Identities=22% Similarity=0.141 Sum_probs=40.7
Q ss_pred CCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCC-------cCCCccEEEE
Q 017051 277 KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGK-------PDPCGAVYIT 348 (378)
Q Consensus 277 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~-------~~~~g~~yiv 348 (378)
+++..+|+++|............+ +. ...+++. +||++++||+|..--.. .+.+. ...+|+..+.
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~~e-----n~-~~~l~~v~gID~Il~GHsH~~~~~~-~~~~~~~~d~~~~~i~g~~vvq 266 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPGAE-----NS-AYYLTKVPGIDAVLFGHSHAVFPGK-DFATIPGADITNGTINGVPAVM 266 (626)
T ss_pred cCCCEEEEEeccCcCCCccccccc-----hH-HHHHhcCCCCCEEEcCCCCccCcCc-ccccCCcccccccccCCEEEEe
Confidence 357789999998865321111111 11 1123443 89999999999743211 01000 0123566666
Q ss_pred eCCCCCCCCccc
Q 017051 349 IGDGGNKEGLAR 360 (378)
Q Consensus 349 ~G~gG~~~~~~~ 360 (378)
.|.-|...|...
T Consensus 267 aG~~G~~lG~id 278 (626)
T TIGR01390 267 AGYWGNHLGVVD 278 (626)
T ss_pred CChhhcEEEEEE
Confidence 776666554433
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00034 Score=63.77 Aligned_cols=67 Identities=12% Similarity=0.114 Sum_probs=41.9
Q ss_pred EEEEEcccCCCCC-hHHHHHHhhc------CCCcEEEeccccccccchhhhHHHHHHhhHhhhhC---CceeecCCCCcc
Q 017051 138 TFAVAGDLGQTGW-TKSTLDHIGQ------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA---RPWMVTQGNHEK 207 (378)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~------~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~---~P~~~v~GNHD~ 207 (378)
++.++||+|.... .+.+++.+.. ...+.+|++||+++.+..... ..+.+..+... ..++++.||||.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~e---Vld~L~~l~~~~~~~~vv~LrGNHE~ 79 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRK---VIDFLISLPEKHPKQRHVFLCGNHDF 79 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHH---HHHHHHHhhhcccccceEEEecCChH
Confidence 6899999986532 3455555532 235789999999987654222 22222223222 247889999996
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00032 Score=62.27 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=42.3
Q ss_pred EEEEcccCCCCC-hHHHHHHhhc--------CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 139 FAVAGDLGQTGW-TKSTLDHIGQ--------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 139 f~~~gD~~~~~~-~~~~~~~i~~--------~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
+.++||+|.... ..++++++.. ...|.+|++||+++.+.... ...+.+..+...-.++.+.||||.
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~---~vl~~l~~l~~~~~~~~l~GNHE~ 75 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIR---ELLEIVKSMVDAGHALAVMGNHEF 75 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHH---HHHHHHHHhhcCCCEEEEEccCcH
Confidence 368999986532 3455666532 14689999999998765421 222333333333468889999998
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0027 Score=46.52 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=47.2
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
+|..+++...+.+++.|+|...... ..-.|+|....+.. ..... ..+.....++|++|+|+|.|.+
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~----~~~~~~~~~~i~~L~p~t~Y~~ 71 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS------DWQEV----TVPGNETSYTITGLQPGTTYEF 71 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSS------EEEEE----EEETTSSEEEEESCCTTSEEEE
T ss_pred cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccce------eeeee----eeeeeeeeeeeccCCCCCEEEE
Confidence 6889999988999999999998411 23466776554332 00111 1112233778899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 72 ~v~a 75 (85)
T PF00041_consen 72 RVRA 75 (85)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00045 Score=61.34 Aligned_cols=66 Identities=23% Similarity=0.169 Sum_probs=42.1
Q ss_pred EEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh-CCceeecCCCCccC
Q 017051 140 AVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS-ARPWMVTQGNHEKE 208 (378)
Q Consensus 140 ~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~P~~~v~GNHD~~ 208 (378)
.++||+|.... ..++++.+....+|.+|++||+++.+... ......+..+.. ..+++.+.||||..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~---~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDS---VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCc---HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 37899985421 23455555556789999999999865432 122222222221 34899999999984
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0008 Score=60.86 Aligned_cols=64 Identities=22% Similarity=0.144 Sum_probs=42.7
Q ss_pred EEEcccCCCC-ChHHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 140 AVAGDLGQTG-WTKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 140 ~~~gD~~~~~-~~~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
.++||+|... ..+++++++. ..+.|.++++||+++.+... .+..+.+..+. ..+..++||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s---~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDS---LETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCH---HHHHHHHHhcC--CCeEEEcCCchHH
Confidence 5899998653 2345666665 34689999999999866532 12233333332 3678999999983
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.02 Score=51.41 Aligned_cols=128 Identities=15% Similarity=0.072 Sum_probs=67.3
Q ss_pred CceeecCCCCccCCCCcccchhhhchh---cccCCCCCCCCC---CCceEEEEeCC--EEEEEEcCcCCCC---------
Q 017051 196 RPWMVTQGNHEKESIPLIMDAFQSYNA---RWKMPFEESGSN---SNLYYSFDVAG--AHLIMLGSYADYD--------- 258 (378)
Q Consensus 196 ~P~~~v~GNHD~~~~~~~~~~~~~~~~---~~~~p~~~~~~~---~~~~ysf~~g~--v~fi~ldt~~~~~--------- 258 (378)
+-++.+-+||+++.... ++....+ .-.++..+.+.. ...+..++.++ +.|+++.+...-.
T Consensus 78 ~d~~tlaNNH~fD~G~~---gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~ 154 (239)
T cd07381 78 FDVVSLANNHTLDYGEE---GLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGIPLAAGARPG 154 (239)
T ss_pred CCEEEcccccccccchH---HHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCCcCcccCCcc
Confidence 55555556999964432 2222211 112332211111 13455567777 4555554421100
Q ss_pred -CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceee
Q 017051 259 -EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 259 -~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 332 (378)
......+-+++.+++.++ +.+.+|+..|-..-... ........+...+.+.++|+|+.||.|..+-..
T Consensus 155 ~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E 223 (239)
T cd07381 155 GVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHVLQGIE 223 (239)
T ss_pred ccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeE
Confidence 011123446666666554 47889999996542211 111234566666667899999999999876443
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.00063 Score=60.56 Aligned_cols=166 Identities=20% Similarity=0.256 Sum_probs=95.7
Q ss_pred CcEEEeccccccccchh-------hhHHHHH-H---hhHhhhhCCceeecCCCCccCCC--Ccc----cchhhhchhcc-
Q 017051 163 YDVHLLPGDLSYADYMQ-------HRWDTFG-E---LVQPLASARPWMVTQGNHEKESI--PLI----MDAFQSYNARW- 224 (378)
Q Consensus 163 ~d~vi~~GDl~~~~~~~-------~~~~~~~-~---~~~~l~~~~P~~~v~GNHD~~~~--~~~----~~~~~~~~~~~- 224 (378)
|=-++..||++++++.+ .++..|. + ...+..-.+|+|.-.||||..-. +.. ......|...+
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 34577788999876541 1111111 1 11122234899999999999522 110 11112222211
Q ss_pred -----cCCCCCCC--CCCCceEEEEeCCEEEEEEcCcCCCCC--cHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC
Q 017051 225 -----KMPFEESG--SNSNLYYSFDVAGAHLIMLGSYADYDE--YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (378)
Q Consensus 225 -----~~p~~~~~--~~~~~~ysf~~g~v~fi~ldt~~~~~~--~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (378)
..|..... ......||+++|+++.+-+-+...-.. ....+-||+.+|........+ ++++.|..+.....
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceec
Confidence 12211111 223568899999999887765322111 134568999999876554555 89999986532211
Q ss_pred C-C---------CCC------chHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 296 A-H---------QGE------GDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 296 ~-~---------~~~------~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
. + .+. ....+..+...++-|+|...+.||.|...
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccc
Confidence 1 0 011 12467899999999999999999999753
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0013 Score=59.78 Aligned_cols=65 Identities=22% Similarity=0.177 Sum_probs=43.2
Q ss_pred EEEEEcccCCCC-ChHHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
+..++||+|... ...++++++. +.+.|-++++||+++.+.... ...+.+..+. ..+..|.||||.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~VlGNHD~ 68 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRLVLGNHDL 68 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEEEEChhHH
Confidence 468999998653 3456777776 456799999999998665421 1222333332 235689999997
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.033 Score=50.04 Aligned_cols=62 Identities=19% Similarity=0.201 Sum_probs=39.3
Q ss_pred HHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceee
Q 017051 265 RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 265 ~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 332 (378)
+-+++.+++++. +.+++|++.|-..-.... . ......+..-+.+.++|+|+.||.|..+...
T Consensus 160 ~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~----p-~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 160 EKILADIARARK-KADVVIVSLHWGVEYQYE----P-TDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred HHHHHHHHHHhc-cCCEEEEEecCccccCCC----C-CHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 334555555544 578899999976532111 1 1133455555656799999999999876543
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.004 Score=54.87 Aligned_cols=72 Identities=19% Similarity=0.159 Sum_probs=48.3
Q ss_pred CeEEEEEcccCCCCCh--------------H---HHHH-HhhcCCCcEEEeccccccccch--hhhHHHHHHhhHhhhhC
Q 017051 136 PITFAVAGDLGQTGWT--------------K---STLD-HIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASA 195 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~~--------------~---~~~~-~i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~~ 195 (378)
.-+.++++|+|.+... . ..++ -+...+|+-+|++||+-.+-+. ..+|+....+++.+...
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 3568999999876321 1 2233 2357899999999999765443 34555555555544433
Q ss_pred CceeecCCCCccC
Q 017051 196 RPWMVTQGNHEKE 208 (378)
Q Consensus 196 ~P~~~v~GNHD~~ 208 (378)
-++.+.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999984
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.11 Score=47.01 Aligned_cols=64 Identities=19% Similarity=0.214 Sum_probs=45.6
Q ss_pred HHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceee
Q 017051 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332 (378)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 332 (378)
+.+.++++++++++ +.+++||..|-..-... ........+...+.+.|+|+|+.+|.|..+-..
T Consensus 169 ~~~~i~~~i~~~r~-~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREARK-KADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHhc-CCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 45888888888873 78899999997532111 112244666666777899999999999977554
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.035 Score=56.67 Aligned_cols=95 Identities=18% Similarity=0.258 Sum_probs=62.9
Q ss_pred CCCcccCCCCCCCCCCceEEEEecCCCeEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEE
Q 017051 28 RRTLEFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (378)
Q Consensus 28 ~~~~~~~~~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 103 (378)
..++.++.+++.......+++.-.+.++++++|.-.+.+... .|+|.++..+ ..+|.. ......+
T Consensus 431 ~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~--------e~~~~~---~~t~~~~ 499 (996)
T KOG0196|consen 431 FASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED--------ERSYST---LKTKTTT 499 (996)
T ss_pred ceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc--------ccceeE---Eecccce
Confidence 344556666666666666777767799999999988765433 4555544321 111211 1223557
Q ss_pred EEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 017051 104 TVIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 104 ~~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|+|+||+|||.|-+||.. -|....|.|.+.
T Consensus 500 ~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 500 ATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred EEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 889999999999999964 267788988764
|
|
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.0095 Score=54.51 Aligned_cols=69 Identities=19% Similarity=0.147 Sum_probs=42.8
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhh--hCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 208 (378)
-+++++||+|... ...++++.+.....+-++++||+++.+.... +.+ ..+..+. ..--++.+.||||..
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~--e~l-~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSI--EVI-LLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChH--HHH-HHHHHHHhcCCCCEEEEeccccHH
Confidence 3589999998542 2334455544556788999999998665321 221 1222221 123578899999984
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.018 Score=55.90 Aligned_cols=45 Identities=24% Similarity=0.118 Sum_probs=33.7
Q ss_pred CCCeEEEEEcccCCCCC-------------hHHHHHHhhcCCCcEEEeccccccccch
Q 017051 134 QFPITFAVAGDLGQTGW-------------TKSTLDHIGQCKYDVHLLPGDLSYADYM 178 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~ 178 (378)
.+.+||++.+|.|.+.. +..++.-+...+.|+|+..||+...+..
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkP 68 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKP 68 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCc
Confidence 46799999999987632 1234444458899999999999876554
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.011 Score=55.07 Aligned_cols=68 Identities=19% Similarity=0.191 Sum_probs=41.3
Q ss_pred EEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhC--CceeecCCCCccC
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 208 (378)
+++++||+|..- ...++++.......+-++++||+++.+... -+.+ ..+..+.-. .-++.++||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVDRG~~s--~Evi-~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVDRGYFS--IECV-LYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccCCCCCh--HHHH-HHHHHHHhhcCCCEEEEeCCCcHH
Confidence 589999998542 223344443344568899999999866531 1222 222222222 3578899999984
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.016 Score=53.38 Aligned_cols=68 Identities=24% Similarity=0.225 Sum_probs=40.9
Q ss_pred EEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CCceeecCCCCccC
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 208 (378)
.+.++||+|..- ....+++.......+-+|++||+++.+.... +.+ ..+..+.- .-.++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~s~--evl-~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYYSV--ETF-LLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcCHH--HHH-HHHHHHhhcCCCcEEEEecccchH
Confidence 488999998542 2233444443445578999999998665322 221 12222221 23588999999984
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.028 Score=52.47 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=39.4
Q ss_pred EEEEEcccCCCCC-hHHHHHHhhcC-CCcEEEeccccccccchhhhHHHHHHhhHhhh--hCCceeecCCCCccC
Q 017051 138 TFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~~~~i~~~-~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 208 (378)
++.++||+|..-. ...+++..... ..+.+|++||+++.+... .+.+ ..+-.+. ..--++.+.||||..
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s--~Evl-~ll~~lk~~~p~~v~llRGNHE~~ 123 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGKRS--IEIL-IILFAFFLVYPNEVHLNRGNHEDH 123 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCCCc--HHHH-HHHHHHhhcCCCcEEEecCchhhh
Confidence 6899999985521 12233332222 236799999999876532 2222 1122221 123488899999985
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.022 Score=52.64 Aligned_cols=68 Identities=18% Similarity=0.155 Sum_probs=41.2
Q ss_pred EEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CCceeecCCCCccC
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 208 (378)
.++++||+|..- ...++++.......+-+|++||+++.+.... +.+. .+..+.- .-.++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--e~i~-ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ETIC-LLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCcH--HHHH-HHHHhhhhCCCcEEEEecccchh
Confidence 489999998542 2233444444455678999999998665322 2211 1112211 12478899999994
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.027 Score=52.22 Aligned_cols=68 Identities=21% Similarity=0.228 Sum_probs=40.4
Q ss_pred EEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhC--CceeecCCCCccC
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~--~P~~~v~GNHD~~ 208 (378)
.+.++||+|..- ...++++.+.....+-++++||+++.+.... +.+ ..+..+.-. .-++.+.||||..
T Consensus 44 ~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s~--evl-~ll~~lk~~~p~~v~llrGNHE~~ 114 (303)
T PTZ00239 44 PVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVDRGYNSV--ETM-EYLLCLKVKYPGNITLLRGNHESR 114 (303)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcCCCCCHH--HHH-HHHHHhhhcCCCcEEEEecccchH
Confidence 378899998542 2233444433345578999999998765321 221 112122212 2478999999974
|
|
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.021 Score=52.77 Aligned_cols=68 Identities=19% Similarity=0.172 Sum_probs=40.5
Q ss_pred EEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhh-HhhhhCCceeecCCCCccC
Q 017051 139 FAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELV-QPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 139 f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~-~~l~~~~P~~~v~GNHD~~ 208 (378)
+.++||+|..- ...++++.+.....+-++++||+++.+... .+.+.... -++.....++.+.||||..
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s--~evl~ll~~lk~~~p~~v~llrGNHE~~ 123 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVDRGKHS--VETITLQFCYKIVYPENFFLLRGNHECA 123 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEecCCCCH--HHHHHHHHHHhhccCCeEEEEecccchH
Confidence 78899998542 223445554444456788999999876532 22221111 1122234688999999974
|
|
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.054 Score=43.74 Aligned_cols=60 Identities=18% Similarity=0.331 Sum_probs=43.7
Q ss_pred HHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCC-CCCCCccccccccccCceecc
Q 017051 306 AIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDG-GNKEGLARKYVLTYRNIFELS 373 (378)
Q Consensus 306 ~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~g-G~~~~~~~~~~~p~~~~~e~~ 373 (378)
+.+.-+-++.+||+.++||+|..+... .+|-.||..|++ |+.......-..|+|.+..+.
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaTGAfn~~~t~~~~PSFvLmDiq 157 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSATGAFNVSDTDIIVPSFVLMDIQ 157 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCcccCCCcccccCCCCCceEEEEec
Confidence 566666778899999999999987765 268899999975 555443333356777776664
|
|
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.12 Score=51.24 Aligned_cols=56 Identities=18% Similarity=0.322 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHH-HHHHHHHhc-CCcE-EEecCcccc
Q 017051 261 SDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMA-IMEPLLYAA-SVDL-VLAGHVHAY 328 (378)
Q Consensus 261 ~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~-~l~~l~~~~-~vdl-vl~GH~H~y 328 (378)
-.|.+|-.+.++.. +.+-++++.|.|.-... .+. .+..+...+ ++++ ||-||.|..
T Consensus 211 i~~~~~~~~m~~~~---~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNTT---DIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhcc---CccEEEEecccccccch---------hhhhHHHHHhhhCCCCceEEECchhhhh
Confidence 46678888887773 55668999999854221 122 344444444 5677 999999974
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.039 Score=52.55 Aligned_cols=69 Identities=20% Similarity=0.204 Sum_probs=39.9
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhcCCC-cEEEeccccccccchhhhHHHHHHhhHhhhh--CCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~-d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 208 (378)
-++.++||+|.... ...+++.+..... +.+|++||+++.+... .+.+ ..+..+.- .--++.+.||||..
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~S--lEvl-~lL~~lki~~p~~v~lLRGNHE~~ 138 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAWG--LETF-LLLLSWKVLLPDRVYLLRGNHESK 138 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCCh--HHHH-HHHHHHhhccCCeEEEEeeecccc
Confidence 46899999986532 2233333322223 4599999999866532 2222 22222221 23478899999984
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.73 Score=41.44 Aligned_cols=69 Identities=20% Similarity=0.193 Sum_probs=42.3
Q ss_pred CCCeEEEEEcccCCCCChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCC
Q 017051 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~ 209 (378)
....||+.++|+|..... +. .-..-|+++++||.+.-+.. .+...|.+.+-.+.-. =-+.|.||||...
T Consensus 59 ~~~~r~VcisdtH~~~~~---i~--~~p~gDvlihagdfT~~g~~-~ev~~fn~~~gslph~-yKIVIaGNHELtF 127 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFD---IN--DIPDGDVLIHAGDFTNLGLP-EEVIKFNEWLGSLPHE-YKIVIAGNHELTF 127 (305)
T ss_pred CCceEEEEecCcccccCc---cc--cCCCCceEEeccCCccccCH-HHHHhhhHHhccCcce-eeEEEeeccceee
Confidence 567999999999865322 11 24567999999999864332 2223333333222111 1357899999954
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.033 Score=51.96 Aligned_cols=68 Identities=18% Similarity=0.155 Sum_probs=40.7
Q ss_pred EEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CCceeecCCCCccC
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 208 (378)
.++++||+|..- ...++++.......+-+|++||+++.+... .+.+ ..+..+.- .-.++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVDRG~~s--~evl-~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVDRGKQS--LETI-CLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecCCCCCc--HHHH-HHHHHhcccCCCceEEEecccchh
Confidence 489999998542 223344444344557789999999866431 2222 11222211 13578999999984
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.11 Score=48.53 Aligned_cols=70 Identities=19% Similarity=0.206 Sum_probs=39.1
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhc-CCCcEEEeccccccccchhhhHHHHHHhhH-hhhhCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQ-PLASARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~-~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD~~ 208 (378)
-++.++||+|..- ....+++...- ..-|-++++||+++.+... .+.+.-.+. ++...--++.++||||..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S--~Evl~ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFS--VEVILTLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCCh--HHHHHHHHHhhhccCCceEEEeeccchH
Confidence 4689999998542 12223333221 1235799999999876532 222211111 111123467899999973
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.17 Score=54.09 Aligned_cols=85 Identities=19% Similarity=0.312 Sum_probs=54.5
Q ss_pred CCCCCCCCCceEEEEecCCCeEEEEEEcCCCCCC------cEEEEeccCCCCC---eeEEeeeeEEeeeeeccCeEEEEE
Q 017051 35 WDPKPSSHPQQVHISLAGDSHMRVTWITDDESSP------SVVEYGTSPGGYN---CGAEGESTSYRYLFYRSGKIHHTV 105 (378)
Q Consensus 35 ~~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~~------~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~~ 105 (378)
++..++..|..|.|-...+++++|.|.+...... -.++|++.+.... ..+.+ ..+.| .
T Consensus 611 lsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~-----------n~~~~--l 677 (1381)
T KOG4221|consen 611 LSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKG-----------NTTQY--L 677 (1381)
T ss_pred ccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeeccc-----------chhhh--H
Confidence 3456777788799998899999999998854321 1334443332111 11111 11222 3
Q ss_pred ECCCCCCCEEEEEeCc--------cCceeEEECCC
Q 017051 106 IGPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 106 l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
+++|+|+|.|.+||.. .|++..+.|+-
T Consensus 678 ~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 678 FNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred hhcCCCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 5689999999999863 26788888864
|
|
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.086 Score=46.18 Aligned_cols=113 Identities=12% Similarity=0.134 Sum_probs=53.2
Q ss_pred EEEEcccCCCCCh------HHHHHHhh-cCCCcEEEeccccccccchhh---------hH-HHH----HHhhHhhhhCCc
Q 017051 139 FAVAGDLGQTGWT------KSTLDHIG-QCKYDVHLLPGDLSYADYMQH---------RW-DTF----GELVQPLASARP 197 (378)
Q Consensus 139 f~~~gD~~~~~~~------~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~---------~~-~~~----~~~~~~l~~~~P 197 (378)
|++++|.+..... .+.++.+. ..+|+.+|++|++++...... .. ..+ ...+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788888776332 22333345 778999999999997533210 11 111 223344455689
Q ss_pred eeecCCCCccCCCCcc-cchhhhc-hhcccCCCCCCCCCCCceEEEEeCCEEEEEEcC
Q 017051 198 WMVTQGNHEKESIPLI-MDAFQSY-NARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~-~~~~~~~-~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt 253 (378)
++.+||+||....... +..+... ......- ..-..-..-+.+.++++.|++...
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~--~~~~~~sNP~~~~i~~~~i~~~s~ 136 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKY--SNIHFVSNPCRISINGQEIGVTSG 136 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHCTT--TTEEE--CSEEEEETTEEEEE-SS
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhhhc--CceEEeCCCeEEEEeCCcEEEECC
Confidence 9999999999544111 1111100 0000000 000001234557888999888865
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.53 E-value=0.11 Score=48.50 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcCCcEEEecCc
Q 017051 305 MAIMEPLLYAASVDLVLAGHV 325 (378)
Q Consensus 305 ~~~l~~l~~~~~vdlvl~GH~ 325 (378)
.+++...+++++.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 578899999999999999998
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.78 Score=31.79 Aligned_cols=71 Identities=11% Similarity=0.189 Sum_probs=39.8
Q ss_pred CceEEEEecCCCeEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 43 PQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 43 p~~v~l~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
|..+++....++++.|+|....... .-.++|........ .... .. ......+...+.+|+|++.|.++|.
T Consensus 4 p~~~~~~~~~~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~--~~----~~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 4 PSNLRVTDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWK--EV----NVTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred CCcEEEEEEeCCEEEEEECCCCCCCCCccEEEEEEEEecCC--CccE--EE----EecCCccEEEEeCcCCCCEEEEEEE
Confidence 3346666556669999997542221 23455554332111 0000 00 0111157788999999999999985
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 3
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=92.29 E-value=1.3 Score=31.69 Aligned_cols=70 Identities=17% Similarity=0.301 Sum_probs=39.6
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+.....+++.|.|...... ..-.|+|........ .. .. ........+.+.+|.|++.|.+
T Consensus 3 ~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-------~~--~~-~~~~~~~~~~i~~l~p~~~Y~~ 72 (93)
T cd00063 3 PPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-------KE--VE-VTPGSETSYTLTGLKPGTEYEF 72 (93)
T ss_pred CCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCC-------EE--ee-ccCCcccEEEEccccCCCEEEE
Confidence 4454555555679999999876432 112333433220000 00 00 1112456677899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 73 ~v~a 76 (93)
T cd00063 73 RVRA 76 (93)
T ss_pred EEEE
Confidence 9854
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=89.70 E-value=1.2 Score=47.68 Aligned_cols=75 Identities=15% Similarity=0.167 Sum_probs=52.2
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCC----CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDD----ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
.+..+|..+.+...+++++.|.|.... ....-.|+|....+... ..... ...+..-.++|+||+|+|
T Consensus 818 ~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~-----~~~~~----~i~~~~~~~~ltgL~~~T 888 (1051)
T KOG3513|consen 818 EPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEG-----SLSRV----QIAGNRTSWRLTGLEPNT 888 (1051)
T ss_pred CCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCcc-----cccce----eecCCcceEeeeCCCCCc
Confidence 456688888888778999999995442 22456899988775431 11110 122456667899999999
Q ss_pred EEEEEeCc
Q 017051 114 VYFYRCGR 121 (378)
Q Consensus 114 ~Y~Y~v~~ 121 (378)
.|++.+..
T Consensus 889 ~Y~~~vrA 896 (1051)
T KOG3513|consen 889 KYRFYVRA 896 (1051)
T ss_pred eEEEEEEE
Confidence 99999864
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=85.28 E-value=0.7 Score=31.82 Aligned_cols=13 Identities=38% Similarity=0.603 Sum_probs=8.1
Q ss_pred CccEEEEeCCCCC
Q 017051 342 CGAVYITIGDGGN 354 (378)
Q Consensus 342 ~g~~yiv~G~gG~ 354 (378)
++|+||++|+||+
T Consensus 1 kapVhiv~G~aG~ 13 (62)
T PF14008_consen 1 KAPVHIVVGAAGN 13 (62)
T ss_dssp TS-EEEEE--S-T
T ss_pred CCCEEEEECcCCC
Confidence 4799999999999
|
|
| >PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II) | Back alignment and domain information |
|---|
Probab=84.91 E-value=0.5 Score=25.98 Aligned_cols=17 Identities=12% Similarity=0.081 Sum_probs=10.5
Q ss_pred cchhhHHHHHHHhhcCC
Q 017051 2 ELKFVLTAFVFISATVT 18 (378)
Q Consensus 2 ~~~~~~~~~~~~~~~~~ 18 (378)
+|.++.++.++.+++|+
T Consensus 8 Kkil~~l~a~~~LagCs 24 (25)
T PF08139_consen 8 KKILFPLLALFMLAGCS 24 (25)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 44455555555599986
|
The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection []. |
| >PRK13792 lysozyme inhibitor; Provisional | Back alignment and domain information |
|---|
Probab=82.72 E-value=7.1 Score=31.14 Aligned_cols=18 Identities=11% Similarity=-0.058 Sum_probs=14.3
Q ss_pred CcchhhHHHHHHH--hhcCC
Q 017051 1 MELKFVLTAFVFI--SATVT 18 (378)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~ 18 (378)
||+.|.++|+.+. |++|.
T Consensus 1 mk~~l~~ll~~~~~lLsaCs 20 (127)
T PRK13792 1 MKKALWLLLAAVPVVLVACG 20 (127)
T ss_pred ChhHHHHHHHHHHhheeccc
Confidence 8888888888887 77775
|
|
| >KOG2476 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.08 E-value=3.6 Score=39.76 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=46.1
Q ss_pred CeEEEEEcccCCCCChHHHHHHhh----cC-CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCC
Q 017051 136 PITFAVAGDLGQTGWTKSTLDHIG----QC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNH 205 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~~~~~~~~i~----~~-~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNH 205 (378)
+.+|+++||.. .....++++++ +. ..|++|++|++...+....+|..+.+-...+. +|+|+.-+|-
T Consensus 5 ~~kILv~Gd~~--Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~vP--iptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVE--GRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKVP--IPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCcc--ccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccCc--eeEEEecCCC
Confidence 46999999973 34566666663 33 47999999999976555667776655544443 7888777665
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 378 | ||||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 6e-63 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 6e-63 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 7e-63 | ||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 2e-62 |
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 378 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-114 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-112 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 1e-35 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 3e-31 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 3e-11 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 3e-10 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 6e-10 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-08 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 5e-06 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 2e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 337 bits (866), Expect = e-114
Identities = 144/369 (39%), Positives = 196/369 (53%), Gaps = 33/369 (8%)
Query: 27 PRRTLEFPWD------PKPSSHPQQVHISLAGD--SHMRVTWITD-DESSPSVVEYGTSP 77
++ PWD P + PQQVHI+ + ++W T D++ + V Y +
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 78 GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG--RQGPEFEFKTPPA-- 133
A G +Y+Y Y S IHH I LE+DT Y+YR G +F F TPP
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPG 122
Query: 134 -QFPITFAVAGDLGQTGWTKSTLDHIGQ--CKYDVHLLPGDLSYADYM----QHRWDTFG 186
P F + GD+GQT + +TL H Q K L GDLSY++ +RWDT+G
Sbjct: 123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWG 182
Query: 187 ELVQPLASARPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVA 244
+ + +PW+ T GNHE + P I + F + R+ P E SGS L+Y+ A
Sbjct: 183 RFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRA 242
Query: 245 GAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGM 304
AH+I+L SY+ + +YS QY+W +L KV+R +TPWL+VL+H P YNS EAH EG+ M
Sbjct: 243 SAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAM 302
Query: 305 MAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPD-----------PCGAVYITIGDGG 353
AI EP VD+V +GHVH+YERS RV+N + VYITIGDGG
Sbjct: 303 RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGG 362
Query: 354 NKEGLARKY 362
N EGLA +
Sbjct: 363 NSEGLASEM 371
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 333 bits (855), Expect = e-112
Identities = 142/360 (39%), Positives = 188/360 (52%), Gaps = 28/360 (7%)
Query: 31 LEFPWDPKPSSH--PQQVHISLAGDS--HMRVTWITDDESSPSVVEYGTSPGGYNCGAEG 86
L+ P + PQQVHI+ M ++W+T DE S V Y + G A+G
Sbjct: 5 LDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKG 64
Query: 87 ESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPPA---QFPITFAV 141
+ ++YR+ Y SG IHHT I L+++T Y+Y G + F F TPP P TF +
Sbjct: 65 KMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGL 124
Query: 142 AGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYM----QHRWDTFGELVQPLASA 195
GDLGQ+ + +TL H K L GDLSYAD RWDT+G + +
Sbjct: 125 IGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAY 184
Query: 196 RPWMVTQGNHEKESIPLIMDA--FQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS 253
+PW+ T GNHE E P I + F+ ++ R+ +P+E S S S +YS A AH+I+L S
Sbjct: 185 QPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSS 244
Query: 254 YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLY 313
Y+ Y + QY WLK +L KV R +TPWL+VL+H P YNS H EG+ M E
Sbjct: 245 YSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFV 304
Query: 314 AASVDLVLAGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKEGLARKY 362
VD+V AGHVHAYERS RV+N D VYITIGD GN +
Sbjct: 305 KYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNM 364
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 1e-35
Identities = 49/259 (18%), Positives = 75/259 (28%), Gaps = 44/259 (16%)
Query: 136 PITFAVAGDLGQTGWTKSTLDH-----------IGQCKYDVHLLPGDLSYADYM----QH 180
+ F GD G + D L GD Y +
Sbjct: 6 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 65
Query: 181 RWDTFGELV--QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP-----FEESGS 233
R+ E V P PW V GNH+ A+ + RW P
Sbjct: 66 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 125
Query: 234 NSNLYYSFDVAGAHLIMLGSYADYDEY----------SDQYRWLKDDLSKVDRKKTPWLL 283
SN+ + + + S + Q W+K L+ K ++L
Sbjct: 126 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVL 182
Query: 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343
V H P ++ A G ++ + PLL V L GH H + D G
Sbjct: 183 VAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL-------QDENG 233
Query: 344 AVYITIGDGGNKEGLARKY 362
++ G G + +
Sbjct: 234 LGFVLSGAGNFMDPSKKHL 252
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 3e-31
Identities = 49/269 (18%), Positives = 79/269 (29%), Gaps = 56/269 (20%)
Query: 134 QFPITFAVAGDLG-----QTGWTKSTLDHIGQCKYDVHLLPGDLSY---ADYMQHRWDTF 185
+ + FA GD G Q K I + + PG W
Sbjct: 1 KCQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNL 60
Query: 186 GELV---QPLASARPWMVTQGNHE-------------------KESIPLIMDAFQSYNAR 223
E V + P+ G + + DA + +
Sbjct: 61 YEDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPK 120
Query: 224 WKMP---------FEESGSNSNLYYSFDVAGAHLIML------GSYADYDEYSDQYRWLK 268
W MP F S S + A I + ++ + + LK
Sbjct: 121 WIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLK 180
Query: 269 DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAY 328
LS K +++V+ P Y+S + + + PLL A VDL ++GH +
Sbjct: 181 SQLSVAK-KIADFIIVVGDQPIYSS--GYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNM 237
Query: 329 ERSIRVNNGKPDPCGAVYITIGDGGNKEG 357
E + +IT G G +G
Sbjct: 238 EVI--------EDNDMAHITCGSGSMSQG 258
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 62.1 bits (151), Expect = 3e-11
Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 30/185 (16%)
Query: 154 TLDHIGQCKYDVHLL--PGDLSYADYMQHRWDTFGELVQPLASAR-PWMVTQGNHEKESI 210
+ + + + GD+ R + + Q L S P + GNH+
Sbjct: 31 VVSQLNALRERPDAVVVSGDIV----NCGRPEEYQVARQILGSLNYPLYLIPGNHD--DK 84
Query: 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSY---ADYDEYSD-QYRW 266
L ++ Q + +N+ + D L+ + S +D W
Sbjct: 85 ALFLEYLQPL------CPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISW 138
Query: 267 LKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM-----AIMEPLLYAASVDLVL 321
L+ L + K + +H P A D + ++ + S+ +
Sbjct: 139 LEAQLFEGGDKPA---TIFMHHPPLPLGNAQ---MDPIACENGHRLLALVERFPSLTRIF 192
Query: 322 AGHVH 326
GH H
Sbjct: 193 CGHNH 197
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 3e-10
Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 31/185 (16%)
Query: 154 TLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASAR--PWMVTQGNHEKES 209
L+ + Q + D + GDL+ + LV+P A+ + GNH
Sbjct: 56 LLEQLNQSGLRPDAIVFTGDLA-DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH---- 110
Query: 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEY----SDQYR 265
D +E+ S + L + G +I+L + + + Q
Sbjct: 111 -----DDRAELRKFL---LDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 162
Query: 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM----AIMEPLLYAASVDLVL 321
WL ++L+ T ++ LH P S + A + +L V +L
Sbjct: 163 WLAEELATPAPDGT---ILALHHPPIPSVLDM---AVTVELRDQAALGRVLRGTDVRAIL 216
Query: 322 AGHVH 326
AGH+H
Sbjct: 217 AGHLH 221
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 6e-10
Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 31/202 (15%)
Query: 155 LDHIGQCKYDVHLLPGDLSY-ADYMQHRWDTFGELVQPLASAR-PWMVTQGNHE------ 206
L + K DV ++ GDL+ + H + + + V GNH+
Sbjct: 85 LADVESKKTDVLIISGDLTNNGEKTSHEE--LAKKLTQVEKNGTQVFVVPGNHDINNPWA 142
Query: 207 ----KESIPLIMDAFQSYNARWKMPF-----EESGSNSNLYYSFDVAGAHLIMLGSYADY 257
K+ + ++ F S S Y + + L+ML +
Sbjct: 143 RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYK 202
Query: 258 DEYS------------DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMM 305
W+K+ + + + VL H +++ +G
Sbjct: 203 TNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYN 262
Query: 306 AIMEPLLYAASVDLVLAGHVHA 327
+ L ++D L+GH+H
Sbjct: 263 QQVIDALTEGAMDFSLSGHIHT 284
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 54.6 bits (130), Expect = 2e-08
Identities = 36/250 (14%), Positives = 65/250 (26%), Gaps = 61/250 (24%)
Query: 154 TLDHIGQCKYDVHLLPGDLSYADYMQHRWD--TFGELVQPLASAR-PWMVTQGNHEKESI 210
+ + + + GD+ + ++ L + GNHE +
Sbjct: 43 AVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNF 102
Query: 211 P---LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVA-GAHLIMLGSYADYDEYSD---- 262
L+ S + + Y F A ++L +Y +
Sbjct: 103 SRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESE 162
Query: 263 ------------------------------------------QYRWLKDDLSKVDRKKTP 280
Q +WL L+ D K+
Sbjct: 163 KHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQER 222
Query: 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPD 340
L + H+P + A++ L SV +AGH H R +
Sbjct: 223 VL-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS----- 276
Query: 341 PCGAVYITIG 350
GA +IT+
Sbjct: 277 --GAQHITLE 284
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 Length = 228 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 5e-06
Identities = 30/226 (13%), Positives = 57/226 (25%), Gaps = 13/226 (5%)
Query: 141 VAGDL-GQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWM 199
+ G + + D L G+L + F ++ P
Sbjct: 10 ATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTA 67
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKM-PFEESGSNSNLYYSFDVAGAHLIMLGSYADYD 258
G + + +A +M E+ + Y G + G +++
Sbjct: 68 YVPGPQDAPIWEYLREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHE 127
Query: 259 EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVD 318
+ L + K + L H Y+ QG + L+ +
Sbjct: 128 ALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQG-----SHEVAHLIKTHNPL 182
Query: 319 LVLAGHVH----AYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR 360
LVL S V G + + + G R
Sbjct: 183 LVLVAGKGQKHEMLGASWVVVPGDLSEGEYSLLDLRARKLETGNVR 228
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 Length = 260 | Back alignment and structure |
|---|
Score = 41.7 bits (97), Expect = 2e-04
Identities = 28/229 (12%), Positives = 74/229 (32%), Gaps = 25/229 (10%)
Query: 141 VAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA-RPWM 199
V G++ + + + + + P + + +T + + +
Sbjct: 38 VVGNILKNEALEKEYERAHLARRE----PNRKVIHENEHYIIETLDKFFREIGELGVKTF 93
Query: 200 VTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDE 259
V G ++ + A+++ A + + ++ +I G E
Sbjct: 94 VVPGKNDAPLKIFLRAAYEAETAY------PNIRVLHEGFAGWRGEFEVIGFGGLLTEHE 147
Query: 260 YSDQY-----RWLKDDLSKVDRKKTPWLLVLL-HVPWYNSNEAHQGEGD---GMMAIMEP 310
+ + + RW + + K + P LV + + P E G +
Sbjct: 148 FEEDFVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNT- 206
Query: 311 LLYAASVDLVLAGHVHA----YERSIRVNNGKPDPCGAVYITIGDGGNK 355
++ + + ++ + GHV +I VN G+ + ++ + K
Sbjct: 207 IIKSLNPEVAIVGHVGKGHELVGNTIVVNPGEFEEGRYAFLDLTQHKIK 255
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.0 bits (95), Expect = 6e-04
Identities = 41/365 (11%), Positives = 91/365 (24%), Gaps = 104/365 (28%)
Query: 6 VLTAFVFISAT-VTT-----AEYIRPQPRRTLEFPWDPKPSSHPQQVHISLAGDSHMRVT 59
AF +TT +++ + + + + L +
Sbjct: 258 AWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL-LL-----KYL 311
Query: 60 WITDDESSPSVVEYGTSPGGYN-CGA---EGESTSYRYLFYRSGKIHHTVIGPLEH-DTV 114
+ V+ T+P + +G +T + K+ + L +
Sbjct: 312 DCRPQDLPREVL--TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369
Query: 115 YFYRCGRQGPEFE----FKTPPAQFPITFAVAGDLGQTGWT----------------KST 154
+ + F+ F P I + + W S
Sbjct: 370 EYRKM------FDRLSVF---PPSAHIPTILLSLI----WFDVIKSDVMVVVNKLHKYSL 416
Query: 155 LD-HIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213
++ + + + Y + + L H ++
Sbjct: 417 VEKQPKESTISIPSI-----YLELKVKL-ENEYAL----------------HRS----IV 450
Query: 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQY---RWLKDD 270
YN ++ Y + G HL + + + R+L+
Sbjct: 451 ----DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-- 504
Query: 271 LSKVDRKKTPW------LLVLLHVPWY------NSNEAHQGEGDGM---MAIMEPLLYAA 315
K+ T W L L + +Y N + + + I E L+ +
Sbjct: 505 -QKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSK 563
Query: 316 SVDLV 320
DL+
Sbjct: 564 YTDLL 568
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 99.97 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 99.96 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.92 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.92 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.91 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.87 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.72 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.7 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.6 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.57 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.54 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.52 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.49 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.48 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.45 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.43 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.41 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.41 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.38 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.33 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.3 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.29 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.26 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.24 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 99.21 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 99.04 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.88 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.85 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.81 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.69 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.68 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.66 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.66 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 98.64 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 98.52 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 98.51 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 98.49 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.47 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 98.32 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 98.12 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 98.01 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.76 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.7 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.65 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.6 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 97.58 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.55 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 97.54 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 97.52 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.46 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 97.43 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.4 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 97.38 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.36 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 97.35 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 97.3 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 97.29 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 97.29 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.27 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 97.26 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.26 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 97.25 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 97.24 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 97.19 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 97.15 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 97.13 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 97.13 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 97.12 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 97.11 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 97.09 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 97.09 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.08 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 97.08 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 97.08 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 97.06 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 97.04 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 97.02 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 97.0 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 96.96 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.92 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 96.91 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 96.9 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.9 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.89 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 96.87 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.87 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 96.87 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 96.86 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 96.86 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.85 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 96.83 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 96.81 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 96.8 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 96.8 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 96.79 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 96.79 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.79 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.78 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 96.77 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 96.77 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.75 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.75 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 96.73 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.72 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 96.68 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 96.68 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 96.64 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 96.63 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.59 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 96.58 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 96.58 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.58 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.57 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.57 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 96.49 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.46 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 96.43 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 96.43 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 96.41 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.35 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.35 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 96.32 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 96.31 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 96.31 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 96.23 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.22 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 96.21 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 96.2 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 96.16 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 96.16 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 96.15 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 95.94 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 95.94 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 95.93 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.91 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 95.88 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 95.86 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 95.78 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 95.78 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.74 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 95.71 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.65 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 95.65 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 95.54 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.52 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 95.48 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 95.47 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.39 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.34 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 95.3 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.23 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.17 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 95.16 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 95.11 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 95.1 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 95.0 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 94.91 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 94.88 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 94.86 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.84 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 94.44 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.38 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 94.23 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 94.06 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 94.01 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 93.83 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 93.71 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 93.38 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 93.29 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 93.22 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 93.22 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 92.85 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 92.51 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 92.38 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 92.35 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 91.98 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 91.91 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 91.89 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 91.63 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 91.42 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 91.31 | |
| 2v5y_A | 731 | Receptor-type tyrosine-protein phosphatase MU; mem | 90.67 | |
| 2erj_C | 247 | Cytokine receptor common gamma chain; immune syste | 90.64 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 90.59 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 90.18 | |
| 2b5i_C | 199 | Cytokine receptor common gamma chain; four-helix b | 90.08 | |
| 3flo_A | 460 | DNA polymerase alpha subunit B; protein-protein co | 90.07 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 89.91 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 89.81 | |
| 2gys_A | 419 | Cytokine receptor common beta chain; dimer of inte | 89.22 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 89.13 | |
| 3bpo_C | 314 | Interleukin-13 receptor alpha-1 chain; IL4, IL13, | 89.04 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 88.69 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 88.44 | |
| 3b4n_A | 344 | Endo-pectate lyase; pectin, galacturonic acid, rig | 85.09 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 83.92 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 83.8 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 83.35 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 83.07 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 82.35 | |
| 2nzi_A | 305 | Titin; IG-domain, FNIII-domain, transferase; 2.90A | 81.77 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 80.4 |
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-59 Score=454.52 Aligned_cols=325 Identities=43% Similarity=0.736 Sum_probs=274.3
Q ss_pred CCCCCCceEEEEecC--CCeEEEEEEcC-CCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 38 KPSSHPQQVHISLAG--DSHMRVTWITD-DESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~i~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
.+...|+||||++++ .++|+|+|.|. +.++.+.|+|++.++.+...+.|++++|.+....++++|+|+|+||+|||+
T Consensus 20 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 99 (426)
T 1xzw_A 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (426)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCE
Confidence 456899999999988 59999999999 777889999999887777778877766665445788999999999999999
Q ss_pred EEEEeCc--cCceeEEECCCC---CCCeEEEEEcccCCCCChHHHHHHhhcC--CCcEEEeccccccccch----hhhHH
Q 017051 115 YFYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWD 183 (378)
Q Consensus 115 Y~Y~v~~--~s~~~~F~t~p~---~~~~~f~~~gD~~~~~~~~~~~~~i~~~--~~d~vi~~GDl~~~~~~----~~~~~ 183 (378)
|+|||+. +|++++|+|+|. ..++||+++||+|.......+++++.+. +|||||++||++|.++. ...|+
T Consensus 100 Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~ 179 (426)
T 1xzw_A 100 YYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWD 179 (426)
T ss_dssp EEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred EEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHH
Confidence 9999985 588999999985 5689999999998765456677787755 89999999999997654 46799
Q ss_pred HHHHhhHhhhhCCceeecCCCCccCCCCc--ccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcH
Q 017051 184 TFGELVQPLASARPWMVTQGNHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261 (378)
Q Consensus 184 ~~~~~~~~l~~~~P~~~v~GNHD~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~ 261 (378)
.|.+.++++.+.+|+++++||||+...+. ....+..|.++|.+|.+..+...+.||+|++|+++||+||++..+..+.
T Consensus 180 ~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~ 259 (426)
T 1xzw_A 180 TWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYS 259 (426)
T ss_dssp HHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTS
T ss_pred HHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCH
Confidence 99999999888899999999999965321 1235677888898987655555678999999999999999988777778
Q ss_pred HHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC---
Q 017051 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--- 338 (378)
Q Consensus 262 ~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~--- 338 (378)
+|++||+++|+++++++++|+||++|+|+++....+.++...+++.|.++|++++||++|+||+|.|+|..|+++++
T Consensus 260 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~ 339 (426)
T 1xzw_A 260 PQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339 (426)
T ss_dssp HHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc
Confidence 99999999999987667899999999999987654445556689999999999999999999999999999988765
Q ss_pred --------cCCCccEEEEeCCCCCCCCccccc
Q 017051 339 --------PDPCGAVYITIGDGGNKEGLARKY 362 (378)
Q Consensus 339 --------~~~~g~~yiv~G~gG~~~~~~~~~ 362 (378)
.+++|++||++|+||+.++....+
T Consensus 340 ~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~ 371 (426)
T 1xzw_A 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEM 371 (426)
T ss_dssp TTCCCCCEECTTSCEEEEECCSCCTTCCCCCB
T ss_pred cCCccccccCCCccEEEEeCCCcccccccccc
Confidence 346899999999999987654333
|
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-57 Score=440.08 Aligned_cols=325 Identities=43% Similarity=0.724 Sum_probs=267.9
Q ss_pred CCCCCCceEEEEecC--CCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.+...|+||||++++ +++|+|+|.|.+.++.+.|+|++.++.....+.|++++|.+....++++|+|+|+||+|||+|
T Consensus 14 ~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 93 (424)
T 2qfp_A 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (424)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEE
Confidence 445689999999987 589999999987677889999999877777787876666554457789999999999999999
Q ss_pred EEEeCc--cCceeEEECCCC---CCCeEEEEEcccCCCCChHHHHHHhhcC--CCcEEEeccccccccch----hhhHHH
Q 017051 116 FYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWDT 184 (378)
Q Consensus 116 ~Y~v~~--~s~~~~F~t~p~---~~~~~f~~~gD~~~~~~~~~~~~~i~~~--~~d~vi~~GDl~~~~~~----~~~~~~ 184 (378)
+|||+. +|++++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.
T Consensus 94 ~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~ 173 (424)
T 2qfp_A 94 YYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 173 (424)
T ss_dssp EEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHH
T ss_pred EEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHH
Confidence 999986 478999999985 4689999999999765445567777654 89999999999997643 357888
Q ss_pred HHHhhHhhhhCCceeecCCCCccCCCCcc--cchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHH
Q 017051 185 FGELVQPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD 262 (378)
Q Consensus 185 ~~~~~~~l~~~~P~~~v~GNHD~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~ 262 (378)
|.+.++++.+.+|+++++||||+...+.. ...+..|..+|.+|........+.||+|++|+++||+||+...+....+
T Consensus 174 ~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~ 253 (424)
T 2qfp_A 174 WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTP 253 (424)
T ss_dssp HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSH
T ss_pred HHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHH
Confidence 88889988888999999999999643211 1246778888888876544456789999999999999999877766679
Q ss_pred HHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC----
Q 017051 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK---- 338 (378)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~---- 338 (378)
|++||+++|+++++++.+|+||++|+|+++....+..+...+++.|.++|++++||++|+||+|.|+|..|+++..
T Consensus 254 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~ 333 (424)
T 2qfp_A 254 QYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 333 (424)
T ss_dssp HHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS
T ss_pred HHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceecc
Confidence 9999999999987656789999999999987554444455678999999999999999999999999999876532
Q ss_pred -------cCCCccEEEEeCCCCCCCCccccc
Q 017051 339 -------PDPCGAVYITIGDGGNKEGLARKY 362 (378)
Q Consensus 339 -------~~~~g~~yiv~G~gG~~~~~~~~~ 362 (378)
.++++++||++|+||+.++....+
T Consensus 334 ~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~ 364 (424)
T 2qfp_A 334 NGLCTPVKDQSAPVYITIGDAGNYGVIDSNM 364 (424)
T ss_dssp SCCCSCEECTTSCEEEEECCSCTTSCCCCCB
T ss_pred CCccccccCCCCcEEEEecCCCCccccCccC
Confidence 246799999999999987765444
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=283.97 Aligned_cols=278 Identities=22% Similarity=0.271 Sum_probs=194.3
Q ss_pred EEecC--CCeEEEEEEcCCCC---------CCcEEEEecc--CCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 48 ISLAG--DSHMRVTWITDDES---------SPSVVEYGTS--PGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 48 l~~~~--~~~~~i~W~t~~~~---------~~~~v~y~~~--~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
++.++ ++++ |.|...... .+..|+|... +........|...+. ....++|+|+|+||+|||+
T Consensus 13 vasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL~P~t~ 87 (527)
T 2yeq_A 13 VASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGLEPNKV 87 (527)
T ss_dssp EEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSCCTTCE
T ss_pred ccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCcCCCCE
Confidence 45555 5555 778876321 2345555444 332334455553221 3678999999999999999
Q ss_pred EEEEeCc---cCceeEEECCCC----CCCeEEEEEcccCCCCChHHHHHHhhcCCCcEEEeccccccccchhh-------
Q 017051 115 YFYRCGR---QGPEFEFKTPPA----QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH------- 180 (378)
Q Consensus 115 Y~Y~v~~---~s~~~~F~t~p~----~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~------- 180 (378)
|+||+.. .|++++|+|+|+ ..+++|+++||.+.......+++.|.+.+||||||+||++|+++...
T Consensus 88 Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~ 167 (527)
T 2yeq_A 88 YYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGN 167 (527)
T ss_dssp EEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCC
T ss_pred EEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccc
Confidence 9999975 378999999986 25899999999876433356788888889999999999999865321
Q ss_pred ----------hHHHHH---------HhhHhhhhCCceeecCCCCccCCCCccc--c------hh-----hhchhcc-cCC
Q 017051 181 ----------RWDTFG---------ELVQPLASARPWMVTQGNHEKESIPLIM--D------AF-----QSYNARW-KMP 227 (378)
Q Consensus 181 ----------~~~~~~---------~~~~~l~~~~P~~~v~GNHD~~~~~~~~--~------~~-----~~~~~~~-~~p 227 (378)
.++.|. ..++.+.+.+|+++++||||+.++-... . .| ..+..+| .+|
T Consensus 168 ~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P 247 (527)
T 2yeq_A 168 VRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMP 247 (527)
T ss_dssp CSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred cccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCC
Confidence 122221 2356677789999999999996431110 0 01 1222333 244
Q ss_pred CCC----CCCCCCceEEEEeCC-EEEEEEcCcCCCC----------------------CcHHHHHHHHHHhhhccCCCCC
Q 017051 228 FEE----SGSNSNLYYSFDVAG-AHLIMLGSYADYD----------------------EYSDQYRWLKDDLSKVDRKKTP 280 (378)
Q Consensus 228 ~~~----~~~~~~~~ysf~~g~-v~fi~ldt~~~~~----------------------~~~~Q~~WL~~~L~~~~~~~~~ 280 (378)
... .+.....||+|++|+ ++||+|||..... .+.+|++||++.|++. +++
T Consensus 248 ~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s---~a~ 324 (527)
T 2yeq_A 248 LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---TAH 324 (527)
T ss_dssp CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC---CSS
T ss_pred CCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC---CCC
Confidence 321 112346899999999 9999999954211 3589999999999985 578
Q ss_pred eEEEEeccccccCCCCC----------CCCchHHHHHHHHHHHhcCCc--EEEecCccccceeec
Q 017051 281 WLLVLLHVPWYNSNEAH----------QGEGDGMMAIMEPLLYAASVD--LVLAGHVHAYERSIR 333 (378)
Q Consensus 281 ~~iv~~H~P~~~~~~~~----------~~~~~~~~~~l~~l~~~~~vd--lvl~GH~H~y~r~~~ 333 (378)
|+||++|+|++...... +......++.|+++|.+++|+ ++|+||+|.+++...
T Consensus 325 W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 325 WNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp EEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred eEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 99999999998753211 111235789999999999984 999999999998863
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=248.99 Aligned_cols=218 Identities=20% Similarity=0.245 Sum_probs=152.5
Q ss_pred CCeEEEEEcccCCCCChHHH-----HHHhhcCCCcEEEeccccccccch---hhhHHHHH-HhhHhh--hhCCceeecCC
Q 017051 135 FPITFAVAGDLGQTGWTKST-----LDHIGQCKYDVHLLPGDLSYADYM---QHRWDTFG-ELVQPL--ASARPWMVTQG 203 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~-----~~~i~~~~~d~vi~~GDl~~~~~~---~~~~~~~~-~~~~~l--~~~~P~~~v~G 203 (378)
.++||+++||+|.+...+.. .+.+++.+|||||++||++|.+.. ...|...+ .....+ ...+|+++++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 47999999999976543322 223347899999999999998431 34565433 333332 23599999999
Q ss_pred CCccCCCCcccchhh-------------------hchhcccCCCCCCCCCCCceEEE----Ee---------C----CEE
Q 017051 204 NHEKESIPLIMDAFQ-------------------SYNARWKMPFEESGSNSNLYYSF----DV---------A----GAH 247 (378)
Q Consensus 204 NHD~~~~~~~~~~~~-------------------~~~~~~~~p~~~~~~~~~~~ysf----~~---------g----~v~ 247 (378)
|||+......+..+. ....+|.+|. .||++ .. | .++
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v~ 153 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAAA 153 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEEE
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceEE
Confidence 999965432211121 1345676774 67765 32 3 399
Q ss_pred EEEEcCcCCCC----------CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCC
Q 017051 248 LIMLGSYADYD----------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASV 317 (378)
Q Consensus 248 fi~ldt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~v 317 (378)
||+|||..... ...+|++||+++|++ ++|+||++|+|+|+.... +....+++.|.++|++++|
T Consensus 154 fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~~~~V 226 (342)
T 3tgh_A 154 FIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLKDAEV 226 (342)
T ss_dssp EEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHHHTTC
T ss_pred EEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHHHcCC
Confidence 99999963221 125899999999943 479999999999987642 3334578999999999999
Q ss_pred cEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccc--------cccccccCceecccc
Q 017051 318 DLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR--------KYVLTYRNIFELSNS 375 (378)
Q Consensus 318 dlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~--------~~~~p~~~~~e~~~~ 375 (378)
+++||||+|.|++..+ .|+.||++|+||....... ....++|.+++++.+
T Consensus 227 dlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~~~Gf~~l~v~~~ 284 (342)
T 3tgh_A 227 DLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNN 284 (342)
T ss_dssp CEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCCCSSCCTTEEEEECSSEEEEEEEETT
T ss_pred CEEEECCCcceeEEee--------CCcEEEEeCccccccccCCCCCCcceeecCCCcEEEEEEECC
Confidence 9999999999999875 5799999999887543110 124567788887654
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-29 Score=229.83 Aligned_cols=225 Identities=22% Similarity=0.349 Sum_probs=150.2
Q ss_pred CCCCCCCeEEEEEcccCCCCC-------h---HHHHHH-hhcCCCcEEEeccccccccchhhhH-HHHHHhhHhh-----
Q 017051 130 TPPAQFPITFAVAGDLGQTGW-------T---KSTLDH-IGQCKYDVHLLPGDLSYADYMQHRW-DTFGELVQPL----- 192 (378)
Q Consensus 130 t~p~~~~~~f~~~gD~~~~~~-------~---~~~~~~-i~~~~~d~vi~~GDl~~~~~~~~~~-~~~~~~~~~l----- 192 (378)
|+| .+++||+++||+|.... . .+.+.. +++.+|||||++||++|..+....+ ..+.+.++.+
T Consensus 1 t~~-~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 1 TAP-TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp --C-CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCC-CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 344 46899999999997642 1 122332 3467999999999998864321111 1222233322
Q ss_pred hhCCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEe------CCEEEEEEcCcCC----------
Q 017051 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV------AGAHLIMLGSYAD---------- 256 (378)
Q Consensus 193 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~------g~v~fi~ldt~~~---------- 256 (378)
...+|+++++||||..........+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 80 l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 151 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQ 151 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTC
T ss_pred hcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCcccccc
Confidence 12589999999999953211001122222334344 46888888 4899999998531
Q ss_pred -------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 257 -------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 257 -------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
.....+|++||++.|++.. .+|+|+++|+|++..... +.....++.+.++|++++|+++|+||+|.++
T Consensus 152 ~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~ 226 (313)
T 1ute_A 152 QPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ 226 (313)
T ss_dssp SCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEE
T ss_pred ccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhhh
Confidence 0124799999999999873 379999999999876542 2233467889999999999999999999998
Q ss_pred eeecccCCCcCCCccEEEEeCCCCCCCCccc----------cc------cccccCceecccc
Q 017051 330 RSIRVNNGKPDPCGAVYITIGDGGNKEGLAR----------KY------VLTYRNIFELSNS 375 (378)
Q Consensus 330 r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~----------~~------~~p~~~~~e~~~~ 375 (378)
+..+ .+|+.||++|++|....... .| ..++|.+++++.+
T Consensus 227 ~~~~-------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~~~ 281 (313)
T 1ute_A 227 YLQD-------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEITPK 281 (313)
T ss_dssp EEEC-------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEECSS
T ss_pred hccC-------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEEcC
Confidence 8763 35899999999886432110 11 1258888888754
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=204.25 Aligned_cols=219 Identities=18% Similarity=0.178 Sum_probs=151.7
Q ss_pred CCCeEEEEEcccCCCCC-------------hHHHHHHhhc--CCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CC
Q 017051 134 QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--AR 196 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~ 196 (378)
..++||+++||+|.... .+++++.+.+ .++|+||++||+++.+.. ..++.+.+.++.+.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP-AAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH-HHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHHhhcCC
Confidence 56899999999996421 1345556665 799999999999986543 556666677776633 58
Q ss_pred ceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC----CCcHHHHHHHHHHhh
Q 017051 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLS 272 (378)
Q Consensus 197 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~----~~~~~Q~~WL~~~L~ 272 (378)
|+++++||||.. ..+....... + ......+|++++++++|++||+.... ....+|++||++.|+
T Consensus 102 pv~~v~GNHD~~------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~ 169 (330)
T 3ib7_A 102 ELVWVMGNHDDR------AELRKFLLDE--A----PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELA 169 (330)
T ss_dssp EEEECCCTTSCH------HHHHHHHHCC--C----CCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTT
T ss_pred CEEEeCCCCCCH------HHHHHHhccc--c----cccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHH
Confidence 999999999983 1222111111 1 11246789999999999999986421 235899999999999
Q ss_pred hccCCCCCeEEEEeccccccCCCCCCC-CchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCC
Q 017051 273 KVDRKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (378)
Q Consensus 273 ~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~ 351 (378)
+... ..+|+++|||++........ ......+.+.+++++++++++|+||+|...... .+|+.++++|+
T Consensus 170 ~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs 238 (330)
T 3ib7_A 170 TPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVASA 238 (330)
T ss_dssp SCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECCC
T ss_pred hccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--------ECCEEEEecCc
Confidence 8743 23789999998765322110 011235789999999999999999999987543 14788888887
Q ss_pred CCCCCCc------c-ccccccccCceeccccc
Q 017051 352 GGNKEGL------A-RKYVLTYRNIFELSNSN 376 (378)
Q Consensus 352 gG~~~~~------~-~~~~~p~~~~~e~~~~~ 376 (378)
.+..... . ..-..++|++++++.++
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~ 270 (330)
T 3ib7_A 239 TCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT 270 (330)
T ss_dssp SSCEECTTSCTTCCCEESCSCEEEEEEECSSC
T ss_pred ceeccCCCCCCcceeccCCCCceEEEEEECCC
Confidence 7642111 1 11245679999997654
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=201.54 Aligned_cols=224 Identities=17% Similarity=0.111 Sum_probs=146.2
Q ss_pred CCCeEEEEEcccCCCCC--------------------hHHHHHHhhcCCCcEEEeccccccccchhh--hHHHHHHhhHh
Q 017051 134 QFPITFAVAGDLGQTGW--------------------TKSTLDHIGQCKYDVHLLPGDLSYADYMQH--RWDTFGELVQP 191 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~--~~~~~~~~~~~ 191 (378)
...+||+++||+|.... ..++++.+.+.+||+||++||+++.+.... .++.+....+.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 35799999999997641 123444555689999999999998654211 13443333443
Q ss_pred hhh-CCceeecCCCCccCCCCcccchhhhchhcccCCCCC--------CCCCCCceEEEEe-CCEEEEEEcCcCC-----
Q 017051 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEE--------SGSNSNLYYSFDV-AGAHLIMLGSYAD----- 256 (378)
Q Consensus 192 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~--------~~~~~~~~ysf~~-g~v~fi~ldt~~~----- 256 (378)
+.. .+|+++++||||..... ...+.+.+..+... ....+..||+|+. ++++||+||+...
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~ 157 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFS-----RPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGR 157 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCC-----HHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSS
T ss_pred HHhcCCcEEEecCCCCcccCC-----HHHHhhhhCCcccccccccccccCCCCceEEEEecCCCEEEEEEcCceeccccc
Confidence 332 48999999999993211 11222222211000 0001357899998 8999999998531
Q ss_pred -----------------------------------------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC
Q 017051 257 -----------------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (378)
Q Consensus 257 -----------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (378)
.....+|++||++.|+++.+ +..++||++|+|++....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~~H~p~~~~~~ 236 (322)
T 2nxf_A 158 EEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAA 236 (322)
T ss_dssp CTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSS
T ss_pred CCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEEEccCCCCCCC
Confidence 01237899999999998753 124589999999987553
Q ss_pred CCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 296 AHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
.... .....+.+.++++++ +|+++|+||+|.+.+... ..|+.|++.|+... .....+.|++++++.
T Consensus 237 ~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------~~g~~~i~~~~~~~-----~~~~~~~y~~v~~~~ 303 (322)
T 2nxf_A 237 DPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVIE-----TPPHSHAFATAYLYE 303 (322)
T ss_dssp CGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGGG-----CCTTSCEEEEEEECS
T ss_pred Cccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------cCCceEEEecchhh-----CCCCCCcEEEEEEEC
Confidence 2100 011357899999999 799999999999887651 25788888776521 112457889999875
Q ss_pred cc
Q 017051 375 SN 376 (378)
Q Consensus 375 ~~ 376 (378)
+.
T Consensus 304 ~~ 305 (322)
T 2nxf_A 304 DR 305 (322)
T ss_dssp SE
T ss_pred Ce
Confidence 43
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=190.92 Aligned_cols=216 Identities=13% Similarity=0.136 Sum_probs=141.6
Q ss_pred eEEEEEcccCCCCC-------------hHHHHHHhhc--CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeec
Q 017051 137 ITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~~~~i~~--~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v 201 (378)
+||+++||+|.... ..++++.+.+ .++|+||++||+++.+. ...|+.+.+.++.+ .+|++++
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-~~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-HHHHHHHHHHHHhc--CCCEEEE
Confidence 58999999997631 2344555554 36899999999998554 34455555555554 4899999
Q ss_pred CCCCccCCCCcccchhh-hchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC----CCcHHHHHHHHHHhhhccC
Q 017051 202 QGNHEKESIPLIMDAFQ-SYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDR 276 (378)
Q Consensus 202 ~GNHD~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~----~~~~~Q~~WL~~~L~~~~~ 276 (378)
+||||... .+. .+...| ++.... .+..+|+++.++++|++||+.... ....+|++||++.|++..
T Consensus 78 ~GNHD~~~------~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~- 147 (274)
T 3d03_A 78 PGNHDDKA------LFLEYLQPLC-PQLGSD--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG- 147 (274)
T ss_dssp CCTTSCHH------HHHHHHGGGS-GGGCSC--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHT-
T ss_pred CCCCCCHH------HHHHHhhhhh-cCcccC--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCC-
Confidence 99999831 111 111111 111000 023578999999999999996422 235899999999999862
Q ss_pred CCCCeEEEEeccccccCCCCCCC-CchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEe-CCCC
Q 017051 277 KKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITI-GDGG 353 (378)
Q Consensus 277 ~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~-G~gG 353 (378)
.+++|+++|+|++........ ......+.+.++++++ +++++|+||+|..+.... .|+.++++ |+++
T Consensus 148 --~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~--------~g~~~~~~pg~~~ 217 (274)
T 3d03_A 148 --DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY--------RQALISTLPGTVH 217 (274)
T ss_dssp --TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE--------TTEEEEECCCSSC
T ss_pred --CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheE--------CCEEEEEcCCcce
Confidence 346999999999875432111 0112347888999999 899999999999876431 35444444 4444
Q ss_pred CCCCc------cccccccccCceecccc
Q 017051 354 NKEGL------ARKYVLTYRNIFELSNS 375 (378)
Q Consensus 354 ~~~~~------~~~~~~p~~~~~e~~~~ 375 (378)
..... .....+|+|++++++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~gy~i~~i~~~ 245 (274)
T 3d03_A 218 QVPYCHADTDPYYDLSPASCLMHRQVGE 245 (274)
T ss_dssp BCCCCSSCCSCEEBCCCCEEEEEEEETT
T ss_pred eeccCCCccccccccCCCceEEEEEeCC
Confidence 32211 11234689999999764
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.9e-21 Score=185.33 Aligned_cols=230 Identities=16% Similarity=0.136 Sum_probs=143.2
Q ss_pred CCCeEEEEEcccCCCCC---------------------------hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHH
Q 017051 134 QFPITFAVAGDLGQTGW---------------------------TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG 186 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~---------------------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~ 186 (378)
..++||++++|+|.... ...+++.+.+.+||+||++||+++.+.. ..++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK-TSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH-HHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH-HHHHHHH
Confidence 56799999999997531 1234444557789999999999986543 3456666
Q ss_pred HhhHhhhh-CCceeecCCCCccCCCCccc-----------chhhhchhcccCCCCCC----CCCCCceEEEEeCCEEEEE
Q 017051 187 ELVQPLAS-ARPWMVTQGNHEKESIPLIM-----------DAFQSYNARWKMPFEES----GSNSNLYYSFDVAGAHLIM 250 (378)
Q Consensus 187 ~~~~~l~~-~~P~~~v~GNHD~~~~~~~~-----------~~~~~~~~~~~~p~~~~----~~~~~~~ysf~~g~v~fi~ 250 (378)
+.++.+.. .+|+++++||||........ .....|.+.|....... ......|+.+..++++|++
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66666643 58999999999995321100 01122233232110000 0011234445578999999
Q ss_pred EcCcCC------------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCC-chHHHHHHHHHHHhcCC
Q 017051 251 LGSYAD------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE-GDGMMAIMEPLLYAASV 317 (378)
Q Consensus 251 ldt~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~~v 317 (378)
||+... .....+|++||++.|+++... ...+|+++|+|++.....+... .....+.+.+++++++|
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 999632 123579999999999987542 2458999999998654322111 11246889999999999
Q ss_pred cEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccccc
Q 017051 318 DLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSNSN 376 (378)
Q Consensus 318 dlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~~~ 376 (378)
+++|+||+|....... .. .+..+.+.+.+|+-+. .++.|++++++.++
T Consensus 275 ~lvl~GH~H~~~~~~~-~~--~~g~~~~~i~~gs~~~--------~p~~y~il~i~~~~ 322 (443)
T 2xmo_A 275 DFSLSGHIHTQNIRSA-KS--TDGKEITDIVTNALSV--------FPHKYGNITYSAKN 322 (443)
T ss_dssp CEEEECSSCSCEEEEE-EC--TTSCEEEEEECCCTTS--------TTCEEEEEEEETTT
T ss_pred eEEEECCcccCchhhc-cc--CCCCceEEEEcCcccc--------CCCCeEEEEEeCCC
Confidence 9999999999765431 10 0111233344443221 34788999987654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.3e-17 Score=145.74 Aligned_cols=198 Identities=11% Similarity=-0.032 Sum_probs=115.1
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
++||+++||+|.... .+++++.+.+.++|+||++||+++.+.....+..+.+.++.+ .+|+++++||||....
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~---- 78 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW---- 78 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH----
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH----
Confidence 589999999997632 234444555568999999999997653333333444444332 4799999999998421
Q ss_pred chhhhchhcc----cCCCCCCCCCCCceEEEEeC-CEEEEEEcCcC--CCCCcHH--------HHHHHHHHhhhccCCCC
Q 017051 215 DAFQSYNARW----KMPFEESGSNSNLYYSFDVA-GAHLIMLGSYA--DYDEYSD--------QYRWLKDDLSKVDRKKT 279 (378)
Q Consensus 215 ~~~~~~~~~~----~~p~~~~~~~~~~~ysf~~g-~v~fi~ldt~~--~~~~~~~--------Q~~WL~~~L~~~~~~~~ 279 (378)
..+...+ ..|.... ..+. .+.++ +++|++++... .+....+ +.+|+++.|++...
T Consensus 79 ---~~~~~~~~~~~~~~~~~~--l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 148 (228)
T 1uf3_A 79 ---EYLREAANVELVHPEMRN--VHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD--- 148 (228)
T ss_dssp ---HHHHHHHHHHHHCTTEEE--CBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS---
T ss_pred ---HHHHhhhhhhccCcceEE--cccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCC---
Confidence 1111111 0111000 0011 24556 89999987521 1111112 22344455555422
Q ss_pred CeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCcc
Q 017051 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLA 359 (378)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~ 359 (378)
.+.|+++|+|++....... ....+.+++++++++++++||+| ... .. ..+++++.+|+.+
T Consensus 149 ~~~il~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~GH~H-~~~-~~-------~~~~~~in~Gs~~------ 208 (228)
T 1uf3_A 149 YPKIFLFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKG-QKH-EM-------LGASWVVVPGDLS------ 208 (228)
T ss_dssp CCEEEEESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSS-CEE-EE-------ETTEEEEECCBGG------
T ss_pred CCeEEEEccCcccCCcccc-----CHHHHHHHHHHhCCCEEEEcccc-cCc-cc-------cCCceEEEecccC------
Confidence 2589999999876421111 12567778888999999999999 222 11 1356777777543
Q ss_pred ccccccccCceecc
Q 017051 360 RKYVLTYRNIFELS 373 (378)
Q Consensus 360 ~~~~~p~~~~~e~~ 373 (378)
.++|.+++++
T Consensus 209 ----~~~~~i~~~~ 218 (228)
T 1uf3_A 209 ----EGEYSLLDLR 218 (228)
T ss_dssp ----GTEEEEEETT
T ss_pred ----CCceEEEEec
Confidence 3566777765
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.70 E-value=8.8e-17 Score=145.15 Aligned_cols=210 Identities=10% Similarity=0.099 Sum_probs=118.4
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhh-----------------------HHHHHHhhHh
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHR-----------------------WDTFGELVQP 191 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~-----------------------~~~~~~~~~~ 191 (378)
++||+++||+|.... ..++++.+...++|+||++||+++.+..... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 589999999997643 3456666667799999999999975432110 0223444555
Q ss_pred hhh-CCceeecCCCCccCCCCcccchhhhchhccc-CCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC-CCcHHHH----
Q 017051 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-MPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-DEYSDQY---- 264 (378)
Q Consensus 192 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~-~~~~~Q~---- 264 (378)
+.. .+|+++++||||..... .+........ .|.- . .-.....+.+++++|++++..... ....+++
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~----~~~~~~~~~~~~~~~--~-~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 157 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI----FLRAAYEAETAYPNI--R-VLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYP 157 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH----HHHHHHHTTTTCTTE--E-ECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEE
T ss_pred HHhcCCcEEEEcCCCCchhhh----hHHHHhhhccCCcce--E-EecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcc
Confidence 544 48999999999984210 0001111100 0000 0 001122377889999999753210 0111222
Q ss_pred HHHH----HHhhhccCCCCCeEEEEeccccccCCCCCC--CCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC
Q 017051 265 RWLK----DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK 338 (378)
Q Consensus 265 ~WL~----~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~ 338 (378)
.|+. +.|++.. + ...|+++|+|++....... .........+.+++++++++++++||+| ... ..
T Consensus 158 ~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H-~~~-~~----- 227 (260)
T 2yvt_A 158 RWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG-KGH-EL----- 227 (260)
T ss_dssp HHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC-CEE-EE-----
T ss_pred hhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc-CCc-EE-----
Confidence 2443 3333331 2 3469999999875311110 0001122567788889999999999999 322 11
Q ss_pred cCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 339 PDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 339 ~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
.++++++.+|+.+. ..|.+++++.
T Consensus 228 --~~~~~~in~Gs~~~----------g~~~ii~~~~ 251 (260)
T 2yvt_A 228 --VGNTIVVNPGEFEE----------GRYAFLDLTQ 251 (260)
T ss_dssp --ETTEEEEECCBGGG----------TEEEEEETTT
T ss_pred --eCCEEEEeCCCCCC----------CceEEEEEcC
Confidence 13567777776542 1677777764
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.2e-15 Score=143.28 Aligned_cols=221 Identities=13% Similarity=0.091 Sum_probs=114.2
Q ss_pred CCCeEEEEEcccCCC----CC-------------hHHHHHHhhcCCCcEEEeccc-cccccch-hhhHHHHHHhhHhhhh
Q 017051 134 QFPITFAVAGDLGQT----GW-------------TKSTLDHIGQCKYDVHLLPGD-LSYADYM-QHRWDTFGELVQPLAS 194 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~----~~-------------~~~~~~~i~~~~~d~vi~~GD-l~~~~~~-~~~~~~~~~~~~~l~~ 194 (378)
...+||+.+||+|.+ .. .+.+++.+.+.+||+||++|| +++.... ....+.+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 467999999999966 21 123445556789999999999 7754432 2223445566666654
Q ss_pred CCceeecCCCCccCCCCcccchhhhchhccc----CCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC-------CCcHHH
Q 017051 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWK----MPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-------DEYSDQ 263 (378)
Q Consensus 195 ~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~-------~~~~~Q 263 (378)
.+|+++++||||... . ..+..+..... .-.+. . ......++.+++.|++++..... ....+|
T Consensus 96 ~~pv~~i~GNHD~~~-~---~~~~~~l~~~g~nv~v~~~~-~--~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~ 168 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-L---KLFGNFVTSISSDITFVMSF-E--PVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFF 168 (336)
T ss_dssp HSCEEECCC-------C---HHHHHHHHHHCSSEEECCSS-S--CEEEECTTSCEEEEEEECCC-------CCSSHHHHH
T ss_pred cCCEEEECCCCCccc-c---ccHHHHHHhcCCEEEEEecc-c--ccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHH
Confidence 489999999999853 1 11222221111 00000 0 00011122356888888643221 112467
Q ss_pred HHHHHHHhhhcc-CCCCCeEEEEeccccccCCCCCCCCchHH-HHHHHHHHHhcCCcEEEecCccccceeecccCCCcCC
Q 017051 264 YRWLKDDLSKVD-RKKTPWLLVLLHVPWYNSNEAHQGEGDGM-MAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDP 341 (378)
Q Consensus 264 ~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~-~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~ 341 (378)
++|+.+.|...- . ...+.|+++|.|+....... .+.. . ...+...+.+.++|++++||+|..+....
T Consensus 169 ~~~~~~~l~~~~~~-~~~~~Ill~H~~~~~~~~~~-~~~~-~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~-------- 237 (336)
T 2q8u_A 169 LESRLNKLYEEALK-KEDFAIFMGHFTVEGLAGYA-GIEQ-GREIIINRALIPSVVDYAALGHIHSFREIQK-------- 237 (336)
T ss_dssp HHHHHHHHHHHHHT-CSSEEEEEEESEETTCC----------CCCEECGGGSCTTSSEEEEESCSSCEEEEE--------
T ss_pred HHHHHHHHHHhccC-CCCCEEEEECccccCCCCCC-Cccc-hhhcccCHHHccccCCEEEEccccCceEeCC--------
Confidence 889888876531 1 23479999999987532110 0000 0 00011123446899999999998765431
Q ss_pred CccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 342 CGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 342 ~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
++..+.+|+...... ......+++.+++++.
T Consensus 238 -~~~i~y~GS~~~~s~-~e~~~~~~~~lv~i~~ 268 (336)
T 2q8u_A 238 -QPLTIYPGSLIRIDF-GEEADEKGAVFVELKR 268 (336)
T ss_dssp -TTEEEECCCSSCCSG-GGTTCCCEEEEEEEET
T ss_pred -CccEEECCCCcCCCc-cccCCCCEEEEEEEeC
Confidence 122344554422110 1111246777777754
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.9e-14 Score=134.09 Aligned_cols=215 Identities=14% Similarity=-0.031 Sum_probs=115.2
Q ss_pred CCCeEEEEEcccCCCCC--------------hHHHHHHhhcCCCcEEEeccccccccch-hhhHHHHHHhhHhhhh-CCc
Q 017051 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARP 197 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P 197 (378)
..++||+++||+|.+.. ...+++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 56799999999997742 1234455567899999999999875532 2344556667777754 389
Q ss_pred eeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCC
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRK 277 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~ 277 (378)
+++++||||.............+......-. ...++..+-+++.+++++...... .....+||+..-....
T Consensus 98 v~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~-- 168 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAK-- 168 (386)
T ss_dssp EEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHH--
T ss_pred EEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhcc--
Confidence 9999999998532110000001111000000 011111111468888998654321 1233344432211111
Q ss_pred CCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCC
Q 017051 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357 (378)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~ 357 (378)
...+.|+++|.|+........... + ..+. ++|++++||+|..+.. +. .++..+.+|+......
T Consensus 169 ~~~~~Ill~H~~~~~~~~~~~~~~------~-~~l~--~~d~v~~GH~H~~~~~-~~-------~~~~i~ypGS~~~~~~ 231 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIPLDYELE------H-FDLP--KFSYYALGHIHKRILE-RF-------NDGILAYSGSTEIIYR 231 (386)
T ss_dssp TCSSEEEEECCCCTTTSSSSCSSC------G-GGSC--CCSEEEECSCCSCEEE-EC-------SSSEEEECCCSSCCSG
T ss_pred cCCCEEEEECcCccccCCCCcccC------H-HHhh--hCCeEEccCCCCCccc-cC-------CCceEEECCcccccCc
Confidence 123589999999753211111000 0 0111 3999999999987432 21 3556666776532211
Q ss_pred cc-ccc--cccccCceeccc
Q 017051 358 LA-RKY--VLTYRNIFELSN 374 (378)
Q Consensus 358 ~~-~~~--~~p~~~~~e~~~ 374 (378)
.. ..+ .++++.+++++.
T Consensus 232 ~e~~~~~~~~kg~~lv~i~~ 251 (386)
T 3av0_A 232 NEYEDYKKEGKGFYLVDFSG 251 (386)
T ss_dssp GGTHHHHHHCSEEEEEECCS
T ss_pred chhccccCCCCEEEEEEEec
Confidence 00 001 356778888764
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=7.1e-14 Score=127.15 Aligned_cols=204 Identities=15% Similarity=0.046 Sum_probs=112.6
Q ss_pred CCCeEEEEEcccCCCCChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcc
Q 017051 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 213 (378)
.+.+||+++||+|..... + ...++|+||++||+++.+.. .+.+.+.+.++.+. ..++++|+||||.......
T Consensus 57 ~~~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~g~~-~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTELGLP-SEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSSCCH-HHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCCCCH-HHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 566999999999976432 1 33689999999999986542 33445555555442 2468999999999532211
Q ss_pred cchh--hhchh--cc-cCCCC---CCCC-CCCce----EEEEeCCEEEEEEcCcCCCCC---cHHHHHHHHHHhhhccCC
Q 017051 214 MDAF--QSYNA--RW-KMPFE---ESGS-NSNLY----YSFDVAGAHLIMLGSYADYDE---YSDQYRWLKDDLSKVDRK 277 (378)
Q Consensus 214 ~~~~--~~~~~--~~-~~p~~---~~~~-~~~~~----ysf~~g~v~fi~ldt~~~~~~---~~~Q~~WL~~~L~~~~~~ 277 (378)
.... ..+.. .+ ..+.. .... ..+.. -+..+++++|++..-...+.. ..++.+++.+.+.....
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 0000 00000 00 00000 0000 00111 135678899988654221111 11222344333443322
Q ss_pred CCCeEEEEeccccccCCCCCC-CCchHHHHHHHHHH-HhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCC
Q 017051 278 KTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLL-YAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (378)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~-~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~ 355 (378)
+ ..|+++|.|++....... .........+.+.+ ++++++++++||+|....... .+++++|..|+-|..
T Consensus 208 ~--~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~-------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 208 G--TDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT-------DGYTTYINASTCTVS 278 (296)
T ss_dssp T--CSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------CSSCEEEECBCSCTT
T ss_pred C--CeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE-------ECCEEEEECCcCCcC
Confidence 2 369999999987643210 00111235667766 689999999999997532221 247889999987764
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.5e-14 Score=127.59 Aligned_cols=203 Identities=9% Similarity=-0.002 Sum_probs=111.4
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhh---cC--CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIG---QC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~---~~--~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
++++++||+|.... ..++++.+. .. ++|+||++||+++.+... ....+.+..+....|+++++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~---~~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCH---HHHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 58999999996422 244556665 55 799999999999755321 1223344444333689999999998311
Q ss_pred CcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcC--cCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecc
Q 017051 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt--~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (378)
.+...+. .. ... . .+++.... ... ...-....+|++||++........-....|+++|+
T Consensus 79 --------~~~~~~~-~~-~~~----~--~~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~ 139 (252)
T 1nnw_A 79 --------MSDPHAT-DP-GYI----D--KLELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYG 139 (252)
T ss_dssp --------HSCTTCS-SS-GGG----G--GSSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESS
T ss_pred --------ccccccC-Cc-ccc----c--chhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcC
Confidence 0000000 00 000 0 00000000 000 00001135788898764332211101247888998
Q ss_pred ccccCC-CCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccc
Q 017051 289 PWYNSN-EAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTY 366 (378)
Q Consensus 289 P~~~~~-~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~ 366 (378)
+++... ...... ...+.+..+++++ +++++++||+|...... .+++++|.+|+.|.+.. .-..+.
T Consensus 140 ~p~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~~~in~Gs~~~~~~---~~~~~~ 206 (252)
T 1nnw_A 140 SPINPFDGEVLAE--QPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFPPG---KEHKAT 206 (252)
T ss_dssp CSSCTTTCCCCSS--CCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSCSS---SSCCEE
T ss_pred CCCCCcccccCCC--CCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCeEEEECCCccCCCC---CCCcce
Confidence 874322 111111 1235677888888 99999999999854432 14788899998776431 112457
Q ss_pred cCceeccc
Q 017051 367 RNIFELSN 374 (378)
Q Consensus 367 ~~~~e~~~ 374 (378)
|.+++++.
T Consensus 207 y~il~~~~ 214 (252)
T 1nnw_A 207 FALVDVDT 214 (252)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 77777754
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-13 Score=119.76 Aligned_cols=164 Identities=14% Similarity=0.152 Sum_probs=98.0
Q ss_pred CeEEEEEcccCCCCC---hHHHHHH-hhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCC
Q 017051 136 PITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~---~~~~~~~-i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 211 (378)
.+|++++||+|.... ..+.+.+ +...++|+|+++||+++ ....+.++.+. .|+++|+||||.....
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~--------~~~l~~l~~~~--~~v~~V~GNHD~~~~~ 94 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCS--------QEYVEMLKNIT--KNVYIVSGDLDSAIFN 94 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCC--------HHHHHHHHHHC--SCEEECCCTTCCSCCB
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCC--------HHHHHHHHHcC--CCEEEecCCCcCcccc
Confidence 589999999997532 2233333 34678999999999984 12223333332 6899999999984211
Q ss_pred cccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccc
Q 017051 212 LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (378)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (378)
. . ..+.. .+| .. .... ....+|+++|.+++
T Consensus 95 ~-~---~~~~~--~lp---------~~---------------------------------~~~~--~~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 95 P-D---PESNG--VFP---------EY---------------------------------VVVQ--IGEFKIGLMHGNQV 124 (215)
T ss_dssp C-C---GGGTB--CCC---------SE---------------------------------EEEE--ETTEEEEEECSTTS
T ss_pred c-C---hhhHh--hCC---------ce---------------------------------EEEe--cCCeEEEEEcCCcc
Confidence 0 0 00000 000 00 0000 01247899996554
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCcee
Q 017051 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFE 371 (378)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e 371 (378)
.... ..+.+..++++.++|++++||+|...... .+++.++..|+.+.+.........|.|.+++
T Consensus 125 ~~~~--------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inpGS~~~~~~~~~~~~~~~y~il~ 188 (215)
T 2a22_A 125 LPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFSALTPDAPPSFMLMA 188 (215)
T ss_dssp SSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCCTTSTTCCCEEEEEE
T ss_pred CCCC--------CHHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEECCcccccCCCCCCCCCCcEEEEE
Confidence 3211 12566677778899999999999864322 1478889999876542211223457888888
Q ss_pred cccc
Q 017051 372 LSNS 375 (378)
Q Consensus 372 ~~~~ 375 (378)
++..
T Consensus 189 i~~~ 192 (215)
T 2a22_A 189 LQGN 192 (215)
T ss_dssp EETT
T ss_pred EeCC
Confidence 8643
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-13 Score=114.34 Aligned_cols=155 Identities=18% Similarity=0.211 Sum_probs=97.0
Q ss_pred CeEEEEEcccCCCCC---hHHHHHH-hhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCC
Q 017051 136 PITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~---~~~~~~~-i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 211 (378)
.+||+++||+|.... ..+.+.+ +...++|+|+++||++. .. ..+.++.+. .|+++|+||||...
T Consensus 10 mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~----~~----~~~~l~~~~--~~~~~v~GNhD~~~-- 77 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----KE----SYDYLKTLA--GDVHIVRGDFDENL-- 77 (192)
T ss_dssp -CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----HH----HHHHHHHHC--SEEEECCCTTCCCT--
T ss_pred ceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCC----HH----HHHHHHhcC--CCEEEEcCCcCccc--
Confidence 489999999996531 2233443 34568999999999984 11 222333332 58999999999831
Q ss_pred cccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccc
Q 017051 212 LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (378)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (378)
.+|. ...+.. ..++|+++|.+++
T Consensus 78 -------------~lp~---------~~~~~~-----------------------------------~~~~i~l~Hg~~~ 100 (192)
T 1z2w_A 78 -------------NYPE---------QKVVTV-----------------------------------GQFKIGLIHGHQV 100 (192)
T ss_dssp -------------TSCS---------EEEEEE-----------------------------------TTEEEEEECSCCC
T ss_pred -------------cCCc---------ceEEEE-----------------------------------CCEEEEEECCCcC
Confidence 1121 111110 1257888996554
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCcee
Q 017051 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFE 371 (378)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e 371 (378)
.... ..+.+..++++.+++++++||+|...... .+++.++.+|+.+.+.........|.|.+++
T Consensus 101 ~~~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGS~~~~~~~~~~~~~~~y~il~ 164 (192)
T 1z2w_A 101 IPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYNALETNIIPSFVLMD 164 (192)
T ss_dssp CBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCCSSCSCCCCEEEEEE
T ss_pred CCCC--------CHHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEECCcccccCCCCCcCCCCcEEEEE
Confidence 3211 12456677778899999999999864332 2478899999876543211223467889988
Q ss_pred cccc
Q 017051 372 LSNS 375 (378)
Q Consensus 372 ~~~~ 375 (378)
++..
T Consensus 165 ~~~~ 168 (192)
T 1z2w_A 165 IQAS 168 (192)
T ss_dssp EETT
T ss_pred EECC
Confidence 8643
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=3.3e-13 Score=122.43 Aligned_cols=206 Identities=15% Similarity=0.081 Sum_probs=115.0
Q ss_pred CCCeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCc
Q 017051 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 212 (378)
..+.|++++||+|.+.. ..++++.+...++|.|+++||++..+... ....+.++. ..|+++|+||||....
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~---~~~~~~v~GNhD~~~~-- 80 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQ---LPITARVLGNWEDSLW-- 80 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHT---SCEEEECCCHHHHHHH--
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHc---cCCEEEEcCChHHHHH--
Confidence 46799999999995421 24566666777899999999999754421 222233332 2478999999998311
Q ss_pred ccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecccccc
Q 017051 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (378)
Q Consensus 213 ~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (378)
......+..+.. ...+.. . ...+..-....++++||++.-......-....|+++|..+..
T Consensus 81 -----~~~~~~~~~~~~-----~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~ 141 (270)
T 3qfm_A 81 -----HGVRKELDSTRP-----SQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDK 141 (270)
T ss_dssp -----HHHTTCSCTTSH-----HHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTB
T ss_pred -----HhhccccCCCcH-----HHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCC
Confidence 000000000000 000000 0 000001123478889988754332111112468888976543
Q ss_pred CCC-CCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccc---cccccccC
Q 017051 293 SNE-AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLAR---KYVLTYRN 368 (378)
Q Consensus 293 ~~~-~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~---~~~~p~~~ 368 (378)
... ..... ...+.+..++++.++|++|+||+|....... .+|.++|..|+-|.+..... .-..+.|.
T Consensus 142 ~~~~~~~~~--~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~-------~~~~~~iNpGSvg~pr~~~~~~~~~~~asya 212 (270)
T 3qfm_A 142 NWGRELIHT--GKQEEFDRLVTHPPCDIAVYGHIHQQLLRYG-------TGGQLIVNPGSIGQPFFLDAQLRKDLRAQYM 212 (270)
T ss_dssp SSSSTTSTT--CCHHHHHHTTTTTTCSEEECCSSCSEEEEEC-------TTSCEEEEECCSSSCCCSSTTGGGCCCEEEE
T ss_pred CCCceecCC--CcHHHHHHHhcccCCCEEEECCcCchHheec-------cCCEEEEECCCccCCCCCCccccCCCCCEEE
Confidence 211 11111 1235677778888999999999996433221 25789999999887643211 12356888
Q ss_pred ceecccc
Q 017051 369 IFELSNS 375 (378)
Q Consensus 369 ~~e~~~~ 375 (378)
+++++..
T Consensus 213 ild~~~~ 219 (270)
T 3qfm_A 213 ILEFDDK 219 (270)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 8888653
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.43 E-value=8.3e-13 Score=125.69 Aligned_cols=187 Identities=15% Similarity=0.174 Sum_probs=101.7
Q ss_pred eEEEEEcccCCCCC----h-------------HHHHHHhhcCCCcEEEeccccc-cccch-hhhHHHHHHhhHhhhhCCc
Q 017051 137 ITFAVAGDLGQTGW----T-------------KSTLDHIGQCKYDVHLLPGDLS-YADYM-QHRWDTFGELVQPLASARP 197 (378)
Q Consensus 137 ~~f~~~gD~~~~~~----~-------------~~~~~~i~~~~~d~vi~~GDl~-~~~~~-~~~~~~~~~~~~~l~~~~P 197 (378)
+||++++|+|.+.. . ..+++.+...+||+||++||++ +.... ...++.+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999997653 1 2334444578999999999999 53332 2344555666666654489
Q ss_pred eeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEE--eC-CEEEEEEcCcCCCC----CcHHHHHHHHHH
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD--VA-GAHLIMLGSYADYD----EYSDQYRWLKDD 270 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~--~g-~v~fi~ldt~~~~~----~~~~Q~~WL~~~ 270 (378)
+++++||||.... ..+..+... .+.+.........+.+. .| .+.++++.-..... ...++.+|+.+.
T Consensus 81 v~~i~GNHD~~~~----~~~~~~~~~--~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~~ 154 (379)
T 3tho_B 81 VVVLPGNQDWKGL----KLFGNFVTS--ISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESR 154 (379)
T ss_dssp EEECCCTTSCTTH----HHHHHHHHT--TCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHHH
T ss_pred EEEEcCCCccccC----ccccccccc--cCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHHH
Confidence 9999999997321 011111111 11100000001112232 23 47777775422111 135678899888
Q ss_pred hhh----ccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCcccccee
Q 017051 271 LSK----VDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERS 331 (378)
Q Consensus 271 L~~----~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 331 (378)
|++ ... ...+.|+++|.++.........+. .....+...+...++|++++||.|..+..
T Consensus 155 l~~~~~~~~~-~~~~~I~l~H~~v~g~~~~~~se~-~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 155 LNKLYEEALK-KEDFAIFMGHFTVEGLAGYAGIEQ-GREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHT-CSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHhcC-CCCCeEEEEeccccCCccCCCCcc-ccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 872 211 334689999998754322000000 00011111222468999999999987543
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.41 E-value=6.5e-12 Score=106.45 Aligned_cols=147 Identities=16% Similarity=0.139 Sum_probs=94.4
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
.+|++++||+|.... .+++++.+.. ++|+|+++||+... .++.+. .|+++++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~~------------~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSELR------------PDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCSC------------TTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCchH------------HHHhhh--CCeEEecCcccchh-----
Confidence 489999999994321 2344444444 89999999998421 123333 28999999999831
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCC
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (378)
..|. ...+ .. ...+|+++|.|++...
T Consensus 66 ----------~~p~---------~~~~-------------------------------~~----~~~~i~~~Hg~~~~~~ 91 (176)
T 3ck2_A 66 ----------GYPE---------RLVT-------------------------------EL----GSTKIIQTHGHLFDIN 91 (176)
T ss_dssp ----------TCCS---------EEEE-------------------------------EE----TTEEEEEECSGGGTTT
T ss_pred ----------cCCc---------EEEE-------------------------------EE----CCeEEEEECCCccCCC
Confidence 0121 0000 00 1247899999887532
Q ss_pred CCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
. ..+.+.+++++++++++++||+|...... .+++.++..|+.|.+.. ....+.|.+++++.
T Consensus 92 ~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~~---~~~~~~y~il~~~~ 152 (176)
T 3ck2_A 92 F--------NFQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPRG---TIRECLYARVEIDD 152 (176)
T ss_dssp T--------CSHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCCT---TCCSCCEEEEEECS
T ss_pred C--------CHHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCcCCC---CCCCCeEEEEEEcC
Confidence 1 12456777888999999999999865432 14788899998775421 11237888888864
Q ss_pred c
Q 017051 375 S 375 (378)
Q Consensus 375 ~ 375 (378)
.
T Consensus 153 ~ 153 (176)
T 3ck2_A 153 S 153 (176)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-12 Score=111.50 Aligned_cols=157 Identities=11% Similarity=0.101 Sum_probs=95.7
Q ss_pred CeEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 136 PITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 136 ~~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
.+|++++||+|... ..+++++.+...++|+|+++||+++. ...+.++.+ ..|+++|+||||....
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~V~GNhD~~~~---- 90 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIATYGNNDGERC---- 90 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEEECCTTCCCHH----
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEeCCCcchHH----
Confidence 38999999999432 12345566666899999999999842 122333332 3799999999998421
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCC
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (378)
.+ ...+ .|. + ..+ + +.. ...... ..++|+++|.|++.
T Consensus 91 -~~---~~~~-~~~---~---~~~---------l--~~~-----------------~~~~~~--~~~~ill~Hg~~~~-- 127 (190)
T 1s3l_A 91 -KL---KEWL-KDI---N---EEN---------I--IDD-----------------FISVEI--DDLKFFITHGHHQS-- 127 (190)
T ss_dssp -HH---HHHH-HHH---C---TTC---------E--EES-----------------EEEEEE--TTEEEEEEESCCHH--
T ss_pred -HH---HHHh-ccc---C---hhh---------h--ccc-----------------ceEEee--CCcEEEEECCChHH--
Confidence 11 1111 111 0 000 0 000 000111 13589999998653
Q ss_pred CCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceecc
Q 017051 295 EAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELS 373 (378)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~ 373 (378)
+.+.+.+. ++|++++||+|..+... .+++.+|.+|+.|. .+ ...+.|.+++++
T Consensus 128 -------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~~~-r~----~~~~~y~il~~~ 181 (190)
T 1s3l_A 128 -------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECCG-YL----TGIPTIGILDTE 181 (190)
T ss_dssp -------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSSC-TT----TSCCEEEEEETT
T ss_pred -------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcccc-cC----CCCCEEEEEEcC
Confidence 33455565 99999999999865443 14788899998775 21 135889999987
Q ss_pred cc
Q 017051 374 NS 375 (378)
Q Consensus 374 ~~ 375 (378)
..
T Consensus 182 ~~ 183 (190)
T 1s3l_A 182 KK 183 (190)
T ss_dssp TT
T ss_pred CC
Confidence 54
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=6.7e-13 Score=118.82 Aligned_cols=195 Identities=16% Similarity=0.132 Sum_probs=107.8
Q ss_pred CCeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcc
Q 017051 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 213 (378)
..+|++++||+|.... ..++++.+. ++|.++++||++..+... ....+.+..+ .+++.++||||.......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~---~~~~~~l~~~---~~~~~v~GNhD~~~~~~~ 73 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRP---RECVELVRVL---APNISVIGNHDWACIGRL 73 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCH---HHHHHHHHHH---CSSEECCCHHHHHHTCCC
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCH---HHHHHHHHhc---CCCEEEeCchHHHHhccC
Confidence 4689999999994421 233444444 899999999999755422 2223333333 236899999998321100
Q ss_pred cchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccC
Q 017051 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (378)
Q Consensus 214 ~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (378)
... .+. .. ......| ..-....++++||++....... + .+++.|.++...
T Consensus 74 --~~~----~~~-~~---~~~~~~~----------------~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 74 --SLD----EFN-PV---ARFASYW----------------TTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRHP 123 (246)
T ss_dssp --CCC------C-GG---GGCHHHH----------------HHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSST
T ss_pred --Ccc----ccC-HH---HHHHHHH----------------HHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCCc
Confidence 000 000 00 0000000 0001246788999875443322 2 478889877654
Q ss_pred CCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeec----------cc-CC-Cc-CCCccEEEEeCCCCCCCCccc
Q 017051 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR----------VN-NG-KP-DPCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~----------~~-~~-~~-~~~g~~yiv~G~gG~~~~~~~ 360 (378)
... .... ...+.++|++++++++|+||+|....... .. .+ .. -..|..+|..|+-|.+..
T Consensus 124 ~~~-~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~Prd--- 196 (246)
T 3rqz_A 124 IWE-YIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRD--- 196 (246)
T ss_dssp TTC-CCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCCCS---
T ss_pred ccc-ccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCCCC---
Confidence 311 1111 25677888999999999999997432210 00 00 00 023578899999888742
Q ss_pred cccccccCceeccc
Q 017051 361 KYVLTYRNIFELSN 374 (378)
Q Consensus 361 ~~~~p~~~~~e~~~ 374 (378)
.-+.+.|.+++.+.
T Consensus 197 g~p~A~Y~i~d~~~ 210 (246)
T 3rqz_A 197 GDPRASYAIFEPDA 210 (246)
T ss_dssp SCCSEEEEEEEGGG
T ss_pred cCCcceEEEEECCC
Confidence 22344677777653
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.8e-11 Score=102.64 Aligned_cols=146 Identities=15% Similarity=0.135 Sum_probs=88.9
Q ss_pred CCeEEEEEcccCCC---CChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCC
Q 017051 135 FPITFAVAGDLGQT---GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (378)
Q Consensus 135 ~~~~f~~~gD~~~~---~~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 211 (378)
..+|++++||+|.. ....+.++.+. .++|+|+++||+++. ...+.++.+ ..|+++|+||||...
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~GNhD~~~-- 87 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVHGNMDYPD-- 87 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECCCSSSCGG--
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEECCCCcHH--
Confidence 34899999999942 22345666655 789999999999852 122333333 269999999999831
Q ss_pred cccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccc
Q 017051 212 LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (378)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (378)
|... .|. ...+.++ ..+|+++|...+
T Consensus 88 --------~~~~--lp~---------~~~~~~~-----------------------------------g~~i~l~HG~~~ 113 (178)
T 2kkn_A 88 --------VKEH--LPF---------SKVLLVE-----------------------------------GVTIGMCHGWGA 113 (178)
T ss_dssp --------GGGT--SCS---------CEEEEET-----------------------------------TEEEEECCSCCC
T ss_pred --------HHhh--CCc---------ceEEEEC-----------------------------------CEEEEEECCCCC
Confidence 1111 221 1112111 136788885422
Q ss_pred cCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCcee
Q 017051 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFE 371 (378)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e 371 (378)
. ......+.+.++ .++|++++||+|...... .+++++|..|+.+. +.|.+++
T Consensus 114 ~---------~~~~~~~~~~~~-~~~d~vi~GHtH~~~~~~--------~~~~~~iNpGS~~~----------~sy~il~ 165 (178)
T 2kkn_A 114 P---------WDLKDRLLKVFN-EKPQVILFGHTHEPEDTV--------KAGVRFLNPGSLAE----------GSYAVLE 165 (178)
T ss_dssp H---------HHHHHHHHHHSS-SCCSEEECCSCSSCCEEE--------ETTEEEECCCCTTT----------TEEEEEE
T ss_pred C---------CCHHHHHHHHhc-cCCCEEEECccCCCCeEE--------eCCEEEEECCCCCC----------CeEEEEE
Confidence 1 112233344444 689999999999864332 14788888887654 7788888
Q ss_pred cccc
Q 017051 372 LSNS 375 (378)
Q Consensus 372 ~~~~ 375 (378)
++..
T Consensus 166 ~~~~ 169 (178)
T 2kkn_A 166 LDGG 169 (178)
T ss_dssp EETT
T ss_pred ECCC
Confidence 7643
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.30 E-value=8.7e-12 Score=107.46 Aligned_cols=153 Identities=14% Similarity=0.146 Sum_probs=90.2
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHhhc--CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceee
Q 017051 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i~~--~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~ 200 (378)
++++++||+|.+... +.+++.+.+ .++|+|+++||+++.+. .+....+.++.+. .|++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~~---~~~~~~~~l~~l~--~~~~~ 76 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFN---DKNEYLRIWKALP--GRKIL 76 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSC---CTTSHHHHHHHSS--SEEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCch---hHHHHHHHHHHCC--CCEEE
Confidence 579999999965321 122333443 58999999999997531 2222334444442 58999
Q ss_pred cCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCC
Q 017051 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280 (378)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 280 (378)
|+||||... ..+...| -. +. +..||+ +. ..
T Consensus 77 v~GNhD~~~--------~~~~~~~--------------~~----------l~----------~~~~l~----~~----~~ 106 (195)
T 1xm7_A 77 VMGNHDKDK--------ESLKEYF--------------DE----------IY----------DFYKII----EH----KG 106 (195)
T ss_dssp ECCTTCCCH--------HHHTTTC--------------SE----------EE----------SSEEEE----EE----TT
T ss_pred EeCCCCCch--------hhhhhhh--------------hc----------hh----------HHHHHH----hc----CC
Confidence 999999831 1111111 00 00 111221 11 12
Q ss_pred eEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCC-ccEEEEeCC
Q 017051 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPC-GAVYITIGD 351 (378)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~-g~~yiv~G~ 351 (378)
.+|+++|+|++....... ....+.+.+++++++++++++||+|...... .+| ..+ |..|+.+|+
T Consensus 107 ~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~--~~g--~~~~g~~~~nvg~ 171 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNREGI--KCA--CKDYRIECINANV 171 (195)
T ss_dssp EEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSCC----CC--TTSSSCCEEECBG
T ss_pred cEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCccc--ccc--cccCCcceEEEeE
Confidence 489999999876543222 1245788899999999999999999865432 111 112 555676664
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.29 E-value=6.3e-11 Score=112.81 Aligned_cols=220 Identities=15% Similarity=0.046 Sum_probs=112.6
Q ss_pred CCCeEEEEEcccCCCCC---------h----HHHHHHhhcCCCcEEEeccccccccchh-hhHHHHHHhhHh--------
Q 017051 134 QFPITFAVAGDLGQTGW---------T----KSTLDHIGQCKYDVHLLPGDLSYADYMQ-HRWDTFGELVQP-------- 191 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~---------~----~~~~~~i~~~~~d~vi~~GDl~~~~~~~-~~~~~~~~~~~~-------- 191 (378)
...+||++++|+|.+.. . .++++.+.+.+||+||++||+++..... .....+.+.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~~ 90 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 90 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 57899999999998642 1 3455566688999999999998765442 222223333322
Q ss_pred ----h----------------------hhCCceeecCCCCccCCCCcccchhhhc-----hhcccCCCCCCCCCCC---c
Q 017051 192 ----L----------------------ASARPWMVTQGNHEKESIPLIMDAFQSY-----NARWKMPFEESGSNSN---L 237 (378)
Q Consensus 192 ----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~---~ 237 (378)
| ...+|++++.||||.............+ ...+.... ..++ .
T Consensus 91 ~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~----~~~~i~~~ 166 (417)
T 4fbw_A 91 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----ENDNIVVS 166 (417)
T ss_dssp CCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC-------CEEEC
T ss_pred cceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcc----cCCceeEE
Confidence 1 1259999999999995321100001100 00111000 0000 0
Q ss_pred eEEEEeCC--EEEEEEcCcCCCCCcHHHHHHHHHHhhhc-cC---CCCCeEEEEeccccccCCCCCCCCchHHHHHHHHH
Q 017051 238 YYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSKV-DR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPL 311 (378)
Q Consensus 238 ~ysf~~g~--v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~-~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l 311 (378)
-..+.-|+ +.+.++. |.....-..++.+...+. .. ....+.|++.|..........+-. .-
T Consensus 167 pv~l~~g~~~valyG~~----~~~d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip---------~~ 233 (417)
T 4fbw_A 167 PILLQKGFTKLALYGIS----NVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP---------ES 233 (417)
T ss_dssp CEEEEETTEEEEEEEEC----CCCHHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSCC---------GG
T ss_pred eEEEEecCceEEEEecc----CCchhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccCc---------hh
Confidence 11233443 4455553 222111113333322211 11 234578999998765432111100 11
Q ss_pred HHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 312 LYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 312 ~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
+...++|+|+.||+|..+...... ..+++..+..|+.....-..+...++++.+++++.
T Consensus 234 l~~~~~DyvalGH~H~~~~~~~~~----~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~ 292 (417)
T 4fbw_A 234 FIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIATSLSPGETAPKHCGILNITG 292 (417)
T ss_dssp GSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEET
T ss_pred HhhcCCCEEEecCccccceecccc----CCCCEEEEECCCCCcCCCccccCCCCEEEEEEEEC
Confidence 455689999999999876442100 02356667777654333211223567888888864
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-10 Score=109.06 Aligned_cols=219 Identities=14% Similarity=0.032 Sum_probs=112.4
Q ss_pred CCCeEEEEEcccCCCCCh-------------HHHHHHhhcCCCcEEEeccccccccchh-hhHHHHHHhhHh--------
Q 017051 134 QFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQ-HRWDTFGELVQP-------- 191 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vi~~GDl~~~~~~~-~~~~~~~~~~~~-------- 191 (378)
...+||++++|+|.+... ..+++.+.+.+||+||++||+++..... .....+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 578999999999986421 3455666688999999999999765542 222223333322
Q ss_pred ----h----------------------hhCCceeecCCCCccCCCCcccchhhhchh------cccCCCCCCCCCCC---
Q 017051 192 ----L----------------------ASARPWMVTQGNHEKESIPLIMDAFQSYNA------RWKMPFEESGSNSN--- 236 (378)
Q Consensus 192 ----l----------------------~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~--- 236 (378)
| ...+|++++.||||........ ....+.. .+.... ..++
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~-s~~~LL~~~g~v~l~g~~~----~~d~i~~ 228 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRY-SALDILQVTGLVNYFGRVP----ENDNIVV 228 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CC-CHHHHHHHTTSCEECCCCS----CSSSEEE
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccc-cHHHHhccCCcEEEeCCcc----cCCceeE
Confidence 1 1259999999999995321110 0111111 111000 0000
Q ss_pred ceEEEEeCC--EEEEEEcCcCCCCCcHHHHHHHHHHhhhc-cC---CCCCeEEEEeccccccCCCCCCCCchHHHHHHHH
Q 017051 237 LYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSKV-DR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEP 310 (378)
Q Consensus 237 ~~ysf~~g~--v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~-~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 310 (378)
.-..+.-|+ +.+.++. |.....-..++.+..... .. ....+.|++.|..........+-. .
T Consensus 229 ~pv~l~kg~~~valyGl~----y~~d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip---------e 295 (472)
T 4fbk_A 229 SPILLQKGFTKLALYGIS----NVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP---------E 295 (472)
T ss_dssp CCEEEEETTEEEEEEECC----CCCHHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSSCC---------G
T ss_pred EEEEEEeCCceEEEEecC----CCchhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCccccCC---------h
Confidence 011234444 3333442 222111123333322211 11 123468999998765432111100 1
Q ss_pred HHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 311 LLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 311 l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
-+...++|+|+.||+|..+...... ..++...+-+|+.....-..+.-.++++.+++++.
T Consensus 296 ~ll~~g~DyValGH~H~~~~~~~~~----~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~ 355 (472)
T 4fbk_A 296 SFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIATSLSPGETAPKHCGILNITG 355 (472)
T ss_dssp GGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEET
T ss_pred hhhhcCCCEEEecCcccceeeeccc----CCCCeEEEECCCccccccCccCCCCCEEEEEEEEC
Confidence 1345689999999999876542100 01355666667654332211223467888888864
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.6e-10 Score=110.43 Aligned_cols=216 Identities=15% Similarity=0.083 Sum_probs=113.2
Q ss_pred CCCCeEEEEEcccCCCCCh-------------HHHHHHhhcCCCcEEEeccccccccch-hhhHHHHHHhhHhhh-----
Q 017051 133 AQFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLA----- 193 (378)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~~-------------~~~~~~i~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~~l~----- 193 (378)
..+.+||++++|+|.+... ..+++.+.+.+||+||++||+++.... ......+.+.++.+.
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 3678999999999976421 345555668899999999999876543 233444455555431
Q ss_pred -----------------------------hCCceeecCCCCccCCCCcccchhhhch------hcccCCCCCCCCCCC--
Q 017051 194 -----------------------------SARPWMVTQGNHEKESIPLIMDAFQSYN------ARWKMPFEESGSNSN-- 236 (378)
Q Consensus 194 -----------------------------~~~P~~~v~GNHD~~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~-- 236 (378)
..+|++++.||||....... .....+. ..|.... ....
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~-l~~~~lL~~~glv~~fg~~~----~~e~i~ 183 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA-LCALDILSCAGFVNHFGRSM----SVEKID 183 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTT-BCHHHHHHHHTSEEECCCCC----CSSCEE
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccc-cCHHHHhccCCcEEEECCcC----ccccee
Confidence 25999999999998532110 0111111 1121100 0001
Q ss_pred -ceEEEEeCC--EEEEEEcCcCCCCCcHHHHHHHHHHhhh-----ccC---CCCCeEEEEeccccccCCCCCCCCchHHH
Q 017051 237 -LYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSK-----VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMM 305 (378)
Q Consensus 237 -~~ysf~~g~--v~fi~ldt~~~~~~~~~Q~~WL~~~L~~-----~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~ 305 (378)
.-..+.-|+ +.+.++. +.. .+ .+.+.+.. ... .+..+.|++.|......+....-.
T Consensus 184 ~~Pv~l~~g~~~valyGl~----~~~-~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~ip----- 250 (431)
T 3t1i_A 184 ISPVLLQKGSTKIALYGLG----SIP-DE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIP----- 250 (431)
T ss_dssp ECCEEEEETTEEEEEEEEC----CCC-HH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSSCC-----
T ss_pred eEEEEEecCCEeEEEEeCC----CCC-HH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCccccCC-----
Confidence 011233354 5555663 222 11 12222221 111 122368999998763221111101
Q ss_pred HHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 306 AIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 306 ~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
.-+...++|+++.||+|..+...... ...++..+-+|+.....-..+.-.++++.+++++.
T Consensus 251 ----~~l~~~~~Dyv~lGH~H~~~~~~~~~----~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lvei~~ 311 (431)
T 3t1i_A 251 ----EQFLDDFIDLVIWGHEHECKIAPTKN----EQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKG 311 (431)
T ss_dssp ----GGGSCTTCCEEEECSCCSCEEEEEEC----TTTCCEEEECCCSSCCSCCHHHHSCCEEEEEEEET
T ss_pred ----HhHhhCCCCEEEeccccccccccccc----CCCCEEEEeCCCCcccCcCcccCCCCEEEEEEEEC
Confidence 11334579999999999876543111 01356666667554322111123456778887764
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-11 Score=109.79 Aligned_cols=72 Identities=24% Similarity=0.230 Sum_probs=52.9
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHhhcCCCcEEEeccccccccch-hhhHHHHHHhhHhhhh-CCceee
Q 017051 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~~l~~-~~P~~~ 200 (378)
+||+++||+|.+... ..+++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|+++
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 589999999987531 234445567899999999999875432 2345556666777654 489999
Q ss_pred cCCCCccC
Q 017051 201 TQGNHEKE 208 (378)
Q Consensus 201 v~GNHD~~ 208 (378)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999985
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.04 E-value=2.7e-09 Score=92.68 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=47.7
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccch---hhh--HHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYM---QHR--WDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~---~~~--~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
.++++++||+|.... ..++++.+...++|+|+++||+++.+.. ... .....+.++.+. .|+++++||||.
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~ 100 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDS 100 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC--CceEEEECCCch
Confidence 489999999996521 2345555656789999999999975431 111 133344444432 589999999998
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=8.3e-09 Score=102.84 Aligned_cols=173 Identities=18% Similarity=0.160 Sum_probs=93.4
Q ss_pred CCCeEEEEEcccCCCC------------------ChHHHHHHhhcCCCc-EEEeccccccccchhh--hHHHHHHhhHhh
Q 017051 134 QFPITFAVAGDLGQTG------------------WTKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPL 192 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~------------------~~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~--~~~~~~~~~~~l 192 (378)
...++|+.++|+|..- .....++++.+.+|| +++.+||++....... ..+...+.+..+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l 106 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL 106 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc
Confidence 4579999999998531 113456666667787 8899999997543211 112222333332
Q ss_pred hhCCceeecCCCCccCCCCcccchhhhchhcccCCC---CC--CCC-----CCCceEEEEeCC--EEEEEEcCcCC----
Q 017051 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---EE--SGS-----NSNLYYSFDVAG--AHLIMLGSYAD---- 256 (378)
Q Consensus 193 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~~--~~~-----~~~~~ysf~~g~--v~fi~ldt~~~---- 256 (378)
-+-++++||||+.... +.+..+.+....|. +- ... ....|..++.++ +.|+++.+...
T Consensus 107 ---g~d~~~lGNHEfd~g~---~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 180 (552)
T 2z1a_A 107 ---RYRAMALGNHEFDLGP---GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREIS 180 (552)
T ss_dssp ---TCCEEECCGGGGTTCH---HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHS
T ss_pred ---CCCccccccccccCCH---HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhcc
Confidence 3447889999995421 12222222222221 10 000 123466678887 55666654310
Q ss_pred -------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh-cCCcEEEecCcccc
Q 017051 257 -------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (378)
Q Consensus 257 -------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y 328 (378)
+....++.+...+.|++ ++...+|+++|.|.... ..+.++ .+||++|+||+|..
T Consensus 181 ~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgGHtH~~ 242 (552)
T 2z1a_A 181 NPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGGHSHTL 242 (552)
T ss_dssp CCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEECSSCCC
T ss_pred CCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeCCcCcc
Confidence 01112333333333443 24556999999985320 122333 58999999999986
Q ss_pred ce
Q 017051 329 ER 330 (378)
Q Consensus 329 ~r 330 (378)
..
T Consensus 243 ~~ 244 (552)
T 2z1a_A 243 LG 244 (552)
T ss_dssp BS
T ss_pred cc
Confidence 54
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-08 Score=99.61 Aligned_cols=184 Identities=18% Similarity=0.177 Sum_probs=94.2
Q ss_pred CCeEEEEEcccCCCCC-----------hHHHHHHhhcC----CC-cEEEeccccccccchhh--hHHHHHHhhHhhhhCC
Q 017051 135 FPITFAVAGDLGQTGW-----------TKSTLDHIGQC----KY-DVHLLPGDLSYADYMQH--RWDTFGELVQPLASAR 196 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------~~~~~~~i~~~----~~-d~vi~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~ 196 (378)
..++|+.++|+|.... ....++++.+. ++ ++++.+||++....... ..+...+.+..+ -
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l---g 83 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV---G 83 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH---T
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc---C
Confidence 4689999999986522 12345555432 46 79999999985332111 122333444444 2
Q ss_pred ceeecCCCCccCCCCcccchhhhchhcccCCC---C----CCC-CCCCceEEEEeCC--EEEEEEcCcCC--CC------
Q 017051 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAG--AHLIMLGSYAD--YD------ 258 (378)
Q Consensus 197 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~~~~~ysf~~g~--v~fi~ldt~~~--~~------ 258 (378)
+-++++||||+.... +.+..+.+....|. + ..+ .....|..++.++ +.++++.+... +.
T Consensus 84 ~d~~~~GNHEfd~g~---~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~ 160 (516)
T 1hp1_A 84 YDAMAIGNHEFDNPL---TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFT 160 (516)
T ss_dssp CCEEECCGGGGSSCH---HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCT
T ss_pred CCEEeeccccccCCH---HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccC
Confidence 446789999995422 12222222111221 1 000 0113455677887 55666654321 11
Q ss_pred -----CcHHH-HHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 259 -----EYSDQ-YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 259 -----~~~~Q-~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
...+. .+|+++ |++. .+...+|+++|.|....... +........+...+...++|++|+||.|...
T Consensus 161 ~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 161 DIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp TEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred CcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCccc
Confidence 11122 233333 3321 14567999999997543221 1110011334333444569999999999754
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.81 E-value=5.5e-08 Score=96.39 Aligned_cols=208 Identities=17% Similarity=0.179 Sum_probs=107.7
Q ss_pred CCCeEEEEEcccCCCCC-----------------hHHHHHHhhcCCCc-EEEeccccccccchhhh-------HHHHHHh
Q 017051 134 QFPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR-------WDTFGEL 188 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~~-------~~~~~~~ 188 (378)
...++|+.++|+|..-. ....++++.+.+++ ++|.+||++........ .....+.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 35799999999985321 12456666666776 67889999964422110 1222233
Q ss_pred hHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCCC-----CCC--CCCceEEEEeCC--EEEEEEcCcC--CC
Q 017051 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEE-----SGS--NSNLYYSFDVAG--AHLIMLGSYA--DY 257 (378)
Q Consensus 189 ~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~-----~~~--~~~~~ysf~~g~--v~fi~ldt~~--~~ 257 (378)
+..+ -+-+.++||||+.... +.+..+.+....|.-. .+. ....|..++.++ +-||++.+.. .+
T Consensus 97 ln~l---g~D~~t~GNHefd~G~---~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~ 170 (527)
T 3qfk_A 97 YNRM---AFDFGTLGNHEFNYGL---PYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHW 170 (527)
T ss_dssp HHHT---CCCEECCCGGGGTTCH---HHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGT
T ss_pred HHhc---CCcEEeccccccccCH---HHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccc
Confidence 3332 2345679999985432 2222232222222110 000 013466677887 4556665421 11
Q ss_pred CC--------cHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCC------CCCchHHHHHHHHHHHhcCCcEEEec
Q 017051 258 DE--------YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAH------QGEGDGMMAIMEPLLYAASVDLVLAG 323 (378)
Q Consensus 258 ~~--------~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~------~~~~~~~~~~l~~l~~~~~vdlvl~G 323 (378)
.. .....+.+++.+++.+ ++.+.+|+++|.+........ .++.. ...+..-+ .-++|++|+|
T Consensus 171 ~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~--~~~la~~~-~~giDlIlgG 246 (527)
T 3qfk_A 171 EQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE--GYAMLEAF-SKDIDIFITG 246 (527)
T ss_dssp SCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC--HHHHHHHH-GGGCSEEECC
T ss_pred cCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH--HHHHHHhc-CCCCcEEEEC
Confidence 11 1123444555544443 256679999998754321100 11111 12222222 2489999999
Q ss_pred CccccceeecccCCCcCCCccEEEEeCCCCCCCCcc
Q 017051 324 HVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLA 359 (378)
Q Consensus 324 H~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~ 359 (378)
|+|...-.. .+++..+.+|+-|...+..
T Consensus 247 HtH~~~~~~--------v~~~~ivqag~~g~~lg~i 274 (527)
T 3qfk_A 247 HQHRQIAER--------FKQTAVIQPGTRGTTVGRV 274 (527)
T ss_dssp SSCCEEEEE--------ETTEEEEEECSTTSEEEEE
T ss_pred CCCcccceE--------ECCEEEeccChhhCEEEEE
Confidence 999854311 1367777778777654433
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=5.1e-08 Score=96.96 Aligned_cols=176 Identities=15% Similarity=0.168 Sum_probs=93.5
Q ss_pred CCCeEEEEEcccCCCCC---------------------hHHHHHHhhcCCC-cEEEeccccccccchhh--hHHHHHHhh
Q 017051 134 QFPITFAVAGDLGQTGW---------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQH--RWDTFGELV 189 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~---------------------~~~~~~~i~~~~~-d~vi~~GDl~~~~~~~~--~~~~~~~~~ 189 (378)
..+++|+.++|+|..-. ....++++.+.++ +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45699999999984311 1234556655566 59999999997543211 112233334
Q ss_pred HhhhhCCceeecCCCCccCCCCcccchhh-hchhcccCCCCCC---CC---------CCCceEEEEeCCEE--EEEEcCc
Q 017051 190 QPLASARPWMVTQGNHEKESIPLIMDAFQ-SYNARWKMPFEES---GS---------NSNLYYSFDVAGAH--LIMLGSY 254 (378)
Q Consensus 190 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~-~~~~~~~~p~~~~---~~---------~~~~~ysf~~g~v~--fi~ldt~ 254 (378)
..+ -+-++++||||+.... +.+. .+.+....|.-.. .. ....|.-++.++++ ||++.+.
T Consensus 103 n~l---g~d~~~~GNHEfd~g~---~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~ 176 (546)
T 4h2g_A 103 NAL---RYDAMALGNHEFDNGV---EGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSK 176 (546)
T ss_dssp HHH---TCSEEECCGGGGTTHH---HHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEECT
T ss_pred Hhc---CCcEEeccCcccccCH---HHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEeccc
Confidence 433 2336789999995321 1222 2222222221000 00 12346667888755 5555442
Q ss_pred C-----CCC---CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCcc
Q 017051 255 A-----DYD---EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (378)
Q Consensus 255 ~-----~~~---~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H 326 (378)
. ... ...+..+.+++.+++.+.++...+|+++|.+... ...+...+ -++|++|+||+|
T Consensus 177 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHtH 242 (546)
T 4h2g_A 177 ETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHSN 242 (546)
T ss_dssp THHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSSC
T ss_pred ccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCcC
Confidence 1 000 0012344455555444333467799999987431 11222211 379999999999
Q ss_pred ccc
Q 017051 327 AYE 329 (378)
Q Consensus 327 ~y~ 329 (378)
...
T Consensus 243 ~~~ 245 (546)
T 4h2g_A 243 TFL 245 (546)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3e-07 Score=90.62 Aligned_cols=207 Identities=17% Similarity=0.186 Sum_probs=102.5
Q ss_pred CCeEEEEEcccCCCCC-------------------hHHHHHHhhcCCCcEEEe-ccccccccchh--hhHHHHHHhhHhh
Q 017051 135 FPITFAVAGDLGQTGW-------------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQ--HRWDTFGELVQPL 192 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-------------------~~~~~~~i~~~~~d~vi~-~GDl~~~~~~~--~~~~~~~~~~~~l 192 (378)
..++|+.++|+|..-. ....++++.+.+++.+++ +||++...... ...+.. ++.+
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~---~~~l 81 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAI---IDIM 81 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHH---HHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHH---HHHH
Confidence 4589999999984311 133556666678887766 99998643211 111222 2222
Q ss_pred hhCCceeecCCCCccCCCCcccchhhhchhcccCCC---C----CCCC-C-CCceEEEEeCC--EEEEEEcCcC-----C
Q 017051 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESGS-N-SNLYYSFDVAG--AHLIMLGSYA-----D 256 (378)
Q Consensus 193 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~~-~-~~~~ysf~~g~--v~fi~ldt~~-----~ 256 (378)
..--+-+.++||||+.... +.+..+.+....|. + ..+. . ...|..++.++ +-||++-+.. .
T Consensus 82 n~lg~D~~tlGNHEfd~G~---~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~ 158 (509)
T 3ive_A 82 NTMPFDAVTIGNHEFDHGW---DNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTV 158 (509)
T ss_dssp TTSCCSEECCCGGGGTTCH---HHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHS
T ss_pred HhcCCcEEeecccccccCH---HHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccccc
Confidence 2223556789999985432 12222222222221 1 0010 0 23456678887 4556663310 0
Q ss_pred C----C--CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCC----CchHHHHHHHHHHHh-cCCcEEEecCc
Q 017051 257 Y----D--EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG----EGDGMMAIMEPLLYA-ASVDLVLAGHV 325 (378)
Q Consensus 257 ~----~--~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~----~~~~~~~~l~~l~~~-~~vdlvl~GH~ 325 (378)
+ . ...+..+.+++.+++.+. +.+.+|+++|.+.-........ ...... ..+.++ -++|++|+||.
T Consensus 159 ~~~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlIlgGHt 234 (509)
T 3ive_A 159 SAATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDILITGHA 234 (509)
T ss_dssp CGGGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEEEEESS
T ss_pred ccccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEEEeCCc
Confidence 0 0 012334555555555544 3677999999875322111000 001011 223333 37999999999
Q ss_pred cccceeecccCCCcCCCccEEEEeCCCCCCCC
Q 017051 326 HAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357 (378)
Q Consensus 326 H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~ 357 (378)
|..... |.. .++++.+.+|+-|...|
T Consensus 235 H~~~~~-~~~-----~~~~~ivqag~~g~~lg 260 (509)
T 3ive_A 235 HVGTPE-PIK-----VGNTLILSTDSGGIDVG 260 (509)
T ss_dssp CCCCSS-CEE-----ETTEEEECCCSTTSEEE
T ss_pred CccCCC-Cee-----eCCEEEEecChhhceeE
Confidence 964321 111 13455455555555433
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5.7e-07 Score=89.99 Aligned_cols=174 Identities=14% Similarity=0.139 Sum_probs=92.9
Q ss_pred CCeEEEEEcccCCCCC----------------------hHHHHHHhhcCCCc-EEEeccccccccchhh--hHHHHHHhh
Q 017051 135 FPITFAVAGDLGQTGW----------------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELV 189 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~----------------------~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~--~~~~~~~~~ 189 (378)
-.++|+.++|+|..-. ....++++.+.+++ ++|.+||++....... ..+...+.+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 3589999999984311 12345555555666 8899999997542211 112223333
Q ss_pred HhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCC---C---CCCC----CCCceEEEEeCC--EEEEEEcC-c--
Q 017051 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESGS----NSNLYYSFDVAG--AHLIMLGS-Y-- 254 (378)
Q Consensus 190 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~~~~----~~~~~ysf~~g~--v~fi~ldt-~-- 254 (378)
..+ -+-+.++||||+.... +.+..+.+....|. + ..+. .-..|.-++.++ +-||++.+ .
T Consensus 91 n~l---g~D~~tlGNHEfd~G~---~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~~ 164 (579)
T 3ztv_A 91 NAG---NFHYFTLGNHEFDAGN---EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKT 164 (579)
T ss_dssp HHH---TCSEEECCSGGGTTHH---HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHHH
T ss_pred Hhc---CcCeeeccccccccCH---HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCcc
Confidence 333 2345789999995321 22333333222221 1 0010 012455677887 55666643 1
Q ss_pred ---CCCCC---cHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh-cCCcEEEecCccc
Q 017051 255 ---ADYDE---YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (378)
Q Consensus 255 ---~~~~~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~ 327 (378)
..... ..+..+-+++.+++.+.++.+.+|+++|.+... ... +.++ -+||++|+||+|.
T Consensus 165 ~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~---la~~~~giDlIlgGHtH~ 229 (579)
T 3ztv_A 165 VNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIE---IAQKVNDIDVIVTGDSHY 229 (579)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHH---HHHHCSSCCEEEECSSCC
T ss_pred ccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHH---HHHhCCCCCEEEeCCCCc
Confidence 00000 122344455555554433466799999987421 112 2222 3799999999998
Q ss_pred cc
Q 017051 328 YE 329 (378)
Q Consensus 328 y~ 329 (378)
..
T Consensus 230 ~~ 231 (579)
T 3ztv_A 230 LY 231 (579)
T ss_dssp EE
T ss_pred cc
Confidence 65
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.66 E-value=4.1e-07 Score=90.56 Aligned_cols=173 Identities=12% Similarity=0.040 Sum_probs=87.2
Q ss_pred HHHHhhcC--C--Cc-EEEeccccccccchhh--hHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccC
Q 017051 154 TLDHIGQC--K--YD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKM 226 (378)
Q Consensus 154 ~~~~i~~~--~--~d-~vi~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~ 226 (378)
.++++.+. + || +++.+||++....... ..+...+.+..+. .+++ + ||||+.... +.+..+.+....
T Consensus 110 ~v~~~r~~~~~~gpd~Lll~~GD~~~gs~~~~~~~g~~~~~~ln~lg--~d~~-~-GNHEfd~G~---~~l~~~l~~~~~ 182 (562)
T 2wdc_A 110 LIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVG--VDHM-V-SHWEWTLGR---ERVEELLGLFRG 182 (562)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCSSSSHHHHHHTTHHHHHHHHHHT--CCEE-C-CSGGGGGCH---HHHHHHHHHCCS
T ss_pred HHHHHHhhhhcCCCCEEEEeCCCCCCcchhhhhhCCHHHHHHHHhhC--CcEE-e-cchhcccCH---HHHHHHHHhCCC
Confidence 34555443 3 88 8999999997543211 1123334444443 5665 6 999995321 223333332222
Q ss_pred CC---C----CCC-CCCCceEEEEeCC--EEEEEEcCcC-----------C--CCCcHHHHHHHHHHhhhccCCCCCeEE
Q 017051 227 PF---E----ESG-SNSNLYYSFDVAG--AHLIMLGSYA-----------D--YDEYSDQYRWLKDDLSKVDRKKTPWLL 283 (378)
Q Consensus 227 p~---~----~~~-~~~~~~ysf~~g~--v~fi~ldt~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~~~i 283 (378)
|. + ..+ .....|..++.++ +.+|++.+.. . +....+.+ ++.+++.+.++...+|
T Consensus 183 p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~l~~~~~d~iI 259 (562)
T 2wdc_A 183 EFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRL---QEAVDKARAEGANAVV 259 (562)
T ss_dssp EECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHH---HHHHHHHHHTTCSEEE
T ss_pred CEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHH---HHHHHHHHHCCCCEEE
Confidence 21 1 000 0112455677887 5566665421 0 11112232 3333322222456799
Q ss_pred EEeccccccCCCCCCCCchHHHHHHHHHHHh-cCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCC
Q 017051 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357 (378)
Q Consensus 284 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~ 357 (378)
+++|.|... . ..+.++ .++|++|+||.|..... +.. .++++.+.+|.-|...+
T Consensus 260 vLsH~g~~~------------d---~~la~~~~giDlIlgGHtH~~~~~-~~~-----~~~t~vvqag~~g~~lg 313 (562)
T 2wdc_A 260 LLSHNGMQL------------D---AALAERIRGIDLILSGHTHDLTPR-PWR-----VGKTWIVAGSAAGKALM 313 (562)
T ss_dssp EEECSCHHH------------H---HHHHTTSSSCCEEEECSSCCCCSS-CEE-----ETTEEEEECCSTTCEEE
T ss_pred EEeCCCCcc------------h---HHHHhcCCCCcEEEeCCCCCCCcc-CEE-----ECCEEEEecCccccEEE
Confidence 999998531 0 123333 48999999999985422 111 02455555676666433
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=98.64 E-value=2e-08 Score=88.05 Aligned_cols=67 Identities=25% Similarity=0.192 Sum_probs=44.6
Q ss_pred CCeEEEEEcccCCCCC-hHHHHHHhhc-CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 135 FPITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
...+++++||+|.... ..++++.+.. .++|.+|++||+++.+.... . .++.+. ..+++.++||||..
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~---~---~~~~l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---E---CLELIT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---H---HHGGGG-STTEEECCCHHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH---H---HHHHHh-cCCEEEEccCcHHH
Confidence 4578999999995421 2344555543 47899999999997554321 1 222232 25899999999983
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.8e-06 Score=74.51 Aligned_cols=180 Identities=18% Similarity=0.146 Sum_probs=96.0
Q ss_pred eEEEEEcccCCCCC----hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCc
Q 017051 137 ITFAVAGDLGQTGW----TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (378)
Q Consensus 137 ~~f~~~gD~~~~~~----~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 212 (378)
+|++++||.= +.. ....++++.+.. |++|..|+.+..+.... ....+.+..+. +-+ .+.||||++..
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~G--~Da-~TlGNHefD~~-- 71 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEAG--AGC-LTLGNHAWHHK-- 71 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHHT--CSE-EECCTTTTSST--
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhCC--CCE-EEeccccccCc--
Confidence 4899999982 211 234555665556 99998888876553211 12223333332 444 46699999642
Q ss_pred ccchhhhchhcc----cCCCCC--CCCCCCceEEEEeCCEE--EEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEE
Q 017051 213 IMDAFQSYNARW----KMPFEE--SGSNSNLYYSFDVAGAH--LIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (378)
Q Consensus 213 ~~~~~~~~~~~~----~~p~~~--~~~~~~~~ysf~~g~v~--fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (378)
....+.+.. -.|.|- .+..+..|.-++.++.+ +|.+-+.........-++-+++.+++. +.+.+|+
T Consensus 72 ---~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~IIv 145 (255)
T 1t70_A 72 ---DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVFV 145 (255)
T ss_dssp ---THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEEE
T ss_pred ---hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEEE
Confidence 112222211 123321 12223566678888744 555544321112223344566666655 4567999
Q ss_pred EeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
.+|.-. ....+.+.. .-.-+||+++.||+|.......+. ++|+.|++
T Consensus 146 ~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~il-----~~gt~~i~ 192 (255)
T 1t70_A 146 DFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQT 192 (255)
T ss_dssp EEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEES
T ss_pred EeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEc-----CCCeEEEE
Confidence 999521 111222222 233469999999999854433222 36788776
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=98.51 E-value=1.9e-06 Score=76.13 Aligned_cols=181 Identities=17% Similarity=0.193 Sum_probs=96.2
Q ss_pred eEEEEEcccCCCC---ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcc
Q 017051 137 ITFAVAGDLGQTG---WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (378)
Q Consensus 137 ~~f~~~gD~~~~~---~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~ 213 (378)
+|++++||.=... .....++++.+.. |++|..|..+..+.... +...+.+..+. +-++ +.||||++..
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~G--~D~~-T~GNHefD~~--- 71 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREAG--VDLV-SLGNHAWDHK--- 71 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHHT--CCEE-ECCTTTTSCT---
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhCC--CCEE-EeccEeeECc---
Confidence 4899999982111 1234566666666 99887777665443211 22223333332 4554 7799999642
Q ss_pred cchhhhchhcc--cCCCCCC-CCCCCceEEEEeCCEEEEEEc--CcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecc
Q 017051 214 MDAFQSYNARW--KMPFEES-GSNSNLYYSFDVAGAHLIMLG--SYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (378)
Q Consensus 214 ~~~~~~~~~~~--~~p~~~~-~~~~~~~ysf~~g~v~fi~ld--t~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (378)
....|.+.. -.|.+-+ +.....|.-++.++.++-+++ +.........-++-+++.+++.+ .+.+|+.+|.
T Consensus 72 --~l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H~ 146 (252)
T 2z06_A 72 --EVYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEVHA 146 (252)
T ss_dssp --THHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEEEC
T ss_pred --hHHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEeCC
Confidence 122222211 1222211 122356777888886655544 33211111222344566666553 5679999996
Q ss_pred ccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
-..+ ..+.+. ..-.-+||+|+.||+|.......+. ++|+.||+
T Consensus 147 g~ts-----------ek~~la-~~~dg~Vd~VvGgHTHv~t~d~~il-----~~gt~~it 189 (252)
T 2z06_A 147 EATS-----------EKMALA-HYLDGRASAVLGTHTHVPTLDATRL-----PKGTLYQT 189 (252)
T ss_dssp SCHH-----------HHHHHH-HHHBTTBSEEEEESSCSCBSCCEEC-----TTSCEEES
T ss_pred CcHH-----------HHHHHH-HhCCCCeEEEEcCCCCcCCCccEEc-----CCCcEeec
Confidence 4211 112222 2234569999999999854433222 46888876
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.49 E-value=4.4e-06 Score=82.91 Aligned_cols=200 Identities=13% Similarity=0.107 Sum_probs=97.8
Q ss_pred CCCeEEEEEcccCCCCC--------------hHHHHHHhh----cCCCc-EEEeccccccccchhh----hHHHHHHhhH
Q 017051 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQH----RWDTFGELVQ 190 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i~----~~~~d-~vi~~GDl~~~~~~~~----~~~~~~~~~~ 190 (378)
...++|+.++|+|..-. ..++...++ +.+++ ++|.+||++....... ..+...+.+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 46799999999986421 122222332 36788 5799999996432111 1111122222
Q ss_pred hhhhCCceeecCCCCccCCCCcccchhhhchhcccCCC---C-----CCCC---CCCceEEEEe--CCEE--EEEEcCcC
Q 017051 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----ESGS---NSNLYYSFDV--AGAH--LIMLGSYA 255 (378)
Q Consensus 191 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~-----~~~~---~~~~~ysf~~--g~v~--fi~ldt~~ 255 (378)
.+ -.-+.++||||+......-..+....+....|. + ..+. ....|..++. ++++ ||++.+..
T Consensus 93 ~l---g~Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~ 169 (557)
T 3c9f_A 93 KQ---DYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDF 169 (557)
T ss_dssp TS---CCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCC
T ss_pred hc---CCCEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCC
Confidence 22 233568899999643210011211122222221 1 0010 1134556777 7654 55554321
Q ss_pred C-------CCCcHHH-H-HHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh--cCCcE-EEec
Q 017051 256 D-------YDEYSDQ-Y-RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVDL-VLAG 323 (378)
Q Consensus 256 ~-------~~~~~~Q-~-~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~vdl-vl~G 323 (378)
. +....+. . +|+++.++ ++...+|+++|.+..... . . . ......+.+ .++|+ +|+|
T Consensus 170 ~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~-----d-~-~-~~~~~~lA~~~~giDilIlgG 237 (557)
T 3c9f_A 170 KRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-----G-E-F-YQVHQYLRQFFPDTIIQYFGG 237 (557)
T ss_dssp CCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-----C-H-H-HHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC-----c-c-c-cHHHHHHHHhCCCCCEEEECC
Confidence 1 1111111 1 36665442 256779999999863111 0 1 1 222233333 48994 9999
Q ss_pred CccccceeecccCCCcCCCccEEEEeCCCCCC
Q 017051 324 HVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (378)
Q Consensus 324 H~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~ 355 (378)
|.|..... +.. ++++.+-+|.-|..
T Consensus 238 HtH~~~~~-~~~------~~t~ivqaG~~g~~ 262 (557)
T 3c9f_A 238 HSHIRDFT-VFD------SLSTGLQSGRYCET 262 (557)
T ss_dssp SSCCEEEE-EEE------TTEEEEEECSTTSE
T ss_pred CCCCCCcc-eec------CCeEeeeccchhcE
Confidence 99986321 111 34555556655543
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.47 E-value=2.8e-06 Score=76.35 Aligned_cols=184 Identities=16% Similarity=0.154 Sum_probs=97.9
Q ss_pred CeEEEEEcccCCCCCh---HHHHHHhhcC-CCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCC
Q 017051 136 PITFAVAGDLGQTGWT---KSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~~---~~~~~~i~~~-~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~ 211 (378)
.+|++++||++..... ...++++.+. ++|+++..||.+..+... .....+.+..+. +- ..+.||||++...
T Consensus 4 ~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~G--~D-a~TlGNHefD~g~ 78 (281)
T 1t71_A 4 SIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEAG--VN-YITMGNHTWFQKL 78 (281)
T ss_dssp CCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHHT--CC-EEECCTTTTCCGG
T ss_pred eEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhcC--CC-EEEEccCcccCCc
Confidence 5899999999633211 2334444433 689999999998655321 122223333332 33 3477999996541
Q ss_pred cccchhhhchhc--ccCCCCCC-CC----CCCceEEEEeCCE--EEEEEcCcCCCC--CcHHHHHHHHHHhhhccCCCCC
Q 017051 212 LIMDAFQSYNAR--WKMPFEES-GS----NSNLYYSFDVAGA--HLIMLGSYADYD--EYSDQYRWLKDDLSKVDRKKTP 280 (378)
Q Consensus 212 ~~~~~~~~~~~~--~~~p~~~~-~~----~~~~~ysf~~g~v--~fi~ldt~~~~~--~~~~Q~~WL~~~L~~~~~~~~~ 280 (378)
. ...|.+. .-.|.+-+ .. .+..|.-++.+++ -+|.+-+...+. ....-++.+++.++ +++.+
T Consensus 79 ~----~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~~d 151 (281)
T 1t71_A 79 D----LAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRDCD 151 (281)
T ss_dssp G----HHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCCCS
T ss_pred c----HHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcCCC
Confidence 1 1112211 11121111 11 2345667888774 455554432121 12223455666666 23677
Q ss_pred eEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
.+||.+|.-. ......+.. .-.-+||+++.||+|.......+. ++|+.||+
T Consensus 152 iIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~il-----~~gt~~i~ 202 (281)
T 1t71_A 152 LHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSADLRIT-----PKGSAYIT 202 (281)
T ss_dssp EEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTTCEEC-----TTSCEEES
T ss_pred EEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEe-----cCCcEEEe
Confidence 8999999521 111122222 223469999999999854433222 36788876
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=6.9e-06 Score=76.47 Aligned_cols=217 Identities=14% Similarity=0.113 Sum_probs=102.2
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHhhcCCCc-EEEeccccccccchhhhHHHHH----------
Q 017051 135 FPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFG---------- 186 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~~~~~~~---------- 186 (378)
..++|+..+|+|..-. ....++++.+.+++ ++|.+||++..... ..+-...
T Consensus 10 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs~~-~~~~~~~~~~~g~~~g~ 88 (341)
T 3gve_A 10 VHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGNPL-GEYAVKYQKDDIISGTK 88 (341)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHH-HHHHHHHHHHHHHHTSS
T ss_pred eEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCcHH-HHHhhhccccccccccc
Confidence 3588999999985321 12345555555565 66899999964322 1111110
Q ss_pred --HhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCC---C---CCCC-CCCceEEEEe-----C----C--E
Q 017051 187 --ELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESGS-NSNLYYSFDV-----A----G--A 246 (378)
Q Consensus 187 --~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~---~~~~-~~~~~ysf~~-----g----~--v 246 (378)
..++.+..--.=+.++||||++.... .+..+.+....|. + ..+. .-..|.-++. + + +
T Consensus 89 ~~~~~~~ln~lg~Da~tlGNHEfd~G~~---~L~~~~~~~~fp~l~aNv~~~~g~~~~~py~I~~~~~~~~~G~~~gvkI 165 (341)
T 3gve_A 89 THPIISVMNALKYDAGTLGNHEFNYGLD---FLDGTIKGADFPIVNANVKTTSGENRYTPYVINEKTLIDENGNEQKVKV 165 (341)
T ss_dssp CCHHHHHHHHTTCCBEECCGGGGTTCHH---HHHHHHHTCSSCEECSSEECTTSCBSSCCEEEEEEEEECTTSCEEEEEE
T ss_pred ccHHHHHHHhhCCCeeeccchhhccCHH---HHHHHHHhcCCCEEEEeeECCCCCCccCCeEEEEEeeeccCCCcCCeEE
Confidence 11122211123346789999964321 2222222222221 1 0111 0123444454 2 3 5
Q ss_pred EEEEEcCcCC--CC--------CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcC
Q 017051 247 HLIMLGSYAD--YD--------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS 316 (378)
Q Consensus 247 ~fi~ldt~~~--~~--------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~ 316 (378)
-||++-+... +. ...+..+.+++.+++.+.++...+|+++|............++. ...+..-+ -+
T Consensus 166 gviG~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~~--~~~lA~~v--~g 241 (341)
T 3gve_A 166 GYIGFVPPQIMTWDKKNLEGQVQVQDIVESANETIPKMKAEGADVIIALAHTGIEKQAQSSGAENA--VFDLATKT--KG 241 (341)
T ss_dssp EEEEECCTTHHHHTHHHHTTTCEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSSC--HHHHHHHC--SC
T ss_pred EEEEeccCcccccccccccCceEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCccccccccccchh--HHHHHhcC--CC
Confidence 5666654210 00 00122333444444433335778999999876432211111111 11222212 47
Q ss_pred CcEEEecCccccceeecccCCC---cC----CCccEEEEeCCCCCCCCccc
Q 017051 317 VDLVLAGHVHAYERSIRVNNGK---PD----PCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 317 vdlvl~GH~H~y~r~~~~~~~~---~~----~~g~~yiv~G~gG~~~~~~~ 360 (378)
+|++|.||+|..... +.+... .. .+++..+.+|.-|...|...
T Consensus 242 iD~IigGHsH~~~~~-~~~~~~~~~~~~~g~v~~~~vvqag~~g~~lg~id 291 (341)
T 3gve_A 242 IDAIISGHQHGLFPS-AEYAGVAQFNVEKGTINGIPVVMPSSWGKYLGVID 291 (341)
T ss_dssp CCEEEECSSCCEESC-GGGTTSTTEETTTTEETTEEEEEECSTTSEEEEEE
T ss_pred CcEEEECCCCccCCC-cccccccccccccccCCCEEEEeCChhhcEEEEEE
Confidence 999999999975321 111110 01 13566677777776555443
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.1e-05 Score=71.08 Aligned_cols=215 Identities=17% Similarity=0.113 Sum_probs=100.9
Q ss_pred CCeEEEEEcccCCCCC-----------------hHHHHHHhhcCCCc-EEEeccccccccchhhhHHHHHH-------hh
Q 017051 135 FPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFGE-------LV 189 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------------~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~~~~~~~~-------~~ 189 (378)
-.++|+..+|+|..-. ....++++.+..++ ++|.+||++..... ..+..... .+
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccchHH
Confidence 3588999999985321 12355666666665 77899999964322 11111100 11
Q ss_pred HhhhhCC-ceeecCCCCccCCCCcccchhhhchhcccCCC---C----CCCC-CCCceEEEEe-----C----C--EEEE
Q 017051 190 QPLASAR-PWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESGS-NSNLYYSFDV-----A----G--AHLI 249 (378)
Q Consensus 190 ~~l~~~~-P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~~-~~~~~ysf~~-----g----~--v~fi 249 (378)
-.++..+ .=+.++||||+..... .+..+.+....|. | ..+. .-..|.-++. + + +-||
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~G~~---~l~~~~~~a~fp~l~aNv~~~~~g~~~~~py~I~~~~v~~~~G~~~gvkIgvi 162 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNYGLD---FLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYI 162 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTTCHH---HHHHHHHTCSSCEECSSEEETTTSSBSSCCEEEEEEEEECTTSCEEEEEEEEE
T ss_pred HHHHHhcCCCEEecchhhhhccHH---HHHHHHHhcCCceeeeeeeecCCCCcccCCeEEEEEEeeccCCCcCCeEEEEE
Confidence 1222222 3356789999964321 2222222222221 1 0111 0123444554 3 3 5566
Q ss_pred EEcCcCC--CC--------CcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHh-cCCc
Q 017051 250 MLGSYAD--YD--------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVD 318 (378)
Q Consensus 250 ~ldt~~~--~~--------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vd 318 (378)
++-+... +. ...+..+-+++.+++.+.+++..+|+++|...-........++. .. ++++ -++|
T Consensus 163 G~~~p~~~~~~~~~~~g~~~~~d~~e~~~~~v~~lr~~g~D~II~l~H~G~~~d~~~~~~en~---~~---~~~~v~gID 236 (339)
T 3jyf_A 163 GFVPPQIMTWDKANLNGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENS---VY---YLSQVPGVD 236 (339)
T ss_dssp EECCTTHHHHTHHHHTTTEEECCHHHHHHHHHHHHHHTTCSEEEEEECCCCCCSCCCTTCSCC---HH---HHTTSTTCC
T ss_pred ecccCcccccccccccCCeEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCccccccccccchh---HH---HHhhCCCCC
Confidence 6654210 00 00112233333333333235778999999876322111011111 11 1222 3799
Q ss_pred EEEecCccccceeecccC---CCcC----CCccEEEEeCCCCCCCCccc
Q 017051 319 LVLAGHVHAYERSIRVNN---GKPD----PCGAVYITIGDGGNKEGLAR 360 (378)
Q Consensus 319 lvl~GH~H~y~r~~~~~~---~~~~----~~g~~yiv~G~gG~~~~~~~ 360 (378)
++|.||+|..... +.+. +... .+++..+.+|.-|...|...
T Consensus 237 ~IlgGHsH~~~~~-~~~~~~~g~~~~~g~vn~v~vvqag~~G~~lg~id 284 (339)
T 3jyf_A 237 AIMFGHAHAVFPG-KDFANIKGADIAKGTLNGVPAVMPGMWGDHLGVVD 284 (339)
T ss_dssp EEEECSSCSEESS-GGGTTSTTEETTTTEETTEEEEEECSTTSEEEEEE
T ss_pred EEEeCCCcccccc-ccccccCCccccCccCCCEEEEcCCcccccceEEE
Confidence 9999999985321 1111 1001 12555677777776554433
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.01 E-value=8.9e-05 Score=73.35 Aligned_cols=169 Identities=16% Similarity=0.150 Sum_probs=85.2
Q ss_pred CeEEEEEcccCCCCC---------------------hHHHHHHhhcCCCc-EEEeccccccccchhhh--HHHHHHhhHh
Q 017051 136 PITFAVAGDLGQTGW---------------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR--WDTFGELVQP 191 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~---------------------~~~~~~~i~~~~~d-~vi~~GDl~~~~~~~~~--~~~~~~~~~~ 191 (378)
.++|+..+|+|..-. ....++++.+.+++ ++|.+||++........ .+...+.+..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478899999974210 12345555555665 67889999975432111 1111222222
Q ss_pred hhhCCceeecCCCCccCCCCcccchh-hhchhcccCCC---CC--C-------CCCCCceEEEEeCCEE--EEEEcCcC-
Q 017051 192 LASARPWMVTQGNHEKESIPLIMDAF-QSYNARWKMPF---EE--S-------GSNSNLYYSFDVAGAH--LIMLGSYA- 255 (378)
Q Consensus 192 l~~~~P~~~v~GNHD~~~~~~~~~~~-~~~~~~~~~p~---~~--~-------~~~~~~~ysf~~g~v~--fi~ldt~~- 255 (378)
+ -.=..++||||++.... .+ ..+.+....|. |- . ...-..|.-++.++++ ||++-+..
T Consensus 83 l---gyDa~~lGNHEFd~G~~---~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~ 156 (530)
T 4h1s_A 83 L---RYDAMALGNHEFDNGVE---GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKET 156 (530)
T ss_dssp T---TCCEEECCGGGGTTTTH---HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTH
T ss_pred c---CCCEEEEchhhhccCHH---HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccce
Confidence 2 23356899999964322 11 11222222221 10 0 0011346667888755 55554421
Q ss_pred ----C------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecC
Q 017051 256 ----D------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGH 324 (378)
Q Consensus 256 ----~------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH 324 (378)
. +....+..+..-+.|++ ++...+|+++|.... ... .+.++. ++|+++.||
T Consensus 157 ~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------~d~---~la~~v~giD~IlgGH 218 (530)
T 4h1s_A 157 PFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------MDK---LIAQKVRGVDVVVGGH 218 (530)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------HHH---HHHHHSTTCCEEECCS
T ss_pred eeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------HHH---HHHhcCCCCCeeccCC
Confidence 0 11112222333333443 356679999997531 111 223333 799999999
Q ss_pred cccc
Q 017051 325 VHAY 328 (378)
Q Consensus 325 ~H~y 328 (378)
+|..
T Consensus 219 sH~~ 222 (530)
T 4h1s_A 219 SNTF 222 (530)
T ss_dssp SCCC
T ss_pred ccce
Confidence 9974
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00028 Score=55.25 Aligned_cols=90 Identities=17% Similarity=0.084 Sum_probs=58.7
Q ss_pred cCCCCCCCCCCceEEEEecCCCeEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEE
Q 017051 33 FPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (378)
Q Consensus 33 ~~~~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 104 (378)
.+....+...|..+++...+++++.|+|....... .-.|+|+......... ... ......+
T Consensus 12 ~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~--------~~~---~~~~~~~ 80 (123)
T 2edd_A 12 VPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKY--------KSE---DTTSLSY 80 (123)
T ss_dssp CSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCC--------CCE---EESSSEE
T ss_pred CCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccE--------EEE---eCCceEE
Confidence 34444566799999998788999999998653221 3467787653211100 000 0013457
Q ss_pred EECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 017051 105 VIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
+|+||+|+|.|.++|.. +|....|+|.+.
T Consensus 81 ~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 81 TATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred EecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 79999999999999863 256778888763
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00037 Score=53.26 Aligned_cols=86 Identities=21% Similarity=0.263 Sum_probs=56.4
Q ss_pred CCCCCCceEEEEec--CCCeEEEEEEcCCCCC----CcEEEEeccCCCC--CeeEEeeeeEEeeeeeccCeEEEEEECCC
Q 017051 38 KPSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGY--NCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (378)
Q Consensus 38 ~~~~~p~~v~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~~l~~L 109 (378)
.+...|..+.+... +.+++.|+|....... .-.|+|....... ..... ........++|++|
T Consensus 7 ~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L 76 (114)
T 2ede_A 7 GPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIME----------TISGDRLTHQIMDL 76 (114)
T ss_dssp CCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEE----------EEETTCCEEEECSC
T ss_pred CCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEE----------EECCCceEEEEcCC
Confidence 44568999988877 6799999998764322 3467776643221 11100 01123345789999
Q ss_pred CCCCEEEEEeCc--------cCceeEEECCCC
Q 017051 110 EHDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
+|++.|.+||.. .|....|+|++.
T Consensus 77 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 77 NLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp CSSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred CCCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 999999999864 256778888764
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00037 Score=53.49 Aligned_cols=88 Identities=11% Similarity=0.137 Sum_probs=55.5
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...+.+++.|+|..... ...-.|+|.............. . ..+....++|++|+|
T Consensus 7 ~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~-----~---~~~~~~~~~i~~L~p 78 (114)
T 1x4y_A 7 GPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD-----M---VEGDRYWHSISHLQP 78 (114)
T ss_dssp SCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE-----E---EETTCCEEEECSCCT
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE-----e---cCCcEeEEEcCCCCC
Confidence 4456888888887789999999997741 1224677765443210000000 0 011124578999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
+|.|.++|.. .|+...++|.+.
T Consensus 79 ~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 79 ETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp TCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred CCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999999864 256778888764
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.60 E-value=3.3e-05 Score=69.23 Aligned_cols=65 Identities=17% Similarity=0.128 Sum_probs=42.6
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCC-cEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~-d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
.+++++||+|... ...++++.+...++ |.+|++||+++.+.... + ....+.. .++++++||||..
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~--~-~l~~l~~----~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF--G-VVRLLKR----LGAYSVLGNHDAK 85 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH--H-HHHHHHH----HTCEECCCHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH--H-HHHHHHH----CCCEEEeCcChHH
Confidence 4899999999432 12345555555555 99999999997654321 1 1222221 4899999999983
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00049 Score=51.97 Aligned_cols=85 Identities=19% Similarity=0.139 Sum_probs=52.9
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
++. |..+.+...+.+ +.|+|....... .-.|+|............ . .. ...+....++|++|+|+|
T Consensus 7 P~~-P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~-~-----~~-~~~~~~~~~~i~~L~p~t 77 (105)
T 2haz_A 7 PSS-PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW-Y-----DA-KEASMEGIVTIVGLKPET 77 (105)
T ss_dssp CCC-CEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEE-E-----EH-HHHHHHSEEEECSCCTTC
T ss_pred CcC-CCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccce-E-----Ec-cccCCccEEEECCCCCCC
Confidence 344 888877766677 999999764321 235777765532121100 0 00 111123456799999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 017051 114 VYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
.|.+||.. .|+...|+|.|
T Consensus 78 ~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 78 TYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 99999864 26677888876
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00016 Score=54.19 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=51.6
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCC--CC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDD--ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...+.+++.|+|.... .. ..-.|+|............+ ....++|+||+|
T Consensus 7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p 73 (103)
T 2edy_A 7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKP 73 (103)
T ss_dssp CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCT
T ss_pred CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCC
Confidence 344578888777667899999998772 11 22356676654321111111 123356899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
++.|.++|.. .|+...|+|.|
T Consensus 74 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 74 DTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp TCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 9999999864 24556677655
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0017 Score=49.90 Aligned_cols=84 Identities=21% Similarity=0.255 Sum_probs=55.9
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCC-CC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDD-ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
...|..+++...+.+++.|.|.... .. ..-.|+|........... . ........++|++|+|+|.
T Consensus 18 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~-------~---~~~~~~~~~~i~~L~p~t~ 87 (120)
T 1x5f_A 18 PSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVE-------N---TSHPGEMQVTIQNLMPATV 87 (120)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEE-------E---CSSTTCSEEEECSCCTTCE
T ss_pred CCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEE-------E---eccCCccEEEeCCCCCCCE
Confidence 3589999888888999999998764 22 124677766543221110 0 1112344578999999999
Q ss_pred EEEEeCc--------cCceeEEECCCC
Q 017051 115 YFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|.+||.. .|+...|+|.+.
T Consensus 88 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 88 YIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 9999864 256677888653
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00027 Score=54.43 Aligned_cols=84 Identities=17% Similarity=0.194 Sum_probs=53.9
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
+...|..+++...+++++.|+|.-..... .-.|+|+........ +.. .......++|+||+
T Consensus 8 pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~--------~~~---~~~~~~~~~i~gL~ 76 (113)
T 1x5j_A 8 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--------YKN---ANATTLSYLVTGLK 76 (113)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--------CEE---CCBCSSEEEEESCC
T ss_pred CCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE--------EEE---EecCcCEEEeCCCC
Confidence 34589999998888999999998653221 245677763211010 000 11123457899999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 017051 111 HDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|+|.|.++|.. +|....++|.+.
T Consensus 77 P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 77 PNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp TTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred CCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 99999999864 255666777653
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.46 E-value=8.5e-05 Score=67.13 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=43.2
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhc-CCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~-~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~ 208 (378)
++++++||+|.... ..++++.+.. .++|.+|++||+++.+.... .....+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhCC--CceEEEECCCcHH
Confidence 46899999985421 2344455444 57899999999997654321 1223333332 3799999999973
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0011 Score=49.96 Aligned_cols=76 Identities=14% Similarity=0.207 Sum_probs=47.7
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.++..|..+.+...+++++.|+|..... . ..-.|.|............ ... . ... ..+++|++|+|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~--~~~--v--~~~--~~~~~l~~L~p 74 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYK--RDV--V--EGS--KQWHMIGHLQP 74 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCE--EEE--E--ETT--CSEEEECSCCT
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceE--EEE--E--cCC--ceEEECCCCCC
Confidence 3556899998888889999999987642 1 1236788876432100000 000 0 111 22468999999
Q ss_pred CCEEEEEeCc
Q 017051 112 DTVYFYRCGR 121 (378)
Q Consensus 112 ~t~Y~Y~v~~ 121 (378)
+|.|.++|..
T Consensus 75 ~t~Y~v~V~A 84 (102)
T 3n1f_C 75 ETSYDIKMQC 84 (102)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999864
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00084 Score=50.74 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=52.6
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+...+.+++.|+|.-...... -.|+|............ .......++|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----------ARSQTNTARIDGLRPGMVYVV 78 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----------EEESSSEEEEESCCTTCEEEE
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----------EecCccEEEEcCCCCCCEEEE
Confidence 677777877789999999987643322 34566554432111100 001123467899999999999
Q ss_pred EeCc--------cCceeEEECCCC
Q 017051 118 RCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 118 ~v~~--------~s~~~~F~t~p~ 133 (378)
||.. .|....|+|++.
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 79 QVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEeCCEECCCCCCEEEEeCCC
Confidence 9864 256778999875
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00062 Score=51.50 Aligned_cols=80 Identities=18% Similarity=0.222 Sum_probs=51.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+++++.|+|......+ .-.|+|............+ ....++|++|+|++.|.
T Consensus 9 ~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y~ 75 (106)
T 1x4x_A 9 DQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTYY 75 (106)
T ss_dssp CCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEEE
T ss_pred CCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEEE
Confidence 366666677667999999998764322 2356676544221111111 11246789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 017051 117 YRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (378)
|||.. .|+...++|++.
T Consensus 76 frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 76 CRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEcCCcCCCCcCCEEEECCCC
Confidence 99864 256778888764
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.002 Score=49.43 Aligned_cols=85 Identities=16% Similarity=0.262 Sum_probs=54.9
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
....|..+.+...+.+++.|.|.-...... -.|+|............ ........++|++|+|++.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 17 LPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----------TTQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp SCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----------CCCTTCCEEEECSCCSSSE
T ss_pred CCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----------eecCCceEEEeCCCCCCCE
Confidence 335888998887789999999987643222 34556554432221110 1112245578999999999
Q ss_pred EEEEeCc--------cCceeEEECCCC
Q 017051 115 YFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|.+||.. .|+...++|.+.
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 9999864 256677888653
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0027 Score=47.93 Aligned_cols=78 Identities=19% Similarity=0.217 Sum_probs=51.3
Q ss_pred CCceEEEEe--cCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 42 HPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 42 ~p~~v~l~~--~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.|..+.+.. .+.+++.|+|.-...... -.|+|............ .. ...++|++|+|+|.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~---~~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR----------AA---SNFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE----------ES---SSEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec----------CC---ccEEEeCCCCCCCEE
Confidence 788888776 368899999997743222 35666655432221111 11 126779999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 017051 116 FYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (378)
.+||.. .|+...++|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999864 25677788854
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0027 Score=47.80 Aligned_cols=83 Identities=19% Similarity=0.215 Sum_probs=51.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+.+++.|+|.-.... ..-.|+|.......... .. ...+....++|+||+|||.|.++|
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~------~v~~~~~~~~l~~L~p~t~Y~~~V 73 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRT----TI------DLTEDENQYSIGNLKPDTEYEVSL 73 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCE----EE------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceE----EE------EcCCCcCEEEeCCCCCCCEEEEEE
Confidence 47889988877899999999765422 22367776543211110 00 011223456899999999999998
Q ss_pred Ccc-------CceeEEECCCC
Q 017051 120 GRQ-------GPEFEFKTPPA 133 (378)
Q Consensus 120 ~~~-------s~~~~F~t~p~ 133 (378)
..- .....|+|.+.
T Consensus 74 ~A~~~~g~s~p~~~~~~T~~~ 94 (104)
T 2rb8_A 74 ISRRGDMSSNPAKETFTTGLA 94 (104)
T ss_dssp EEEETTEECCCEEEEEECCC-
T ss_pred EEEeCCccCCCEEEEEECCCC
Confidence 641 22356777654
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0029 Score=47.22 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=47.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+++++.|+|.-.... ..-.|+|........... . ........++|+||+|+|.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~----~------~~~~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 3 QPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETT----V------DLTSSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEE----E------EECTTEEEEEECSCCTTCEEEEEE
T ss_pred ccCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceE----E------EECCcceEEEECCCCCCCEEEEEE
Confidence 47888888877899999999876432 234677875542211110 0 112345567899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 73 ~A 74 (100)
T 3b83_A 73 VA 74 (100)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0011 Score=49.95 Aligned_cols=71 Identities=10% Similarity=0.136 Sum_probs=46.6
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
..|..+++...+.+++.++|.-......-.|+|............ .. ..... .++|+||+|+|.|.++|.
T Consensus 10 ~~P~~l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~----~~----~~~~~--~~~l~~L~p~t~Y~~~V~ 79 (104)
T 2dkm_A 10 PPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER----EV----QVGRP--EVLLDGLEPGRDYEVSVQ 79 (104)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE----EE----EESSS--EEEEESCCTTCCEEEEEE
T ss_pred CCCceeEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE----EE----ecCCC--EEEECCCCCCCEEEEEEE
Confidence 478888888888999999997654333346777655432111000 00 01112 788999999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 80 A 80 (104)
T 2dkm_A 80 S 80 (104)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0024 Score=47.94 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=51.8
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+...+.+++.|+|...... ..-.|+|............ .. ...++|++|+|+|.|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE-----------VD--GLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE-----------EC--SSCEEEESCCTTCEEEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe-----------CC--ccEEEECCCCCCCEEEE
Confidence 7889988877899999999876322 2235667655432111110 01 23467899999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 017051 118 RCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 118 ~v~~--------~s~~~~F~t~p 132 (378)
||.. .|....++|..
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCC
Confidence 9864 25667788854
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=50.64 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=55.0
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.+...|..+++...+.+++.|+|..... ...-.|+|........... .. ...+....++|+||+|+|.|
T Consensus 17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~-----~~----~~~~~~~~~~i~~L~p~t~Y 87 (119)
T 2ee2_A 17 APSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN-----RV----QVTSQEYSARLENLLPDTQY 87 (119)
T ss_dssp CCCCCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE-----EE----EEETTCSEEEECSCCTTCEE
T ss_pred CCCCCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcE-----EE----EcCCCEeEEEECCCCCCCEE
Confidence 4455787888877779999999987642 1234677765442211000 00 01122346789999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 017051 116 FYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.+||.. .|+...|+|.+.
T Consensus 88 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ee2_A 88 FIEVGACNSAGCGPPSDMIEAFTKKA 113 (119)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEEcCCccCCCCCCEEEECCCC
Confidence 999864 256677888653
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0016 Score=49.39 Aligned_cols=82 Identities=12% Similarity=0.200 Sum_probs=52.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+.+++.|.|....... .-.|+|............ .......++|++|+|++.|.
T Consensus 12 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 80 (111)
T 1x5l_A 12 SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----------LKAVTTRATVSGLKPGTRYV 80 (111)
T ss_dssp CCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----------EEESSSEEEECSCCTTCEEE
T ss_pred CCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEE-----------ecCCCCEEEEcCCCCCCEEE
Confidence 357777666566899999998764321 236777665421111100 01112356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 017051 117 YRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (378)
+||.. .|....|+|++.
T Consensus 81 ~~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 81 FQVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp ECEEEEETTEECCCCCCEEEECCCT
T ss_pred EEEEEEeCCcCCCCcccEEEEcCCC
Confidence 99864 367788988775
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0013 Score=50.31 Aligned_cols=80 Identities=18% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+.+++.|+|...... ..-.|+|............. ....++|++|+|+|.|.
T Consensus 19 ~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~ 85 (116)
T 1x5g_A 19 GPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEYS 85 (116)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEEE
T ss_pred cCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEEE
Confidence 47888888877899999999876322 23467776654322211111 12356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 017051 117 YRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (378)
+||.. .|+...|+|.+.
T Consensus 86 ~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 86 FRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEEEEEcCCCcCCCCCCEEEECCCC
Confidence 99864 255677888653
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.002 Score=49.61 Aligned_cols=89 Identities=16% Similarity=0.207 Sum_probs=56.7
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+++...+.+++.|+|..... . ..-.|+|........... .... . ...+....++|++|+|
T Consensus 14 ~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~---~-~~~~~~~~~~i~~L~p 87 (122)
T 1va9_A 14 APDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY--SIVE---M-KATGDSEVYTLDNLKK 87 (122)
T ss_dssp CCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC--BCCB---C-CCCSSEEEEEEESCCS
T ss_pred CCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce--EEEE---E-ecCCceeEEEeCCCCC
Confidence 3445788998887789999999998743 1 223677766543211100 0000 0 1223456778999999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
+|.|.++|.. .|....|+|.+
T Consensus 88 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 116 (122)
T 1va9_A 88 FAQYGVVVQAFNRAGTGPSSSEINATTLE 116 (122)
T ss_dssp SCCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred CCEEEEEEEEEcCCCCCCCccCEEEEeCC
Confidence 9999999864 25567777765
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00043 Score=64.38 Aligned_cols=72 Identities=13% Similarity=-0.035 Sum_probs=44.3
Q ss_pred CCCeEEEEEcccCCCCC-hHHHHHHhhc--------CCCcEEEeccccccccchhhhHHHHHHhhHhh-----hhCCcee
Q 017051 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ--------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPL-----ASARPWM 199 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~~~~i~~--------~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l-----~~~~P~~ 199 (378)
....+++++||+|.... ..++++.+.. .++|.+|++||+++.+....+ ....+..+ ....+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e---vl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE---VLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH---HHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH---HHHHHHHHHHHHhhCCCeEE
Confidence 45689999999985421 1233333321 157999999999986653221 12222222 2235699
Q ss_pred ecCCCCccC
Q 017051 200 VTQGNHEKE 208 (378)
Q Consensus 200 ~v~GNHD~~ 208 (378)
.+.||||..
T Consensus 145 ~v~GNHE~~ 153 (342)
T 2z72_A 145 LLMGNHEQM 153 (342)
T ss_dssp ECCCHHHHH
T ss_pred EEecCCcHH
Confidence 999999983
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.002 Score=48.24 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=52.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
..|..+.+...+.+++.|.|..... ...-.|+|............ .......++|++|+|++.|.||
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 77 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEV-----------DGVATTRYSIGGLSPFSEYAFR 77 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCB-----------CCCCSSEEEEESCCTTCEEEEE
T ss_pred cCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEc-----------cCCCccEEEEeCCCCCcEEEEE
Confidence 4788888887779999999997631 12346777665432111100 0111224578899999999999
Q ss_pred eCc--------cCceeEEECCCC
Q 017051 119 CGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 119 v~~--------~s~~~~F~t~p~ 133 (378)
|.. .|+...++|.+.
T Consensus 78 V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 78 VLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EEEECSSCBCCCCCCEEEECCCS
T ss_pred EEEEeCCccCCCcccEEeEcCCC
Confidence 864 255667777653
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0017 Score=49.25 Aligned_cols=80 Identities=14% Similarity=0.189 Sum_probs=52.8
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCC--CCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGG--YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.|..+++...+.+++.|+|.-..... .-.|+|....+. ...... .... ..++|++|+|++.|
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~----------~~~~--~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL----------KTSE--NRAELRGLKRGASY 77 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE----------EESS--SEEEEESCCTTSCE
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE----------ccCC--CEEEECCCCCCCeE
Confidence 57788888778999999998764322 246777665411 111110 0111 26778999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 017051 116 FYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.+||.. .|+...|+|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 999864 256778888775
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00049 Score=62.84 Aligned_cols=70 Identities=21% Similarity=0.194 Sum_probs=44.1
Q ss_pred CeEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CCceeecCCCCccC
Q 017051 136 PITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (378)
Q Consensus 136 ~~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 208 (378)
+.+++++||+|... ...++++.+.....+.++++||+++.+.... +. ...+..+.. .-.++.+.||||..
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSV--ET-VTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSST
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChH--HH-HHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 35699999998542 1234444444556788999999998665422 21 223333322 23589999999985
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0028 Score=47.89 Aligned_cols=81 Identities=17% Similarity=0.276 Sum_probs=49.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.|....+...+.++++|.|...... ..-.|+|.............. .. ...+++++|+|++.|.
T Consensus 10 ~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y~ 78 (109)
T 1x5x_A 10 MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKYK 78 (109)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEEE
T ss_pred CCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe---------CC--ccEEEECCCCCCCEEE
Confidence 4444446667799999999866432 223677766543211111000 11 2346789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 017051 117 YRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (378)
|||.. .|....++|.+.
T Consensus 79 frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 79 FKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEeCCCCcCCccCEEeEeCCC
Confidence 99864 255667788653
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0043 Score=48.16 Aligned_cols=76 Identities=14% Similarity=0.101 Sum_probs=47.4
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEecc---CCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTS---PGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
.....|..+.+...+.++++|.|.-..... .-.|+|... ....+...... ........+++++|+
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~--------~~~~~~~~~~v~~L~ 87 (124)
T 1wis_A 16 ELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL--------SNEPDARSMEVPDLN 87 (124)
T ss_dssp CCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE--------ESCTTCSEEEECSCC
T ss_pred CCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE--------ccCCCceEEEeCCCC
Confidence 344689999888778999999996543222 246777763 21112111100 012233467889999
Q ss_pred CCCEEEEEeCc
Q 017051 111 HDTVYFYRCGR 121 (378)
Q Consensus 111 p~t~Y~Y~v~~ 121 (378)
|++.|.|||..
T Consensus 88 p~t~Y~frV~A 98 (124)
T 1wis_A 88 PFTCYSFRMRQ 98 (124)
T ss_dssp TTSEECCCCEE
T ss_pred CCCEEEEEEEE
Confidence 99999999864
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0032 Score=47.88 Aligned_cols=81 Identities=11% Similarity=0.237 Sum_probs=52.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
..|..+++...+.+++.|+|...... ..-.|+|............ ... ...++|++|+|+|.|.+|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~--~~~~~i~~L~p~t~Y~~~ 86 (115)
T 1x5z_A 19 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEP--GTSYRLQGLKPNSLYYFR 86 (115)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECS--SSEEEEECCCTTCEEEEC
T ss_pred CCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----------cCC--CcEEEECCCCCCCeEEEE
Confidence 48888988877799999999877432 2235556554322111100 011 245678999999999999
Q ss_pred eCc--------cCceeEEECCCC
Q 017051 119 CGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 119 v~~--------~s~~~~F~t~p~ 133 (378)
|.. .|....|+|.+.
T Consensus 87 V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 87 LAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp EEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCcccCCCcCEEEecCCC
Confidence 864 256677888653
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0016 Score=49.36 Aligned_cols=78 Identities=18% Similarity=0.279 Sum_probs=49.8
Q ss_pred CCCceEEEEecCCCeEEEEE--EcCCCC---CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTW--ITDDES---SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+++...+.+++.|+| ...... ..-.|+|..... . ..+... ... ++|+||+|+|.|
T Consensus 11 ~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--------~-~~~~~~---~~~---~~i~~L~p~t~Y 75 (107)
T 1x5a_A 11 LSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--------E-WHQMVL---EPR---VLLTKLQPDTTY 75 (107)
T ss_dssp CCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--------E-EEEEES---SSE---EEEESCCSSCEE
T ss_pred CCCCceEEEecCCCEEEEEECCCCCCCCCCceEEEEEEEeCCC--------C-ceEEEe---cce---EEECCCCCCCEE
Confidence 35667777777799999999 654322 123566654410 0 011111 111 889999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 017051 116 FYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.+||.. .|+...|+|.+.
T Consensus 76 ~f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 76 IVRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEECCCccCCCCCCEEEEECCC
Confidence 999864 356778888775
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0013 Score=50.87 Aligned_cols=83 Identities=14% Similarity=0.259 Sum_probs=54.4
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...+++++.|+|..... . ..-.|+|........... .......++|++|+|
T Consensus 27 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~i~~L~p 94 (124)
T 2ed9_A 27 VPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------------LEPNNLWYLFTGLEK 94 (124)
T ss_dssp CCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------------ECSSCSEEEEECCCS
T ss_pred CCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------------ecCCcCEEEEcCCCC
Confidence 3445788888887779999999987743 1 123566766543221110 112234567899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
+|.|.++|.. .|....|+|+.
T Consensus 95 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 95 GSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 9999999864 25667777764
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0029 Score=49.57 Aligned_cols=87 Identities=22% Similarity=0.207 Sum_probs=53.7
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcC--CCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITD--DESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~--~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.++..|..+++...+.+++.|+|... ..... -.|+|........... . ..........++|++|+|
T Consensus 17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-----~---~~~~~~~~~~~~i~~L~p 88 (134)
T 2edx_A 17 TPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH-----V---VDGISREHSSWDLVGLEK 88 (134)
T ss_dssp CCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE-----E---ECCCBTTCSEEEEESCCT
T ss_pred CCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE-----E---EEeeCCCccEEEeCCCCC
Confidence 34457888988877799999999977 22222 2455554432211000 0 001123345678899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
+|.|.+||.. .|....++|.+
T Consensus 89 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 89 WTEYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp TCEEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 9999999864 25566788854
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0042 Score=48.56 Aligned_cols=85 Identities=16% Similarity=0.280 Sum_probs=53.7
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC--CCCcEEE----EeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVE----YGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~--~~~~~v~----y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...+.+++.|+|..... ....... |...... .. .. .. ...+....++|++|+|
T Consensus 17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~-~~--~~-~~~~~~~~~~i~~L~p 86 (132)
T 1x5h_A 17 VPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SD-VT--ET-LVSGTQLSQLIEGLDR 86 (132)
T ss_dssp SCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EE-EE--CC-BCCTTCCEEEEECCCS
T ss_pred CCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------Cc-cE--EE-EeCCCccEEEeCCCCC
Confidence 3445788888887779999999998753 2222333 4332210 00 00 00 1233455678899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
+|.|.++|.. .|....|+|.+
T Consensus 87 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 87 GTEYNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp SCEEEEECEEEETTEEEEECCCEEEECCS
T ss_pred CCEEEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 9999999864 25667888866
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.005 Score=46.47 Aligned_cols=78 Identities=15% Similarity=0.170 Sum_probs=49.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++.-.+.++++++|.....+. .-.|+|..... .... ......++|+||+|||.|.
T Consensus 9 s~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~~-------------~~~~t~~~i~gL~PgT~Y~ 73 (104)
T 2dle_A 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSNL-------------NVSEPRAVIPGLRSSTFYN 73 (104)
T ss_dssp CBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEEE-------------EESSSEEECCSCCSSCEEE
T ss_pred CCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEEE-------------cCCCCEEEECCCCCCCEEE
Confidence 466777777777999999998664332 24566654321 0000 0112457899999999999
Q ss_pred EEeCcc-------CceeEEECCCC
Q 017051 117 YRCGRQ-------GPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~~-------s~~~~F~t~p~ 133 (378)
++|... +....++|.|.
T Consensus 74 ~~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 74 ITVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp EEEEEESSSCCCBCEEEEEECCCC
T ss_pred EEEEEEECCcccCCeeEEEEccCC
Confidence 998641 23455677653
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0042 Score=46.80 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=52.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+.+++.|+|.-.... ..-.|+|....+. .. .. ........++|+||+|+|.|.++|
T Consensus 9 ~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~~-~~-------~~----~~~~~~ts~~l~~L~p~t~Y~~~V 76 (105)
T 2cum_A 9 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQ-------EI----LLPGGITSHQLLGLFPSTSYNARL 76 (105)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EE-------EE----EECSSCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCCc-eE-------EE----EECCCccEEEECCCCCCCEEEEEE
Confidence 47888888877899999999765422 2235777654321 10 00 112234467899999999999998
Q ss_pred Ccc-------CceeEEECCC
Q 017051 120 GRQ-------GPEFEFKTPP 132 (378)
Q Consensus 120 ~~~-------s~~~~F~t~p 132 (378)
... .....|+|..
T Consensus 77 ~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 77 QAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEBTTBCCCCEEEEEECCC
T ss_pred EEEeCCcccCCEEEEEEeCC
Confidence 641 2345677754
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0034 Score=46.72 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=46.0
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC-CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS-PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
.|..+.++..++++++|+|......- .-.|+|.......... .. ..++..-.++|+||+|+|.|.++|.
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~------~~~~~~t~~~l~gL~P~t~Y~~~V~ 73 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAI----NL------TVPGSERSYDLTGLKPGTEYTVSIY 73 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCE----EE------EEETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceE----EE------EcCCCcCEEEECCCCCCCEEEEEEE
Confidence 68888888778999999998764322 2367787654211100 00 0112234678999999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 74 A 74 (98)
T 3tes_A 74 G 74 (98)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0033 Score=49.06 Aligned_cols=85 Identities=12% Similarity=0.179 Sum_probs=54.6
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
...|..+++...+.+++.|+|....... .-.|+|............ . ........++|++|+|+|.|
T Consensus 28 P~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y 98 (130)
T 1wfo_A 28 PGPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV-E--------VLAPSARQYTATGLKPESVY 98 (130)
T ss_dssp CCCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE-E--------EECTTCCEEEEESCCSSSEE
T ss_pred CCCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE-E--------EeCCCceEEEEcCCCCCCEE
Confidence 3588888888788999999998764322 235667665422110000 0 11223456778999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 017051 116 FYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.+||.. .|....|+|.+.
T Consensus 99 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 99 LFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEEeCCcCCCCcccEEEecCCC
Confidence 999864 145667888653
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0052 Score=45.41 Aligned_cols=71 Identities=14% Similarity=0.192 Sum_probs=46.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+++++.|+|...... ..-.|+|....+...... . ........++|++|+|++.|.++|
T Consensus 3 ~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~----~------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (98)
T 3teu_A 3 DAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKE----L------TVPPSSTSVTITGLTPGVEYVVSV 72 (98)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEE----E------EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEE----E------EcCCCcCEEEecCCCCCCEEEEEE
Confidence 37888888877899999999876422 234677875432211110 0 011234457799999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 73 ~A 74 (98)
T 3teu_A 73 YA 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0034 Score=47.78 Aligned_cols=80 Identities=23% Similarity=0.293 Sum_probs=52.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+.-.+++++.|+|.-.... ..-.|+|....+...... ..++....++|++|+|+|.|..+|
T Consensus 9 ~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~-----------~v~~~~t~~~l~~L~p~T~Y~v~V 77 (108)
T 2ee3_A 9 APPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQT-----------EAPGNATSAMLGPLSSSTTYTVRV 77 (108)
T ss_dssp CCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCE-----------EEETTCCEEEECSCCSSCEEEEEE
T ss_pred CCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEE-----------EcCCCcCEEEcCCCCCCCEEEEEE
Confidence 58899999888899999999765322 334778876543211110 011122457899999999999998
Q ss_pred Ccc-----C--ceeEEECC
Q 017051 120 GRQ-----G--PEFEFKTP 131 (378)
Q Consensus 120 ~~~-----s--~~~~F~t~ 131 (378)
..- | ....|+|.
T Consensus 78 ~A~~~~g~s~p~~~~~~T~ 96 (108)
T 2ee3_A 78 TCLYPGGGSSTLTGRVTTK 96 (108)
T ss_dssp EEECTTSCEEEEEEEEECC
T ss_pred EEEeCCCcCCCccCEEEeC
Confidence 641 1 12368885
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0017 Score=49.93 Aligned_cols=87 Identities=20% Similarity=0.274 Sum_probs=52.8
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
.+...|..+.+...+.+++.|+|......... .|+|.......... +.. ........++|++|+|+|
T Consensus 17 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-------~~~--~~~~~~~~~~i~~L~p~t 87 (121)
T 2dlh_A 17 APSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNN-------WMK--HNVADSQITTIGNLVPQK 87 (121)
T ss_dssp CCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTT-------SCC--CCCSSCSEECCBSCCSSC
T ss_pred CCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccc-------cEE--EecCCceEEEecCCCCCC
Confidence 34458888887766799999999987433322 34444332211000 000 011123356789999999
Q ss_pred EEEEEeCc--------cCceeEEECCCC
Q 017051 114 VYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.|.+||.. .|+...|+|.+.
T Consensus 88 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 88 TYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred EEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 99999864 256678888653
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0057 Score=47.40 Aligned_cols=83 Identities=16% Similarity=0.092 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC-C----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS-P----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.|..+.+...+.+ +.|+|.-..... . -.|+|.......+.... ... ........++|++|+|+|.|.
T Consensus 10 ~P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~------~~~-~~~~~~~~~~i~~L~p~t~Y~ 81 (122)
T 2e3v_A 10 SPSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW------YDA-KEASMEGIVTIVGLKPETTYA 81 (122)
T ss_dssp CCEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE------EEH-HHHHTTTEEEECSCCTTCEEE
T ss_pred CCCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce------eee-eecCccceEEeCCCCCCCEEE
Confidence 3888877766677 999999764322 1 24666655432121110 000 011123356789999999999
Q ss_pred EEeCc--------cCceeEEECCC
Q 017051 117 YRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (378)
+||.. .|....|+|.|
T Consensus 82 ~rV~A~n~~G~g~~S~~~~~~t~~ 105 (122)
T 2e3v_A 82 VRLAALNGKGLGEISAASEFKTQP 105 (122)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCccCCCcccccccccC
Confidence 99864 25566676655
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=60.80 Aligned_cols=69 Identities=17% Similarity=0.117 Sum_probs=43.4
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhh--hhCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~~ 208 (378)
.++.++||+|... ...++++.+.....+-+|++||+++.+.... +. ...+..+ ...-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ET-ICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--HH-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChH--HH-HHHHHHhhhhcCCceEEecCCchHh
Confidence 4689999998552 1234445544455688999999998665422 22 2222222 2124589999999973
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0038 Score=59.86 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=79.0
Q ss_pred CCCeEEEEEcccCCCCCh---HH----HHHHhh-----------cCCCcEEEeccccccccch-----------------
Q 017051 134 QFPITFAVAGDLGQTGWT---KS----TLDHIG-----------QCKYDVHLLPGDLSYADYM----------------- 178 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~----~~~~i~-----------~~~~d~vi~~GDl~~~~~~----------------- 178 (378)
..+..++++||+|.+... .. .++.+. ..++..+|++||++...+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 456789999999987652 11 222221 3468899999999975322
Q ss_pred --hhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccchhhhchhcccCCCC-CCCCCCCceEEEEeCCEEEEEEcCcC
Q 017051 179 --QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYA 255 (378)
Q Consensus 179 --~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ysf~~g~v~fi~ldt~~ 255 (378)
....+.+.+++..+...+|+..+|||||-......+..+.. ..|..... ..-..-..-|.|++++++|++.....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqn 355 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQN 355 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCC
Confidence 02234455667777888999999999998543221111110 00100000 00001134456899999999886521
Q ss_pred -----CCCCcHHHHHHHHHHhhh
Q 017051 256 -----DYDEYSDQYRWLKDDLSK 273 (378)
Q Consensus 256 -----~~~~~~~Q~~WL~~~L~~ 273 (378)
.+.....-++.|+..|+.
T Consensus 356 idDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 356 VSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHB
T ss_pred HHHHHhcCCCCCHHHHHHHHHHH
Confidence 111223456788888876
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.005 Score=47.12 Aligned_cols=80 Identities=11% Similarity=0.049 Sum_probs=50.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+++...+.+++.|+|.-.... ..-.|+|........ . . ...+....++|+||+|+|.|.++|
T Consensus 9 ~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~-~-------~----~v~~~~t~~~l~~L~P~t~Y~~~V 76 (115)
T 2cuh_A 9 DGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-Q-------A----ETPGSAVDYPLHDLVLHTNYTATV 76 (115)
T ss_dssp SSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-E-------E----EEETTCSEEEECSCCSSSEEEEEE
T ss_pred CCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCCcE-E-------E----EECCCccEEEEeCCCCCCEEEEEE
Confidence 37888877767799999999865322 223577765432111 0 0 011223467899999999999998
Q ss_pred Ccc-------CceeEEECCC
Q 017051 120 GRQ-------GPEFEFKTPP 132 (378)
Q Consensus 120 ~~~-------s~~~~F~t~p 132 (378)
... .....|+|.+
T Consensus 77 ~A~~~~~~s~~~~~~~~T~~ 96 (115)
T 2cuh_A 77 RGLRGPNLTSPASITFTTGL 96 (115)
T ss_dssp EEEETTEECCCEEEEEESCC
T ss_pred EEEeCCCcCCCEEEEEEeCC
Confidence 641 2345677764
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0027 Score=48.69 Aligned_cols=79 Identities=14% Similarity=0.179 Sum_probs=48.8
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCe--eEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNC--GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
....|.+++++-.+.++++|+|...... ..-.|+|....+.... ...+..... ..++....++|+||+|||.|
T Consensus 8 ~pp~p~~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~----~v~~~~t~~~l~gL~PgT~Y 83 (112)
T 2cui_A 8 SRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL----MVPGTRHSAVLRDLRSGTLY 83 (112)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE----EEETTCCEEEECSCCTTCEE
T ss_pred CCCCCCceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEE----EcCCCcCEEEeCCCCCCCEE
Confidence 3457888989988899999999865322 3457888765431000 000000000 11222347889999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.++|..
T Consensus 84 ~~~V~A 89 (112)
T 2cui_A 84 SLTLYG 89 (112)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0058 Score=47.78 Aligned_cols=81 Identities=22% Similarity=0.302 Sum_probs=51.1
Q ss_pred CCCc-eEEEEecCCCeEEEEEEcCCCCC-Cc-EEEEeccCCC-----------CCeeEEeeeeEEeeeeeccCeEEEEEE
Q 017051 41 SHPQ-QVHISLAGDSHMRVTWITDDESS-PS-VVEYGTSPGG-----------YNCGAEGESTSYRYLFYRSGKIHHTVI 106 (378)
Q Consensus 41 ~~p~-~v~l~~~~~~~~~i~W~t~~~~~-~~-~v~y~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~h~~~l 106 (378)
..|. .+++...+.+++++.|....... .. .++|...... .+.... ... ....++
T Consensus 17 ~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~----------~~~--~~~~~v 84 (127)
T 2dmk_A 17 NPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVP----------NIK--QNHYTV 84 (127)
T ss_dssp CCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEE----------EEC--SSEEEE
T ss_pred cCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEee----------ccc--CCeEEE
Confidence 4787 77777778999999999875432 22 6778652110 011110 001 124568
Q ss_pred CCCCCCCEEEEEeCc-------cCceeEEECCCC
Q 017051 107 GPLEHDTVYFYRCGR-------QGPEFEFKTPPA 133 (378)
Q Consensus 107 ~~L~p~t~Y~Y~v~~-------~s~~~~F~t~p~ 133 (378)
+||+|++.|.|||.. .|....++|++.
T Consensus 85 ~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 85 HGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp ESCCSSCEEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 899999999999964 245667788763
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0037 Score=46.71 Aligned_cols=71 Identities=15% Similarity=0.173 Sum_probs=46.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCC---CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDE---SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
..|..+++...+.+++.+.|..... ...-.|+|....+..... . .. .++....++|+||+||+.|.+
T Consensus 6 ~~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~---~-~~------v~~~~t~~~l~~L~p~t~Y~~ 75 (101)
T 3k2m_C 6 SVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ---E-FT------VPYSSSTATISGLSPGVDYTI 75 (101)
T ss_dssp BSSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE---E-EE------EETTCCEEEECSCCTTCEEEE
T ss_pred CCCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE---E-EE------cCCCccEEEECCCCCCCEEEE
Confidence 3788888887789999999987641 122367787654321100 0 00 111234678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 76 ~V~A 79 (101)
T 3k2m_C 76 TVYA 79 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0071 Score=51.34 Aligned_cols=82 Identities=16% Similarity=0.128 Sum_probs=52.5
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCC--------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDE--------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
...|..+.+...++++++|+|.-... ...-.|+|+........... .......++|++|+|
T Consensus 5 ~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p 73 (211)
T 3p4l_A 5 MMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLKP 73 (211)
T ss_dssp CCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-----------EEESSSEEEECSCCT
T ss_pred CCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-----------eCCCceEEEecCcCC
Confidence 45899998888889999999997421 12246777665432111110 011234567899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
+|.|.++|.. .|....++|.+
T Consensus 74 ~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 74 NTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp TCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 9999999864 24567788854
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0016 Score=50.52 Aligned_cols=90 Identities=18% Similarity=0.215 Sum_probs=54.9
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC------CCCcEEEEeccCCCCCe---eEEeeeeEEeeeeeccCeEEEEEECC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNC---GAEGESTSYRYLFYRSGKIHHTVIGP 108 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~---~~~~~~~~~~~~~~~~~~~h~~~l~~ 108 (378)
.+...|..+++...+++++.|+|.-... ...-.|+|......... ........ ..+....++|++
T Consensus 13 ~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~ 86 (125)
T 1uen_A 13 LPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILT------FQGSKTHGMLPG 86 (125)
T ss_dssp CCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEE------EESSCSEEEEES
T ss_pred CCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEE------ecCCccEEEeCC
Confidence 4446888888887779999999987521 11235666655432210 00001111 112234678899
Q ss_pred CCCCCEEEEEeCc--------cCceeEEECCCC
Q 017051 109 LEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|+|+|.|.++|.. .|....|+|.+.
T Consensus 87 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 87 LEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp CCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 9999999999864 256677888653
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0074 Score=46.84 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=48.0
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
+...|..+.+...+.+++.|+|.-.... ..-.|+|....+..... . . ..++....++|+||+|||.|.+
T Consensus 28 p~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~---~-~------~v~~~~t~~~l~gL~P~t~Y~~ 97 (121)
T 2ocf_D 28 VSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ---E-F------TVPGSKSTATISGLKPGVDYTI 97 (121)
T ss_dssp -CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE---E-E------EEETTCCEEEECCCCTTCEEEE
T ss_pred CCCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE---E-E------EeCCCcCEEEeCCCCCCCEEEE
Confidence 4468999999888899999999776422 22467777654321100 0 0 0112234678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 98 ~V~A 101 (121)
T 2ocf_D 98 TVYA 101 (121)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.012 Score=45.17 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=40.4
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeee--eeccCeEEEEEECCCCCCCE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYL--FYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~l~~L~p~t~ 114 (378)
..|. +...+.+++++.|.-....+. -.|+|.................+... ....+....+++++|+|++.
T Consensus 7 ~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~ 83 (115)
T 2ic2_A 7 TPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHT 83 (115)
T ss_dssp CCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEE
T ss_pred CcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCE
Confidence 3554 566779999999997644333 25667665211111211111110000 00112345678999999999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.|||..
T Consensus 84 Y~FRV~A 90 (115)
T 2ic2_A 84 YRFRILA 90 (115)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.016 Score=41.78 Aligned_cols=66 Identities=18% Similarity=0.352 Sum_probs=42.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
..|..+.+...+++++.++|..... ......|....+. ... +. ... -..++++|+||+.|+|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~~--~~---------~~~--~~~~~~~L~~~t~Y~~~V~ 69 (88)
T 1k85_A 5 TAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-ALA--TT---------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-SEE--EE---------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEECC-EEE--ee---------cCC--CEEEeCCCCCCCEEEEEEE
Confidence 4788888887789999999987642 2234444432111 111 11 111 1356889999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 70 A 70 (88)
T 1k85_A 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0024 Score=48.05 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=46.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++.-.+++++.|+|...... ..-.|+|.......... . . ..++....++|+||+|+|.|.
T Consensus 9 ~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~---~-~------~v~~~~ts~~l~~L~p~t~Y~ 78 (103)
T 3t04_D 9 SVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ---E-F------TVPGYYSTATISGLKPGVDYT 78 (103)
T ss_dssp CCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE---E-E------EEETTCCEEEECSCCTTCCEE
T ss_pred CCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE---E-E------EcCCCcCEEEeCCCCCCCEEE
Confidence 47888888877899999999876421 22367787653211110 0 0 111224567899999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
++|..
T Consensus 79 ~~V~A 83 (103)
T 3t04_D 79 ITVYA 83 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.007 Score=46.46 Aligned_cols=72 Identities=18% Similarity=0.315 Sum_probs=47.9
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
...|..+.+...+++++.|+|...... ..-.|+|....+.... .... .++....++|+||+|||.|.++
T Consensus 4 P~~P~~L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~----~~~~------v~~~~ts~~l~gL~P~T~Y~v~ 73 (114)
T 3qwq_B 4 SDVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPV----QEFT------VPGPVHTATISGLKPGVDYTIT 73 (114)
T ss_dssp -CCCEEEEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCC----EEEE------EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCcc----EEEE------eCCCcCEEEeCCCCCCCEEEEE
Confidence 348889988878899999999876422 2346788765432110 0000 1122346789999999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 74 V~A 76 (114)
T 3qwq_B 74 VYA 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0068 Score=46.98 Aligned_cols=87 Identities=13% Similarity=0.140 Sum_probs=52.3
Q ss_pred CCCCCCceEEEE-ecCCCeEEEEEEcC--CCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 38 KPSSHPQQVHIS-LAGDSHMRVTWITD--DESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 38 ~~~~~p~~v~l~-~~~~~~~~i~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
.++..|..+++. ..+.+++.|+|.-. ...... .|+|....... ... +.. ........++|++|+
T Consensus 17 ~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~----~~~---~~~--~~~~~~~~~~l~~L~ 87 (124)
T 2dbj_A 17 APSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGI----SKE---LLE--EVGQNGSRARISVQV 87 (124)
T ss_dssp CCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTE----EEE---EEE--EEESTTSCEEEECCC
T ss_pred CCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCC----ccc---eEE--EeCCCcceEEecCCC
Confidence 455688888887 46689999999877 222222 34443221110 000 000 001122456789999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 017051 111 HDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|++.|.+||.. .|+...++|++.
T Consensus 88 p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 88 HNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred CCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999999864 266778888764
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0026 Score=58.43 Aligned_cols=71 Identities=18% Similarity=0.221 Sum_probs=43.0
Q ss_pred CCCeEEEEEcccCCCC-ChHHHHHHhhcCCC-cEEEeccccccccchhhhHHHHHHhhHhhh--hCCceeecCCCCcc
Q 017051 134 QFPITFAVAGDLGQTG-WTKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEK 207 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~-~~~~~~~~i~~~~~-d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~ 207 (378)
....+++++||+|... ...++++.+..... +.+|++||+++.+.... +. ...+..+. ..-.++.+.||||.
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~llrGNHE~ 135 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSC--EV-ALLFYCLKILHPNNFFLNRGNHES 135 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSS
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChH--HH-HHHHHHHhhhCCCcEEEecCchhh
Confidence 3568999999998653 12334444433333 46999999998765422 11 12222221 12458899999996
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0017 Score=58.80 Aligned_cols=69 Identities=17% Similarity=0.162 Sum_probs=42.7
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhh--hhCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l--~~~~P~~~v~GNHD~~ 208 (378)
.+++++||+|..-. ..++++.+.....+-++++||+++.+.... +. ...+..+ ...-.++.+.||||..
T Consensus 56 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 56 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--ET-ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--HH-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CCEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcH--HH-HHHHHHHHhhCCCcEEEEecCchhh
Confidence 35899999986521 233444444556678999999998765422 11 1222222 2223589999999973
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0053 Score=47.33 Aligned_cols=73 Identities=25% Similarity=0.258 Sum_probs=46.5
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCC-CCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPG-GYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
...|..+.+...+.++++|.|.-.... ..-.|+|..... ..+.... . ........++|++|+|++.
T Consensus 18 P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~-~--------~~~~~~~~~~v~~L~p~t~ 88 (121)
T 1x4z_A 18 PEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILAT-S--------AIPPSRLSVEITGLEKGIS 88 (121)
T ss_dssp CCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEE-E--------EECTTCCEEEEESCCTTCE
T ss_pred CccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEee-c--------ccCCCcCEEEECCCCCCCE
Confidence 347888888877899999999843221 223677776542 2221111 1 0122334567899999999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.|||..
T Consensus 89 Y~frV~A 95 (121)
T 1x4z_A 89 YKFRVRA 95 (121)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999964
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0061 Score=46.01 Aligned_cols=71 Identities=20% Similarity=0.164 Sum_probs=45.1
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.++++|.|....... .-.|+|............ .........++++|+|++.|
T Consensus 9 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~Y 78 (110)
T 2yuw_A 9 SPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN----------KDLIDKTKFTITGLPTDAKI 78 (110)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC----------SSCCCSSEEEECSCCTTCEE
T ss_pred CCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec----------cccCccCEEEECCCCCCCEE
Confidence 478888888778999999998764321 134666654322111110 01112345678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 79 ~frV~A 84 (110)
T 2yuw_A 79 FVRVKA 84 (110)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999874
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.005 Score=46.58 Aligned_cols=80 Identities=13% Similarity=0.107 Sum_probs=48.7
Q ss_pred CCCceEEEE-ecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 41 SHPQQVHIS-LAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 41 ~~p~~v~l~-~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
..|..+.+. ..+.+++.|.|...... ..-.|+|............ . +....++|++|+|++.
T Consensus 10 ~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~ 77 (110)
T 2crz_A 10 GPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGKT 77 (110)
T ss_dssp CCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTCE
T ss_pred CCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCCE
Confidence 367777663 34578999999654221 2246777654432222111 0 1123456889999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 017051 115 YFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (378)
|.|||.. .|+...++|.+
T Consensus 78 Y~frV~A~n~~G~g~~S~~~~~~T~~ 103 (110)
T 2crz_A 78 YSFRLRAANKMGFGPFSEKCDITTAP 103 (110)
T ss_dssp EEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCCCccccccCC
Confidence 9999864 25566777764
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0033 Score=48.42 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=45.4
Q ss_pred cCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCcc----
Q 017051 51 AGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ---- 122 (378)
Q Consensus 51 ~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~~---- 122 (378)
.+.++++|+|.-....+ .-.|+|+......+..... .++....++|.+|+||+.|.+||...
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G 88 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----------VQGNKDHIILEHLQWTMGYEVQITAANRLG 88 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----------EETTTCCEEECCCCTTCCEEEEEEEECTTS
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----------cCCCcCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 56999999997543222 2378888764332221110 11122356799999999999998641
Q ss_pred ---CceeEEECCCC
Q 017051 123 ---GPEFEFKTPPA 133 (378)
Q Consensus 123 ---s~~~~F~t~p~ 133 (378)
.....|+|.+.
T Consensus 89 ~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 89 YSEPTVYEFSMPPK 102 (114)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CcCCcCCEEEcCCC
Confidence 12467888654
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0042 Score=47.09 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=46.2
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
...|..+.+...+.++++|+|.-.... ..-.|+|.......+.... ........+++++|+|++.
T Consensus 9 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~ 78 (111)
T 1x5y_A 9 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN----------KEPVERCGFTVKDLPTGAR 78 (111)
T ss_dssp CCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS----------SSCBSSSEEEEECCCTTCC
T ss_pred CcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc----------ccCCcccEEEECCCCCCCE
Confidence 357888888878899999999975432 2235667654432111110 0111233567889999999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.|||..
T Consensus 79 Y~frV~A 85 (111)
T 1x5y_A 79 ILFRVVG 85 (111)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999974
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0021 Score=58.56 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=41.8
Q ss_pred CeEEEEEcccCCCC-ChHHHHHHhhcC-CCcEEEeccccccccchhhhHHHHHHhhHhhh--hCCceeecCCCCccC
Q 017051 136 PITFAVAGDLGQTG-WTKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (378)
Q Consensus 136 ~~~f~~~gD~~~~~-~~~~~~~~i~~~-~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 208 (378)
..+++++||+|... ...++++..... ..+.++++||+++.+.... +. ...+..+. ..-.++.+.||||..
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EV-ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HH-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEecCcccc
Confidence 57899999998652 122334433322 3356999999998765422 21 12222221 123588899999973
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0034 Score=48.07 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=45.6
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
.+...|....+...+.++++|+|..... ...-.|+|.......+..... ........+++||+||
T Consensus 9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~ 78 (112)
T 1bpv_A 9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTED 78 (112)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSS
T ss_pred CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeec----------ccCccCEEEECCCCCC
Confidence 3344666666666679999999984321 123578887754332221110 0111224578999999
Q ss_pred CEEEEEeCc
Q 017051 113 TVYFYRCGR 121 (378)
Q Consensus 113 t~Y~Y~v~~ 121 (378)
+.|.|||..
T Consensus 79 t~Y~frV~A 87 (112)
T 1bpv_A 79 AAYEFRVIA 87 (112)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.005 Score=45.56 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=46.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+++.-.+++++.|+|...... ..-.|+|....+..... .. ..++....++|+||+|+|.|.++|
T Consensus 6 ~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~----~~------~v~~~~t~~~l~~L~p~t~Y~v~V 75 (97)
T 3qht_C 6 SVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQ----EF------TVPGSSSTATISGLSPGVDYTITV 75 (97)
T ss_dssp CSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCE----EE------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccE----EE------EeCCCcCEEEeCCCCCCCEEEEEE
Confidence 47888888877899999999865322 22367787654321110 00 012224567899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 76 ~A 77 (97)
T 3qht_C 76 YA 77 (97)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0086 Score=45.52 Aligned_cols=83 Identities=13% Similarity=0.057 Sum_probs=52.4
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
+...|..+.+.. ..+++.+.|.-.... ..-.|+|+... ..+...... ......+.++.+|+||+.
T Consensus 7 p~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~-~~W~~~~~~---------~~~~~t~~~v~~L~pg~~ 75 (108)
T 1v5j_A 7 GLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGS-QGWEVLDPA---------VAGTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETT-CCCEEEEEE---------ECSSCCEEECCCCCTTSC
T ss_pred CCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCC-CCcEEeeee---------cCCCcCEEEeCCCCCCCE
Confidence 346888888864 467899999987532 23467888732 222221110 122334566899999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 017051 115 YFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (378)
|.|||.. .|+...++|..
T Consensus 76 Y~FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 76 YEFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EECCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEEEcCCCCcCCCCCEEEEeCC
Confidence 9999864 15556666654
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0098 Score=45.44 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=50.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+.+++.|.|......... .|+|............. .... ..+++++|+|++.|.
T Consensus 19 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~--~~~~v~~L~p~t~Y~ 87 (118)
T 1x3d_A 19 DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY---------MGSQ--KQFKITKLSPAMGCK 87 (118)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE---------EESC--SEEEEESCCTTCEEE
T ss_pred cCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee---------ccCC--cEEEeCCCCCCCEEE
Confidence 46777777777799999999886533322 45555443211111100 0111 345789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 017051 117 YRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (378)
|||.. .|+...++|.+.
T Consensus 88 frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 88 FRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp EECCEEESSCBCCCCCCEEEECSCC
T ss_pred EEEEEEECCCCCCCccCEEEEcCCC
Confidence 99864 255666777653
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.006 Score=47.36 Aligned_cols=31 Identities=26% Similarity=0.331 Sum_probs=24.6
Q ss_pred EEEECCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 017051 103 HTVIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 103 ~~~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.+++++|+|+|.|.|||.. .|+...++|.+.
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCC
Confidence 3678999999999999874 256677888763
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.025 Score=43.81 Aligned_cols=82 Identities=13% Similarity=0.185 Sum_probs=48.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCC-CCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.+++.|.|.-...... -.|+|...... ........ . .... .+ .+.+|+|++.|
T Consensus 18 ~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~------~-~~~~-~~--~i~~L~p~t~Y 87 (127)
T 1uey_A 18 NPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTE------V-SGTQ-TT--AQLNLSPYVNY 87 (127)
T ss_dssp CCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEE------E-ESSC-CE--EEECCCTTCEE
T ss_pred cCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEee------e-CCCc-eE--EEecCCCCCEE
Confidence 4889898887789999999996532222 34566554321 11111100 0 0111 12 35699999999
Q ss_pred EEEeCc--------cCce-eEEECCC
Q 017051 116 FYRCGR--------QGPE-FEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~--------~s~~-~~F~t~p 132 (378)
.|||.. .|.. ..|+|.+
T Consensus 88 ~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 88 SFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp CCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EEEEEEEeCCccCCccccccceEcCC
Confidence 999864 1333 4677754
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0036 Score=45.94 Aligned_cols=71 Identities=13% Similarity=0.231 Sum_probs=45.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+++...+++++.|+|.-.... ..-.|+|....+. ...... ...+....++|+||+|||.|.++|
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~V 72 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFP---APDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECC---CCCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEe---cCCCCccEEEeCCCCCCCEEEEEE
Confidence 36778888877899999999655321 2346777654321 000000 112234577899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 73 ~A 74 (94)
T 1j8k_A 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0029 Score=61.57 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=42.7
Q ss_pred CCeEEEEEcccCCCC-ChHHHHHHhhcCC-CcEEEeccccccccchhhhHHHHHHhhH-hhhhCCceeecCCCCcc
Q 017051 135 FPITFAVAGDLGQTG-WTKSTLDHIGQCK-YDVHLLPGDLSYADYMQHRWDTFGELVQ-PLASARPWMVTQGNHEK 207 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~-~~~~~~~~i~~~~-~d~vi~~GDl~~~~~~~~~~~~~~~~~~-~l~~~~P~~~v~GNHD~ 207 (378)
...+++++||+|... ...++++.+.... .|.+|++||+++.+.... +.+...+. ++.....++.++||||.
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~--e~~~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVILTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchH--HHHHHHHHHHhhCCCceEeecCCccH
Confidence 357899999998552 1233444443333 356999999998665321 22111111 12223578999999996
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0028 Score=58.66 Aligned_cols=69 Identities=19% Similarity=0.176 Sum_probs=42.8
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhh--hCCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~--~~~P~~~v~GNHD~~ 208 (378)
.+++++||+|... ...++++.......+-++++||+++.+.... +. ...+..+. ..-.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--Ev-l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 4589999998653 1233444444556788999999998765422 11 12222222 123588999999973
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0067 Score=48.26 Aligned_cols=75 Identities=12% Similarity=0.064 Sum_probs=45.7
Q ss_pred EEecCCCeEEEEEEcCCCC-C------------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 48 ISLAGDSHMRVTWITDDES-S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~-~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
+...++++++++|.-.... . .-+|+|..+........ . ..+-...++|+||+|+|.
T Consensus 26 v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~-----~------~~g~~ts~~v~~L~P~T~ 94 (137)
T 1wk0_A 26 ASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKS-----V------YVGEETNITLNDLKPAMD 94 (137)
T ss_dssp EESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEE-----E------EEESCSEEEECSCCTTCE
T ss_pred EEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEE-----E------EecCccEEEEcCCCCCCE
Confidence 5666799999999875432 1 11244433321111100 0 011234677999999999
Q ss_pred EEEEeCc--------cCceeEEECCCC
Q 017051 115 YFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|.+||.. .|....|+|++.
T Consensus 95 Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 95 YHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp ECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 9999964 267778999764
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.026 Score=42.56 Aligned_cols=74 Identities=14% Similarity=0.062 Sum_probs=48.6
Q ss_pred CCCCCCCCceEEEEecC--CCeEEEEEEcCCC---C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEE
Q 017051 36 DPKPSSHPQQVHISLAG--DSHMRVTWITDDE---S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (378)
Q Consensus 36 ~~~~~~~p~~v~l~~~~--~~~~~i~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l 106 (378)
+......|..+++.... .+++.|+|..... + -.-.|+|............. .. ...+.|
T Consensus 4 ~ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~~--~~~~~l 71 (109)
T 1uc6_A 4 GSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------SN--GTAHTI 71 (109)
T ss_dssp TSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------SS--CSEEEE
T ss_pred CEEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec----------cc--CCEEEE
Confidence 33445589999888643 6899999998642 1 23577888765432221110 11 135678
Q ss_pred CCCCCCCEEEEEeCc
Q 017051 107 GPLEHDTVYFYRCGR 121 (378)
Q Consensus 107 ~~L~p~t~Y~Y~v~~ 121 (378)
.+|+||+.|.+||..
T Consensus 72 ~~L~p~t~Y~~~VRa 86 (109)
T 1uc6_A 72 TDAYAGKEYIIQVAA 86 (109)
T ss_dssp TTCCSSSCEEEEEEC
T ss_pred eCCCCCCEEEEEEEE
Confidence 999999999999874
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.015 Score=48.13 Aligned_cols=82 Identities=17% Similarity=0.117 Sum_probs=50.4
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
...|..+.+...+.+++.|+|.-.... ..-.|+|........... ...+....++|+||+||+.|.++
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~ 163 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVV-----------TVDGSKTRTKLVKLVPGVDYNVN 163 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEE-----------EEETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEE-----------EcCCCcCEEEEcCCCCCCEEEEE
Confidence 346778877766789999999865322 234677766543211110 01122345779999999999999
Q ss_pred eCcc-----C--ceeEEECCC
Q 017051 119 CGRQ-----G--PEFEFKTPP 132 (378)
Q Consensus 119 v~~~-----s--~~~~F~t~p 132 (378)
|... | ....|+|.|
T Consensus 164 V~A~~~~g~s~p~~~~~~T~p 184 (186)
T 1qr4_A 164 IISVKGFEESEPISGILKTAL 184 (186)
T ss_dssp EEEEETTEECCCEEEEEEC--
T ss_pred EEEEcCCCcCcCEEEEEEecC
Confidence 8641 2 234677765
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0099 Score=45.38 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=44.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
..|..+.+...+.+++.|+|......+ .-.|+|........... . ........++|++|+|++.|.+
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~-------~---~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 19 DTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRL-------N---IPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp CCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEE-------E---ESCTTCCEEEEESCCTTCEEEE
T ss_pred CCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEE-------E---cCCCCcCEEEeCCCCCCCEEEE
Confidence 478888777667999999998764432 12455655432111100 0 1112234577899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 89 ~V~A 92 (118)
T 2yrz_A 89 RVRA 92 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.029 Score=48.42 Aligned_cols=83 Identities=13% Similarity=0.112 Sum_probs=54.1
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
+...|..+.+...++++++|+|.-.... ..-.|+|............ .......++|++|+|+|.|.+
T Consensus 5 p~~~P~~l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 73 (234)
T 3f7q_A 5 DLGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHL-----------LDSKVPSVELTNLYPYCDYEM 73 (234)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEE-----------EEESSSEEEECSCCTTCEEEE
T ss_pred CCCCCcceEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEE-----------EcCCccEEEECCCCCCCEEEE
Confidence 3458999999888899999999876322 2346777765432211110 001223467899999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 017051 118 RCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 118 ~v~~--------~s~~~~F~t~p 132 (378)
+|.. .+....++|..
T Consensus 74 ~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 74 KVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEeCCCcCCCCCeEEEEcCC
Confidence 9863 24566787753
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.013 Score=44.88 Aligned_cols=79 Identities=18% Similarity=0.222 Sum_probs=47.5
Q ss_pred CCceEEEE-ecCCCeEEEEEEcCCCC-----CCcEEEEeccCCC-CCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 42 HPQQVHIS-LAGDSHMRVTWITDDES-----SPSVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 42 ~p~~v~l~-~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
.|....+. ..+.+++.|+|...... ..-.|+|...... ...... .+.....++++|+|++.
T Consensus 20 ~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~------------~~~~~~~~v~~L~p~t~ 87 (120)
T 2crm_A 20 IPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY------------SGATREHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE------------CSSCSEEEECSCCTTSC
T ss_pred CCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE------------eccccEEEECCCCCCCE
Confidence 55555555 45589999999865432 2235666655431 111110 11133467899999999
Q ss_pred EEEEeCc--------cCceeEEECCC
Q 017051 115 YFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~p 132 (378)
|.|||.. .|+...++|.+
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCC
Confidence 9999864 24556666654
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0024 Score=48.56 Aligned_cols=71 Identities=14% Similarity=0.182 Sum_probs=43.5
Q ss_pred cCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc-----
Q 017051 51 AGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR----- 121 (378)
Q Consensus 51 ~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~----- 121 (378)
.+.++++|.|.-.... ..-.|+|............ .. .....+|++|+|++.|.|||..
T Consensus 22 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~--~~~~~~v~~L~p~t~Y~frV~A~n~~G 89 (110)
T 2db8_A 22 THNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY----------VG--KETMCTVDGLHFNSTYNARVKAFNKTG 89 (110)
T ss_dssp CSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE----------EE--SCSCEEEECCCSSSCCEEEEEEECSSC
T ss_pred cCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE----------eC--CcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence 3578999999876432 2235777664321111110 00 1223568899999999999864
Q ss_pred ---cCceeEEECCCC
Q 017051 122 ---QGPEFEFKTPPA 133 (378)
Q Consensus 122 ---~s~~~~F~t~p~ 133 (378)
.|+...++|.+.
T Consensus 90 ~s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 90 VSPYSKTLVLQTSEG 104 (110)
T ss_dssp BCCCCSCEECCCCCC
T ss_pred CCCCCCCEEEEcCCC
Confidence 256677888654
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0036 Score=60.45 Aligned_cols=69 Identities=19% Similarity=0.219 Sum_probs=41.3
Q ss_pred eEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CCceeecCCCCccC
Q 017051 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P~~~v~GNHD~~ 208 (378)
.+++++||+|.... ..++++.......+-+|++||+++.+.... +. ...+..+.. .-.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~--Ev-l~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHH--HH-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHH--HH-HHHHHHHhhhCCCeEEEecCCccHH
Confidence 46899999985421 223333222345688999999998765422 11 122222221 23488999999973
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.018 Score=44.55 Aligned_cols=79 Identities=15% Similarity=0.185 Sum_probs=47.8
Q ss_pred eEEEEec---CCCeEEEEEEcCCCCC---CcEEEEeccCCC---CCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 45 QVHISLA---GDSHMRVTWITDDESS---PSVVEYGTSPGG---YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 45 ~v~l~~~---~~~~~~i~W~t~~~~~---~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
+|+|-.. +++++.|+|.-..... .-.|.|+..... ..... .. ...+....++|+||+|+|.|
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~-~~--------v~~~~~~~~~l~~L~p~T~Y 88 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQN-LD--------AKVPTERSAVLVNLKKGVTY 88 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEE-EE--------CCCTTCCEEEEESCCSSEEE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEE-EE--------ecCCCcCEEEECCCCCCCEE
Confidence 4555333 4899999999642211 237888876531 11110 00 11223456789999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 017051 116 FYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (378)
.++|.. .|+...|+|+.
T Consensus 89 ~~~V~A~n~~G~Gp~S~~v~~~T~e 113 (120)
T 1ujt_A 89 EIKVRPYFNEFQGMDSESKTVRTTE 113 (120)
T ss_dssp EEEEEEESSSCCCCCCCCEEEEECS
T ss_pred EEEEEEECCCccCCCCCCEEEECCC
Confidence 999853 25667777764
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.02 Score=47.38 Aligned_cols=87 Identities=13% Similarity=0.159 Sum_probs=53.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+++++.|+|.-.... ..-.|+|....+. ... . ........++|++|+|++.|.++|
T Consensus 8 ~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~-~~~-----~------~~~~~~~~~~i~~L~p~t~Y~~~V 75 (186)
T 1qr4_A 8 DNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGK-KNE-----M------EIPVDSTSFILRGLDAGTEYTISL 75 (186)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCC-EEE-----E------EECTTCSEEEEESCCSSCEEEEEE
T ss_pred cCCCceEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCCC-eeE-----E------ECCCCCCEEEECCCCCCCEEEEEE
Confidence 47889988877899999999875332 3346777743221 000 0 011223345789999999999998
Q ss_pred Ccc-----C--ceeEEECCCC-CCCeEE
Q 017051 120 GRQ-----G--PEFEFKTPPA-QFPITF 139 (378)
Q Consensus 120 ~~~-----s--~~~~F~t~p~-~~~~~f 139 (378)
... | ....++|+|. ...+++
T Consensus 76 ~a~~~~~~s~~~~~~~~t~p~~P~~l~~ 103 (186)
T 1qr4_A 76 VAEKGRHKSKPTTIKGSTVVGSPKGISF 103 (186)
T ss_dssp EEESSSCBCCCEEEEEECCCCCCSCEEE
T ss_pred EEEcCCccCCCEEEEEECCCCCCCccEE
Confidence 641 2 2456677654 234444
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.02 Score=49.25 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=58.5
Q ss_pred CCCCCCCCCCceEEEEecCCCeEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEEC
Q 017051 34 PWDPKPSSHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 34 ~~~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
|++......|..+++...+.+++.|+|...... -.-.|+|...... ....... ......+.+.|.
T Consensus 100 P~~~vk~~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--------~~~~~~~~~~l~ 170 (214)
T 2b5i_B 100 PFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--------TLKQKQEWICLE 170 (214)
T ss_dssp GGGSBCCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--------EECSCCCEEEEC
T ss_pred cccccCCCCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--------eecccceEEEec
Confidence 434445578999999877778999999987532 1346778765431 1111000 011224467789
Q ss_pred CCCCCCEEEEEeCc------------cCceeEEECCCC
Q 017051 108 PLEHDTVYFYRCGR------------QGPEFEFKTPPA 133 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~------------~s~~~~F~t~p~ 133 (378)
+|+|||.|..||.. +|....|+|.+.
T Consensus 171 ~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 171 TLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp SCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred cCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 99999999999863 256678998774
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.032 Score=46.24 Aligned_cols=70 Identities=14% Similarity=0.189 Sum_probs=45.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+++...+.+++.|.|...... ..-.|+|.............. ......++++|+|++.|
T Consensus 7 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y 75 (197)
T 3lpw_A 7 GPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCSY 75 (197)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCEE
T ss_pred CCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCEE
Confidence 38888888877899999999986321 223677766543222111100 11234678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|+|..
T Consensus 76 ~~~V~a 81 (197)
T 3lpw_A 76 YFRVLA 81 (197)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.029 Score=41.80 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=43.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|. +.|...+.+++.|+|....... .-.|+|........... ........++|++|+|++.|.+
T Consensus 10 ~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 10 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----------DFGKDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----------EEETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----------EeCCCccEEEeCCCCCCCEEEE
Confidence 455 6677678999999999764322 23677765543221111 0112234567899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 78 ~V~A 81 (107)
T 2dn7_A 78 RLAA 81 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.21 E-value=0.013 Score=44.57 Aligned_cols=71 Identities=10% Similarity=0.202 Sum_probs=43.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+.+++.|.|....... .-.|+|............. .......+++++|+|++.|.
T Consensus 17 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y~ 86 (117)
T 1uem_A 17 GPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA----------NHVKTTLYTVRGLRPNTIYL 86 (117)
T ss_dssp BCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE----------EEECSSEEEECSCCTTCEEE
T ss_pred cCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc----------cccCcCEEEECCCCCCCEEE
Confidence 367888888778999999998654221 2356665542110000000 00112246789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
|||..
T Consensus 87 frV~A 91 (117)
T 1uem_A 87 FMVRA 91 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99974
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.028 Score=47.69 Aligned_cols=66 Identities=14% Similarity=0.250 Sum_probs=42.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
..|..++.+-.++++++++|..+.... ..+..|.... .-....+..+ ..+++||+|+|.|.|+
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~~~GI~gY~ly~~g~--~v~~v~~~~t-------------syt~~gLk~~TeYsF~ 216 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPETTEGLEGYILYKDGK--KVAEIGKDET-------------SYTFKKLNRHTIYNFK 216 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTEEEEEEEETTE--EEEEEETTCC-------------EEEECSCCTTCEEEEE
T ss_pred CCCCceEEEEccCCeEEEEecCCCCCCCceeEEEEeCCc--eeEEeeccce-------------EEEecCCCCCCEEEEE
Confidence 689999999889999999999885432 2333343321 0001111111 2347899999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 217 V~A 219 (238)
T 2w1n_A 217 IAA 219 (238)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.017 Score=48.98 Aligned_cols=83 Identities=14% Similarity=0.169 Sum_probs=50.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.+++.|+|..... ...-.|+|+........... . .........+|++|+|++.|
T Consensus 117 ~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~------~---~~~~~~~~~~i~~L~p~t~Y 187 (214)
T 2ibg_A 117 PVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA------T---IEGAHARSFKIAPLETATMY 187 (214)
T ss_dssp CCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE------E---EECTTCCEEEECSCCTTCEE
T ss_pred CCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEe------e---ccCCcceEEEeCCCCCCCEE
Confidence 3577776665668899999998731 12236777765431111100 0 01111234678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 017051 116 FYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (378)
.|||.. .|....++|..
T Consensus 188 ~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 188 EFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCcceEeeEecC
Confidence 999864 25566777753
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.029 Score=42.07 Aligned_cols=68 Identities=15% Similarity=0.194 Sum_probs=42.5
Q ss_pred CCCceEEEEec-CCCeEEEEEEcCCCCCCcEEEEeccCC--CCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 41 SHPQQVHISLA-GDSHMRVTWITDDESSPSVVEYGTSPG--GYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 41 ~~p~~v~l~~~-~~~~~~i~W~t~~~~~~~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
..|..+.++.. +.+++.++|.... .......|+.... .+...+.+. ... ..+.++|++|++|+|
T Consensus 6 ~aP~~l~a~~~~~~~~v~LsW~~~~-~~~~Y~VyR~~~~~~~~~~i~~~~--------~~t----sy~d~~l~~g~~Y~Y 72 (103)
T 3mpc_A 6 AFPTGLSAVLDSSGNTANLTWNAAP-GANSYNVKRSTKSGGPYTTIATNI--------TST----NYTDTGVATGTKYYY 72 (103)
T ss_dssp CCCEEEEEEECTTSCCEEEEEECCT-TCSEEEEEEESSTTCCCEEEEEEE--------CSS----EEEETTCCTTCCCEE
T ss_pred CCCceeEEEEeCCCCEEEEEEECCC-CCCEEEEEEecCCCCCcEEEeecC--------CCC----EEEECCCCCCCEEEE
Confidence 47888877765 4689999999864 3455555665432 222222111 011 123479999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 73 ~V~A 76 (103)
T 3mpc_A 73 VVSA 76 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.012 Score=45.16 Aligned_cols=70 Identities=14% Similarity=0.150 Sum_probs=46.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.+++.|.|...... ..-.|+|.......+.... .......+++++|+|++.|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~-----------~~~~~~~~~v~~L~p~t~Y 87 (120)
T 2yux_A 19 GPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI-----------EHYHRTSATITELVIGNEY 87 (120)
T ss_dssp CCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEE-----------SSCCSSCCEECCCCSSEEE
T ss_pred CcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEee-----------ecCCcCEEEECCCCCCCEE
Confidence 47888888777799999999875422 2246778765432222111 0112234578999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 88 ~frV~A 93 (120)
T 2yux_A 88 YFRVFS 93 (120)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 999975
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.017 Score=48.74 Aligned_cols=73 Identities=18% Similarity=0.174 Sum_probs=46.7
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
....|..+++...+.+++.++|...... ..-.|.|.......... . . ..++...+++|+||+|+|.|.+
T Consensus 103 ~~~~P~~l~v~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~---~-~------~v~~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 103 VSSVPTNLEVVAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQ---E-F------TVPYSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp -CCSSCCCEEEEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCE---E-E------EEETTCSEEEECSCCTTCEEEE
T ss_pred cCCCCcccEEEeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcce---E-E------EeCCCCCEEEeCCCCCCCEEEE
Confidence 3467888888877899999999765422 22367776654321000 0 0 0112235678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=95.94 E-value=0.032 Score=47.10 Aligned_cols=84 Identities=17% Similarity=0.083 Sum_probs=50.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+. +++|+|..... ...-.|+|+...........-. ....+.....+|++|+|+|.|
T Consensus 10 ~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~L~p~t~Y 81 (209)
T 2vkw_A 10 SSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-------AKEASMEGIVTIVGLKPETTY 81 (209)
T ss_dssp CCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEE-------HHHHHHHSEEEECCCCTTCEE
T ss_pred cCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEee-------ccCCCccceEEeCCCCCCCeE
Confidence 3688888876556 68999997632 1223577776543222111100 001112335678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 017051 116 FYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (378)
.|||.. .+....++|.+
T Consensus 82 ~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 82 AVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp EEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEcCCcccCCcccccccccC
Confidence 999864 24556677754
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.93 E-value=0.017 Score=44.12 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=43.2
Q ss_pred CCCCceE--EEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 40 SSHPQQV--HISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 40 ~~~p~~v--~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
...|..+ .+...+.+++.|+|.-...... -.|+|..... .+.... . ...+....++|++|+|++
T Consensus 18 P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~-~--------~~~~~~~~~~v~~L~p~t 87 (121)
T 1wf5_A 18 PHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNA-PWTVLL-A--------SVDPKATSVTVKGLVPAR 87 (121)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTC-CCEEEE-S--------SCCTTCCEEEEESCCTTC
T ss_pred CccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCC-CceEeE-c--------ccCCCccEEEECCcCCCC
Confidence 3467777 5665568999999976532222 3455554431 111110 0 112233457789999999
Q ss_pred EEEEEeCc
Q 017051 114 VYFYRCGR 121 (378)
Q Consensus 114 ~Y~Y~v~~ 121 (378)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1wf5_A 88 SYQFRLCA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999864
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.91 E-value=0.066 Score=47.33 Aligned_cols=95 Identities=13% Similarity=0.129 Sum_probs=58.7
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCC-CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDD-ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
...|..+.+...+.+++.|+|.-.. ....-.|+|+........ ... ........++|++|+|++.|.++
T Consensus 15 p~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~----~~~------~~~~~~~~~~i~~L~p~t~Y~~~ 84 (283)
T 1tdq_A 15 IDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGK----TTF------RLQPPLSQYSVQALRPGSRYEVS 84 (283)
T ss_dssp SCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCC----EEE------EECTTCSEEEECSCCTTCEEEEE
T ss_pred CCCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCc----EEE------EeCCCCCEEEecCCCCCCEEEEE
Confidence 3589999888788999999999875 223346777654322111 000 01223445678999999999999
Q ss_pred eCcc-------CceeEEECCCC-CCCeEEEEEcc
Q 017051 119 CGRQ-------GPEFEFKTPPA-QFPITFAVAGD 144 (378)
Q Consensus 119 v~~~-------s~~~~F~t~p~-~~~~~f~~~gD 144 (378)
|... .....|+|+|. ...+++...++
T Consensus 85 V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~ 118 (283)
T 1tdq_A 85 ISAVRGTNESDASSTQFTTEIDAPKNLRVGSRTA 118 (283)
T ss_dssp EEEEETTEECCCEEEEEECCCCCCEEEEEEEECS
T ss_pred EEEECCCCCCCCeeEEEECCCCCCCceEEEecCC
Confidence 8641 23456777664 23344444443
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.14 Score=45.06 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=48.5
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
...|..+.+...+.+++.|.|...... ..-.|+|....+....... .. ...+....++|++|+|++.|.++
T Consensus 105 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-------~~-~~~~~~~~~~i~~L~p~t~Y~~~ 176 (283)
T 1tdq_A 105 IDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVL-------VP-KGIGPTTKTTLTDLVPGTEYGVG 176 (283)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEE-------EE-CCSSSEEEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEE-------CC-CCCcccceEEEecCCCCCEEEEE
Confidence 457888888877899999999987422 3346777665432211110 00 11112567789999999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 177 V~A 179 (283)
T 1tdq_A 177 ISA 179 (283)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0048 Score=46.38 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=46.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+++...+.+++.|+|.-.... ..-.|+|......... ... ...+....++|+||+|+|.|.++|
T Consensus 9 ~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~----~~~------~v~~~~~~~~l~~L~p~t~Y~~~V 78 (105)
T 2ekj_A 9 SPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPE----KSV------SVPGARSHVTLPDLQAATKYRVLV 78 (105)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCC----CCB------CCBTTSSEEEECSCCSSCCCBCBB
T ss_pred CCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCcc----EEE------EeCCCcCEEEeCCCCCCCEEEEEE
Confidence 47899988877899999999887422 2235666554321100 000 112233567799999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 79 ~A 80 (105)
T 2ekj_A 79 SA 80 (105)
T ss_dssp CB
T ss_pred EE
Confidence 75
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.023 Score=48.18 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=45.7
Q ss_pred CCCCceEEEEec--CCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 40 SSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 40 ~~~p~~v~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
...|..+.+... +.+++.|+|....... .-.|+|.............. ........++|++|+|+|
T Consensus 104 p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 175 (215)
T 1bqu_A 104 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 175 (215)
T ss_dssp CCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSE
T ss_pred CCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCCC
Confidence 447888888754 5789999998664321 23667766542211111000 012233456799999999
Q ss_pred EEEEEeCc
Q 017051 114 VYFYRCGR 121 (378)
Q Consensus 114 ~Y~Y~v~~ 121 (378)
.|.+||..
T Consensus 176 ~Y~~~V~A 183 (215)
T 1bqu_A 176 EYVFRIRC 183 (215)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999863
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.033 Score=49.57 Aligned_cols=78 Identities=24% Similarity=0.362 Sum_probs=48.9
Q ss_pred CceEEEEecCCCeEEEEEEcC--C----CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 43 PQQVHISLAGDSHMRVTWITD--D----ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 43 p~~v~l~~~~~~~~~i~W~t~--~----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
|.++.+...+.+++.|+|.-. . ....-.|+|....+.. ... . ..+.....+|++|+||+.|.
T Consensus 200 ~p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~-----~------~~~~~~~~~~~~L~p~t~Y~ 267 (290)
T 3l5i_A 200 GPTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAV-----N------VDSSHTEYTLSSLTSDTLYM 267 (290)
T ss_dssp CCCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEE-----E------EETTCSEEEECSCCTTCEEE
T ss_pred CCeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEE-----E------eCCCceEEEeCCCCCCCEEE
Confidence 336767667789999999722 1 1122357776654321 110 0 11223356799999999999
Q ss_pred EEeCc-------cCceeEEECCC
Q 017051 117 YRCGR-------QGPEFEFKTPP 132 (378)
Q Consensus 117 Y~v~~-------~s~~~~F~t~p 132 (378)
++|.. .|....|+|++
T Consensus 268 ~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 268 VRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp EEEEEEETTEEEECCCEEEECCC
T ss_pred EEEEEEeCCCCCCCCceEeecCC
Confidence 99864 25678888875
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.047 Score=45.87 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=47.2
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCC--C----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDD--E----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...+.+++.|+|.... . ...-.|+|+............ .........+|++|+|
T Consensus 103 ~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p 173 (205)
T 1cfb_A 103 VPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN---------IFDWRQNNIVIADQPT 173 (205)
T ss_dssp CCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE---------ECCTTCCEEEECSCCS
T ss_pred CCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE---------ecCCCccEEEEcCCCC
Confidence 344578888888777899999998754 1 122366776655322111100 1111234567899999
Q ss_pred CCEEEEEeCc
Q 017051 112 DTVYFYRCGR 121 (378)
Q Consensus 112 ~t~Y~Y~v~~ 121 (378)
++.|.++|..
T Consensus 174 ~t~Y~~~V~A 183 (205)
T 1cfb_A 174 FVKYLIKVVA 183 (205)
T ss_dssp SCEEEEEEEE
T ss_pred CcEEEEEEEE
Confidence 9999999864
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.093 Score=44.29 Aligned_cols=82 Identities=10% Similarity=0.094 Sum_probs=52.7
Q ss_pred CCCCCceEEEEecC----CCeEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEE
Q 017051 39 PSSHPQQVHISLAG----DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (378)
Q Consensus 39 ~~~~p~~v~l~~~~----~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l 106 (378)
....|..+.+.... .+++.|+|....... .-.|+|+...+....... .......+|
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------------~~~~~~~~l 169 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKI 169 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------------EETCSEEEE
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------------ccCceEEEE
Confidence 45588888887643 589999999764322 235667665432221110 011235678
Q ss_pred CCCCCCCEEEEEeCc---------cCceeEEECCC
Q 017051 107 GPLEHDTVYFYRCGR---------QGPEFEFKTPP 132 (378)
Q Consensus 107 ~~L~p~t~Y~Y~v~~---------~s~~~~F~t~p 132 (378)
.+|+|++.|.+||.. +|+...|+|+.
T Consensus 170 ~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 170 LSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp CCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred eccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 999999999999863 35667888865
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.65 E-value=0.046 Score=46.14 Aligned_cols=87 Identities=22% Similarity=0.313 Sum_probs=52.1
Q ss_pred CCCCCCceEEEEecC--CCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...+ .+++.|+|.-..... .-.|+|............-. ...+....++|++|+|
T Consensus 104 ~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p 175 (211)
T 3p4l_A 104 VPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE--------PVVGNRLTHQIQELTL 175 (211)
T ss_dssp CCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE--------EEESSCSEEEECCCCT
T ss_pred CCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE--------EecCCeeEEEEcCCCC
Confidence 344588888888664 789999999764321 23566765543211100000 0112234567899999
Q ss_pred CCEEEEEeCc--------cCceeEEECCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
++.|.++|.. .|+...|+|..
T Consensus 176 ~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 176 DTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp TCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 9999999864 24555666543
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.026 Score=47.42 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=44.9
Q ss_pred CCceEEEEecC--CCeEEEEEEcCC--CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAG--DSHMRVTWITDD--ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~--~~~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|.++.++..+ ++++.|+|.... ....-.|+|........... .. ..+....++|+||+|++.|.+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~----~~------~~~~~~~~~i~~L~p~t~Y~~ 71 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE----AT------IPGHLNSYTIKGLKPGVVYEG 71 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEE----EE------ECTTCCEEEECSCCTTEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEE----Ee------cCCCccEEEecCCCCCCEEEE
Confidence 57788777655 899999999863 12334677876543211110 00 112233678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 72 ~V~a 75 (201)
T 2ha1_A 72 QLIS 75 (201)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.54 E-value=0.046 Score=41.60 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=44.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+.+++.|+|....... .-.|+|........... . ........++|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~----~------~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 1wfn_A 19 GPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVT----H------YLPNVTLEYRVTGLTALTTYT 88 (119)
T ss_dssp CCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCC----E------EECSSCCEEEEESCCTTCEEE
T ss_pred CCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEE----E------EeCCCceEEEEcCCCCCCEEE
Confidence 467788888777999999998764322 23566655432111000 0 112234567789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
+||..
T Consensus 89 ~~V~A 93 (119)
T 1wfn_A 89 IEVAA 93 (119)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.52 E-value=0.044 Score=41.79 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=44.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+ +++.|+|.-..... .-.|+|..... ..... .........+|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~-----------~~~~~~~~~~l~~L~p~t~Y~ 85 (116)
T 2edb_A 19 DQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV-----------RVDSKQRYYSIERLESSSHYV 85 (116)
T ss_dssp CCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE-----------EEETTCCEEEECSCCSSSBEE
T ss_pred CCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE-----------EeCCCeeEEEeCCCCCCCEEE
Confidence 388899888777 99999998764321 23566764221 11000 011223456799999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
++|..
T Consensus 86 ~~V~A 90 (116)
T 2edb_A 86 ISLKA 90 (116)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=95.48 E-value=0.042 Score=49.38 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=53.3
Q ss_pred CCCCCceEEEEec--CCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 39 PSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 39 ~~~~p~~v~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
....|..+.+... +.+++.|+|....... .-.|+|+......+...... .........+|++|+|+
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~--------~~~~~~~~~~l~~L~p~ 270 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPF 270 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCTT
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc--------cCCCceeEEEeCCCCCC
Confidence 4457888887754 4789999999764321 23677776543222111000 00222345679999999
Q ss_pred CEEEEEeCc-----------cCceeEEECCC
Q 017051 113 TVYFYRCGR-----------QGPEFEFKTPP 132 (378)
Q Consensus 113 t~Y~Y~v~~-----------~s~~~~F~t~p 132 (378)
|.|.+||.. +|+...|+|+.
T Consensus 271 t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 271 TEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp CEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 999999863 24566787764
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.065 Score=44.25 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=45.8
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
...|..+.+...+.+++.|+|....... .-.|+|............ . . .....++++|+|++.
T Consensus 103 p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t~ 170 (197)
T 3lpw_A 103 PLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-T---------V--KVTEATITGLIQGEE 170 (197)
T ss_dssp CCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-E---------E--SSSEEEECCCCTTCE
T ss_pred CCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-c---------c--cccEEEeCCcCCCCE
Confidence 3478888888778999999998754321 236667655432221111 0 0 123457899999999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.|+|..
T Consensus 171 Y~~~V~A 177 (197)
T 3lpw_A 171 YSFRVSA 177 (197)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.39 E-value=0.15 Score=45.27 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=56.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+.+++.|+|...... ..-.|+|....+...... ........++|++|+|++.|.++|
T Consensus 114 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~V 182 (290)
T 3r8q_A 114 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIYL 182 (290)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----------EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----------ecCCCccEEEECCCCCCCEEEEEE
Confidence 58888988877899999999986432 334677766543221110 011223346789999999999998
Q ss_pred Ccc-----C--ceeEEECCCC-CCCeEEEEE
Q 017051 120 GRQ-----G--PEFEFKTPPA-QFPITFAVA 142 (378)
Q Consensus 120 ~~~-----s--~~~~F~t~p~-~~~~~f~~~ 142 (378)
... | ....++|+|. ...+++...
T Consensus 183 ~A~n~~g~s~~~~~~~~t~p~~P~~l~~~~~ 213 (290)
T 3r8q_A 183 YTLNDNARSSPVVIDASTAIDAPSNLRFLAT 213 (290)
T ss_dssp EEEETTEECCCEEEEEECCCCCCEEEEEEEE
T ss_pred EEEeCCcccCCEEEEecCCCCCCCccEEEee
Confidence 641 2 2344566653 233444433
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.06 Score=45.33 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=45.9
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.|..+.+...+++++.|+|...... ..-.|+|............ ........++|++|+|++.|.++|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 94 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----------FVDSSVGYYTVTGLEPGIDYDISV 94 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE----------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE----------EcCCCccEEEeCCCCCCCEEEEEE
Confidence 6888888877899999999987521 1346777765432211110 011123356789999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 95 ~a 96 (203)
T 2gee_A 95 YT 96 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.074 Score=45.03 Aligned_cols=84 Identities=11% Similarity=0.124 Sum_probs=51.6
Q ss_pred CCCCCceEEEEec------CCCeEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeeeEEeeeeeccCeEEEEEEC
Q 017051 39 PSSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 39 ~~~~p~~v~l~~~------~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
....|..+.+... ..+++.|.|....... .-.|+|+ .........+. . ..+....++|.
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~-~---------~~~~~~~~~l~ 177 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF-H---------LPSSKDQFELC 177 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE-E---------EESCEEEEEEC
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe-c---------ccCcceEEEEc
Confidence 3457888776654 4788999998764321 3467787 44332222111 0 11124567899
Q ss_pred CCCCCCEEEEEeCc-----------cCceeEEECCC
Q 017051 108 PLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (378)
+|+|+|.|.+||.. +|+...|+|+.
T Consensus 178 ~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 178 GLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 99999999999863 24556677754
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.23 E-value=0.054 Score=45.60 Aligned_cols=70 Identities=20% Similarity=0.255 Sum_probs=46.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.|..+.+...+.+++.|+|..... ...-.|+|....+..... .. ...+....++|+||+|++.|.++|
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~------~~~~~~~~~~i~~L~p~t~Y~~~V 185 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA----EL------SISPSDNAVVLTNLLPGTEYVVSV 185 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE----EE------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccE----EE------EcCCCcCEEEECCCCCCCEEEEEE
Confidence 688888877779999999998742 123467777643221110 00 112234557789999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 186 ~A 187 (203)
T 2gee_A 186 SS 187 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=95.17 E-value=0.083 Score=46.97 Aligned_cols=73 Identities=10% Similarity=0.044 Sum_probs=49.1
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
....|..+.+...+++++.|+|...... ..-.|+|............ ........++|++|+|++.|.+
T Consensus 20 ~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 89 (290)
T 3r8q_A 20 AIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----------NLAPDSSSVVVSGLMVATKYEV 89 (290)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----------EECTTCCEEEECSCCSSCEEEE
T ss_pred CCCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----------EcCCCccEEEeCCCCCCCEEEE
Confidence 4458999988888899999999987422 2346777765422111100 0112244677899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 90 ~V~a 93 (290)
T 3r8q_A 90 SVYA 93 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=95.16 E-value=0.049 Score=45.97 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=44.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeee--eeccCeEEEEEECCCCCCCEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYL--FYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.|..+++...+++++.|+|.-..... .-.|+|...+.............+... .........+++++|+|++.|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 83 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 83 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence 55666666667999999998764322 235666654321111111110000000 001123556789999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 84 ~~~V~A 89 (214)
T 2ibg_A 84 RFRILA 89 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=95.11 E-value=0.07 Score=49.32 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=48.2
Q ss_pred CCCCceEEEEecCCC-eEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 40 SSHPQQVHISLAGDS-HMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~-~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
...|..+.+...+++ ++.|+|.-... ...-.|+|....+....... . ........++|++|+|++.|.
T Consensus 3 ~~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y~ 73 (375)
T 3t1w_A 3 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE-E--------VVHADQSSCTFDNLSPGLEYN 73 (375)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEE-E--------EEETTCCEEEECCCCTTCCEE
T ss_pred CCCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCccee-E--------EcCCCccEEEEcCCcCCCEEE
Confidence 358999988877888 99999997642 23346778775532211111 0 011223456789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
|+|..
T Consensus 74 ~~V~a 78 (375)
T 3t1w_A 74 VSVYT 78 (375)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=95.10 E-value=0.012 Score=43.58 Aligned_cols=64 Identities=19% Similarity=0.175 Sum_probs=40.2
Q ss_pred EEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc
Q 017051 48 ISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (378)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~ 121 (378)
++-.++++++|+|...... ..-.|+|.+..+..... + . ..++...+++|+||+|||.|..+|..
T Consensus 14 vt~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~---~-~------~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 14 VTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ---Y-L------DLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CCCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCE---E-E------EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcce---E-E------ECCCCccEEEECCCCCCCEEEEEEEE
Confidence 3445588999999876432 33567787765321100 0 0 12233456789999999999999854
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.088 Score=44.11 Aligned_cols=70 Identities=13% Similarity=0.144 Sum_probs=43.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCC-CeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGY-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+.. +++++.|+|.-..... .-.|+|+...... ....... .++......+ +|+|+|.|
T Consensus 7 ~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~---------~~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 7 NAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK---------VPNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE---------EETTCSEEEE-ECCSSEEE
T ss_pred CCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec---------cCCCceEEEE-eCCCCCEE
Confidence 3899999998 9999999999763222 2367776543211 1111111 0111123345 89999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 76 ~~~V~A 81 (205)
T 1cfb_A 76 TFRVIA 81 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.093 Score=37.87 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=51.5
Q ss_pred CCCCceEEEEecC--CCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 40 SSHPQQVHISLAG--DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 40 ~~~p~~v~l~~~~--~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
...|.|+-++-.. .++-.|.|...... ..-.+.|+...... .-... .-++....-+|+||+||..|
T Consensus 5 ~~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g------~Wke~----~Ip~h~nSYtI~GL~P~~~Y 74 (98)
T 1oww_A 5 SSGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVG------RWKEA----TIPGHLNSYTIKGLKPGVVY 74 (98)
T ss_dssp -CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSS------CCEEE----EECSSCCEEEECSCCSSEEE
T ss_pred CCcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCC------ceeEE----EecCccceEEEecCCCCcEE
Confidence 3456666565443 78889999998643 33466677765421 11110 23456777789999999999
Q ss_pred EEEeCc-----cC--ceeEEEC
Q 017051 116 FYRCGR-----QG--PEFEFKT 130 (378)
Q Consensus 116 ~Y~v~~-----~s--~~~~F~t 130 (378)
+=++-+ ++ ..+.|+|
T Consensus 75 E~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 75 EGQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEEeeccCcccceEEEEEe
Confidence 999864 22 2677766
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.88 E-value=0.062 Score=41.60 Aligned_cols=68 Identities=15% Similarity=0.251 Sum_probs=44.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+ +++.|+|.-..... .-.|+|.... . .. . . . .........+|++|+|+|.|.
T Consensus 29 ~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~-~~----~--~-~---~~~~~~~~~~i~~L~p~t~Y~ 95 (126)
T 1x5i_A 29 EVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGS-P-HA----Q--T-I---KVDYKQRYYTIENLDPSSHYV 95 (126)
T ss_dssp CSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSC-G-GG----E--E-E---ECCTTCCEEEECSCCSSCEEC
T ss_pred CCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCC-C-Cc----e--E-E---EeCCCeeEEEEeCCCCCCEEE
Confidence 488899888776 99999999774322 2356665311 0 00 0 0 0 122334567899999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
++|..
T Consensus 96 ~~V~A 100 (126)
T 1x5i_A 96 ITLKA 100 (126)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.14 Score=50.39 Aligned_cols=81 Identities=17% Similarity=0.278 Sum_probs=50.1
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+.++++|+|....... .-.|+|........... ..+....++|+||+|+|.|.
T Consensus 442 ~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~------------v~~~~ts~~l~gL~P~T~Y~ 509 (536)
T 3fl7_A 442 TEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNV------------RRTEGFSVTLDDLAPDTTYL 509 (536)
T ss_dssp CCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEE------------EEESSSEEECCSCCSSCEEE
T ss_pred cCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEE------------EcCCCCEEEECCCCCCCEEE
Confidence 357777666566899999998764322 23677776543211000 01112356789999999999
Q ss_pred EEeCc--------cCceeEEECCCC
Q 017051 117 YRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p~ 133 (378)
++|.. .|+...|+|++.
T Consensus 510 frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 510 VQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEcCCcccCCCCCEEEEeCCC
Confidence 99864 267788888764
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.12 Score=43.46 Aligned_cols=71 Identities=14% Similarity=0.172 Sum_probs=45.1
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
...|..+.+...+.+++.|+|...... ..-.|+|....+...... ........++|++|+|++.|
T Consensus 110 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y 178 (209)
T 2vkw_A 110 PSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----------RLPSGSDHVMLKSLDWNAEY 178 (209)
T ss_dssp CCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----------EECTTCCEEEECSCCTTCEE
T ss_pred CCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCCceee-----------ecCCCccEEEecCCCCCCEE
Confidence 457777777666799999999986322 224677776222111110 01122334678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.+||..
T Consensus 179 ~~~V~A 184 (209)
T 2vkw_A 179 EVYVVA 184 (209)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=94.44 E-value=0.29 Score=41.93 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=46.7
Q ss_pred CCCCCceEEEEecC-CCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 39 PSSHPQQVHISLAG-DSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 39 ~~~~p~~v~l~~~~-~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
....|..+++...+ .+++.|+|....... .-.|+|............ . .......+.|.+|+||
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~-~---------~~~~~~~~~l~~L~p~ 190 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV-E---------ILEGRTECVLSNLRGR 190 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE-E---------ECTTCCEEEECCCCSS
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE-E---------EecCceEEEEcccCCC
Confidence 34589999988765 889999999875321 236777765432121100 0 0111235678999999
Q ss_pred CEEEEEeC
Q 017051 113 TVYFYRCG 120 (378)
Q Consensus 113 t~Y~Y~v~ 120 (378)
+.|..||.
T Consensus 191 t~Y~vqVR 198 (227)
T 1eer_B 191 TRYTFAVR 198 (227)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999986
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=94.38 E-value=0.13 Score=47.37 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=46.6
Q ss_pred CCCceEEEEecCCC-eEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 41 SHPQQVHISLAGDS-HMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 41 ~~p~~v~l~~~~~~-~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
..|..+.+...+.+ ++.|.|..... ...-.|+|....+........ ...+....++|++|+|++.|.|
T Consensus 3 ~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t~Y~~ 73 (368)
T 1fnf_A 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEE---------VVHADQSSCTFDNLSPGLEYNV 73 (368)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEE---------EECTTCCEEECCCCCTTSCEEE
T ss_pred CCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEE---------EecCCcCEEEECCCCCCCEEEE
Confidence 47889988876665 69999998642 233477777654322111110 0112234678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 74 ~V~a 77 (368)
T 1fnf_A 74 SVYT 77 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=94.23 E-value=0.048 Score=52.43 Aligned_cols=71 Identities=17% Similarity=0.206 Sum_probs=47.1
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
..|..+++.-.+.+|++++|..... ...-.|+|.+....... . +. ..++-..+++|+||+|||.|..+
T Consensus 371 ~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~----~---~~---~~~~~~~~~~i~~L~p~t~Y~~~ 440 (461)
T 3csg_A 371 SVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPV----Q---EF---TVPGSKSTATISGLSPGVDYTIT 440 (461)
T ss_dssp CSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCC----E---EE---EEETTCCEEEECSCCTTCEEEEE
T ss_pred CCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccc----e---EE---EecCCCceEEecCCCCCCEEEEE
Confidence 3688888998889999999987621 12346777766421100 0 00 11122367899999999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 441 v~a 443 (461)
T 3csg_A 441 VYA 443 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=94.06 E-value=0.28 Score=42.28 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=53.5
Q ss_pred CCCCCCceEEEEecC-CCeEEEEEEcCCCCC------CcEEEEeccCC-CCCeeEEeeeeEEeeeeeccCeEEEEEECCC
Q 017051 38 KPSSHPQQVHISLAG-DSHMRVTWITDDESS------PSVVEYGTSPG-GYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~-~~~~~i~W~t~~~~~------~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L 109 (378)
.....|..+.+.... ..++.|+|....... .-.|+|+.... ....... .......+.+.+|
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~-----------~~~t~~~i~l~~L 179 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVN-----------LSSTKLTLLQRKL 179 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEE-----------ESSSEEEEEGGGS
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEE-----------ecCceeEEecccc
Confidence 344588888888765 678999999874221 23677776532 1121111 1112234557899
Q ss_pred CCCCEEEEEeCc------------cCceeEEECCCC
Q 017051 110 EHDTVYFYRCGR------------QGPEFEFKTPPA 133 (378)
Q Consensus 110 ~p~t~Y~Y~v~~------------~s~~~~F~t~p~ 133 (378)
+|||.|..||.. ||....|+|++.
T Consensus 180 ~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 180 QPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp CTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 999999999852 255677888764
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=94.01 E-value=0.19 Score=45.25 Aligned_cols=83 Identities=10% Similarity=0.023 Sum_probs=50.9
Q ss_pred CCCCceEEEEec------CCCeEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECC
Q 017051 40 SSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (378)
Q Consensus 40 ~~~p~~v~l~~~------~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~ 108 (378)
...|..+.+... ..+++.|+|....... .-.|+|+ ......+..+. ......+.++|++
T Consensus 203 p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~----------~~~~~~~~~~l~~ 272 (313)
T 2d9q_B 203 LEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG----------PLPLEALQYELCG 272 (313)
T ss_dssp CCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE----------EECSCEEEEEECS
T ss_pred cCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcc----------cccCcceEEEEeC
Confidence 457777766543 3689999999764221 2467787 44332222211 0122356678999
Q ss_pred CCCCCEEEEEeCc-----------cCceeEEECCC
Q 017051 109 LEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (378)
Q Consensus 109 L~p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (378)
|+|+|.|.+||.. +|+...++|+.
T Consensus 273 L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 273 LLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp CCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 9999999999863 24556677754
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=93.83 E-value=0.15 Score=38.91 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=48.2
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCC--CCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDD--ESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~--~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.++..|..+.+.. ..+++.|+|.-.. ... .-.|.|+.......... .... +.+++. |+|
T Consensus 17 ~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~-----------~~~~--~~~~~~-L~~ 81 (117)
T 1wj3_A 17 PPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL-----------NTNK--TSAELV-LPI 81 (117)
T ss_dssp CCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE-----------EESS--SEEEEE-CCC
T ss_pred CCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEE-----------eCCC--cEEEEE-CCC
Confidence 4455677776655 6789999998762 122 12455665443211110 0111 245666 999
Q ss_pred CCEEEEEeCc--------cCceeEEECCCC
Q 017051 112 DTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
++.|.+||.. .|+...|+|...
T Consensus 82 ~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 82 KEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp SSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred CCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999999864 255667877653
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=93.71 E-value=0.093 Score=45.14 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=46.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+.+++.|+|.-..... .-.|+|.......... +...... .........+|++|+|++.|.
T Consensus 100 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 174 (234)
T 3f7q_A 100 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYR 174 (234)
T ss_dssp CCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCCEE
T ss_pred CCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCeEE
Confidence 357888888778999999998653321 2366776654322110 0000000 112223466789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
++|..
T Consensus 175 ~~V~A 179 (234)
T 3f7q_A 175 YTVKA 179 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=93.38 E-value=0.15 Score=49.44 Aligned_cols=87 Identities=11% Similarity=0.150 Sum_probs=54.6
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
....|..+++...+++++.|+|........ -.|+|+......... . .. .. ......+.++|.+|+|+|.
T Consensus 386 ~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~~-~---~~--~~-~~~~~~~~v~l~~L~P~T~ 458 (488)
T 2q7n_A 386 APHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEVR-N---AT--IR-GAEDSTYHVAVDKLNPYTA 458 (488)
T ss_dssp CCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEEE-E---EE--EE-CCEEEEEEEEECSCCSSCC
T ss_pred CCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCceE-E---EE--Ee-cCCCcEEEEEeCCCCCCce
Confidence 455889898887778999999998743222 356676554321110 0 00 00 0112356678999999999
Q ss_pred EEEEeCc----------cCceeEEECCC
Q 017051 115 YFYRCGR----------QGPEFEFKTPP 132 (378)
Q Consensus 115 Y~Y~v~~----------~s~~~~F~t~p 132 (378)
|.+||.. +|+...|+|++
T Consensus 459 Y~~rVRA~~~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 459 YTFRVRCSSKTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp BBCCEEEEESSCSSCCCCCCCCCBCCCC
T ss_pred EEEEEEEEECCCCCCCCCcCCEeEECCC
Confidence 9999852 24556677765
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=93.29 E-value=0.3 Score=44.91 Aligned_cols=71 Identities=11% Similarity=0.066 Sum_probs=46.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+.+++.|+|...... ..-.|+|........... . ...+.....+|+||+||+.|.++|
T Consensus 279 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~----~------~~~~~~~~~~i~~L~p~t~Y~~~V 348 (375)
T 3t1w_A 279 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----D------RVPHSRNSITLTNLTPGTEYVVSI 348 (375)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEE----E------EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCccee----E------EcCCCccEEEECCCCCCCEEEEEE
Confidence 47888877766789999999885332 334677776653111100 0 011123356789999999999999
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 349 ~A 350 (375)
T 3t1w_A 349 VA 350 (375)
T ss_dssp EE
T ss_pred EE
Confidence 74
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=93.22 E-value=0.45 Score=43.78 Aligned_cols=82 Identities=17% Similarity=0.299 Sum_probs=46.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..| .+.....+.+++.|+|.-..... .-.|+|........... . ...+.....+|++|+|++.|.
T Consensus 295 ~~p-~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~----~------~~~~~~~~~~i~~L~~~t~Y~ 363 (389)
T 2jll_A 295 SPP-SIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE----K------KVQGNKDHIILEHLQWTMGYE 363 (389)
T ss_dssp CCC-CEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBC----C------EECTTCCEEEECSCCTTCEEE
T ss_pred CCC-ccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeE----e------eccCCcceEEeCCcCCCCEEE
Confidence 344 35555567999999998643222 23566765332111100 0 112223456789999999999
Q ss_pred EEeCcc-----C--ceeEEECCCC
Q 017051 117 YRCGRQ-----G--PEFEFKTPPA 133 (378)
Q Consensus 117 Y~v~~~-----s--~~~~F~t~p~ 133 (378)
+||... | ....|+|++.
T Consensus 364 ~~V~A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 364 VQITAANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp EEEEEEC-CCBCCCEEEEEECCCC
T ss_pred EEEEEEcCCcCCCceeeEecCCCC
Confidence 998641 1 2347888764
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=93.22 E-value=0.75 Score=42.01 Aligned_cols=72 Identities=11% Similarity=0.040 Sum_probs=45.8
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC-CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS-PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
...|..+.+...+.+++.|+|......- .-.|+|........... . .........+|++|+|++.|.|+
T Consensus 186 ~~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~----~------~~~~~~~~~~i~~L~p~t~Y~~~ 255 (368)
T 1fnf_A 186 LDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE----D------RVPHSRNSITLTNLTPGTEYVVS 255 (368)
T ss_dssp CCCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE----E------EEETTCCEEEEESCCTTCEEEEE
T ss_pred CCCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccE----E------EeCCCcCEEEECCCCCCCEEEEE
Confidence 3478888777667899999998764322 24677766543211110 0 01122335678899999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 256 V~A 258 (368)
T 1fnf_A 256 IVA 258 (368)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.85 E-value=0.41 Score=40.09 Aligned_cols=85 Identities=18% Similarity=0.120 Sum_probs=48.6
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+. ...+++++.|...... ..+ .|+|.......+....-. . .........+|.+|+|++.|
T Consensus 115 ~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~-----~--~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 115 SSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-----A--KEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp CCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEE-----H--HHHHHHTEEEEECCCTTCEE
T ss_pred CCCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccc-----c--ccccccccEEECCCCCCCEE
Confidence 356555443 3477899999854321 111 477766554322211100 0 01011145668999999999
Q ss_pred EEEeCc--------cCceeEEECCCC
Q 017051 116 FYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.|||.. .|....|+|+|.
T Consensus 187 ~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 187 AVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EEEEEEEeCCcccCcccceeeEeccc
Confidence 999864 256778999874
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=92.51 E-value=0.49 Score=46.85 Aligned_cols=69 Identities=20% Similarity=0.187 Sum_probs=47.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|....++-.+.++++++|...... ..-.||+.+.++..+..+. .+ .. -..+++||.||+.|
T Consensus 11 ~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~--------~~---t~~~V~~L~~g~~Y 78 (573)
T 3uto_A 11 EPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS--------RY---TYTTIEGLRAGKQY 78 (573)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE--------SS---SEEEECCCCTTCEE
T ss_pred ccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc--------cC---CEEEeCCCCCCCcE
Confidence 36777777878899999999976422 2246788877765554332 21 11 13568999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 79 ~FRV~A 84 (573)
T 3uto_A 79 EFRIIA 84 (573)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 999974
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.38 E-value=0.12 Score=50.10 Aligned_cols=88 Identities=10% Similarity=0.051 Sum_probs=55.1
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
.....|..+++....++++.|+|...... -.-.|+|.......... ..... ......+.+.|.+|+|||
T Consensus 380 VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~-~~~~~~~s~~l~~L~PgT 452 (483)
T 3e0g_A 380 VYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQ-GVENSSYLVALDKLNPYT 452 (483)
T ss_dssp BCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCB-CCSSSBCCCCCCSCCSSS
T ss_pred cCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEe-ccCCceeEEEEeccCCCc
Confidence 34458888888756688999999987432 23578888765322111 00000 011223456789999999
Q ss_pred EEEEEeCc----------cCceeEEECCC
Q 017051 114 VYFYRCGR----------QGPEFEFKTPP 132 (378)
Q Consensus 114 ~Y~Y~v~~----------~s~~~~F~t~p 132 (378)
.|..||.. +|+...|+|+.
T Consensus 453 ~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 453 LYTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp SCEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 99999863 24556677765
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.35 E-value=0.28 Score=41.43 Aligned_cols=74 Identities=14% Similarity=0.083 Sum_probs=42.3
Q ss_pred CCCCCCceEEEEec-CCCeEEEEEEcCCCCC---CcEEEEeccCC-CCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 38 KPSSHPQQVHISLA-GDSHMRVTWITDDESS---PSVVEYGTSPG-GYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 38 ~~~~~p~~v~l~~~-~~~~~~i~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
.....|..+++... ..+++.|.|....... .-.|+|..... ....... ........+.|.+|+||
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~----------~~~~~~~~~~l~~L~p~ 177 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYE----------VYDAKSKSVSLPVPDLC 177 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEE----------ECC---CEEEECCSCTT
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEe----------cccCcceeEEeecCCCC
Confidence 44557888888765 4889999999764322 23567776542 1111111 01111235779999999
Q ss_pred CEEEEEeCc
Q 017051 113 TVYFYRCGR 121 (378)
Q Consensus 113 t~Y~Y~v~~ 121 (378)
|.|.+||..
T Consensus 178 t~Y~vqVRa 186 (206)
T 3v6o_A 178 AVYAVQVRC 186 (206)
T ss_dssp SCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.98 E-value=0.13 Score=42.87 Aligned_cols=67 Identities=18% Similarity=0.162 Sum_probs=39.7
Q ss_pred eEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc
Q 017051 45 QVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (378)
Q Consensus 45 ~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~ 121 (378)
.+.+...+.+++.|+|.-.... ..-.|+|.......... .. ...+....++|+||+||+.|.++|..
T Consensus 117 ~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~----~~------~v~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 117 SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ----YL------DLPSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE----EE------EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCcee----EE------EcCCceeEEEeCCCCCCCEEEEEEEE
Confidence 3445545688999999766322 12356676532211110 00 01223456779999999999999864
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=91.91 E-value=0.64 Score=40.92 Aligned_cols=74 Identities=15% Similarity=0.220 Sum_probs=43.6
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
...|..+.+... .+++.|+|.-.... ..-.|+|............ +.. ..........+++|+|++.|.++
T Consensus 102 ~~p~~~~~~~~~-~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~L~p~t~Y~~~ 173 (290)
T 3l5i_A 102 THPVMDLKAFPK-DNMLWVEWTTPRESVKKYILEWCVLSDKAPCITD-----WQQ--EDGTVHRTYLRGNLAESKCYLIT 173 (290)
T ss_dssp CCCCEEEEEEEE-TTEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE-----EEE--EETTCSEEECCSCCCTTCEEEEE
T ss_pred CCccceeEEEeC-CCeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC-----eEE--ccCCCcceEEecCcCCccEEEEE
Confidence 344555655544 47999999877442 3346777765433111000 000 11233445668999999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 174 V~A 176 (290)
T 3l5i_A 174 VTP 176 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.89 E-value=0.8 Score=46.26 Aligned_cols=79 Identities=10% Similarity=0.148 Sum_probs=46.4
Q ss_pred CCCCCCceEEEEec--CCC---eEEEEEEcCCCCC----CcEEEEecc-CCCCCeeEEeeeeEEeeeeeccCeEEEEEEC
Q 017051 38 KPSSHPQQVHISLA--GDS---HMRVTWITDDESS----PSVVEYGTS-PGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 38 ~~~~~p~~v~l~~~--~~~---~~~i~W~t~~~~~----~~~v~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
.+...|..+.+... +.+ +++|+|.-..... .-.|+|... ....... ....... ...+....++|+
T Consensus 265 ~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~----~v~~~~~~~~l~ 339 (680)
T 1zlg_A 265 SAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRK----TTDGFQNSVILE 339 (680)
T ss_pred CCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEE----EEcCCeeEEEeC
Confidence 45668888988876 667 9999998553222 235666522 1100000 0000000 122345678899
Q ss_pred CCCCCCEEEEEeCc
Q 017051 108 PLEHDTVYFYRCGR 121 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (378)
+|+|++.|.+||..
T Consensus 340 ~L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 340 KLQPDCDYVVELQA 353 (680)
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999864
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=91.63 E-value=0.65 Score=39.64 Aligned_cols=88 Identities=11% Similarity=0.205 Sum_probs=53.3
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCC---------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDES---------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~---------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~ 108 (378)
.....|..+.+.. ...+.|+|...... -.-.|+|......-........ . ...+....+.+.+
T Consensus 99 Vkp~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~~-----~-~~~~~~~~~~~~~ 170 (219)
T 3tgx_A 99 IKPAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRKL-----I-SVDSRSVSLLPLE 170 (219)
T ss_dssp BCCCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEEE-----E-CSSCSEEEECTTS
T ss_pred EEeCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceeccccee-----E-ecCCCEEEEEecc
Confidence 4445788777763 46899999986431 1246778776532111101110 0 1123355667889
Q ss_pred CCCCCEEEEEeCc--------------cCceeEEECCCC
Q 017051 109 LEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (378)
Q Consensus 109 L~p~t~Y~Y~v~~--------------~s~~~~F~t~p~ 133 (378)
|.||+.|..||.. ||+...|+|+++
T Consensus 171 L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 171 FRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp SCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 9999999999852 256678888775
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=91.42 E-value=0.29 Score=42.36 Aligned_cols=71 Identities=13% Similarity=0.103 Sum_probs=42.6
Q ss_pred CCCCCceEEEEecC--C----CeEEEEEEcCCCC--------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEE
Q 017051 39 PSSHPQQVHISLAG--D----SHMRVTWITDDES--------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (378)
Q Consensus 39 ~~~~p~~v~l~~~~--~----~~~~i~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 104 (378)
....|..+.++... . .++.|+|...... -.-.|+|............ ......+
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------~~~~~~~ 197 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSV 197 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEE
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------ccCCCEE
Confidence 34578888655433 2 3499999987432 1235667665432211110 1112456
Q ss_pred EECCCCCCCEEEEEeCc
Q 017051 105 VIGPLEHDTVYFYRCGR 121 (378)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~ 121 (378)
+|.+|+||+.|..||..
T Consensus 198 ~l~~L~p~t~Y~vqVRa 214 (236)
T 1axi_B 198 PVYSLKVDKEYEVRVRS 214 (236)
T ss_dssp EEEEEETTSCEEEEEEE
T ss_pred EEeccCCCCEEEEEEEE
Confidence 78899999999999963
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=91.31 E-value=0.73 Score=38.88 Aligned_cols=88 Identities=9% Similarity=0.036 Sum_probs=45.3
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCC-------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
.....|..+.+....+....|+|...... =.-.|+|+......... ... . ..........+.+|.
T Consensus 96 Vkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~~-~~~-----~--~~~~~~~~~~~~~L~ 167 (207)
T 1iar_B 96 VKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFR-IYN-----V--TYLEPSLRIAASTLK 167 (207)
T ss_dssp BCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEE-EEE-----E--CSSCCEEEECC----
T ss_pred cccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhhe-eee-----e--ecCCcEEEEEHHHCC
Confidence 44558888888754566899999987421 12467787654322111 100 0 122344556667999
Q ss_pred CCCEEEEEeCc-----------cCceeEEECCCC
Q 017051 111 HDTVYFYRCGR-----------QGPEFEFKTPPA 133 (378)
Q Consensus 111 p~t~Y~Y~v~~-----------~s~~~~F~t~p~ 133 (378)
||+.|..||.. +|....|+|.++
T Consensus 168 p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 168 SGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp -CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 99999999863 356677887653
|
| >2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.67 E-value=1.1 Score=45.57 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=55.3
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
.+...|..+.+...++++++|+|.-.... ..-.|+|............... . ........++|++|+|
T Consensus 358 ~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~----~--~~~~~~~~~~i~~L~p 431 (731)
T 2v5y_A 358 DPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVS----W--DTENSHPQHTITNLSP 431 (731)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEE----C--CSSCSSCEEEECSCCS
T ss_pred CCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEE----E--EecCCcceEEECCCCC
Confidence 34467889988878899999999875321 1235777765432111110000 0 1222345578999999
Q ss_pred CCEEEEEeCc-------cCceeEEECCC
Q 017051 112 DTVYFYRCGR-------QGPEFEFKTPP 132 (378)
Q Consensus 112 ~t~Y~Y~v~~-------~s~~~~F~t~p 132 (378)
+|.|.++|.. .|....++|+.
T Consensus 432 ~t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 432 YTNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp SCEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CCEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 9999999864 25566777753
|
| >2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=90.64 E-value=1.4 Score=38.34 Aligned_cols=70 Identities=13% Similarity=0.182 Sum_probs=46.2
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
....|..++++......+.|.|....... .-.|+|+...+........ . ......|.+|+|++.|.
T Consensus 136 kP~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~----------~--~~~~~~l~~L~p~~~Y~ 203 (247)
T 2erj_C 136 IPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV----------D--YRHKFSLPSVDGQKRYT 203 (247)
T ss_dssp ECCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEE----------C--SSCEEEESCCCTTSCEE
T ss_pred EeCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEec----------C--CceEEEecCCCCCCEEE
Confidence 34588888888766789999999874211 1358887754432222110 0 12345678999999999
Q ss_pred EEeC
Q 017051 117 YRCG 120 (378)
Q Consensus 117 Y~v~ 120 (378)
.||.
T Consensus 204 vqVR 207 (247)
T 2erj_C 204 FRVR 207 (247)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9986
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=90.59 E-value=1.2 Score=40.09 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=46.2
Q ss_pred CCCCCceEEEEecC--CCeEEEEEEcCCCC--C----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 39 PSSHPQQVHISLAG--DSHMRVTWITDDES--S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 39 ~~~~p~~v~l~~~~--~~~~~i~W~t~~~~--~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
....|..+.+...+ ++++.|+|...... . .-.|+|+......+.... .......++|.+|+
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~-----------~~~~~~~~~l~~L~ 264 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAW 264 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCC
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEc-----------ccCCceEEEEeCCC
Confidence 34578888888664 46999999987531 1 235777765432222111 01112456789999
Q ss_pred CCCEEEEEeCc
Q 017051 111 HDTVYFYRCGR 121 (378)
Q Consensus 111 p~t~Y~Y~v~~ 121 (378)
|++.|.+||..
T Consensus 265 p~t~Y~~rVrA 275 (325)
T 1n26_A 265 SGLRHVVQLRA 275 (325)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99999999863
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.18 E-value=0.11 Score=36.38 Aligned_cols=36 Identities=22% Similarity=0.295 Sum_probs=24.6
Q ss_pred ccCeEEEEEECCCCCCCEEEEEeCc-----cC--ceeEEECCC
Q 017051 97 RSGKIHHTVIGPLEHDTVYFYRCGR-----QG--PEFEFKTPP 132 (378)
Q Consensus 97 ~~~~~h~~~l~~L~p~t~Y~Y~v~~-----~s--~~~~F~t~p 132 (378)
.++..++-+|.||+||++|.=++.+ .+ ..+.|+|-.
T Consensus 33 IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~EvtrfdfTT~~ 75 (89)
T 1q38_A 33 IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 75 (89)
T ss_dssp ECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEECSSS
T ss_pred cCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEEEEecc
Confidence 3445555668999999999998753 12 346777643
|
| >2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C* | Back alignment and structure |
|---|
Probab=90.08 E-value=1.2 Score=37.10 Aligned_cols=71 Identities=13% Similarity=0.171 Sum_probs=47.0
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
....|..++++......+.|.|...... -.-.|+|+...+........ .......|.+|.|++.|.
T Consensus 98 kP~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y~ 165 (199)
T 2b5i_C 98 IPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYT 165 (199)
T ss_dssp ECCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCEE
T ss_pred ecCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEEE
Confidence 3458888888876678999999987421 12468888765432222110 012345678999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
.||..
T Consensus 166 vqVR~ 170 (199)
T 2b5i_C 166 FRVRS 170 (199)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=90.07 E-value=0.53 Score=44.88 Aligned_cols=74 Identities=11% Similarity=0.027 Sum_probs=48.9
Q ss_pred CCeEEEEEcccCCCCC------hHHHHHHhhcC-CCcEEEeccccccccch----------------hhhHHHHH-HhhH
Q 017051 135 FPITFAVAGDLGQTGW------TKSTLDHIGQC-KYDVHLLPGDLSYADYM----------------QHRWDTFG-ELVQ 190 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~------~~~~~~~i~~~-~~d~vi~~GDl~~~~~~----------------~~~~~~~~-~~~~ 190 (378)
.++++++.+..-.... ...+++.+++. +||.+|++|.+++.... ...++.++ ..+.
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 5789999888754332 24566666664 89999999999976532 12234433 3333
Q ss_pred ----hhhhCCceeecCCCCccC
Q 017051 191 ----PLASARPWMVTQGNHEKE 208 (378)
Q Consensus 191 ----~l~~~~P~~~v~GNHD~~ 208 (378)
.+...+-++.|||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 333446799999999995
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=89.91 E-value=1.5 Score=42.95 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=47.6
Q ss_pred ccCCCCCCCCCCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCC-eeEEeeeeEEeeeeeccCeEEEEE
Q 017051 32 EFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYN-CGAEGESTSYRYLFYRSGKIHHTV 105 (378)
Q Consensus 32 ~~~~~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~ 105 (378)
..++.. +...|..+. ...++++++|+|.-..... .-.|+|........ ....+....+... ........++
T Consensus 327 ~~~ct~-pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~ts~t 403 (536)
T 3fl7_A 327 SMPCTR-PPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-PHGLTRTSVT 403 (536)
T ss_dssp TSCCBC-CCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-SSSBCSSEEE
T ss_pred cccccc-CCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-ecCCccceeE
Confidence 345443 445888884 4567899999998654322 23566665321110 0000110111100 1112345678
Q ss_pred ECCCCCCCEEEEEeCc
Q 017051 106 IGPLEHDTVYFYRCGR 121 (378)
Q Consensus 106 l~~L~p~t~Y~Y~v~~ 121 (378)
|++|+|+|.|.++|..
T Consensus 404 I~gL~P~T~Y~frV~A 419 (536)
T 3fl7_A 404 VSDLEPHMNYTFTVEA 419 (536)
T ss_dssp EECCCTTCEEEEEEEE
T ss_pred eCCCCCCCEEEEEEEE
Confidence 9999999999999853
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.81 E-value=0.18 Score=49.73 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=50.7
Q ss_pred CCCCceEEEEe--cCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 40 SSHPQQVHISL--AGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 40 ~~~p~~v~l~~--~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
...|..+.+.. .+++++.|+|....... .-.|+|+......+...... .........++++|+|+|
T Consensus 199 p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~t 270 (589)
T 3l5h_A 199 PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFT 270 (589)
T ss_dssp CCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSSC
T ss_pred cCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCCC
Confidence 44777787753 34889999998654221 23567766543222111000 011223456789999999
Q ss_pred EEEEEeCc-----------cCceeEEECCC
Q 017051 114 VYFYRCGR-----------QGPEFEFKTPP 132 (378)
Q Consensus 114 ~Y~Y~v~~-----------~s~~~~F~t~p 132 (378)
.|.+||.. +|....++|++
T Consensus 271 ~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~ 300 (589)
T 3l5h_A 271 EYVFRIRCMKEDGKGYWSDWSEEASGITYE 300 (589)
T ss_dssp CEEEEEEEEESSSCSCCCCCCCCBCCCCCC
T ss_pred EEEEEEEEEeCCCCCccCCCCCccccccCc
Confidence 99999863 14556677754
|
| >2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A | Back alignment and structure |
|---|
Probab=89.22 E-value=3.2 Score=38.89 Aligned_cols=86 Identities=19% Similarity=0.167 Sum_probs=50.9
Q ss_pred CCCCCCceEEEEecCCCeEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEEC
Q 017051 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
.....|..|.+...+ +.+.|+|....... .-.|+|+... ......... ......+.+.+.
T Consensus 107 v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~--------~~~~~~~~~~~~ 176 (419)
T 2gys_A 107 VQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL--------LSNTSQATLGPE 176 (419)
T ss_dssp BCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE--------EESSSEEEECTT
T ss_pred ccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee--------cccceEEEechh
Confidence 455689999888766 69999999875321 1356676654 221111100 011223333344
Q ss_pred CCCCCCEEEEEeCc--------------cCceeEEECCCC
Q 017051 108 PLEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~--------------~s~~~~F~t~p~ 133 (378)
+|.|++.|..||.. +|+...|+|++.
T Consensus 177 ~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~ 216 (419)
T 2gys_A 177 HLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216 (419)
T ss_dssp TCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred hcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence 99999999999863 135567777654
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=89.13 E-value=0.71 Score=38.62 Aligned_cols=71 Identities=7% Similarity=0.045 Sum_probs=44.9
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCC-CCCCEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDTVY 115 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L-~p~t~Y 115 (378)
...|..+.+...+.++++++|.-..... .-.|+|........ .+. ........++|++| +|++.|
T Consensus 8 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~~~t~Y 76 (215)
T 1bqu_A 8 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFVNI 76 (215)
T ss_dssp CCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTSCE
T ss_pred CCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----ccc------cccCCcceEEEcCCccccccE
Confidence 3488888877677899999999765432 23555554321100 000 11222346789999 999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.++|..
T Consensus 77 ~~~V~A 82 (215)
T 1bqu_A 77 EVWVEA 82 (215)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C* | Back alignment and structure |
|---|
Probab=89.04 E-value=1.5 Score=39.26 Aligned_cols=81 Identities=12% Similarity=0.005 Sum_probs=46.5
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEee---eeEEeeeeeccCeEEEEEECCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGE---STSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
....|..+++. ...+++.|+|....... .-.|+|............-. +... ...........++|.+|+|
T Consensus 199 ~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~-~~~~~~~~~~~~~l~~L~p 276 (314)
T 3bpo_C 199 KPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENP-EFERNVENTSCFMVPGVLP 276 (314)
T ss_dssp ECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCT-TSSCCCSSEEEEEEESCCT
T ss_pred eeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccccccccc-ccccccCCceEEEEccCCC
Confidence 35588888887 56789999999875322 13567766543222111000 0000 0000112456778999999
Q ss_pred CCEEEEEeCc
Q 017051 112 DTVYFYRCGR 121 (378)
Q Consensus 112 ~t~Y~Y~v~~ 121 (378)
||.|.+||..
T Consensus 277 ~t~Y~~qVra 286 (314)
T 3bpo_C 277 DTLNTVRIRV 286 (314)
T ss_dssp TSCEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999999864
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=88.69 E-value=3.5 Score=37.62 Aligned_cols=81 Identities=21% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.+++.+.|.-.... +. -.|+|...+....... ...+.....+|.+|+|++.|
T Consensus 197 ~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~l~~~~~y 265 (389)
T 2jll_A 197 SSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIV-----------RSHGVQTMVVLNNLEPNTTY 265 (389)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEE-----------ECSTTCSEEEECSCCTTCEE
T ss_pred CCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEe-----------eccCCcceEEECCccCCCEE
Confidence 36767777766788999999854222 11 2466665543222111 11223345678999999999
Q ss_pred EEEeCc--------cCceeEEECCC
Q 017051 116 FYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~--------~s~~~~F~t~p 132 (378)
.|+|.. .+....|+|.+
T Consensus 266 ~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 266 EIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp EEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEEcCCccCCCCcceEEEecC
Confidence 999863 14456677744
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.44 E-value=1 Score=45.50 Aligned_cols=76 Identities=13% Similarity=0.222 Sum_probs=42.4
Q ss_pred CC-ceEEEEecCCCeEEEEEEcCCC----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HP-QQVHISLAGDSHMRVTWITDDE----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p-~~v~l~~~~~~~~~i~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.| ..+.+.-.++++++|.|..... +-.-.|+|+...+.... ......+... .......++|++|+|++.|.
T Consensus 162 ~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~--~~~~~~w~~v--~~~~~~~~~i~~L~P~t~Y~ 237 (680)
T 1zlg_A 162 KPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPS--EDDATHWQTV--AQTTDERVQLTDIRPSRWYQ 237 (680)
T ss_pred cccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcC--ccccCceEEE--EecCCCeEEeCCCCCCCEEE
Confidence 56 6777776779999999997522 11135666654220000 0000000000 01122346789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
|||..
T Consensus 238 frV~A 242 (680)
T 1zlg_A 238 FRVAA 242 (680)
T ss_pred EEEEE
Confidence 99863
|
| >3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A | Back alignment and structure |
|---|
Probab=85.09 E-value=1.4 Score=39.56 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=36.9
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCC---CCeeEEe--eeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGG---YNCGAEG--ESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.|.-+.++ .+.+.+.++|.++.......=-|+...+. ....+.. ++++|+ =++|.+|++|+
T Consensus 20 ~~~~L~at-~~~~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tyt-------------Dt~~~~GttYy 85 (344)
T 3b4n_A 20 AQTTLMLS-QKSDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFK-------------DADTNSGLNYW 85 (344)
T ss_dssp CCEEEEEE-EETTEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEE-------------ECCCCTTCCCE
T ss_pred CCceeeee-ccCCeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEEE-------------ecCcCCCcEEE
Confidence 34444333 35899999999885222222335554432 1223322 222222 36999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
|.|..
T Consensus 86 YwVk~ 90 (344)
T 3b4n_A 86 YWVDV 90 (344)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99863
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.92 E-value=5.3 Score=33.15 Aligned_cols=65 Identities=12% Similarity=0.120 Sum_probs=38.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC--------------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEEC
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES--------------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
.| .|++. ...+++.|.|...... -.-.|.|............ .....++|.
T Consensus 96 PP-~v~~~-~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~-------------~~~~~~~l~ 160 (201)
T 3lqm_A 96 PP-GMQVE-VLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT-------------PQYDFEVLR 160 (201)
T ss_dssp CC-EEEEE-EETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC-------------CSSSEEEEC
T ss_pred CC-EEEEE-EeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE-------------ecCceEEEe
Confidence 45 57775 3468999999876311 1224555554322111100 011247799
Q ss_pred CCCCCCEEEEEeCc
Q 017051 108 PLEHDTVYFYRCGR 121 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (378)
+|+|+|.|..+|..
T Consensus 161 ~L~p~t~Ycv~V~a 174 (201)
T 3lqm_A 161 NLEPWTTYCVQVRG 174 (201)
T ss_dssp SCCTTCEEEEEEEE
T ss_pred cCCCCCcEEEEEEE
Confidence 99999999999863
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.80 E-value=6 Score=35.29 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=37.7
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC-----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECC
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS-----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~ 108 (378)
...|. |.+.. ..+++.|+|. ..... .-.|.|+...+....... . ....++|.+
T Consensus 102 ~~pP~-v~~~~-~~~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~----------~---~~~~~~l~~ 165 (306)
T 3s98_A 102 IGPPE-VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE----------N---IYSRHKIYK 165 (306)
T ss_dssp CCCCE-EEEEE-CSSCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEE----------E---ECTEEEECS
T ss_pred cCCCe-EEEEE-cCCEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEe----------c---ccceEEEcc
Confidence 34554 77774 3468999998 32211 114555554432211110 0 123577999
Q ss_pred CCCCCEEEEEeC
Q 017051 109 LEHDTVYFYRCG 120 (378)
Q Consensus 109 L~p~t~Y~Y~v~ 120 (378)
|+|+|.|..+|.
T Consensus 166 L~p~t~Y~~~V~ 177 (306)
T 3s98_A 166 LSPETTYCLKVK 177 (306)
T ss_dssp CCTTCEEEEEEE
T ss_pred CCCCCeEEEEEE
Confidence 999999999985
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.35 E-value=1.8 Score=36.40 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=42.1
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
..|. +.|+ .+.+++.|.|......-.-.|.|+..+....... ... .. ....++|.+|+|+|.|..+|.
T Consensus 111 ~PP~-v~v~-~~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~-------~~~-~~--~~~~~~i~~L~p~t~Ycv~Vr 178 (206)
T 4doh_B 111 TRPG-MEIT-KDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHV-------KMV-RS--GGIPVHLETMEPGAAYCVKAQ 178 (206)
T ss_dssp CCCC-EEEE-EETTEEEEEECCCCTTCEEEEEEEESSSSCCCEE-------EEE-CC--SSSEEEEEECCSSSCEEEEEE
T ss_pred CCCe-EEEE-eCCCEEEEEecCCCCcEEEEEEEEEcCCCceeEE-------eEE-cc--CCeEEEEeCCCCCCcEEEEEE
Confidence 3444 7776 5688999999755322334677877654322110 000 01 123467999999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 179 a 179 (206)
T 4doh_B 179 T 179 (206)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.07 E-value=5.8 Score=33.65 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-----C------------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-----S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-----~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 103 (378)
..|. |.|+ ...+++.|.|.-.... + .-.|.|........ .... .. -+.
T Consensus 110 gPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~--~~~~--------~~---~~~ 174 (221)
T 4doh_R 110 GPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT--WSQC--------VT---NHT 174 (221)
T ss_dssp CCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE--EEEE--------EC---SSE
T ss_pred CCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE--EEEe--------ec---CcE
Confidence 4565 8888 5678999999865321 0 12566666543211 1000 11 136
Q ss_pred EEECCCCCCCEEEEEeCc----------cCceeEEECCCC
Q 017051 104 TVIGPLEHDTVYFYRCGR----------QGPEFEFKTPPA 133 (378)
Q Consensus 104 ~~l~~L~p~t~Y~Y~v~~----------~s~~~~F~t~p~ 133 (378)
++|.+|+|+|.|..+|.. .|+..-|+|.+.
T Consensus 175 ~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 175 LVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 679999999999999853 144555666553
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=82.35 E-value=2.3 Score=37.73 Aligned_cols=72 Identities=8% Similarity=0.079 Sum_probs=44.7
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCC-CCCCE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDTV 114 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L-~p~t~ 114 (378)
+...|..+.....+.++++++|.-..... .-.|+|........ .+. ...+....++|++| +|++.
T Consensus 103 ~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~p~t~ 171 (303)
T 1i1r_A 103 PPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFVN 171 (303)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTSC
T ss_pred CCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCc-----cCC------CcCCCceEEEECCcCccccc
Confidence 34578888777666789999999764322 23555654321100 000 11223356789999 99999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.+||..
T Consensus 172 Y~f~V~A 178 (303)
T 1i1r_A 172 IEVWVEA 178 (303)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.77 E-value=5.9 Score=34.56 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=41.4
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+.....++++++|...... ... .|+|...+...+ ...+. .. ....+|.+|+|++.|
T Consensus 200 ~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w-~~~~~--------~~---~~~~~i~~l~~~~~y 267 (305)
T 2nzi_A 200 DPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERW-LRVGQ--------AR---ETRYTVINLFGKTSY 267 (305)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCE-EEEEE--------ES---SSEEEECSCCSSCEE
T ss_pred CCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCcc-EECcc--------cc---CceEEecCCCCCCeE
Confidence 46777777766789999999864222 222 344444332211 11111 01 234678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 268 ~~~~~A 273 (305)
T 2nzi_A 268 QFRVIA 273 (305)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=80.40 E-value=6.8 Score=36.51 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=39.4
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC-----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS-----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L 109 (378)
..|. |.+.. ..+++.|+|. ..... .-.|.|+........... +....++|++|
T Consensus 107 ~pP~-v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-------------~~~~~~~i~~L 170 (414)
T 3se4_A 107 GPPE-VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE-------------NIYSRHKIYKL 170 (414)
T ss_dssp CCCE-EEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEE-------------EECSEEEECCC
T ss_pred CCCe-EEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEe-------------cCCcEEEEcCC
Confidence 3454 77663 3568999999 53221 135667665543211111 11234779999
Q ss_pred CCCCEEEEEeCc
Q 017051 110 EHDTVYFYRCGR 121 (378)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (378)
+|++.|.++|..
T Consensus 171 ~p~t~Y~~~V~A 182 (414)
T 3se4_A 171 SPETTYCLKVKA 182 (414)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCeEEEEEEE
Confidence 999999999863
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 378 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 3e-57 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 1e-31 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 6e-30 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 2e-15 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 2e-08 | |
| d1uf3a_ | 228 | d.159.1.6 (A:) Hypothetical protein TT1561 {Thermu | 3e-06 | |
| d3d03a1 | 271 | d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ | 9e-05 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 1e-04 | |
| d2yvta1 | 257 | d.159.1.6 (A:4-260) Uncharacterized protein Aq_195 | 0.002 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 187 bits (475), Expect = 3e-57
Identities = 103/246 (41%), Positives = 133/246 (54%), Gaps = 19/246 (7%)
Query: 136 PITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYAD----YMQHRWDTFGELV 189
P TF + GDLGQ+ + +TL H K L GDLSYAD + RWDT+G
Sbjct: 7 PYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFT 66
Query: 190 QPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAH 247
+ + +PW+ T GNHE E P I + F+ ++ R+ +P+E S S S +YS A AH
Sbjct: 67 ERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAH 126
Query: 248 LIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAI 307
+I+L SY+ Y + QY WLK +L KV R +TPWL+VL+H P YNS H EG+ M
Sbjct: 127 IIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTK 186
Query: 308 MEPLLYAASVDLVLAGHVHAYERSIRVNNGK-----------PDPCGAVYITIGDGGNKE 356
E VD+V AGHVHAYERS RV+N D VYITIGD GN
Sbjct: 187 FEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 246
Query: 357 GLARKY 362
+
Sbjct: 247 VIDSNM 252
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 113 bits (285), Expect = 1e-31
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 31 LEFPWDPKPSSH--PQQVHISLAGD--SHMRVTWITDDESSPSVVEYGTSPGGYNCGAEG 86
L+ P + PQQVHI+ M ++W+T DE S V Y + G A+G
Sbjct: 5 LDSDVFRVPPGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKG 64
Query: 87 ESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPP 132
+ ++YR+ Y SG IHHT I L+++T Y+Y G + F F TPP
Sbjct: 65 KMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 109 bits (273), Expect = 6e-30
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 27 PRRTLEFPWD------PKPSSHPQQVHISLAGD--SHMRVTWIT-DDESSPSVVEYGTSP 77
++ PWD P + PQQVHI+ + ++W T D++ + V Y +
Sbjct: 3 NAEDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSEN 62
Query: 78 GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQG--PEFEFKTPP 132
A G +Y+Y Y S IHH I LE+DT Y+YR G +F F TPP
Sbjct: 63 SKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 74.0 bits (180), Expect = 2e-15
Identities = 48/259 (18%), Positives = 75/259 (28%), Gaps = 44/259 (16%)
Query: 136 PITFAVAGDLG-----------QTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT 184
+ F GD G + K+ + D L GD Y + D
Sbjct: 4 ILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDK 63
Query: 185 ------FGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMP-----FEESGS 233
P PW V GNH+ A+ + RW P
Sbjct: 64 RFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKIP 123
Query: 234 NSNLYYSFDVAGAHLIMLGSYADYDEY----------SDQYRWLKDDLSKVDRKKTPWLL 283
SN+ + + + S + Q W+K L+ K ++L
Sbjct: 124 RSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA---AKEDYVL 180
Query: 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343
V H P ++ A G ++ + PLL V L GH H + D G
Sbjct: 181 VAGHYPVWSI--AEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQ-------DENG 231
Query: 344 AVYITIGDGGNKEGLARKY 362
++ G G + +
Sbjct: 232 LGFVLSGAGNFMDPSKKHL 250
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 53.2 bits (126), Expect = 2e-08
Identities = 34/252 (13%), Positives = 64/252 (25%), Gaps = 61/252 (24%)
Query: 152 KSTLDHIGQCKYDVHLLPGDLSYAD--YMQHRWDTFGELVQPLASAR-PWMVTQGNHEKE 208
+ + + + + GD+ ++ L + GNHE
Sbjct: 39 RDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFY 98
Query: 209 SIPLIMDAFQSYNARWKM----PFEESGSNSNLYYSFDVAGAHLIMLGSY---------- 254
+ N+ + + G + Y ++L +Y
Sbjct: 99 NFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEE 158
Query: 255 ------------------------------------ADYDEYSDQYRWLKDDLSKVDRKK 278
+ Q +WL L+ D K+
Sbjct: 159 SEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQ 218
Query: 279 TPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK 338
L + H+P + A++ L SV +AGH H R +
Sbjct: 219 ERVL-IFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSS--- 274
Query: 339 PDPCGAVYITIG 350
GA +IT+
Sbjct: 275 ----GAQHITLE 282
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Score = 45.5 bits (106), Expect = 3e-06
Identities = 17/178 (9%), Positives = 38/178 (21%), Gaps = 6/178 (3%)
Query: 155 LDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214
+ D L G+L D + P G + +
Sbjct: 25 VKLAPDTGADAIALIGNL--MPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEYLR 82
Query: 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKV 274
+A +M I + E W+ + K
Sbjct: 83 EAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKA 142
Query: 275 DRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSI 332
+ + + L ++ + +++ + LVL +
Sbjct: 143 LWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTH----NPLLVLVAGKGQKHEML 196
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Score = 41.2 bits (95), Expect = 9e-05
Identities = 21/171 (12%), Positives = 51/171 (29%), Gaps = 14/171 (8%)
Query: 162 KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYN 221
+ D ++ GD+ + +++ P + GNH+ + F Y
Sbjct: 41 RPDAVVVSGDIVN-CGRPEEYQVARQILGS--LNYPLYLIPGNHDDK------ALFLEYL 91
Query: 222 ARWKMPFEESGSNSNLYYSFDVAGAHLIMLG-SYADYDEYSDQYRWLKDDLSKVDRKKTP 280
+N+ + D L+ + S A + + +++
Sbjct: 92 QPLCPQL--GSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGGDK 149
Query: 281 WLLVLLHVPWYNSNEAH--QGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329
+ +H P A + ++ + S+ + GH H+
Sbjct: 150 PATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLT 200
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.0 bits (94), Expect = 1e-04
Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 15/181 (8%)
Query: 152 KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKES 209
L+ + Q + D + GDL+ R +
Sbjct: 33 GELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRK-----------LRGLVEPFAAQLGAE 81
Query: 210 IPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWL 267
+ +M K +E+ S + L + G +I+L + + +
Sbjct: 82 LVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLG 141
Query: 268 KDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327
+L L H P + + A + +L V +LAGH+H
Sbjct: 142 WLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHY 201
Query: 328 Y 328
Sbjct: 202 S 202
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Score = 37.4 bits (85), Expect = 0.002
Identities = 25/191 (13%), Positives = 55/191 (28%), Gaps = 11/191 (5%)
Query: 141 VAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200
V G++ + + + + + + + ++ F E+ V
Sbjct: 35 VVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFREI---GELGVKTFV 91
Query: 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEE--SGSNSNLYYSFDVAGAHLIMLGSYADYD 258
G ++ PL + +Y A P + F+V G ++ + D
Sbjct: 92 VPGKND---APLKIFLRAAYEAETAYPNIRVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148
Query: 259 EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAAS-- 316
RW + + K + P LV + + D +
Sbjct: 149 FVLKYPRWYVEYILKFVNELKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSL 208
Query: 317 -VDLVLAGHVH 326
++ + GHV
Sbjct: 209 NPEVAIVGHVG 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 99.97 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.92 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.89 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.89 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.88 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.87 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.78 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.76 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.44 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.44 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 99.41 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.37 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.32 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.29 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.99 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.74 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.62 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.5 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.04 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.89 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.83 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.77 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.76 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.76 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.74 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.71 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.61 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.6 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 97.6 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.59 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.59 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.59 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 97.57 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.54 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 97.54 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.52 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.48 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.48 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 97.47 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.47 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.45 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.44 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 97.43 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.43 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 97.42 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 97.41 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.4 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 97.4 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 97.39 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.39 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 97.39 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.39 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.38 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 97.37 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 97.33 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.33 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.3 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.27 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.27 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 97.26 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 97.24 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.22 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 97.21 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.21 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 97.2 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 97.2 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.19 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 97.16 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.13 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.12 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 97.11 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 97.06 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 97.03 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 96.98 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.96 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.95 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 96.92 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 96.9 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.87 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.82 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.82 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.76 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 96.75 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 96.74 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 96.69 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.59 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.54 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 96.43 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.39 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.37 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.31 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 96.3 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 96.28 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 96.26 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.24 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 96.06 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 95.89 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 95.82 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.77 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 94.91 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.59 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 94.25 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 93.95 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 93.54 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 93.4 | |
| d2cspa1 | 117 | Rim binding protein 2 {Human (Homo sapiens) [TaxId | 93.26 | |
| d3d85d3 | 94 | The p40 domain of interleukin-12 (IL-12 beta chain | 92.84 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 92.81 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 92.02 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 89.97 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 87.76 | |
| d1y6kr1 | 99 | Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa | 85.18 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=1e-46 Score=348.75 Aligned_cols=234 Identities=44% Similarity=0.728 Sum_probs=196.7
Q ss_pred CCCCCCCeEEEEEcccCCCCChHHHHHHh--hcCCCcEEEeccccccccch----hhhHHHHHHhhHhhhhCCceeecCC
Q 017051 130 TPPAQFPITFAVAGDLGQTGWTKSTLDHI--GQCKYDVHLLPGDLSYADYM----QHRWDTFGELVQPLASARPWMVTQG 203 (378)
Q Consensus 130 t~p~~~~~~f~~~gD~~~~~~~~~~~~~i--~~~~~d~vi~~GDl~~~~~~----~~~~~~~~~~~~~l~~~~P~~~v~G 203 (378)
|.| +.|+||+++||+|........+..+ ...+|||||++||++|+++. ..+|+.|++.++++...+|+++++|
T Consensus 2 ~g~-~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~G 80 (312)
T d2qfra2 2 TGL-DVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAG 80 (312)
T ss_dssp CCS-SCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCC
T ss_pred CCC-CCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecc
Confidence 445 5789999999998776655666553 46789999999999986543 5689999999999998899999999
Q ss_pred CCccCCCCc--ccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCe
Q 017051 204 NHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPW 281 (378)
Q Consensus 204 NHD~~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~ 281 (378)
|||+...+. ....+..|..+|.+|.+......+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|
T Consensus 81 NHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w 160 (312)
T d2qfra2 81 NHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPW 160 (312)
T ss_dssp GGGTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCE
T ss_pred cccccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCE
Confidence 999853322 124677888899999876666678899999999999999999888888899999999999988778899
Q ss_pred EEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCC-----------cCCCccEEEEeC
Q 017051 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK-----------PDPCGAVYITIG 350 (378)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~-----------~~~~g~~yiv~G 350 (378)
+||++|+|+|++..........+++.|+++|++++||++|+||+|.|+|++|+++++ .+++|++||++|
T Consensus 161 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G 240 (312)
T d2qfra2 161 LIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIG 240 (312)
T ss_dssp EEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEEC
T ss_pred EEEEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEEC
Confidence 999999999998766555666789999999999999999999999999999998765 246799999999
Q ss_pred CCCCCCCccccccc
Q 017051 351 DGGNKEGLARKYVL 364 (378)
Q Consensus 351 ~gG~~~~~~~~~~~ 364 (378)
+||+.++....+.+
T Consensus 241 ~gG~~~~~~~~~~~ 254 (312)
T d2qfra2 241 DAGNYGVIDSNMIQ 254 (312)
T ss_dssp CSCTTSCCCCCBCS
T ss_pred cCCCcccccccccC
Confidence 99987666555543
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=2.7e-30 Score=236.55 Aligned_cols=203 Identities=25% Similarity=0.366 Sum_probs=144.6
Q ss_pred CCeEEEEEcccCCCCCh-----------HHHHHHhhcCCCcEEEeccccccccch----hhhHHHHHHhh--HhhhhCCc
Q 017051 135 FPITFAVAGDLGQTGWT-----------KSTLDHIGQCKYDVHLLPGDLSYADYM----QHRWDTFGELV--QPLASARP 197 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~~-----------~~~~~~i~~~~~d~vi~~GDl~~~~~~----~~~~~~~~~~~--~~l~~~~P 197 (378)
..+||+++||+|..... ..+.+.+++.+|||||++||++|..+. ...|..+...+ ......+|
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~P 82 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVP 82 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTCC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCCc
Confidence 47999999999865432 123444557899999999999987553 33454433221 22345699
Q ss_pred eeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEe------CCEEEEEEcCcCC---------------
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV------AGAHLIMLGSYAD--------------- 256 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~------g~v~fi~ldt~~~--------------- 256 (378)
+++++||||+.........+..+..++.+| ..||++.+ ++++|+++|+...
T Consensus 83 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~~~~ 154 (302)
T d1utea_ 83 WHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERP 154 (302)
T ss_dssp EEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSC
T ss_pred eEEeecccccccccccccchhhccccccCC--------CcccceeecccCCCCcEEEEEccceeEeeccccccccccccc
Confidence 999999999854432112233333444444 34666654 3699999997310
Q ss_pred --CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecc
Q 017051 257 --YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRV 334 (378)
Q Consensus 257 --~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~ 334 (378)
.....+|++||++.|++. +.+|+|+++|+|+++.... +.....+..|.++|++++|+++||||+|.|+|..+
T Consensus 155 ~~~~~~~~Q~~WL~~~L~~~---~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~~~- 228 (302)
T d1utea_ 155 RNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQD- 228 (302)
T ss_dssp SCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEEEC-
T ss_pred ccchhHHHHHHHHHHHHHhh---ccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEEec-
Confidence 012468999999999986 4579999999999976542 33455789999999999999999999999999874
Q ss_pred cCCCcCCCccEEEEeCCCCCCCC
Q 017051 335 NNGKPDPCGAVYITIGDGGNKEG 357 (378)
Q Consensus 335 ~~~~~~~~g~~yiv~G~gG~~~~ 357 (378)
++++.||++|+||....
T Consensus 229 ------~~~~~~i~~g~g~~~~~ 245 (302)
T d1utea_ 229 ------ENGLGFVLSGAGNFMDP 245 (302)
T ss_dssp ------TTCCEEEEECBSSCCCC
T ss_pred ------CCccEEEEeCCCCCCCC
Confidence 46899999999987543
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=2.1e-24 Score=193.01 Aligned_cols=218 Identities=17% Similarity=0.174 Sum_probs=141.4
Q ss_pred CCeEEEEEcccCCCCC-------------hHHHHHHhh--cCCCcEEEeccccccccchhhhHHHHHHhhHhhhh--CCc
Q 017051 135 FPITFAVAGDLGQTGW-------------TKSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARP 197 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~-------------~~~~~~~i~--~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~--~~P 197 (378)
..+||+.++|+|.... .+++++.++ ..+|||||++||+++.+. ..+++.+.+.+.++.. .+|
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g~-~~~~~~~~~~l~~~~~~~~~p 81 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-PAAYRKLRGLVEPFAAQLGAE 81 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSCC-HHHHHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-hhHHHHHHHHhhhhhhhcCCC
Confidence 4799999999996432 133455554 358999999999997654 3556667666665543 489
Q ss_pred eeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC----CCcHHHHHHHHHHhhh
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSK 273 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~----~~~~~Q~~WL~~~L~~ 273 (378)
++.++||||.. ..+..+.... .......+|.+..++++|++|||.... ....+|++||++.|++
T Consensus 82 ~~~v~GNHD~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl~~~L~~ 149 (256)
T d2hy1a1 82 LVWVMGNHDDR------AELRKFLLDE------APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELAT 149 (256)
T ss_dssp EEECCCTTSCH------HHHHHHTTCC------CCCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHHHHHHTS
T ss_pred EEEEcccccch------hhhhhhhccc------cccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHHHHHHHh
Confidence 99999999962 1222221111 111235678899999999999985432 2347899999999987
Q ss_pred ccCCCCCeEEEEeccccccCCCCCC-CCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCC
Q 017051 274 VDRKKTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDG 352 (378)
Q Consensus 274 ~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~g 352 (378)
... +.+||++|+|++....... .......+.+.+++++++|+++||||.|...... .+|+.|+++|+.
T Consensus 150 ~~~---~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~--------~~gi~~~~~~s~ 218 (256)
T d2hy1a1 150 PAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVASAT 218 (256)
T ss_dssp CCT---TCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECCCC
T ss_pred hhc---cCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--------ECCEEEEEcCCc
Confidence 632 3478999999886543110 1111234788899999999999999999765432 247778877664
Q ss_pred CC-------CCCccccccccccCceeccccc
Q 017051 353 GN-------KEGLARKYVLTYRNIFELSNSN 376 (378)
Q Consensus 353 G~-------~~~~~~~~~~p~~~~~e~~~~~ 376 (378)
.. ..+....-..++++++++..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~~lv~v~~d~ 249 (256)
T d2hy1a1 219 CYTQDLTVAAGGTRGRDGAQGCNLVHVYPDT 249 (256)
T ss_dssp C-------------------CEEEEEECSSC
T ss_pred cccccccCCCCCcccccCCCCEEEEEEECCC
Confidence 21 1111112246788999886554
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.89 E-value=3.7e-23 Score=188.54 Aligned_cols=227 Identities=17% Similarity=0.103 Sum_probs=140.7
Q ss_pred CeEEEEEcccCCCCC--------------------hHHHHHHhhcCCCcEEEeccccccccch--hhhHHHHHHhhHhhh
Q 017051 136 PITFAVAGDLGQTGW--------------------TKSTLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLA 193 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~--------------------~~~~~~~i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~ 193 (378)
-|||++++|+|.+.. ..++++.+++.+|||||++||+++.... ......+....+.+.
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~~~DfVv~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAELD 82 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhCCCCEEEECCCCCCCCCcchhHHHHHHHHHHHHHH
Confidence 399999999996521 1234556678899999999999975432 111222223333332
Q ss_pred h-CCceeecCCCCccCCCCcccchhhhchh--cc--cCCCCCCCCCCCceEEEEeCCEEEEEEcCcCC------------
Q 017051 194 S-ARPWMVTQGNHEKESIPLIMDAFQSYNA--RW--KMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD------------ 256 (378)
Q Consensus 194 ~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~--~~--~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~------------ 256 (378)
. .+|+++++||||................ ++ ..............+....++.+|+.+++...
T Consensus 83 ~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (320)
T d2nxfa1 83 ACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKH 162 (320)
T ss_dssp TTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHH
T ss_pred HcCCCEEEecccCccccccchhcccccccchhhhcccccccccCCCCccceeecCCCeEEEEecCccccccccccccccc
Confidence 2 4999999999998432110000000000 00 00000111122455677889999999986310
Q ss_pred ----------------------------------CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCch
Q 017051 257 ----------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGD 302 (378)
Q Consensus 257 ----------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~ 302 (378)
...+.+|++||++.|+++++ +..++|+++|+|++......... .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~~-~~~~viv~~H~p~~~~~~~~~~~-~ 240 (320)
T d2nxfa1 163 THSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPVHPCAADPICL-A 240 (320)
T ss_dssp HHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCCCTTSSCGGGS-C
T ss_pred ccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhhh-cCCceEEEECCCCccCCCCCccc-h
Confidence 01247899999999998755 33568999999987654432111 1
Q ss_pred HHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccccc
Q 017051 303 GMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSNSN 376 (378)
Q Consensus 303 ~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~~~ 376 (378)
...+++.++|.++ +|+++|+||+|..++... .+|+.||+.|+.... ....+.|+++++.+++
T Consensus 241 ~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~~-------~~g~~~i~~~~~~~~-----~~~~~~~~~~~v~~d~ 303 (320)
T d2nxfa1 241 WNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVIET-----PPHSHAFATAYLYEDR 303 (320)
T ss_dssp TTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGGGC-----CTTSCEEEEEEECSSE
T ss_pred hhHHHHHHHHHhCCCeeEEEeCCcCCcCeeec-------cCCCEEEECCeeecC-----CCCCCCEEEEEEECCE
Confidence 2357899999999 599999999998765542 368889987753221 2345788899886543
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.89 E-value=1e-22 Score=183.57 Aligned_cols=194 Identities=15% Similarity=0.197 Sum_probs=128.9
Q ss_pred eEEEEEcccCCCCC-------------hHHHHHHhh--cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeec
Q 017051 137 ITFAVAGDLGQTGW-------------TKSTLDHIG--QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (378)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~~~~i~--~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v 201 (378)
++|+.++|+|.... .+++++.++ ..+||+||++||+++.+. ...++.+.+.++++ .+|++++
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~~-~~~y~~~~~~l~~l--~~p~~~i 77 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-PEEYQVARQILGSL--NYPLYLI 77 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-HHHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCCc-chhHHHHHHHHhcc--CCCEEEE
Confidence 58999999996421 123455554 468999999999998554 34566666666555 3899999
Q ss_pred CCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC----CCcHHHHHHHHHHhhhccCC
Q 017051 202 QGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVDRK 277 (378)
Q Consensus 202 ~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~----~~~~~Q~~WL~~~L~~~~~~ 277 (378)
+||||.. ..+..+...+. +. .........|.++.+++++|+||+.... ....+|++||++.|++..
T Consensus 78 ~GNHD~~------~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~L~~~~-- 147 (271)
T d3d03a1 78 PGNHDDK------ALFLEYLQPLC-PQ-LGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG-- 147 (271)
T ss_dssp CCTTSCH------HHHHHHHGGGS-GG-GCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHT--
T ss_pred ecCccch------HHHHHHhhhhh-hc-cccccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHHHhhhc--
Confidence 9999983 12222221110 10 0011234567788889999999996432 235799999999999863
Q ss_pred CCCeEEEEeccccccCCCCCCCC-chHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCC
Q 017051 278 KTPWLLVLLHVPWYNSNEAHQGE-GDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDG 352 (378)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~-~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~g 352 (378)
+ +++||++|||++......... .....+.+.++++++ +|+++||||.|...... + +|+.++++.+.
T Consensus 148 ~-~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--~------~g~~~~~~pst 215 (271)
T d3d03a1 148 D-KPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--Y------RQALISTLPGT 215 (271)
T ss_dssp T-SCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE--E------TTEEEEECCCS
T ss_pred c-ceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhceE--E------CCEEEEEcCCc
Confidence 2 347888999987655432211 112347899999998 69999999999765543 1 46766665443
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.88 E-value=3.7e-22 Score=153.99 Aligned_cols=95 Identities=39% Similarity=0.666 Sum_probs=82.6
Q ss_pred CCCCCCceEEEEecC--CCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 38 ~~~~~p~~v~l~~~~--~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
+...+|+||||++++ +++|+|+|+|.+.+..+.|+||.+++.+...+.+.+..+.......+++|+|+|+||+|||.|
T Consensus 14 ~~~~~P~qvhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y 93 (112)
T d2qfra1 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (112)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCccEEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEE
Confidence 456789999999987 689999999987778899999999988888888887666554456789999999999999999
Q ss_pred EEEeCcc--CceeEEECCC
Q 017051 116 FYRCGRQ--GPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~~--s~~~~F~t~p 132 (378)
+|||+.. |++++|+|+|
T Consensus 94 ~YrVG~~~~S~~~~F~T~P 112 (112)
T d2qfra1 94 YYEVGLRNTTRRFSFITPP 112 (112)
T ss_dssp EEEECCSSSCEEEEEECCC
T ss_pred EEEECCCCceeeEEEEcCC
Confidence 9999874 8999999987
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.87 E-value=3.7e-22 Score=155.76 Aligned_cols=104 Identities=35% Similarity=0.590 Sum_probs=86.0
Q ss_pred CCcccCCCC------CCCCCCceEEEEecC--CCeEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccC
Q 017051 29 RTLEFPWDP------KPSSHPQQVHISLAG--DSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSG 99 (378)
Q Consensus 29 ~~~~~~~~~------~~~~~p~~v~l~~~~--~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (378)
.++++|+.+ +....|+||||++++ +++|+|+|+|... .+.+.|+||.+++.+...+.|.+..+.......+
T Consensus 5 ~~~~~p~~~~~~~~p~~~~~P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~ 84 (119)
T d1xzwa1 5 EDVDMPWDSDVFAVPSGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSA 84 (119)
T ss_dssp HHHBCCTTCGGGCCCCSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECC
T ss_pred cccccCCCCccccCCCCCCCCCEEEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCC
Confidence 345666666 345789999999997 6899999999543 3567999999998888888888766655445678
Q ss_pred eEEEEEECCCCCCCEEEEEeCcc--CceeEEECCC
Q 017051 100 KIHHTVIGPLEHDTVYFYRCGRQ--GPEFEFKTPP 132 (378)
Q Consensus 100 ~~h~~~l~~L~p~t~Y~Y~v~~~--s~~~~F~t~p 132 (378)
++|+|+|+||+|||+|+|||++. |++++|+|+|
T Consensus 85 ~~H~v~LtgL~P~T~Y~YrVG~~~~S~~~~F~T~P 119 (119)
T d1xzwa1 85 FIHHCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119 (119)
T ss_dssp EEEEEEECCCCTTCEEEEEECCGGGCEEEEEECCC
T ss_pred eEEEEEECCCCCCCEEEEEECCCCccceEEEeCCC
Confidence 99999999999999999999874 8999999997
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.78 E-value=5.2e-19 Score=153.86 Aligned_cols=205 Identities=12% Similarity=-0.009 Sum_probs=127.6
Q ss_pred CeEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 136 PITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 136 ~~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
.-+|+++||+|.+. ..+++++.+.+.++|+||++||+++.+....++..+.+.+..+ .+|+++++||||......
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~--~~pv~~i~GNHD~~~~~~-- 80 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIWEY-- 80 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHHHH--
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhccc--cceEEEEecCCCchhhhh--
Confidence 45678999998653 2345666667789999999999997665544555555544443 489999999999732111
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCC----------CCCcHHHHHHHHHHhhhccCCCCCeEEE
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYAD----------YDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~----------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (378)
....+......+. .......+.+..+++.++.++.... ......+..|+++.++.... ...|+
T Consensus 81 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~il 153 (228)
T d1uf3a_ 81 -LREAANVELVHPE---MRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD---YPKIF 153 (228)
T ss_dssp -HHHHHHHHHHCTT---EEECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS---CCEEE
T ss_pred -hhhhccccccccc---ccccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhccC---CceEE
Confidence 0000110000000 0001233556778888888876211 11246788999888877532 34799
Q ss_pred EeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccc
Q 017051 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVL 364 (378)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~ 364 (378)
++|+|++....... ....+.++++++++++++|||+|..... . .++.++.+|+.+ .
T Consensus 154 ~~H~p~~~~~~~~~-----~~~~~~~~~~~~~~~lvl~GH~H~~~~~---~------g~~~~v~pG~~~----------~ 209 (228)
T d1uf3a_ 154 LFHTMPYHKGLNEQ-----GSHEVAHLIKTHNPLLVLVAGKGQKHEM---L------GASWVVVPGDLS----------E 209 (228)
T ss_dssp EESSCBCBTTTBTT-----SBHHHHHHHHHHCCSEEEECCSSCEEEE---E------TTEEEEECCBGG----------G
T ss_pred EEeeeccCcccccc-----ccHHHHHHHHhcCCcEEEEcccccchhc---c------CCEEEEECCccc----------c
Confidence 99999876543322 2256788899999999999999964321 1 345556555432 2
Q ss_pred cccCceecccc
Q 017051 365 TYRNIFELSNS 375 (378)
Q Consensus 365 p~~~~~e~~~~ 375 (378)
..|.+++++..
T Consensus 210 g~y~~i~~~~~ 220 (228)
T d1uf3a_ 210 GEYSLLDLRAR 220 (228)
T ss_dssp TEEEEEETTTT
T ss_pred ceEEEEEccCC
Confidence 45777777643
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.76 E-value=3.7e-18 Score=150.91 Aligned_cols=211 Identities=10% Similarity=0.074 Sum_probs=123.4
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHH-----------------------HHHhhHh
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDT-----------------------FGELVQP 191 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~-----------------------~~~~~~~ 191 (378)
+.||+++||+|.... .+++++.+.+.+||+||++||+++.......|.. +...++.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~~~~D~vli~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~~~~~~ 81 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 81 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhhcCCCEEEEecccCCCCCCCHHHHHHHHhhhhhceeeeccccccchhhHHHHHHH
Confidence 579999999996533 3566677778999999999999976544332221 1223334
Q ss_pred hhh-CCceeecCCCCccCCCCcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCC-------C--CcH
Q 017051 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-------D--EYS 261 (378)
Q Consensus 192 l~~-~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~-------~--~~~ 261 (378)
+.. .+|+++++||||..... .....+......+. .......+.+..+++.++.+++.... . ...
T Consensus 82 L~~~~~pv~~i~GNHD~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T d2yvta1 82 IGELGVKTFVVPGKNDAPLKI---FLRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYPR 155 (257)
T ss_dssp HHTTCSEEEEECCTTSCCHHH---HHHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEEH
T ss_pred HHhcCCcEEEEeCCCcchhhH---HHHHhccccccccc---cccccceeEEecCCeEEEEeccccCCccccchhhhhhhh
Confidence 433 38999999999973211 11111111111110 00112334455677888887653211 1 113
Q ss_pred HHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCC--chHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCc
Q 017051 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGE--GDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKP 339 (378)
Q Consensus 262 ~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~ 339 (378)
.+..|++..++.. +...+|+++|+|++.+....... .......+.+++++++++++++||.|.....
T Consensus 156 ~~~~~~~~~~~~~---~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~~~~-------- 224 (257)
T d2yvta1 156 WYVEYILKFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL-------- 224 (257)
T ss_dssp HHHHHHGGGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE--------
T ss_pred hHHHHHHHHhhhc---ccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCCeEe--------
Confidence 3334555544443 33458999999997654322111 1123478889999999999999999964321
Q ss_pred CCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 340 DPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 340 ~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
.++++++.+|+- .+.+|.++++.+
T Consensus 225 -~g~~~~~~pGs~----------~~g~y~~id~~~ 248 (257)
T d2yvta1 225 -VGNTIVVNPGEF----------EEGRYAFLDLTQ 248 (257)
T ss_dssp -ETTEEEEECCBG----------GGTEEEEEETTT
T ss_pred -cCCeEEEECCcc----------ccCEEEEEEEeC
Confidence 146666766632 234566777654
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.44 E-value=1.9e-12 Score=109.31 Aligned_cols=161 Identities=13% Similarity=0.161 Sum_probs=99.1
Q ss_pred EEEEcccCCCCCh----HHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 139 FAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 139 f~~~gD~~~~~~~----~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
++++||+|..... ....+.+...++|.||++||++.. . ..+.++.+. .++++|+||||......
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~~~vD~ii~~GDi~~~----~----~l~~l~~l~--~~v~~V~GN~D~~~~~~-- 73 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ----E----YVEMLKNIT--KNVYIVSGDLDSAIFNP-- 73 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH----H----HHHHHHHHC--SCEEECCCTTCCSCCBC--
T ss_pred EEEEeCCCCCcccchhhHHHHHHhccCCCCEEEECCCCCCH----H----HHHHHHhhC--CCEEEEcCCCCcchhhh--
Confidence 7899999964321 234444557789999999999841 1 122333332 46889999999842211
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCC
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (378)
-..+... .| ..-.+.+++ ++|.+.|...+...
T Consensus 74 --~~~~~~~--lp---------~~~~~~~~~-----------------------------------~~i~l~H~~~~~~~ 105 (193)
T d2a22a1 74 --DPESNGV--FP---------EYVVVQIGE-----------------------------------FKIGLMHGNQVLPW 105 (193)
T ss_dssp --CGGGTBC--CC---------SEEEEEETT-----------------------------------EEEEEECSTTSSST
T ss_pred --hHHHHhh--CC---------ccEEEEECC-----------------------------------EEEEEEeccCCCCC
Confidence 0111111 11 222233332 35566665433221
Q ss_pred CCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
. ..+.+..++.+.++|++++||+|...... .+|+++|..|+-|.+....+.-..|.|.+++++.
T Consensus 106 ~--------~~~~l~~~~~~~~~dvvi~GHTH~~~~~~--------~~g~~~iNPGSvg~pr~~~~~~~~~syaild~~~ 169 (193)
T d2a22a1 106 D--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFSALTPDAPPSFMLMALQG 169 (193)
T ss_dssp T--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCCTTSTTCCCEEEEEEEET
T ss_pred C--------CHHHHHHHHhhcCCCEEEEcCccCceEEE--------ECCEEEEECCCCCcCcCCCCCCCCCEEEEEEEEC
Confidence 1 12567778888999999999999864332 2588999999987665434445567899999875
Q ss_pred c
Q 017051 375 S 375 (378)
Q Consensus 375 ~ 375 (378)
.
T Consensus 170 ~ 170 (193)
T d2a22a1 170 N 170 (193)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.44 E-value=1.4e-12 Score=108.86 Aligned_cols=154 Identities=18% Similarity=0.225 Sum_probs=98.9
Q ss_pred eEEEEEcccCCCCCh---HHHHHH-hhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCc
Q 017051 137 ITFAVAGDLGQTGWT---KSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~---~~~~~~-i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~ 212 (378)
++++++||+|..... .+.+.+ ++..++|.|+|+||++. ... .+.++.+. .|+++|.||||...
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~~~~D~Ii~~GDi~~----~e~----l~~l~~~~--~~v~~V~GN~D~~~--- 67 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCT----KES----YDYLKTLA--GDVHIVRGDFDENL--- 67 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBS----HHH----HHHHHHHC--SEEEECCCTTCCCT---
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcccCCCEEEEccCccc----hhh----HHHHHhhC--CceEEEeCCcCccc---
Confidence 589999999964321 234444 44568999999999983 111 22333332 57899999999731
Q ss_pred ccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecccccc
Q 017051 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (378)
Q Consensus 213 ~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (378)
..|. .-.+.++ .++|.+.|.+.+.
T Consensus 68 ------------~~p~---------~~~~~~~-----------------------------------g~~i~~~Hg~~~~ 91 (182)
T d1z2wa1 68 ------------NYPE---------QKVVTVG-----------------------------------QFKIGLIHGHQVI 91 (182)
T ss_dssp ------------TSCS---------EEEEEET-----------------------------------TEEEEEECSCCCC
T ss_pred ------------ccce---------EEEEEEc-----------------------------------CcEEEEEeCCCCC
Confidence 1121 1111111 1357777766543
Q ss_pred CCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceec
Q 017051 293 SNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFEL 372 (378)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~ 372 (378)
... ..+.+..++++.++|++++||+|...... .+++++|..|+-|.+.+.......|.|.++++
T Consensus 92 ~~~--------~~~~l~~~~~~~~~divi~GHTH~p~~~~--------~~~~~~iNPGSv~~pr~~~~~~~~~syaild~ 155 (182)
T d1z2wa1 92 PWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYNALETNIIPSFVLMDI 155 (182)
T ss_dssp BTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCCSSCSCCCCEEEEEEE
T ss_pred CCC--------CHHHHHHHHhccCCCEEEECCcCcceEEE--------ECCEEEEeCCCCCCCCCCCCCCCCCEEEEEEE
Confidence 221 12566677788899999999999854332 25899999999887755444456678999988
Q ss_pred ccc
Q 017051 373 SNS 375 (378)
Q Consensus 373 ~~~ 375 (378)
+..
T Consensus 156 ~~~ 158 (182)
T d1z2wa1 156 QAS 158 (182)
T ss_dssp ETT
T ss_pred eCC
Confidence 754
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=99.41 E-value=8.8e-13 Score=108.62 Aligned_cols=157 Identities=13% Similarity=0.146 Sum_probs=97.0
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCcccc
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMD 215 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~~ 215 (378)
+|++++||+|... ..+++++.+++.++|.|+++||++.. ...+ .+..+ ..|++.+.||||...... ..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~~~D~ii~~GD~~~~----~~~~----~l~~~--~~~~~~v~GN~D~~~~~~-~~ 69 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL----FVIK----EFENL--NANIIATYGNNDGERCKL-KE 69 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST----HHHH----HGGGC--SSEEEEECCTTCCCHHHH-HH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEECCCccCH----HHHH----HHhhc--CccEEEEcccccccchhh-hH
Confidence 5899999999552 23567777788899999999999842 1111 12222 379999999999842100 00
Q ss_pred hhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCC
Q 017051 216 AFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE 295 (378)
Q Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 295 (378)
...........| ....+.++ ...|+++|.+++
T Consensus 70 ~~~~~~~~~~~~---------~~~~~~~~-----------------------------------~~~i~l~Hg~~~---- 101 (165)
T d1s3la_ 70 WLKDINEENIID---------DFISVEID-----------------------------------DLKFFITHGHHQ---- 101 (165)
T ss_dssp HHHHHCTTCEEE---------SEEEEEET-----------------------------------TEEEEEEESCCH----
T ss_pred hhhhhcccccCC---------hhhceEEC-----------------------------------CcEEEEEECCcc----
Confidence 000000000000 11111111 136788887643
Q ss_pred CCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceecccc
Q 017051 296 AHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSNS 375 (378)
Q Consensus 296 ~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~~ 375 (378)
..+..+++..++|++++||+|...... .++++++..|+-|.+.. ..|.|.++++++.
T Consensus 102 ----------~~~~~~~~~~~~d~v~~GHtH~~~~~~--------~~~~~~iNPGSvg~p~~-----~~~s~~ild~~~~ 158 (165)
T d1s3la_ 102 ----------SVLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECCGYLT-----GIPTIGILDTEKK 158 (165)
T ss_dssp ----------HHHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSSCTTT-----SCCEEEEEETTTT
T ss_pred ----------cHHHHHhhcCCCCEEEECCcCcceEEE--------ECCEEEEECCCCCCCCC-----CCCEEEEEEccCC
Confidence 345567788899999999999843222 25889999998876543 2578999998764
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.37 E-value=1.2e-12 Score=114.77 Aligned_cols=205 Identities=10% Similarity=-0.007 Sum_probs=104.6
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhh-----cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIG-----QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~-----~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
++|+++||+|... ..+++++.+. ..++|.||++||+++.+.. -.+..+.+..+....++++++||||....
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~~---~~evi~~l~~l~~~~~v~~v~GNHD~~~~ 77 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPY---PKEVIEVIKDLTKKENVKIIRGKYDQIIA 77 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSC---HHHHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCCC---cHHHHHHHHHHhhcCCEEEEeccHHHHHH
Confidence 5899999999442 1245555553 2467999999999976542 23334555555555689999999997210
Q ss_pred CcccchhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEecccc
Q 017051 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (378)
.+......+.... .... .+.... .++ ........++.+|+++...........-.+++.|.++
T Consensus 78 --------~~~~~~~~~~~~~----~~~~---~~~~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~H~~p 140 (251)
T d1nnwa_ 78 --------MSDPHATDPGYID----KLEL---PGHVKK-ALK-FTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSP 140 (251)
T ss_dssp --------HSCTTCSSSGGGG----GSSC---CHHHHH-HHH-HHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESSCS
T ss_pred --------hccccccccchhh----hhcc---chhHHH-hhH-HHhhhcCHHHHHHHHhcccceEEeeCCCcEEEEecCc
Confidence 0000000000000 0000 000000 000 0000012345566654333221111123678889887
Q ss_pred ccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCc
Q 017051 291 YNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNI 369 (378)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~ 369 (378)
............ ....+...+... +++++++||+|.-.... .++..++.+|+-|.+.. .-..+.|.+
T Consensus 141 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vv~GHtH~~~~~~--------~~~~~~in~Gsvg~~~~---g~~~~~y~i 208 (251)
T d1nnwa_ 141 INPFDGEVLAEQ-PTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFPPG---KEHKATFAL 208 (251)
T ss_dssp SCTTTCCCCSSC-CHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSCSS---SSCCEEEEE
T ss_pred cCcccchhhhhh-HHHHHhhhcccccCceEEEEeccceEEEEE--------eeeeeccccccccccCC---CCCCCeEEE
Confidence 654433222111 123333334433 68999999999743332 25788899998877632 112356777
Q ss_pred eecc
Q 017051 370 FELS 373 (378)
Q Consensus 370 ~e~~ 373 (378)
+|++
T Consensus 209 ~d~~ 212 (251)
T d1nnwa_ 209 VDVD 212 (251)
T ss_dssp EETT
T ss_pred EEcC
Confidence 7764
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.32 E-value=3.5e-11 Score=99.44 Aligned_cols=147 Identities=15% Similarity=0.118 Sum_probs=94.7
Q ss_pred CeEEEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCccCCCCccc
Q 017051 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~~~~~ 214 (378)
..||+++||+|.... .+++++.+ ..++|.|+++||+++..... + ..++.+|.||||...
T Consensus 3 ~~kI~viSD~Hgn~~al~~vl~~~-~~~~D~iih~GD~~~~~~~~------------~--~~~~~~V~GN~D~~~----- 62 (173)
T d3ck2a1 3 KQTIIVMSDSHGDSLIVEEVRDRY-VGKVDAVFHNGDSELRPDSP------------L--WEGIRVVKGNMDFYA----- 62 (173)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHH-TTTSSEEEECSCCCSCTTCG------------G--GTTEEECCCTTCCST-----
T ss_pred CCEEEEEeccCCCHHHHHHHHHHh-hcCCCEEEECCcccCcccch------------h--hcCCeEEecCccccc-----
Confidence 579999999995421 23344333 45799999999998643211 1 147889999999831
Q ss_pred chhhhchhcccCCCCCCCCCCCceEEEEeCCEEEEEEcCcCCCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCC
Q 017051 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (378)
Q Consensus 215 ~~~~~~~~~~~~p~~~~~~~~~~~ysf~~g~v~fi~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (378)
..|. ...+.+++ ..|.+.|..++...
T Consensus 63 ----------~~~~---------~~~~~~~~-----------------------------------~~~~~~Hg~~~~~~ 88 (173)
T d3ck2a1 63 ----------GYPE---------RLVTELGS-----------------------------------TKIIQTHGHLFDIN 88 (173)
T ss_dssp ----------TCCS---------EEEEEETT-----------------------------------EEEEEECSGGGTTT
T ss_pred ----------ccce---------EEEEEECC-----------------------------------EEEEEEeCcCCCCC
Confidence 0111 11122221 35677776555432
Q ss_pred CCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEEeCCCCCCCCccccccccccCceeccc
Q 017051 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYVLTYRNIFELSN 374 (378)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv~G~gG~~~~~~~~~~~p~~~~~e~~~ 374 (378)
.. ...+..++.+.++|++++||+|...... .+++++|..|+-|.+. .....+.|.++|+++
T Consensus 89 ~~--------~~~l~~~~~~~~~dvvi~GHTH~p~~~~--------~~~~~~iNPGSvg~pr---~~~~~~syail~~~~ 149 (173)
T d3ck2a1 89 FN--------FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPR---GTIRECLYARVEIDD 149 (173)
T ss_dssp TC--------SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCC---TTCCSCCEEEEEECS
T ss_pred CC--------HHHHHHHHHhcCCCEEEeCCcCcceEEE--------ECCEEEEECCCCCCCC---CCCCCCEEEEEEEeC
Confidence 21 1456677788899999999999854433 2589999999988763 223456788888865
Q ss_pred c
Q 017051 375 S 375 (378)
Q Consensus 375 ~ 375 (378)
.
T Consensus 150 ~ 150 (173)
T d3ck2a1 150 S 150 (173)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.29 E-value=2.2e-12 Score=117.51 Aligned_cols=73 Identities=23% Similarity=0.219 Sum_probs=51.7
Q ss_pred eEEEEEcccCCCCCh--------------HHHHHHhhcCCCcEEEeccccccccch-hhhHHHHHHhhHhhhhC-Cceee
Q 017051 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLASA-RPWMV 200 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~~~~i~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~~~~~l~~~-~P~~~ 200 (378)
+||+.+||+|.+... ..+++.+.+.++|+||++||+++.... ......+...++.+... +|++.
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 80 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHhhHHhcCCcEEE
Confidence 589999999975431 123444457899999999999875432 23344455666666543 99999
Q ss_pred cCCCCccCC
Q 017051 201 TQGNHEKES 209 (378)
Q Consensus 201 v~GNHD~~~ 209 (378)
++||||...
T Consensus 81 i~GNHD~~~ 89 (333)
T d1ii7a_ 81 IEGNHDRTQ 89 (333)
T ss_dssp ECCTTTCCS
T ss_pred eCCCCcccc
Confidence 999999853
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=1.3e-09 Score=90.65 Aligned_cols=69 Identities=16% Similarity=0.129 Sum_probs=46.0
Q ss_pred eEEEEEcccCCCC-ChHHHHHHhhcCCCcEEEeccccccccch-----hhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 137 ITFAVAGDLGQTG-WTKSTLDHIGQCKYDVHLLPGDLSYADYM-----QHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 137 ~~f~~~gD~~~~~-~~~~~~~~i~~~~~d~vi~~GDl~~~~~~-----~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
+|++++||+|... ..+++++.+.+.++|.||++||++..+.. ..........+..+ ..|++.+.||||.
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~GNhD~ 76 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AHKVIAVRGNCDS 76 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GGGEEECCCTTCC
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhcCCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--CCcEEEecCCCCc
Confidence 6899999999542 23456666677899999999999864332 11112222222222 2689999999998
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.74 E-value=9.9e-08 Score=79.23 Aligned_cols=45 Identities=20% Similarity=0.345 Sum_probs=34.0
Q ss_pred EEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 282 LLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 282 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
.|+++|.|+....... .......+.....+.+++++|+||+|...
T Consensus 108 ~i~l~H~P~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 108 RILLSHYPAKDPITER---YPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp EEEEESSCSSCSSCCS---CHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEEeCCCccccccc---cccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 7999999986544321 12345777888999999999999999754
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.62 E-value=2.4e-07 Score=84.14 Aligned_cols=184 Identities=17% Similarity=0.186 Sum_probs=92.8
Q ss_pred CeEEEEEcccCCCCC-----------hHHHHHHh----hcCCCc-EEEeccccccccchhh--hHHHHHHhhHhhhhCCc
Q 017051 136 PITFAVAGDLGQTGW-----------TKSTLDHI----GQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPLASARP 197 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~-----------~~~~~~~i----~~~~~d-~vi~~GDl~~~~~~~~--~~~~~~~~~~~l~~~~P 197 (378)
.++|+.++|+|..-. ....++++ .+.+++ +++.+||+........ ......+.+..+. .
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s~~~~g~~~~~~mn~~g---~ 84 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG---Y 84 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHHT---C
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHHHHhCChHHHHHHHhcC---C
Confidence 478899999984211 11233333 345666 5566999985432211 1122233333332 2
Q ss_pred eeecCCCCccCCCCcccchhhhchhcccCCC---C----CCC-CCCCceEEEEeCCEEE--EEEcCcC-------C----
Q 017051 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAGAHL--IMLGSYA-------D---- 256 (378)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~----~~~-~~~~~~ysf~~g~v~f--i~ldt~~-------~---- 256 (378)
=..++||||+.... +.+..+......|. + ..+ ..-..|.-++.+++++ |++-+.. .
T Consensus 85 Da~~~GNHEfd~G~---~~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~~~~~ 161 (337)
T d1usha2 85 DAMAIGNHEFDNPL---TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTD 161 (337)
T ss_dssp CEEECCGGGGSSCH---HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCCCTT
T ss_pred eEEEechhhhccch---HHHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcccccC
Confidence 24678999996432 22333333333331 0 001 1124566678888654 6664311 0
Q ss_pred --CCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccc
Q 017051 257 --YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (378)
Q Consensus 257 --~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 329 (378)
+....+..+...+.|++. ++...+|+++|.+............ ....+...+...+||+++.||+|...
T Consensus 162 ~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~~~~~--~~~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 162 IEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHGSNAP--GDVEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp EEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCTTSCC--CHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred cccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccccccc--hhHHHHHhCcccCceEEecCccCccc
Confidence 011123333333344433 2567899999998754332111111 12344444445589999999999753
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=98.50 E-value=7.4e-07 Score=80.31 Aligned_cols=183 Identities=16% Similarity=0.202 Sum_probs=88.7
Q ss_pred CCCeEEEEEcccCCCCC--------------hHHHHHHh----hcCCCc-EEEeccccccccchhhhHHHHHHhhHhhhh
Q 017051 134 QFPITFAVAGDLGQTGW--------------TKSTLDHI----GQCKYD-VHLLPGDLSYADYMQHRWDTFGELVQPLAS 194 (378)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~~~~i----~~~~~d-~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~ 194 (378)
-+.++|+..+|+|..-. ..+....+ ++.+++ +++.+||+............-...+-+++.
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~mn 88 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 88 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHhcCCCEEEEECCccCCCCchhhhcccCChHHHHHHh
Confidence 46799999999984210 01122222 345677 556799999753321100000112233444
Q ss_pred CCce-eecCCCCccCCCCcccchhhhchhcccCCC---C-----CCC---CCCCceEEEEeC--CEEEEEEcCcCCCCC-
Q 017051 195 ARPW-MVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----ESG---SNSNLYYSFDVA--GAHLIMLGSYADYDE- 259 (378)
Q Consensus 195 ~~P~-~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~-----~~~---~~~~~~ysf~~g--~v~fi~ldt~~~~~~- 259 (378)
.+++ ..++||||++........+....+.+..|. | ..+ .....|..+..+ ++.++++........
T Consensus 89 ~lgyDa~t~GNHEfd~g~~~l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~~~~~~~~ 168 (322)
T d3c9fa2 89 KQDYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRF 168 (322)
T ss_dssp TSCCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCC
T ss_pred ccCCcEEeecceecccchHHHHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEeeccccccC
Confidence 4555 678999999543221111111122222222 1 001 112345556655 588888765322211
Q ss_pred --c---HHHH-----HHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CC-cEEEecCccc
Q 017051 260 --Y---SDQY-----RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SV-DLVLAGHVHA 327 (378)
Q Consensus 260 --~---~~Q~-----~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~v-dlvl~GH~H~ 327 (378)
+ .... .|++..++ ++...+|+++|.++-... .........+-+.. ++ +++|.||+|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~-------~~~~~~~~~la~~~~~~~~~iigGHsH~ 237 (322)
T d3c9fa2 169 NSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW-------GEFYQVHQYLRQFFPDTIIQYFGGHSHI 237 (322)
T ss_dssp CTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT-------CHHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred CCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc-------cccchHHHHHHHhCCCCCEEEecccccc
Confidence 0 1112 34443332 356779999998753221 11112222222333 34 4689999996
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=98.04 E-value=0.0001 Score=65.23 Aligned_cols=170 Identities=16% Similarity=0.124 Sum_probs=87.4
Q ss_pred CeEEEEEcccCCCCC------------------hHHHHHHhhcCCC-cEEEeccccccccchhhhH---HHHHHhhHhhh
Q 017051 136 PITFAVAGDLGQTGW------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRW---DTFGELVQPLA 193 (378)
Q Consensus 136 ~~~f~~~gD~~~~~~------------------~~~~~~~i~~~~~-d~vi~~GDl~~~~~~~~~~---~~~~~~~~~l~ 193 (378)
.++|+..+|+|..-. ....++++.+.++ -+++-+||+...... ..+ ....+.+..+
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~~~~~l~ldaGD~~~Gs~~-~~~~~g~~~~~~~n~~- 79 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLY-FNQYRGLADRYFMHRL- 79 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHT-
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHhCCCeEEEEcCCCCCCCHh-HhhhcchhHHHHHHhc-
Confidence 368889999974310 1234555554444 478899999864432 111 1112222222
Q ss_pred hCCceeecCCCCccCCCCcccchhhhchhcccCCC---C-------CCCCCCCceEEEEeCCEEEEEEc--CcC------
Q 017051 194 SARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-------ESGSNSNLYYSFDVAGAHLIMLG--SYA------ 255 (378)
Q Consensus 194 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~p~---~-------~~~~~~~~~ysf~~g~v~fi~ld--t~~------ 255 (378)
-.=..++||||+..... .+..+......|. | .....-..|...+.+++++-++. +..
T Consensus 80 --gyDa~~~GNHEfd~G~~---~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~~~~~ 154 (302)
T d2z1aa2 80 --RYRAMALGNHEFDLGPG---PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISN 154 (302)
T ss_dssp --TCCEEECCGGGGTTCHH---HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSC
T ss_pred --ccccccccchhhhcChh---HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccccccc
Confidence 23457899999964321 2222222111111 0 00011245667788886654443 310
Q ss_pred -----CCCCcHHHHHHHHHHhhhccCCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhc-CCcEEEecCccccc
Q 017051 256 -----DYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYE 329 (378)
Q Consensus 256 -----~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~ 329 (378)
.+....+..++..+.|++ ++.+.+|++.|.+... =..+.++. ++|++++||.|...
T Consensus 155 ~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~---------------d~~la~~~~giD~ii~gh~h~~~ 216 (302)
T d2z1aa2 155 PGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE---------------DLKLARRLVGVQVIVGGHSHTLL 216 (302)
T ss_dssp CCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH---------------HHHHHTTCSSCCEEEECSSCCCB
T ss_pred ccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch---------------hhHHHhcCCCeeeeecCccceee
Confidence 011223334444444443 3556799999986311 11223333 69999999999754
Q ss_pred e
Q 017051 330 R 330 (378)
Q Consensus 330 r 330 (378)
.
T Consensus 217 ~ 217 (302)
T d2z1aa2 217 G 217 (302)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.89 E-value=7.6e-05 Score=53.10 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=50.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.+|..+.+...++++++|+|...... ..-.|+|....+......... ...+....++|+||+||+.|.++|
T Consensus 2 daP~~l~v~~~~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~~V 73 (92)
T d1tdqa2 2 DAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGVGI 73 (92)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEE--------ecCCCeeEEEECCccCCCEEEEEE
Confidence 37889999888899999999876433 344677876553322111111 233456678999999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 74 ~a 75 (92)
T d1tdqa2 74 SA 75 (92)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.83 E-value=4.3e-05 Score=54.93 Aligned_cols=80 Identities=19% Similarity=0.298 Sum_probs=48.9
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----Cc-EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PS-VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~-~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.|..+.+...+.+++.|.|.-..... .. .++|.............. . .....+|+||+|++.|.
T Consensus 3 ~P~~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~---------~--~~~~~~v~~L~p~t~Y~ 71 (96)
T d1x5xa1 3 MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------G--EDLAYTVKNLRRSTKYK 71 (96)
T ss_dssp CCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------E--SCSEEEEESCCSSCEEE
T ss_pred cCCCCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeec---------C--CCCEEEECCCCCCCEEE
Confidence 56666777778999999998643221 12 344443332222111111 1 11245688999999999
Q ss_pred EEeCc--------cCceeEEECCC
Q 017051 117 YRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (378)
|||.. .|+...|+|.|
T Consensus 72 ~rV~A~n~~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 72 FKVIAYNSEGKSNPSEVVEFTTCP 95 (96)
T ss_dssp EEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEcCCcEeCCCCCEEEEeCc
Confidence 99864 25677888877
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.77 E-value=0.00013 Score=53.73 Aligned_cols=89 Identities=22% Similarity=0.305 Sum_probs=54.0
Q ss_pred CCCCCCCceEEEEec--CCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 37 PKPSSHPQQVHISLA--GDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 37 ~~~~~~p~~v~l~~~--~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
..+...|..+.+... +.+++.|+|.-...... -.|.|............-. ...+..+..+|+||+
T Consensus 9 ~~P~~pP~~~~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~ 80 (111)
T d1x5ka1 9 LVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE--------PVVGNRLTHQIQELT 80 (111)
T ss_dssp CCCCSCCEEEEEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEE--------EESTTCSEEEECSCC
T ss_pred CCCCCCCCCcEEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEE--------EeCCCeeEEEECCCC
Confidence 345567888887654 37899999986543221 2556655443211110000 112233456789999
Q ss_pred CCCEEEEEeCc--------cCceeEEECCCC
Q 017051 111 HDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
|++.|.+||.. .|+...|+|+.+
T Consensus 81 p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~A 111 (111)
T d1x5ka1 81 LDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 111 (111)
T ss_dssp SSSEEEEEEEEECSSCBCCCCCCEEEECCCC
T ss_pred CCCEEEEEEEEEcCCCCcCCCCCEEEECCCC
Confidence 99999999864 256778888653
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.76 E-value=3.8e-05 Score=55.11 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=49.1
Q ss_pred CceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 43 PQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 43 p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
|..+.|...+.+++.|.|....... .-.|+|............+. ....+|++|+|++.|.+|
T Consensus 4 P~~~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~ 70 (93)
T d1x4xa1 4 CKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCR 70 (93)
T ss_dssp CCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEE
T ss_pred CCCCEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEE
Confidence 3333455566899999998643322 23566766554333222211 123468899999999999
Q ss_pred eCc--------cCceeEEECCCC
Q 017051 119 CGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 119 v~~--------~s~~~~F~t~p~ 133 (378)
|.. .|+...|+|+|+
T Consensus 71 V~A~n~~G~s~~S~~~~~~Tpps 93 (93)
T d1x4xa1 71 VQALSVVGAGPFSEVVACVTPPS 93 (93)
T ss_dssp EEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEECCcCcCCCCcEEEEeCCC
Confidence 864 266778888873
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.76 E-value=7.7e-05 Score=54.39 Aligned_cols=82 Identities=13% Similarity=0.172 Sum_probs=53.3
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
+|..+++...+++++.|+|....... .-.|+|............ . ........+.|+||+|+|.|
T Consensus 5 pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y 75 (104)
T d2b5ib2 5 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPL-L--------TLKQKQEWICLETLTPDTQY 75 (104)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCC-E--------EECSCCCEEEECSCCTTCEE
T ss_pred CCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeE-E--------ecCCCcEEEEECCCCCCCEE
Confidence 89999999999999999998764321 124666555432111000 0 11223344678999999999
Q ss_pred EEEeCc------------cCceeEEECCC
Q 017051 116 FYRCGR------------QGPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~------------~s~~~~F~t~p 132 (378)
.+||.. +|+...|+|.|
T Consensus 76 ~~rVra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 76 EFQVRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEEEEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEEEEECCCCCCCCCCCcCCEEEECCC
Confidence 999863 14557788876
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=0.00012 Score=52.14 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=53.1
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.+|..+.+...+++++.|+|.-.... ..-.|+|............ ..+....++|++|+|+|.|.+||
T Consensus 3 ~aP~n~~~~~~s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 71 (92)
T d1qg3a1 3 GAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHL-----------LDSKVPSVELTNLYPYCDYEMKV 71 (92)
T ss_dssp CCCEEEEEEECSTTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEE-----------EEESSSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEccCCEEEEEEEecCCCccceEEeeeeccccccEEEE-----------ecCCccEEEECCCCCCcEEEEEE
Confidence 47889988888899999999876432 2346777766543221111 01123356789999999999998
Q ss_pred Cc--------cCceeEEECC
Q 017051 120 GR--------QGPEFEFKTP 131 (378)
Q Consensus 120 ~~--------~s~~~~F~t~ 131 (378)
.. .|+...++|+
T Consensus 72 ~A~n~~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 72 CAYGAQGEGPYSSLVSCRTH 91 (92)
T ss_dssp EEECSSCBCCCCCCEEEECC
T ss_pred EEEeCCcCcCCCCCEEEEcC
Confidence 64 2455666664
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=0.00027 Score=51.97 Aligned_cols=82 Identities=23% Similarity=0.273 Sum_probs=53.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.++++|.|.-..... .-.|.|............ ........++|++|+|++.|
T Consensus 12 ~~P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~L~p~t~Y 81 (107)
T d1x5fa1 12 SAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATVY 81 (107)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCEE
T ss_pred cCCCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEE----------EeCCCccEEEecCCCCCCEE
Confidence 479999888888999999998542111 236666654433222111 12223456789999999999
Q ss_pred EEEeCcc--------CceeEEECCC
Q 017051 116 FYRCGRQ--------GPEFEFKTPP 132 (378)
Q Consensus 116 ~Y~v~~~--------s~~~~F~t~p 132 (378)
.+||... |....++|.|
T Consensus 82 ~~rV~A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 82 IFRVMAQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCcCCCCCEEEECCC
Confidence 9998642 4556677765
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.61 E-value=5e-05 Score=54.74 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=50.0
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCC-CCCcEEEE----eccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEY----GTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~-~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
+...|..+++.-.+.++++|+|..... .....++| ..... ..... .. ..+++|+||+|+|
T Consensus 2 ~p~~p~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~--~~~~~-----------~~--~t~~~i~~L~p~t 66 (94)
T d1x5aa1 2 ESLSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--EWHQM-----------VL--EPRVLLTKLQPDT 66 (94)
T ss_dssp CCCCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--EEEEE-----------ES--SSEEEEESCCSSC
T ss_pred cCCCCCceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCc--eEEEe-----------ec--cCEEEECCCCCCC
Confidence 344777788887889999999976432 12222333 33221 00000 01 1246789999999
Q ss_pred EEEEEeCc--------cCceeEEECCC
Q 017051 114 VYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
.|.+||.. .|+...|+|.|
T Consensus 67 ~Y~~rV~A~n~~G~g~~S~~~~~~T~P 93 (94)
T d1x5aa1 67 TYIVRVRTLTPLGPGPFSPDHEFRTSP 93 (94)
T ss_dssp EEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCcCcCCCCCEEEEeCC
Confidence 99999864 26778899876
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=0.00016 Score=51.10 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=48.4
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.++-.+.+++.|+|.-.... ..-.|+|+........... ..+.....++|++|+|++.|.++|
T Consensus 2 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~----------~v~~~~~~~~i~~L~p~t~Y~~~V 71 (89)
T d1fnfa3 2 DSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVVSI 71 (89)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----------EEETTCCEEEEESCCTTCEEEEEE
T ss_pred ccCcCCEEEEecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE----------EECCCccEEEECCCcccCEEEEEE
Confidence 37889988888899999999876433 2346788766543221110 112234456889999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 72 ~a 73 (89)
T d1fnfa3 72 VA 73 (89)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=0.00027 Score=49.96 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=48.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.+|..+++...+.++++|.|.-.... ..-.|+|....+...... . ..++....++|.||+||+.|.++|
T Consensus 3 d~P~~l~v~~~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~------~----~~~~~~~~~~i~~L~p~t~Y~~~V 72 (90)
T d1tena_ 3 DAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTT------I----DLTEDENQYSIGNLKPDTEYEVSL 72 (90)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE------E----EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEE------E----EecCCcceeeEeeecCCCEEEEEE
Confidence 37899999988899999999865433 334777876553322111 0 012233457899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 73 ~a 74 (90)
T d1tena_ 73 IS 74 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=3.2e-05 Score=55.61 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=50.6
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCCCcE----EEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESSPSV----VEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+++...+.++++|.|.-........ |+|.............. .....++|++|+|++.|.+
T Consensus 3 ~~~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 71 (95)
T d2djsa1 3 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVV 71 (95)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEE
T ss_pred CCCccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeec-----------CCccEEEEeecCCccEEEE
Confidence 45567778788999999998654333333 44544432221111100 1123567899999999999
Q ss_pred EeCc--------cCceeEEECCC
Q 017051 118 RCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 118 ~v~~--------~s~~~~F~t~p 132 (378)
||.. .|+...|+|.|
T Consensus 72 ~V~A~n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 72 QVRARTVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp EEEEEESSCEEEECCCEEEECCC
T ss_pred EEEEEcCCCCCCCCCCEEEEeCC
Confidence 9864 26677888877
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.59 E-value=0.00011 Score=53.29 Aligned_cols=80 Identities=13% Similarity=0.206 Sum_probs=52.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++...+.+++.|.|....... .-.|+|............ ..+.....+|+||+|++.|.
T Consensus 5 ~~p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 73 (98)
T d1x5la1 5 SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----------LKAVTTRATVSGLKPGTRYV 73 (98)
T ss_dssp CCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----------EEESSSEEEECSCCTTCEEE
T ss_pred CCCCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEE-----------ecCCceEEEECCCCCCCEEE
Confidence 367788777777999999998654322 235777765433222111 01112456789999999999
Q ss_pred EEeCc--------cCceeEEECC
Q 017051 117 YRCGR--------QGPEFEFKTP 131 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~ 131 (378)
+||.. +|+...|+|.
T Consensus 74 ~~V~a~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 74 FQVRARTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp ECEEEEETTEECCCCCCEEEECC
T ss_pred EEEEEEcCCCCcCCCCCEEEEcC
Confidence 99864 3667778874
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.59 E-value=0.00011 Score=52.74 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=46.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+++++.|.|....... .-.|+|+............ .........+|+||+|+|.|
T Consensus 8 ~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t~Y 78 (95)
T d2ibga1 8 PVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT---------IEGAHARSFKIAPLETATMY 78 (95)
T ss_dssp CCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE---------EECTTCCEEEECSCCTTCEE
T ss_pred CCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeee---------ccCCceeEEEEeeccCCeEE
Confidence 467777777677999999998543221 1267887655432211100 12233456789999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.+||..
T Consensus 79 ~~~V~A 84 (95)
T d2ibga1 79 EFKLQS 84 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=0.00016 Score=52.63 Aligned_cols=80 Identities=13% Similarity=0.282 Sum_probs=50.4
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
..|..+.+...+++++.|+|...... ..-.|+|............ .... ...+|+||+|++.|.+|
T Consensus 12 ~~P~~~~~~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~----------~~~~--~~~~i~~L~p~t~Y~~~ 79 (102)
T d1x5za1 12 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEPG--TSYRLQGLKPNSLYYFR 79 (102)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECSS--SEEEEECCCTTCEEEEC
T ss_pred cCCCCeEEEEccCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEE----------cCCc--CEEEECCCCCCCEEEEE
Confidence 47899988877899999999865321 1235666654432111110 0111 23568999999999999
Q ss_pred eCc--------cCceeEEECCC
Q 017051 119 CGR--------QGPEFEFKTPP 132 (378)
Q Consensus 119 v~~--------~s~~~~F~t~p 132 (378)
|.. .|+...++|+.
T Consensus 80 V~A~n~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 80 LAARSPQGLGASTAEISARTMQ 101 (102)
T ss_dssp EEEECSSCEEEECCCEEEECCC
T ss_pred EEEEcCCCEeCCCCCEEEEcCC
Confidence 864 24566677754
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.54 E-value=0.00028 Score=51.07 Aligned_cols=83 Identities=12% Similarity=0.144 Sum_probs=52.6
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
..|..+++...+.++++|.|....... .-.|.|...++.......-. ...+.....+|.+|+|++.
T Consensus 3 ~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~ 74 (101)
T d1x4ya1 3 AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--------MVEGDRYWHSISHLQPETS 74 (101)
T ss_dssp SCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--------EEETTCCEEEECSCCTTCE
T ss_pred CCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEE--------EEcCCeeEEEEcCCCCCCE
Confidence 589999999888999999998642211 12477766543222111100 0112233456899999999
Q ss_pred EEEEeCc--------cCceeEEECC
Q 017051 115 YFYRCGR--------QGPEFEFKTP 131 (378)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~t~ 131 (378)
|.++|.. .|+...++|.
T Consensus 75 Y~~~v~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 75 YDIKMQCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EEEEEEEECTTCCCCCCCCEEEECC
T ss_pred EEEEEEEEcCCCCCCCCCcEEEEcc
Confidence 9999864 2566777774
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.54 E-value=0.0003 Score=51.52 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=50.7
Q ss_pred CCCCCCCceEEEEecCCCeEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 37 PKPSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 37 ~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
.+++..|..+.+...+++++.|.|....... .-.|+|............-. . . .......+++|++|+
T Consensus 6 ~~P~~pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~--~--~~~~~~~~~~i~~L~ 79 (109)
T d1va9a1 6 AAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV--E--M--KATGDSEVYTLDNLK 79 (109)
T ss_dssp CCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC--B--C--CCCSSEEEEEEESCC
T ss_pred CCCCCCCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee--E--E--ecCCCeeEEEECCCC
Confidence 3556689999998888999999999743211 12566765543211110000 0 0 123346677899999
Q ss_pred CCCEEEEEeCc
Q 017051 111 HDTVYFYRCGR 121 (378)
Q Consensus 111 p~t~Y~Y~v~~ 121 (378)
|+|.|.++|..
T Consensus 80 p~t~Y~~~V~a 90 (109)
T d1va9a1 80 KFAQYGVVVQA 90 (109)
T ss_dssp SSCCEEEEEEE
T ss_pred cceEEEEEEEE
Confidence 99999999864
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.52 E-value=0.00045 Score=49.16 Aligned_cols=79 Identities=15% Similarity=0.232 Sum_probs=51.6
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+.-.+.+++.|.|....... .-.|+|+...+...... .......+++++||+|++.|.+
T Consensus 3 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~ 71 (93)
T d2vkwa2 3 APKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEI-----------RLPSGSDHVMLKSLDWNAEYEV 71 (93)
T ss_dssp CCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCE-----------EECTTCCEEEECSCCTTCEEEE
T ss_pred CCccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeee-----------eccCCceEEEEeccccceEEEE
Confidence 68888777677999999999875432 23677776654322111 1112234577899999999999
Q ss_pred EeCcc-----C--ceeEEECC
Q 017051 118 RCGRQ-----G--PEFEFKTP 131 (378)
Q Consensus 118 ~v~~~-----s--~~~~F~t~ 131 (378)
||... | ....|+|.
T Consensus 72 ~V~A~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 72 YVVAENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EEEEEETTEECCCEEEEEECC
T ss_pred EEEEEcCCCCcCCEeEEEEec
Confidence 99742 2 24567774
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.48 E-value=0.00049 Score=48.98 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=48.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.+|..+.+...+.++++|+|.-.... ..-.|.|....+...... . ..+.....++++||+||++|.++|
T Consensus 5 ~~P~~l~v~~v~~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~------~----~~~~~~~~~~i~~L~p~t~Y~v~V 74 (93)
T d1tdqa1 5 DGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT------F----RLQPPLSQYSVQALRPGSRYEVSI 74 (93)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE------E----EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccCCCceEEEEEeccCcceeeE------E----EeCCCceEEEEeCcccceEEEEEE
Confidence 58999999988899999999865433 233677776553222110 0 112223456899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 75 ~a 76 (93)
T d1tdqa1 75 SA 76 (93)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.48 E-value=0.00026 Score=49.74 Aligned_cols=69 Identities=10% Similarity=0.193 Sum_probs=47.7
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC-CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS-PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.++..+.+++.|.|......- .-.|+|....+...... ..+...+++|+||+|||.|.++|
T Consensus 2 ~~P~nl~v~~~~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~~~~L~p~t~Y~v~V 69 (86)
T d1tdqa3 2 DSPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVT------------VPRDRTSYTLTDLEPGAEYIISI 69 (86)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSCCEEEE------------EESSCSEEEECCCCTTCCEEEEE
T ss_pred ccCCCCEEEEecCCEEEEEEeCCCCCccceEEEEecccccceEEE------------eCCCccEEEECCCccccEEEEEE
Confidence 368889999888999999998764332 34778876543221111 11122357899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 70 ~a 71 (86)
T d1tdqa3 70 TA 71 (86)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.00011 Score=55.54 Aligned_cols=92 Identities=17% Similarity=0.214 Sum_probs=55.8
Q ss_pred CCCCCCCCceEEEEecCCCeEEEEEEcCCCC---C---CcEEEEeccCCCCC---eeEEeeeeEEeeeeeccCeEEEEEE
Q 017051 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDES---S---PSVVEYGTSPGGYN---CGAEGESTSYRYLFYRSGKIHHTVI 106 (378)
Q Consensus 36 ~~~~~~~p~~v~l~~~~~~~~~i~W~t~~~~---~---~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~~l 106 (378)
|-++...|..|.+...+.++++|.|...... . ...+.|........ ........ ...+....++|
T Consensus 11 e~~P~~~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i 84 (125)
T d1uena_ 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKIL------TFQGSKTHGML 84 (125)
T ss_dssp CCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEE------EEESSCSEEEE
T ss_pred CcCCCCCCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEE------EeCCCccEEEE
Confidence 3355568999988878899999999754211 1 12344443322111 11111100 11223446889
Q ss_pred CCCCCCCEEEEEeCc--------cCceeEEECCCC
Q 017051 107 GPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 107 ~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
.+|+|+|.|.+||.. .|....|+|++.
T Consensus 85 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 85 PGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp ESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 999999999999864 266788999763
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.00025 Score=51.50 Aligned_cols=79 Identities=11% Similarity=0.067 Sum_probs=51.7
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
.|.++++...+.+++.|.|...... ..-.|+|....+...... ..+.....+|+||+|||.|.++|.
T Consensus 3 ~P~~l~~~~~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~l~~L~p~t~Y~~~V~ 70 (102)
T d2cuha1 3 GPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPLQAE------------TPGSAVDYPLHDLVLHTNYTATVR 70 (102)
T ss_dssp SCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCEEEE------------EETTCSEEEECSCCSSSEEEEEEE
T ss_pred CCCccEEEEeCCCEEEEEEEeeeccceeeEEEEEeccccceeee------------eeeeeeeEEEccEEeeEEEEEEEE
Confidence 6888888877899999999875433 334677765543211110 112233567999999999999986
Q ss_pred cc-----C--ceeEEECCC
Q 017051 121 RQ-----G--PEFEFKTPP 132 (378)
Q Consensus 121 ~~-----s--~~~~F~t~p 132 (378)
.- | ....|+|.+
T Consensus 71 a~~~~~~s~~~~~~~~T~~ 89 (102)
T d2cuha1 71 GLRGPNLTSPASITFTTGL 89 (102)
T ss_dssp EEETTEECCCEEEEEESCC
T ss_pred EEeCCCCcCCEEEEEECCC
Confidence 41 2 235677765
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00015 Score=51.97 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=46.7
Q ss_pred CCceEEEEecC--CCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAG--DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~--~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|.++.++..+ ++++.|+|...... ..-.|+|....+...... . ..++-...++|+||+||+.|..
T Consensus 2 aP~~~~vt~~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~------~----~v~~~~~~~~l~gL~P~t~Y~v 71 (93)
T d1owwa_ 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE------A----TIPGHLNSYTIKGLKPGVVYEG 71 (93)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEE------E----EECSSCCEEEECSCCSSEEEEE
T ss_pred cCcccEEEEccCCCCEEEEEeecccccceeEEEEEEeeccccceeee------e----ccCCCccEEEECCcccCcEEEE
Confidence 68888887665 58999999976321 234677876543321110 0 1233455678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 72 ~v~a 75 (93)
T d1owwa_ 72 QLIS 75 (93)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.44 E-value=0.00029 Score=49.67 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=48.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+++++.|+|...... ..-.|+|............ .......++|+||+||+.|.++|
T Consensus 2 ~~P~~l~v~~v~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~V 70 (88)
T d1qr4a2 2 GSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVNI 70 (88)
T ss_dssp CCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEEE
T ss_pred cCCcceEEEEecCCEEEEEEEcccEeeceEEEEEEeccCCceEEEE-----------ecCCccEEEECCCCCCCEEEEEE
Confidence 47888988888899999999865433 3347778765543221111 11223457899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 71 ~a 72 (88)
T d1qr4a2 71 IS 72 (88)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.43 E-value=0.0002 Score=50.35 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=47.3
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
+|..+++...+.+++.|+|.-.... ..-.|+|.......... ..+......+|+||+||+.|.++|.
T Consensus 2 aP~~l~v~~~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~~~------------~~~~~~~~~~~~~L~p~t~Y~v~V~ 69 (87)
T d1qr4a1 2 NPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKNEM------------EIPVDSTSFILRGLDAGTEYTISLV 69 (87)
T ss_dssp CCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCCEEEE------------EECTTCSEEEEESCCSSCEEEEEEE
T ss_pred cCcCcEEEEecCCEEEEEEECCCCCcceeEEEeecCCcceeEE------------eCCCCcCEEEECCCCcCCEEEEEEE
Confidence 6899999988899999999876433 33477787654321100 1122334578999999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 70 a 70 (87)
T d1qr4a1 70 A 70 (87)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00041 Score=50.24 Aligned_cols=83 Identities=17% Similarity=0.082 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.|... ..-..+++++|.|.-....+ .-.|+|+...+.......... ........++|+||+|++.|+
T Consensus 5 ~P~~~-~~~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~Y~ 76 (101)
T d2haza1 5 SPSID-QVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETTYA 76 (101)
T ss_dssp CCEEE-EEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEH-------HHHHHHSEEEECSCCTTCEEE
T ss_pred CCccC-EEEeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeee-------ecccceeEEEecCCCCCeEEE
Confidence 66433 33355789999999754322 235677765543221111000 011122346899999999999
Q ss_pred EEeCc--------cCceeEEECCC
Q 017051 117 YRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~p 132 (378)
+||.. .|+...|+|.|
T Consensus 77 frV~A~N~~G~g~~S~~~~~~T~P 100 (101)
T d2haza1 77 VRLAALNGKGLGEISAASEFKTQP 100 (101)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCcCcCCCCceeEEeCC
Confidence 99864 25677788876
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.42 E-value=0.00037 Score=50.32 Aligned_cols=73 Identities=10% Similarity=0.041 Sum_probs=40.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCC-------cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSP-------SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t 113 (378)
.+|..|.+...+++++.|+|........ -.|+|+...........-. ........+.+.+|+|++
T Consensus 3 ~~P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t 74 (101)
T d1iarb2 3 RAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNV--------TYLEPSLRIAASTLKSGI 74 (101)
T ss_dssp CCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEE--------CSSCCEEEECC-----CC
T ss_pred ccCCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeee--------ccCccceEEEECCCCCCC
Confidence 4788888877778999999997643221 3577766654333211101 123345567899999999
Q ss_pred EEEEEeCc
Q 017051 114 VYFYRCGR 121 (378)
Q Consensus 114 ~Y~Y~v~~ 121 (378)
.|.+||..
T Consensus 75 ~Y~~rVrA 82 (101)
T d1iarb2 75 SYRARVRA 82 (101)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999974
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=97.41 E-value=0.0016 Score=54.45 Aligned_cols=180 Identities=19% Similarity=0.258 Sum_probs=100.0
Q ss_pred eEEEEEcccCCCCChH----HHHHHhhcCCCcEEEeccccccccch--hhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 137 ITFAVAGDLGQTGWTK----STLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
+|++++||+ .+.... ..+..++ .+.||||..|..+-.+.. ....+++++ ..+-+ .+.|||=++..
T Consensus 1 MkiLfiGDI-vG~~Gr~~v~~~Lp~Lk-~~~DfVIaNgENaa~G~Git~k~~~~L~~------~GVDv-IT~GNH~wdkk 71 (252)
T d2z06a1 1 MRVLFIGDV-MAEPGLRAVGLHLPDIR-DRYDLVIANGENAARGKGLDRRSYRLLRE------AGVDL-VSLGNHAWDHK 71 (252)
T ss_dssp CEEEEECCB-CHHHHHHHHHHHHHHHG-GGCSEEEEECTTTTTTSSCCHHHHHHHHH------HTCCE-EECCTTTTSCT
T ss_pred CeEEEEecc-CCHHHHHHHHHHhHHHH-hhCCEEEEeeeccCCCcCCCHHHHHHHHH------hCCCE-EEcCcccccch
Confidence 589999998 322222 2333443 468999999999764322 222333222 22444 48999988532
Q ss_pred CcccchhhhchhcccCCCCC-CCCCCCceEEEEeCCEEEEEEcCc--CCCCCcHHHHHHHHHHhhhccCCCCCeEEEEec
Q 017051 211 PLIMDAFQSYNARWKMPFEE-SGSNSNLYYSFDVAGAHLIMLGSY--ADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLH 287 (378)
Q Consensus 211 ~~~~~~~~~~~~~~~~p~~~-~~~~~~~~ysf~~g~v~fi~ldt~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H 287 (378)
.- ..+.. .++.-.|.+- .+..+..|+.++.++.++.+++-. ........-+.-+++.+++. +.+.+||=+|
T Consensus 72 ei--~~~i~-~~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~~---~~~~i~VDfH 145 (252)
T d2z06a1 72 EV--YALLE-SEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEE---KADYVLVEVH 145 (252)
T ss_dssp TH--HHHHH-HSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHC---CCSEEEEEEE
T ss_pred hh--hhhhc-cccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhhc---CccEEEEEcc
Confidence 11 11111 1122234442 233456788899888777776642 11112223344444445543 4566888888
Q ss_pred cccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 288 VPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 288 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
.=..+ . +.-.-.+-+-+|.+|+-=|+|.-.-...+. |+|+-|++
T Consensus 146 aEaTS-----------E-K~A~g~~ldGrvsavvGTHTHV~TaD~rIL-----p~GTayiT 189 (252)
T d2z06a1 146 AEATS-----------E-KMALAHYLDGRASAVLGTHTHVPTLDATRL-----PKGTLYQT 189 (252)
T ss_dssp CSCHH-----------H-HHHHHHHHBTTBSEEEEESSCSCBSCCEEC-----TTSCEEES
T ss_pred cchhh-----------h-heeeeEecCCCEEEEEecCccccccccEEe-----cCCeEEEc
Confidence 63221 1 222344556689999999999854333332 57898875
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.40 E-value=0.00019 Score=51.99 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=48.8
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeE--EeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGA--EGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
....|..++++-.+.++++|.|...... ....|+|........... ....... ...+.....+|.||+|++.|
T Consensus 3 ~Pp~~~~l~v~~~t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~L~p~t~Y 78 (101)
T d2cuia1 3 SRPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL----MVPGTRHSAVLRDLRSGTLY 78 (101)
T ss_dssp CCCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE----EEETTCCEEEECSCCTTCEE
T ss_pred CccCCCCcEEEEECCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEe----ecccceeEEEeCCCCcCCEE
Confidence 3447788888888899999999655322 234777876543221111 1111111 12233455678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.++|..
T Consensus 79 ~~~V~a 84 (101)
T d2cuia1 79 SLTLYG 84 (101)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=97.40 E-value=0.0016 Score=54.79 Aligned_cols=178 Identities=17% Similarity=0.162 Sum_probs=102.2
Q ss_pred eEEEEEcccCCCCChH----HHHHHhhcCCCcEEEeccccccccch--hhhHHHHHHhhHhhhhCCceeecCCCCccCCC
Q 017051 137 ITFAVAGDLGQTGWTK----STLDHIGQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (378)
Q Consensus 137 ~~f~~~gD~~~~~~~~----~~~~~i~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~v~GNHD~~~~ 210 (378)
+||+++||+ .+.... +.+..++ .+.||||..|..+-.+.. ....+++++ ..+-+ .+.|||=+...
T Consensus 1 MkILfiGDI-vG~~Gr~~v~~~Lp~lk-~~~DfVIaNgENaa~G~Git~~~~~~l~~------~GvDv-iT~GNH~wdkk 71 (255)
T d1t70a_ 1 MRVLFIGDV-FGQPGRRVLQNHLPTIR-PQFDFVIVNMENSAGGFGMHRDAARGALE------AGAGC-LTLGNHAWHHK 71 (255)
T ss_dssp CEEEEECCB-BHHHHHHHHHHHHHHHG-GGCSEEEEECTBTTTTSSCCHHHHHHHHH------HTCSE-EECCTTTTSST
T ss_pred CeEEEEecC-CCHHHHHHHHHHhHHHH-hhCCEEEECCccCCCCcCCCHHHHHHHHH------cCCcE-EEcCchhhcch
Confidence 589999998 222222 3344444 458999999999864332 222333222 12444 48999988532
Q ss_pred Ccccchhhhch----hcccCCCCC--CCCCCCceEEEEeCCEEEEEEcC--cCCCCCcHHHHHHHHHHhhhccCCCCCeE
Q 017051 211 PLIMDAFQSYN----ARWKMPFEE--SGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWLKDDLSKVDRKKTPWL 282 (378)
Q Consensus 211 ~~~~~~~~~~~----~~~~~p~~~--~~~~~~~~ysf~~g~v~fi~ldt--~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 282 (378)
....|. .+.-.|.+- .+..+..|+.+...+.++.+++- .........-+.-+++.|++. +.+.+
T Consensus 72 -----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~~---~~~~i 143 (255)
T d1t70a_ 72 -----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTV 143 (255)
T ss_dssp -----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEE
T ss_pred -----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhhc---CCCeE
Confidence 222222 122334332 23456778888888766666664 222222233455566667653 44568
Q ss_pred EEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
||=+|.=..+ . +.-.-.+-+-+|.+|+-=|+|.-.-...+. |+|+-|++
T Consensus 144 ~VDfHaEaTS-----------E-K~A~g~~ldGrvsav~GTHTHV~TaD~rIl-----p~GTay~T 192 (255)
T d1t70a_ 144 FVDFHAEATS-----------E-KEAMGWHLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQT 192 (255)
T ss_dssp EEEEECSCHH-----------H-HHHHHHHHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEES
T ss_pred EEEccchhHH-----------H-HHHHHhhhcCcEEEEEecCcccccccceEe-----cCCcEEEe
Confidence 8888863221 1 222344556689999999999854433333 57888875
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=97.39 E-value=0.0008 Score=47.35 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=42.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
..|..+.+...+.++++|+|.-.. .......|....+. ..... ... -..+++||+||+.|.|+|.
T Consensus 5 ~~P~~l~~~~~~~~sv~lsW~~p~-~~~~i~~Y~i~~~~-~~~~~-----------~~~--t~~~~~~L~p~t~Y~~~V~ 69 (88)
T d1k85a_ 5 TAPTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGT-ALATT-----------VTG--TTATISGLAADTSYTFTVK 69 (88)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCS-CCSSEEEEEEEESS-SEEEE-----------ESS--SEEEECCCCSSCEEEEEEE
T ss_pred CCCCCcEEEEecCCEEEEEEeCCC-CCCCEEEEEEEccc-eEEEe-----------cCC--CEEEECCCCCCCEEEEEEE
Confidence 478899888778999999997543 23345566543211 11111 111 1356899999999999987
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 70 A 70 (88)
T d1k85a_ 70 A 70 (88)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.0002 Score=50.59 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=47.1
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
+|..+.+...+.+++.|+|.-.... ..-.|+|....+...... . ........++|+||+||+.|.++|.
T Consensus 3 aP~nl~v~~~~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~L~p~t~Y~~~V~ 72 (89)
T d1fnha3 3 APSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVV--------P--RPRPGVTEATITGLEPGTEYTIYVI 72 (89)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEECTTSCCEECT--------T--CCCTTCCEEEEESCCTTCEEEEEEE
T ss_pred cCcCCEEEEecCCEEEEEEeCCCcCCceEEEEEeeccCCccEEE--------E--EcCCCccEEEEEeeeCCCEEEEEEE
Confidence 6888988888899999999865433 334777876543211100 0 1122234578899999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 73 a 73 (89)
T d1fnha3 73 A 73 (89)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00057 Score=48.53 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=46.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.+...+.+++.|+|...... ..-.|+|....+... . . ..+.....++|+||+||+.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~-~-----~------~~~~~~~~~~i~~L~p~t~Y~~~V 70 (93)
T d2cuma1 3 EAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQ-E-----I------LLPGGITSHQLLGLFPSTSYNARL 70 (93)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSCEE-E-----E------EECSSCSEEEECSCCTTCEEEEEE
T ss_pred CcCCCCEEEEeCCCEEEEEEEccccccccEEEEEEccccccE-E-----E------EECCCccEEEEeCccCCCEEEEEE
Confidence 37888888877899999999876433 335777876543211 0 0 112223456799999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 71 ~a 72 (93)
T d2cuma1 71 QA 72 (93)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00052 Score=48.48 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=47.6
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+++...+.++++|.|.-...+ ..-.|+|....+...... ..........|++|+||+.|.++|
T Consensus 3 spP~~l~v~~~~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~V 71 (90)
T d1fnha2 3 SPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIYL 71 (90)
T ss_dssp CCCEEEEEEEECSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEE-----------ECCTTCSEEEEESCCTTCEEEEEE
T ss_pred CcCCCCEEEEecCCEEEEEEECCCCCCceeEEEEEEccCCceEEE-----------ecCCCccEEEeCCCCCCcEEEEEE
Confidence 47899999988899999999855333 334677776543222111 112223456789999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 72 ~a 73 (90)
T d1fnha2 72 YT 73 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.00056 Score=48.28 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=47.1
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.|..+++...+.+++.|.|...... ..-.|+|....+....... ...+....++|+||+|+|.|.++|
T Consensus 3 pP~~l~~~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (91)
T d1fnfa2 3 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL----------SISPSDNAVVLTNLLPGTEYVVSV 72 (91)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEE----------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred cCCceEEEEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEE----------EeCCCceEEEEeceeCCCEEEEEE
Confidence 5888888877899999999865322 2236788766543221110 112234457899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 73 ~a 74 (91)
T d1fnfa2 73 SS 74 (91)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.37 E-value=0.0004 Score=51.09 Aligned_cols=74 Identities=22% Similarity=0.211 Sum_probs=45.9
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
...|..+.+.-.+.+++.|+|.-....+ .-.|+|.............. ........++++||+|++.|
T Consensus 11 P~~P~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~v~~L~p~t~Y 82 (108)
T d1x4za1 11 PEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--------AIPPSRLSVEITGLEKGISY 82 (108)
T ss_dssp CCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--------EECTTCCEEEEESCCTTCEE
T ss_pred CccCCCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEE--------eecCCccEEEECCCCCCCEE
Confidence 4477778788778999999995332211 23567765543322211111 11223345678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 83 ~frV~A 88 (108)
T d1x4za1 83 KFRVRA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.33 E-value=0.00031 Score=50.72 Aligned_cols=72 Identities=17% Similarity=0.182 Sum_probs=47.1
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
...|..+.+...+.++++|.|.-.... ..-.|+|....+..+.... ........++++||+||+.
T Consensus 2 P~~P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~----------~~~~~~~~~~v~~L~~~~~ 71 (98)
T d1x5ya1 2 TSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN----------KEPVERCGFTVKDLPTGAR 71 (98)
T ss_dssp CCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS----------SSCBSSSEEEEECCCTTCC
T ss_pred CCCCcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEee----------eecCceeEEEECCCcCCeE
Confidence 357889988878899999999854322 2246777766543322111 0111223457889999999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.|||..
T Consensus 72 Y~frV~A 78 (98)
T d1x5ya1 72 ILFRVVG 78 (98)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999975
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00059 Score=48.05 Aligned_cols=70 Identities=10% Similarity=0.051 Sum_probs=46.7
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
.|..+.++..+.++++|.|.-.... ....++|............ ....-..+.+|+||+||+.|.++|.
T Consensus 2 pP~~l~~~~v~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V~ 71 (90)
T d1fnha1 2 APTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----------NLAPDSSSVVVSGLMVATKYEVSVY 71 (90)
T ss_dssp CCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE----------EECTTCCEEEECSCCTTCEEEEEEE
T ss_pred CCCCEEEEEecCCEEEEEEEccceeccceEEEEEeeeCCCceEEE----------EeCCCCeEEEEecccCceEEEEEEE
Confidence 5888888888899999999876433 2346677655432211110 0111223578999999999999986
Q ss_pred c
Q 017051 121 R 121 (378)
Q Consensus 121 ~ 121 (378)
.
T Consensus 72 a 72 (90)
T d1fnha1 72 A 72 (90)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.00054 Score=49.76 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=49.9
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+++++.|+|....... .-.|+|...+.......... ....+|+||+|+|.|.
T Consensus 12 ~~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~ 78 (103)
T d1x5ga1 12 GPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEYS 78 (103)
T ss_dssp CCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEEE
T ss_pred ccCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEEE
Confidence 377888888778999999998643321 23467766554322221111 1245689999999999
Q ss_pred EEeCcc--------CceeEEECC
Q 017051 117 YRCGRQ--------GPEFEFKTP 131 (378)
Q Consensus 117 Y~v~~~--------s~~~~F~t~ 131 (378)
++|... |+...++|+
T Consensus 79 ~~V~A~n~~G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 79 FRVVAYNKHGPGVSTPDVAVRTL 101 (103)
T ss_dssp EEEEEECSSCCCCBCCCCCEECC
T ss_pred EEEEEEcCCcCcCCCCCEEEEcC
Confidence 998641 445556664
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00042 Score=49.87 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=43.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
..|..+.+...+++++.|+|....... .-.|+|............ .......++|+||+|+
T Consensus 3 ~pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~ 71 (100)
T d1x5ja1 3 MPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLKPN 71 (100)
T ss_dssp CCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----------CCBCSSEEEEESCCTT
T ss_pred CCCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEe-----------cCCCccEEEECCCCCC
Confidence 468889888888999999998642111 124555554432221110 0111224678999999
Q ss_pred CEEEEEeCc
Q 017051 113 TVYFYRCGR 121 (378)
Q Consensus 113 t~Y~Y~v~~ 121 (378)
|.|.+||..
T Consensus 72 t~Y~~~V~a 80 (100)
T d1x5ja1 72 TLYEFSVMV 80 (100)
T ss_dssp CEECCEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.27 E-value=0.00074 Score=49.15 Aligned_cols=70 Identities=9% Similarity=0.008 Sum_probs=40.4
Q ss_pred CceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 43 PQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 43 p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
|..+.+.-.+.+++.|.|.-..... .-.|+|+...+........ ...+..+..+|++|+||+.|.+|
T Consensus 10 P~~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t~Y~fr 80 (105)
T d2d9qb2 10 DPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVG---------PLPLEALQYELCGLLPATAYTLQ 80 (105)
T ss_dssp CC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEE---------EECSCEEEEEECSCCSCCCEEEE
T ss_pred CCCCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeee---------cccCCcceeEEecccCCeEEEEE
Confidence 3444455566899999998653222 2467787654332222111 12334566789999999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 81 Vra 83 (105)
T d2d9qb2 81 IRC 83 (105)
T ss_dssp EEE
T ss_pred EEE
Confidence 863
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00051 Score=49.22 Aligned_cols=69 Identities=13% Similarity=0.195 Sum_probs=48.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
.+|..+.|...+.+++.|+|...... -.-.|+|........... .. ......+|.+|+|++.|.+|
T Consensus 4 ~~P~nl~v~~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~-~~-----------~~~~~~~~~~L~p~t~Y~fr 71 (95)
T d2b5ic1 4 WAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ-SV-----------DYRHKFSLPSVDGQKRYTFR 71 (95)
T ss_dssp CCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE-EE-----------CSSCEEEECSCCTTSCEEEE
T ss_pred cCCCCCEEEEEeCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEe-ee-----------cccceeEcCCCCCCCEEEEE
Confidence 38999999877899999999976432 234778877654322111 11 11236778999999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 72 VRa 74 (95)
T d2b5ic1 72 VRS 74 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=97.24 E-value=0.0001 Score=61.72 Aligned_cols=63 Identities=29% Similarity=0.313 Sum_probs=43.4
Q ss_pred EEEEEcccCCCC-ChHHHHHHhh-cCCCcEEEeccccccccchhhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 138 TFAVAGDLGQTG-WTKSTLDHIG-QCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 138 ~f~~~gD~~~~~-~~~~~~~~i~-~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
|+.++||+|..- ...++++.+. ....|.++++||+++.+.... + .++ +....-+.++.||||.
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~~~~d~lv~lGD~vDrGp~s~--~----vl~-~l~~~~~~~i~GNHE~ 78 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV--E----CLE-LITFPWFRAVRGNHEQ 78 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH--H----HHG-GGGSTTEEECCCHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCCCCCCEEEEeCCccccCccHH--H----HHH-HhhccccccccCcHHH
Confidence 789999998552 2345666665 356689999999998665421 1 222 2234567899999997
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.22 E-value=0.00048 Score=49.14 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=45.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
.|..+.+...+.+++.|.|...... ..-.|+|............ .........+|+||+||+.|.++|
T Consensus 8 ~P~~l~v~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~Y~~~V 77 (95)
T d2fnba_ 8 QLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED----------FVDSSVGYYTVTGLEPGIDYDISV 77 (95)
T ss_dssp CCTTCEEECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEEE----------ECCSSCSEEEECCCCTTSEEEEEE
T ss_pred cCCCeEEEEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEEE----------EeCCCCeEEEEecccCCEEEEEEE
Confidence 5778888877899999999765322 2235677665432111100 112234456799999999999999
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 78 ~a 79 (95)
T d2fnba_ 78 IT 79 (95)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.21 E-value=0.00087 Score=48.93 Aligned_cols=65 Identities=12% Similarity=0.078 Sum_probs=39.1
Q ss_pred EEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc
Q 017051 48 ISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (378)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~ 121 (378)
+...+.+++.|.|........ -.|+|+...+......... .....+..+|++|+|+|.|.+||..
T Consensus 16 ~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~---------~~~~~~~~~l~~L~p~t~Y~frVra 84 (106)
T d1cd9b2 16 VVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFH---------LPSSKDQFELCGLHQAPVYTLQMRC 84 (106)
T ss_dssp ----CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEE---------EESCEEEEEECCCCSCSCEEEEEEE
T ss_pred EecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeec---------ccCCceEEEEeccCCCeEEEEEEEE
Confidence 444568899999986543322 3788876543322221111 1223556679999999999999863
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.21 E-value=0.0014 Score=48.74 Aligned_cols=85 Identities=16% Similarity=0.318 Sum_probs=53.0
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCC--CCCcE----EEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDE--SSPSV----VEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~--~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
++..|..+.+...+++++.|.|..... ..... |+|+..... .. .. .. ...+....++|+||+|+
T Consensus 11 P~~~P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~-~~-~~--~~~~~~~~~~i~~L~p~ 80 (119)
T d1x5ha1 11 PSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SD-VT-ET--LVSGTQLSQLIEGLDRG 80 (119)
T ss_dssp CCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EE-EE-CC--BCCTTCCEEEEECCCSS
T ss_pred CCCCCcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cc-ee-ee--ecCCCccEEEeCCCCCC
Confidence 445799998887889999999986421 11122 334332210 00 00 00 12233456789999999
Q ss_pred CEEEEEeCc--------cCceeEEECCCC
Q 017051 113 TVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
+.|.++|.. .|....|+|++.
T Consensus 81 t~Y~~~V~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 81 TEYNFRVAALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp CEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CEEEEEEEEEcCCcCCCCCCCEEEEeCCC
Confidence 999999863 266778888653
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.0014 Score=48.26 Aligned_cols=83 Identities=19% Similarity=0.247 Sum_probs=52.2
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
..|..++++ ...+++.|+|....... .-.|+|............ . ........+.+.+|.
T Consensus 7 ~pP~nl~v~-~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~L~ 76 (114)
T d2gysa2 7 PEPRDLQIS-TDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI-L--------LSNTSQATLGPEHLM 76 (114)
T ss_dssp CCCEEEEEE-EETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE-E--------EESSSEEEECTTTCC
T ss_pred CcCCCeEEE-EeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEE-e--------eccCceEEEEeCCCC
Confidence 488899886 45678999998764221 124666665532221111 1 112234466789999
Q ss_pred CCCEEEEEeCc--------------cCceeEEECCCC
Q 017051 111 HDTVYFYRCGR--------------QGPEFEFKTPPA 133 (378)
Q Consensus 111 p~t~Y~Y~v~~--------------~s~~~~F~t~p~ 133 (378)
|++.|.+||.. +|+...|+|+|.
T Consensus 77 p~t~Y~~rVRa~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 77 PSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp TTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred CCcEEEEEEEEEeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 99999999853 256678888874
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=97.20 E-value=0.0022 Score=54.60 Aligned_cols=181 Identities=15% Similarity=0.181 Sum_probs=100.5
Q ss_pred CCeEEEEEcccCCCCChHHHH----HHh-hcCCCcEEEeccccccccch--hhhHHHHHHhhHhhhhCCceeecCCCCcc
Q 017051 135 FPITFAVAGDLGQTGWTKSTL----DHI-GQCKYDVHLLPGDLSYADYM--QHRWDTFGELVQPLASARPWMVTQGNHEK 207 (378)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~~----~~i-~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~~~~~l~~~~P~~~v~GNHD~ 207 (378)
..+|++++||+ .+.....++ ..+ ++.++||||..|-.+-.+.. ....+++++ ..+-+ .+.|||=+
T Consensus 3 ~~MkILfiGDI-vG~~GR~~v~~~Lp~Lr~~~~iDfVIaNgENaa~G~Git~k~~~eL~~------~GvDv-IT~GNH~w 74 (281)
T d1t71a_ 3 NSIKFIFLGDV-YGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSLKHYEFLKE------AGVNY-ITMGNHTW 74 (281)
T ss_dssp CCCEEEEECEE-BHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCHHHHHHHHH------HTCCE-EECCTTTT
T ss_pred ccceEEEEEcc-CCHHHHHHHHHHhHHHHHHhCCCEEEECCccCCCCcCCCHHHHHHHHH------hCCcE-EEcCchhh
Confidence 46899999998 232223333 333 36799999999999864332 222222221 22444 48999988
Q ss_pred CCCCcccchhhhch---hcccCCCCC-----CCCCCCceEEEEeCCEEEEEEcCcC--CCC--CcHHHHHHHHHHhhhcc
Q 017051 208 ESIPLIMDAFQSYN---ARWKMPFEE-----SGSNSNLYYSFDVAGAHLIMLGSYA--DYD--EYSDQYRWLKDDLSKVD 275 (378)
Q Consensus 208 ~~~~~~~~~~~~~~---~~~~~p~~~-----~~~~~~~~ysf~~g~v~fi~ldt~~--~~~--~~~~Q~~WL~~~L~~~~ 275 (378)
... ....|. .+.-.|.+- .+..+..|..++..+..+.+++-.. ... .....+.-+++.+.+
T Consensus 75 d~k-----ei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~-- 147 (281)
T d1t71a_ 75 FQK-----LDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK-- 147 (281)
T ss_dssp CCG-----GGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT--
T ss_pred hch-----hhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc--
Confidence 432 111221 122233332 1234567888888876666665421 111 112233444444443
Q ss_pred CCCCCeEEEEeccccccCCCCCCCCchHHHHHHHHHHHhcCCcEEEecCccccceeecccCCCcCCCccEEEE
Q 017051 276 RKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (378)
Q Consensus 276 ~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~g~~yiv 348 (378)
.+.+.+||=+|.=..+ . +.-.-.+-+-+|.+|+-=|+|.-.-...+. ++|+-|++
T Consensus 148 -~~~d~i~VDfHaEATS-----------E-K~A~g~~lDGrvsaVvGTHTHV~TaD~rIL-----p~GTAyiT 202 (281)
T d1t71a_ 148 -RDCDLHIVDFHAETTS-----------E-KNAFCMAFDGYVTTIFGTHTHVPSADLRIT-----PKGSAYIT 202 (281)
T ss_dssp -CCCSEEEEEEECSCHH-----------H-HHHHHHHHTTTSSEEEEESSSSCCTTCEEC-----TTSCEEES
T ss_pred -cCCCeEEEEeccchhh-----------h-hhhheeeeCCcEEEEEecCcccccCccccc-----cCCeEEEe
Confidence 2566788888863221 1 222344556789999999999854333332 57888875
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.19 E-value=0.0012 Score=46.99 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=46.4
Q ss_pred CCCceEEEEecC-CCeEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 41 SHPQQVHISLAG-DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 41 ~~p~~v~l~~~~-~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
..|..+++.... .++++|.|.-.... ..-.|+|....+....... . ..++....++|+||+|||.|..
T Consensus 3 ~PP~~l~v~~~~~ts~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y~v 73 (94)
T d1fnfa1 3 SPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLE-E--------VVHADQSSCTFDNLSPGLEYNV 73 (94)
T ss_dssp CCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEE-E--------EECTTCCEEECCCCCTTSCEEE
T ss_pred CcCcCcEEEEecCCCEEEEEeeCCCCCCeeEEEEEEEEecccCceEEE-E--------EeCCCccEEEECCCCCCCEEEE
Confidence 478999888665 45689999865332 2346778765433221110 0 1123345688999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
+|..
T Consensus 74 ~V~a 77 (94)
T d1fnfa1 74 SVYT 77 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.00029 Score=50.19 Aligned_cols=71 Identities=14% Similarity=0.236 Sum_probs=47.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..|..+.++-.+.++++|.|...... ..-.++|........ . . ...........+++||+|||.|.++|
T Consensus 3 d~P~~l~v~~vt~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-----~--~---~~~~~~~~~~~~i~~L~p~t~Y~~~V 72 (94)
T d1j8ka_ 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----E--L---FPAPDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----E--E---CCCCCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCCCCCEEEEecCCEEEEEEeCCCccccceEEEEEeecCCCc-----e--E---EEecCCCccEEEECCCCCCCEEEEEE
Confidence 47888888878899999999765332 334677766543111 0 0 00122344567899999999999998
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 73 ~a 74 (94)
T d1j8ka_ 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 64
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.13 E-value=0.00066 Score=49.82 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=40.1
Q ss_pred CCce--EEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 42 HPQQ--VHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 42 ~p~~--v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.|.. +.+.-.+.+++.|+|......+. -.|+|+...+... .... ........++|+||+||+.|
T Consensus 13 ~P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~---------~~~~~~~~~~i~~L~p~t~Y 82 (108)
T d1wf5a1 13 APEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLA---------SVDPKATSVTVKGLVPARSY 82 (108)
T ss_dssp CCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEES---------SCCTTCCEEEEESCCTTCEE
T ss_pred CCCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEee---------eecCCccEEEECCCCCCCEE
Confidence 4444 33333458899999986533222 3456665443211 1110 11222335678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 83 ~frV~A 88 (108)
T d1wf5a1 83 QFRLCA 88 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999965
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.12 E-value=0.00073 Score=48.56 Aligned_cols=70 Identities=14% Similarity=0.111 Sum_probs=43.2
Q ss_pred cCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc----
Q 017051 51 AGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR---- 121 (378)
Q Consensus 51 ~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~---- 121 (378)
.+.++++|+|.-.... ..-.|+|............. .. ...+++++|+|++.|.|||..
T Consensus 14 ~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~v~~L~p~t~Y~frV~A~N~~ 81 (97)
T d2crza1 14 PKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVYQ----------GS--EVECTVSSLLPGKTYSFRLRAANKM 81 (97)
T ss_dssp CCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEEE----------ES--CSEEEEESCCTTCEEEECCEEECSS
T ss_pred eeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEeec----------CC--ceEEEEcCCCCCEEEEEEEEEecCC
Confidence 3478999999854321 22466776654332222110 11 123568999999999999864
Q ss_pred ----cCceeEEECCC
Q 017051 122 ----QGPEFEFKTPP 132 (378)
Q Consensus 122 ----~s~~~~F~t~p 132 (378)
.|+...++|.|
T Consensus 82 G~s~~S~~~~~~T~p 96 (97)
T d2crza1 82 GFGPFSEKCDITTAP 96 (97)
T ss_dssp CBCCCCCCEEEECCC
T ss_pred eEcCCcCCCeEEeCc
Confidence 25667787766
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00043 Score=50.28 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=43.6
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
..|..+.+...+.++++|+|...... ..-.++|............ .........+++||+|+|.|
T Consensus 4 ~pP~~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y 73 (104)
T d1bpva_ 4 DPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKAN----------FSNILENEFTVSGLTEDAAY 73 (104)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECC----------CSCCCSSEEEECSCCSSCCE
T ss_pred CCCCCCEEEEecCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEE----------eeccceeEEEEcCCCCCCEE
Confidence 35666666666789999999864322 2246666665433221111 11122344678999999999
Q ss_pred EEEeCc
Q 017051 116 FYRCGR 121 (378)
Q Consensus 116 ~Y~v~~ 121 (378)
.|||..
T Consensus 74 ~frV~A 79 (104)
T d1bpva_ 74 EFRVIA 79 (104)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.0019 Score=47.21 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=46.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+.++++|.|.-..... .-.|+|............... . . ..........|.||+|++.|.
T Consensus 12 ~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~-~--~--~~~~~~~~~~v~~L~p~t~Y~ 86 (111)
T d1wisa1 12 GPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH-Q--L--SNEPDARSMEVPDLNPFTCYS 86 (111)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE-E--E--ESCTTCSEEEECSCCTTSEEC
T ss_pred cCCCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeee-e--e--ecccceeEEEeCCCCCCCEEE
Confidence 378899888778999999998553222 235666554332221111010 0 0 122233456789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
+||..
T Consensus 87 frV~A 91 (111)
T d1wisa1 87 FRMRQ 91 (111)
T ss_dssp CCCEE
T ss_pred EEEEE
Confidence 99864
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.03 E-value=0.002 Score=46.88 Aligned_cols=76 Identities=13% Similarity=0.146 Sum_probs=40.3
Q ss_pred EEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCC-eeEEeeee-EEeeeeeccCeEEEEEECCCCCCCEEEEEe
Q 017051 46 VHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYN-CGAEGEST-SYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (378)
Q Consensus 46 v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v 119 (378)
..++-.+.++++|+|.-....+. -.|+|........ ........ ...............+|+||+|++.|.+||
T Consensus 6 p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV 85 (107)
T d2ic2a1 6 PNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRI 85 (107)
T ss_dssp CEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEE
T ss_pred CEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEE
Confidence 34565679999999998654332 2466665443222 11111100 000001223346678999999999999999
Q ss_pred Cc
Q 017051 120 GR 121 (378)
Q Consensus 120 ~~ 121 (378)
..
T Consensus 86 ~A 87 (107)
T d2ic2a1 86 LA 87 (107)
T ss_dssp EE
T ss_pred EE
Confidence 74
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.00061 Score=49.29 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=46.3
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+...+++++.|.|.-..... .-.|+|.......... +...... ....-...++|.||+|++.|.+
T Consensus 5 ~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~~ 79 (103)
T d1qg3a2 5 EPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYRY 79 (103)
T ss_dssp CCCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBC--SCCEEEE---ECCTTCCEEEECCCCTTCCEEE
T ss_pred cCCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccc--cceEEEE---ecCCCceEEEEeecCCCCEEEE
Confidence 78888888888999999998654322 2356665554321111 0000000 1122234678999999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 80 ~V~A 83 (103)
T d1qg3a2 80 TVKA 83 (103)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.96 E-value=0.004 Score=44.93 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=43.2
Q ss_pred CCCceEEEEecC-CCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCE
Q 017051 41 SHPQQVHISLAG-DSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (378)
Q Consensus 41 ~~p~~v~l~~~~-~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~ 114 (378)
..|..+.+.... .+.+.+.|....... .-.|+|............ ........+.|.+|+|||.
T Consensus 6 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~ 75 (105)
T d1erna2 6 DAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRV----------EILEGRTECVLSNLRGRTR 75 (105)
T ss_dssp CCCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEE----------EECTTCCEEEECSCCSSCE
T ss_pred CCCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEE----------eecCCccEEEEeCCCCCcE
Confidence 478888888765 667999998753221 135666655432211110 0111223567899999999
Q ss_pred EEEEeCc
Q 017051 115 YFYRCGR 121 (378)
Q Consensus 115 Y~Y~v~~ 121 (378)
|.+||..
T Consensus 76 Y~~rVRa 82 (105)
T d1erna2 76 YTFAVRA 82 (105)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.95 E-value=0.00027 Score=53.04 Aligned_cols=86 Identities=15% Similarity=0.214 Sum_probs=48.2
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCC-CeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGY-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
+...|..+.+...++++++|.|...... ..-.++|....... ..... . . ..+.....+|++|+|+
T Consensus 15 pp~~P~~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~-~--~------~~~~~~~~~v~~L~p~ 85 (120)
T d1wfua_ 15 PLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG-V--I------YTGYATRHVVEGLEPR 85 (120)
T ss_dssp CCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEE-E--E------EEESCSEEEEESCCTT
T ss_pred CCCcCCCCEEeEecCCEEEEEEECCcccCcccccceeeeeeeeccccccccee-e--e------ccccccEEeCCCCCCC
Confidence 3445665545545689999999864321 12245665421111 10000 0 0 0011123568999999
Q ss_pred CEEEEEeCc--------cCceeEEECCCC
Q 017051 113 TVYFYRCGR--------QGPEFEFKTPPA 133 (378)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~t~p~ 133 (378)
+.|.|||.. .|+...++|.+.
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T d1wfua_ 86 TLYKFRLKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp CEEEEEEEEECSSSCEEECCCEEEECCCC
T ss_pred cEeeEEEEEEeCCcEeCCCCCEEEEeCCC
Confidence 999999864 256777888653
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.92 E-value=0.0012 Score=48.02 Aligned_cols=80 Identities=13% Similarity=0.165 Sum_probs=48.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCcE----EEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPSV----VEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~----v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+.++++|+|.-........ |+|............. .. ......+.+|+|++.|.
T Consensus 12 ~~P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~---------~~--~~~~~~~~~L~p~t~Y~ 80 (105)
T d1x3da1 12 DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY---------MG--SQKQFKITKLSPAMGCK 80 (105)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE---------EE--SCSEEEEESCCTTCEEE
T ss_pred cCCCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEe---------cC--CccEEEecCCcCCcEEE
Confidence 478888888778999999998764333333 3333332221111110 01 12245678999999999
Q ss_pred EEeCc--------cCceeEEECC
Q 017051 117 YRCGR--------QGPEFEFKTP 131 (378)
Q Consensus 117 Y~v~~--------~s~~~~F~t~ 131 (378)
+||.. .|+...|+|.
T Consensus 81 frV~A~N~~G~s~~S~~~~~~T~ 103 (105)
T d1x3da1 81 FRLSARNDYGTSGFSEEVLYYTS 103 (105)
T ss_dssp EECCEEESSCBCCCCCCEEEECS
T ss_pred EEEEEECCCeEcCCCCcEEEECC
Confidence 99974 2456667664
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.002 Score=47.09 Aligned_cols=81 Identities=15% Similarity=0.105 Sum_probs=49.8
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+. .+.++++|+|.-.... ..-.|+|+..... ...... ......+.+++.+|+|++.|.
T Consensus 9 sPP~~~~~~-~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~---------~~~~~~~~~~i~~L~p~t~Y~ 77 (108)
T d1v5ja_ 9 SPPRGLVAV-RTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDP---------AVAGTETELLVPGLIKDVLYE 77 (108)
T ss_dssp CCCEEEEEE-ECSSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEE---------EECSSCCEEECCCCCTTSCEE
T ss_pred CcCCCeEEE-EcCCEEEEEEEecccCCCceeEEEEEeeeeeee-eeeccc---------cccceeeeEEEEeccCCcEEE
Confidence 468888665 4678999999854322 1236777765432 111110 122234567789999999999
Q ss_pred EEeCcc--------CceeEEECCC
Q 017051 117 YRCGRQ--------GPEFEFKTPP 132 (378)
Q Consensus 117 Y~v~~~--------s~~~~F~t~p 132 (378)
|||..- |+...++|+.
T Consensus 78 ~rV~A~n~~g~s~~S~~~~~~T~~ 101 (108)
T d1v5ja_ 78 FRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp CCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEeCCCEeCCcCceEEECCC
Confidence 998741 4455566643
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0032 Score=44.18 Aligned_cols=66 Identities=14% Similarity=0.221 Sum_probs=42.0
Q ss_pred EEEEecCCCeEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc
Q 017051 46 VHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (378)
Q Consensus 46 v~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~ 121 (378)
++++-.++++++|.|...... ..-.|+|....+...... . ..++....++|+||+||+.|.++|..
T Consensus 3 l~v~~~t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~------~----~~~~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 3 LEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQE------F----TVPGSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp CEEEEECSSCEEEECCCCSSCCSEEEEEEEETTCCSCCEE------E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CEEEEeCCCEEEEEEEccceEecEEEEEEEcCCCCceeEE------E----EeCCCccEEEeCCCCCCCEEEEEEEE
Confidence 456667799999999765433 334777876543322110 0 01122336789999999999999864
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.82 E-value=0.002 Score=46.71 Aligned_cols=74 Identities=12% Similarity=0.109 Sum_probs=46.9
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCC--C---C-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDD--E---S-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~--~---~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
+...|..|.+...+.++++|+|.-.. . + ..-.|+|............ . .........+|.+|+|+
T Consensus 4 P~~~P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~ 74 (105)
T d1cfba2 4 PFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN-N--------IFDWRQNNIVIADQPTF 74 (105)
T ss_dssp CSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE-E--------ECCTTCCEEEECSCCSS
T ss_pred CCCCCcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE-E--------ecCCCccEEEECCCCCC
Confidence 44578888888777999999996421 1 1 1235777665432221110 0 12233456789999999
Q ss_pred CEEEEEeCc
Q 017051 113 TVYFYRCGR 121 (378)
Q Consensus 113 t~Y~Y~v~~ 121 (378)
+.|.++|..
T Consensus 75 t~Y~~~V~A 83 (105)
T d1cfba2 75 VKYLIKVVA 83 (105)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999864
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0049 Score=44.11 Aligned_cols=78 Identities=10% Similarity=0.078 Sum_probs=42.7
Q ss_pred CCceEEEEec----CCCeEEEEEEcCCCC----CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCC
Q 017051 42 HPQQVHISLA----GDSHMRVTWITDDES----SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (378)
Q Consensus 42 ~p~~v~l~~~----~~~~~~i~W~t~~~~----~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L 109 (378)
.|..+.+... +.+++.|+|...... ... .++|............ ......++|.||
T Consensus 5 pP~~l~~~~~~~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L 72 (104)
T d3d48r2 5 PPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------------AGQQTEFKILSL 72 (104)
T ss_dssp CCEEEEEECC------CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEE------------EETCSEEEECC-
T ss_pred CCCCCEEEEEeccCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeec------------cccccEEEECCC
Confidence 6777777533 367899999975321 112 3344443322221111 112334678999
Q ss_pred CCCCEEEEEeCc---------cCceeEEECC
Q 017051 110 EHDTVYFYRCGR---------QGPEFEFKTP 131 (378)
Q Consensus 110 ~p~t~Y~Y~v~~---------~s~~~~F~t~ 131 (378)
+|+|.|.+||.. +|+...++||
T Consensus 73 ~p~t~Y~~rVrA~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 73 HPGQKYLVQVRCKPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp -CCCEEEEEEEEEESSSCCCCCCCCEEEECC
T ss_pred CCCCEEEEEEEEEeCCCCCCCCcCCEEEECc
Confidence 999999999863 2455666665
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.76 E-value=0.0072 Score=43.30 Aligned_cols=68 Identities=7% Similarity=0.022 Sum_probs=41.3
Q ss_pred CCceEEEEec----CCCeEEEEEEcCCCC----C----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCC
Q 017051 42 HPQQVHISLA----GDSHMRVTWITDDES----S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (378)
Q Consensus 42 ~p~~v~l~~~----~~~~~~i~W~t~~~~----~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L 109 (378)
.|..+.+... ..+++.|+|...... . .-.|+|............. . .....+|.||
T Consensus 5 pP~nl~~~~~~~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~----------~--~~~~~~i~~L 72 (103)
T d1f6fb2 5 PPRNLTLEVKQLKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFT----------G--HQTQFKVFDL 72 (103)
T ss_dssp CCEEEEEEEC----CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEE----------E--TCSEEEECCC
T ss_pred CCCCCEEEEEecccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeecc----------c--ceeEEEeCCC
Confidence 6777766532 367899999876421 1 1245555554332222110 1 1235678999
Q ss_pred CCCCEEEEEeCc
Q 017051 110 EHDTVYFYRCGR 121 (378)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (378)
+||+.|.+||..
T Consensus 73 ~p~t~Y~~rVra 84 (103)
T d1f6fb2 73 YPGQKYLVQTRC 84 (103)
T ss_dssp CTTCEEEEEEEE
T ss_pred CcceEEEEEEEE
Confidence 999999999864
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.002 Score=47.48 Aligned_cols=71 Identities=17% Similarity=0.223 Sum_probs=43.4
Q ss_pred CCceEEEEecC--CCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 42 HPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 42 ~p~~v~l~~~~--~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
.|..+.+...+ .++++|.|.-..... .-.|+|+...+......... ...+....++|++|+|++.|
T Consensus 7 pP~~~~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~~~t~Y 78 (115)
T d1bqua2 7 PPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPFTEY 78 (115)
T ss_dssp CCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSSEEE
T ss_pred CCCCCEEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccc--------cccccccEEeeCCCccCcEE
Confidence 67777776544 788999998543221 24666766543322111000 12233456779999999999
Q ss_pred EEEeC
Q 017051 116 FYRCG 120 (378)
Q Consensus 116 ~Y~v~ 120 (378)
.+||.
T Consensus 79 ~~~V~ 83 (115)
T d1bqua2 79 VFRIR 83 (115)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99995
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.006 Score=44.22 Aligned_cols=71 Identities=14% Similarity=0.077 Sum_probs=43.8
Q ss_pred CCCCCceEEEEecC--CCeEEEEEEcCCCC---C----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCC
Q 017051 39 PSSHPQQVHISLAG--DSHMRVTWITDDES---S----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (378)
Q Consensus 39 ~~~~p~~v~l~~~~--~~~~~i~W~t~~~~---~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L 109 (378)
-...|..+.+.... .+++.|+|...... . .-.++|............ .......+|.+|
T Consensus 7 kP~PP~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~------------~~~~~~~~i~~L 74 (109)
T d1uc6a_ 7 KPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVE------------LSNGTAHTITDA 74 (109)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEE------------ESSCSEEEETTC
T ss_pred ECCCCCCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEec------------cCCceeEEeCCC
Confidence 34478888887543 68899999986421 1 124555544432221111 111234668999
Q ss_pred CCCCEEEEEeCc
Q 017051 110 EHDTVYFYRCGR 121 (378)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (378)
+|+|.|.+||..
T Consensus 75 ~~~t~Y~~rVrA 86 (109)
T d1uc6a_ 75 YAGKEYIIQVAA 86 (109)
T ss_dssp CSSSCEEEEEEC
T ss_pred CCCCEEEEEEEE
Confidence 999999999964
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=96.69 E-value=0.002 Score=46.17 Aligned_cols=70 Identities=13% Similarity=0.192 Sum_probs=42.9
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.++ .++++++|+|.-..... .-.|+|............... ... ...+.+.+|+|++.|.|
T Consensus 8 ~P~~~~v~-~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~L~p~t~Y~f 77 (100)
T d1cfba1 8 APKLTGIT-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK-------VPN--TDSSFVVQMSPWANYTF 77 (100)
T ss_dssp CCEEEEEE-ECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE-------EET--TCSEEEEECCSSEEEEE
T ss_pred cCcCcEEE-EcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeee-------cCC--ceEEEEecCCCCCEEEE
Confidence 88888887 45678999997554322 236777765443222211111 011 12245779999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 78 rV~A 81 (100)
T d1cfba1 78 RVIA 81 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.003 Score=46.71 Aligned_cols=72 Identities=11% Similarity=0.181 Sum_probs=45.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+...+++++.|.|.-..... .-.|+|.............. ........+|++|+|+|.|.
T Consensus 22 ~~P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 92 (117)
T d1wfoa1 22 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEV---------LAPSARQYTATGLKPESVYL 92 (117)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEE---------ECTTCCEEEEESCCSSSEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEe---------cCCceEEEEECCCCCCCEEE
Confidence 478888888778999999997543221 23567765543322111000 11122345689999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
+||..
T Consensus 93 ~~V~A 97 (117)
T d1wfoa1 93 FRITA 97 (117)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.0031 Score=46.66 Aligned_cols=70 Identities=9% Similarity=0.188 Sum_probs=42.8
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+...+.++++|+|.-..... .-.|+|.............. ... ....+|++|+|++.|.|
T Consensus 18 pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~--~~~~~v~~L~p~t~Y~f 87 (117)
T d1uema_ 18 PPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--------HVK--TTLYTVRGLRPNTIYLF 87 (117)
T ss_dssp CCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--------EEC--SSEEEECSCCTTCEEEE
T ss_pred CCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc--------ccc--cccceECCCCCCCEEEE
Confidence 78888888778999999996432211 23555655432211111000 011 13457899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 88 rV~A 91 (117)
T d1uema_ 88 MVRA 91 (117)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.43 E-value=0.0053 Score=45.93 Aligned_cols=71 Identities=14% Similarity=0.193 Sum_probs=44.1
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|..+.+...+.+++.|.|.-...... ..++|............-. .....+...|.+|+|++.|.+
T Consensus 19 ~P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~f 89 (127)
T d1ueya_ 19 PPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT---------EVSGTQTTAQLNLSPYVNYSF 89 (127)
T ss_dssp CCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE---------EEESSCCEEEECCCTTCEECC
T ss_pred CCCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEe---------ecCCceEEEECCCccCCEEEE
Confidence 789998888889999999986543322 2444544433222211111 011223355789999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 90 rV~A 93 (127)
T d1ueya_ 90 RVMA 93 (127)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.39 E-value=0.0051 Score=46.78 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=25.0
Q ss_pred EEEEECCCCCCCEEEEEeCc--------cCceeEEECCC
Q 017051 102 HHTVIGPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (378)
Q Consensus 102 h~~~l~~L~p~t~Y~Y~v~~--------~s~~~~F~t~p 132 (378)
..++|+||+|+|.|.+||.. .|+...|+|++
T Consensus 82 ~~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~ 120 (137)
T d1wk0a_ 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLS 120 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCC
T ss_pred cEEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCC
Confidence 35689999999999999864 25677899964
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.0061 Score=45.32 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=45.0
Q ss_pred CCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc-------
Q 017051 52 GDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR------- 121 (378)
Q Consensus 52 ~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~------- 121 (378)
+++++.|+|.-..... .-.|.|.......... ...... ........++|.||+|+|.|.+||..
T Consensus 28 s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~---~~~~~~---v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G 101 (120)
T d1ujta_ 28 TPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATS---SWQNLD---AKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQG 101 (120)
T ss_dssp BTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTT---CCEEEE---CCCTTCCEEEEESCCSSEEEEEEEEEESSSCCC
T ss_pred CCCeEEEEecCCCCCCcEEEEEEEeeecccCCCCc---ceEEEE---eccCceeEEEECCCCCCCEEEEEEEEEeCCcCc
Confidence 4899999998764322 2467776554221100 000000 12223445678999999999999864
Q ss_pred -cCceeEEECCCC
Q 017051 122 -QGPEFEFKTPPA 133 (378)
Q Consensus 122 -~s~~~~F~t~p~ 133 (378)
.|+...++|++.
T Consensus 102 ~~S~~~~~~T~e~ 114 (120)
T d1ujta_ 102 MDSESKTVRTTEE 114 (120)
T ss_dssp CCCCCEEEEECSS
T ss_pred CCCCCEEEEeCCC
Confidence 255667777663
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.31 E-value=0.0032 Score=45.60 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=44.5
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+.+.-.+.+++.|.|....... .-.|+|............ ...+.....+|+||+|++.|.
T Consensus 12 ~~p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 81 (106)
T d1wfna1 12 GPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH----------YLPNVTLEYRVTGLTALTTYT 81 (106)
T ss_dssp CCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE----------EECSSCCEEEEESCCTTCEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEE----------ecCCCeeEEEEccCCCCCEEE
Confidence 378888888777999999997653321 234666554322111000 112223456789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
++|..
T Consensus 82 ~~V~A 86 (106)
T d1wfna1 82 IEVAA 86 (106)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.30 E-value=0.0054 Score=44.34 Aligned_cols=72 Identities=18% Similarity=0.240 Sum_probs=41.0
Q ss_pred EecCCCeEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeCc--
Q 017051 49 SLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR-- 121 (378)
Q Consensus 49 ~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~~-- 121 (378)
...++++++|.|...... ..-.|+|............. ........++||+||+.|.+||..
T Consensus 21 ~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~rV~A~n 89 (107)
T d2crma1 21 GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-----------SGATREHLCDRLNPGCFYRLRVYCIS 89 (107)
T ss_dssp EEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-----------CSSCSEEEECSCCTTSCEEEEEEEEE
T ss_pred eeecCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEee-----------cCCccEEEEeccCCCCEEEEEEEEEC
Confidence 334588999999854322 12355555443322211111 111223578999999999999864
Q ss_pred ------cCceeEEECC
Q 017051 122 ------QGPEFEFKTP 131 (378)
Q Consensus 122 ------~s~~~~F~t~ 131 (378)
.|+...++|+
T Consensus 90 ~~G~s~~S~~v~v~Tp 105 (107)
T d2crma1 90 DGGQSAVSESLLVQTP 105 (107)
T ss_dssp TTEECCCCCCCCCCCC
T ss_pred CCcCcCCCCcEEEECC
Confidence 2445556654
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.015 Score=40.64 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=42.1
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y 117 (378)
.|. +.+...+.+++.|+|.-..... .-.|+|+........... ........+|++|+|++.|.+
T Consensus 3 ~P~-~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~ 70 (94)
T d2dn7a1 3 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----------FGKDDQHFTVTGLHKGTTYIF 70 (94)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----------EETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEE-----------cCCCccEEEEEccCCeeEEEE
Confidence 564 4356567899999999754322 235677665533222110 111223456899999999999
Q ss_pred EeCc
Q 017051 118 RCGR 121 (378)
Q Consensus 118 ~v~~ 121 (378)
||..
T Consensus 71 ~V~A 74 (94)
T d2dn7a1 71 RLAA 74 (94)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9974
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.26 E-value=0.018 Score=42.63 Aligned_cols=88 Identities=10% Similarity=0.043 Sum_probs=51.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCC----CCcEEEEeccCCCCCeeE---------EeeeeEEeeeeeccCeEEEEEEC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGA---------EGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
.+|..|.++. +.+++.|+|.-.... ..-.|+|+.......... .+...... ..+.....++.
T Consensus 9 ~aP~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 83 (123)
T d1wfta_ 9 GAPSTVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCT----VTAGQLANAHI 83 (123)
T ss_dssp CCCEEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEE----EEHHHHTTCCC
T ss_pred cCCcccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEe----ecCCccEEEEc
Confidence 3788888874 578999999954322 234677776554321110 00000000 01111223578
Q ss_pred CCCCCCEEEEEeCcc--------CceeEEECCCC
Q 017051 108 PLEHDTVYFYRCGRQ--------GPEFEFKTPPA 133 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~~--------s~~~~F~t~p~ 133 (378)
+|+|++.|.|||... |+...|+|...
T Consensus 84 ~L~p~t~Y~frV~A~N~~G~Gp~S~~~~~~t~~~ 117 (123)
T d1wfta_ 84 DYTSRPAIVFRISAKNEKGYGPATQIRWLQGNSK 117 (123)
T ss_dssp BCSSSCEEEEEEEEBSSSSBCCCEEEEEECCSCC
T ss_pred CCCCCCEEEEEEEEecCCcCCCCCCcEEEEecCC
Confidence 999999999999641 45667877553
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.24 E-value=0.013 Score=42.20 Aligned_cols=80 Identities=6% Similarity=0.009 Sum_probs=48.0
Q ss_pred CCCCceEE-EEecCCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEE
Q 017051 40 SSHPQQVH-ISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (378)
Q Consensus 40 ~~~p~~v~-l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y 115 (378)
...|..+. ++....++|+++|.-..... ...+.|................ ...........+++++|+|++.|
T Consensus 5 P~~P~~v~~i~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~t~Y 81 (107)
T d1cd9b1 5 PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPD---CVAKKRQNNCSIPRKNLLLYQYM 81 (107)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEE---EECCTTCCEEEEEGGGCCTTSCE
T ss_pred cCCCcCCEEEEecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeee---eccccCccccEEEcCCCCcCceE
Confidence 45888887 55556899999998653322 2355665543221111100000 00023345677889999999999
Q ss_pred EEEeCcc
Q 017051 116 FYRCGRQ 122 (378)
Q Consensus 116 ~Y~v~~~ 122 (378)
.+||...
T Consensus 82 ~frV~A~ 88 (107)
T d1cd9b1 82 AIWVQAE 88 (107)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999753
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.06 E-value=0.011 Score=42.26 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=44.3
Q ss_pred CCCceEEEEecC--CCeEEEEEEcCCC--CC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 41 SHPQQVHISLAG--DSHMRVTWITDDE--SS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 41 ~~p~~v~l~~~~--~~~~~i~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
..|..+.++..+ .+++.|+|..... .. .-.|+|............ ..+.....+|.+|+|+
T Consensus 3 ~pP~~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~ 71 (104)
T d1n26a3 3 DPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAWSG 71 (104)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCCTT
T ss_pred cCCCCCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeec-----------cccceEEEEECCCCCC
Confidence 378888887654 6789999996531 11 235666655433221111 1122345678999999
Q ss_pred CEEEEEeCc
Q 017051 113 TVYFYRCGR 121 (378)
Q Consensus 113 t~Y~Y~v~~ 121 (378)
+.|.+||..
T Consensus 72 t~Y~~rVra 80 (104)
T d1n26a3 72 LRHVVQLRA 80 (104)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.89 E-value=0.0098 Score=42.99 Aligned_cols=68 Identities=13% Similarity=0.138 Sum_probs=40.7
Q ss_pred CCceEEEEecC------CCeEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEEC
Q 017051 42 HPQQVHISLAG------DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (378)
Q Consensus 42 ~p~~v~l~~~~------~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~ 107 (378)
.|..+.++... ..++.|+|.-..... .-.|+|+...+....... ......++|+
T Consensus 3 PP~~l~~t~~~~s~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~------------~~~~~~~~i~ 70 (106)
T d1axib2 3 PPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------PILTTSVPVY 70 (106)
T ss_dssp CCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------CBSSSEEEEE
T ss_pred CCCCceeeEeeeccccccCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeee------------ecccceEEEC
Confidence 56666665432 347999998653211 235667665543222111 1112356789
Q ss_pred CCCCCCEEEEEeCc
Q 017051 108 PLEHDTVYFYRCGR 121 (378)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (378)
+|+||+.|.+||..
T Consensus 71 ~L~~~t~Y~frVRa 84 (106)
T d1axib2 71 SLKVDKEYEVRVRS 84 (106)
T ss_dssp EEETTSCEEEEEEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999953
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.0067 Score=43.25 Aligned_cols=69 Identities=14% Similarity=0.250 Sum_probs=37.8
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
.|..|+++. +.+++.|.|....... .-.|+|.............. ......++|.+|+||+.|.
T Consensus 7 ~Pp~l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~----------~~~~~~~~l~~L~p~t~Y~ 75 (100)
T d2gysa4 7 APPSLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTET----------LQNAHSMALPALEPSTRYW 75 (100)
T ss_dssp CCCEEEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEE----------EESCSEEECCCCCSSCCCE
T ss_pred CCCccEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceeecc----------cCCceEEEeCCCCCCCeEE
Confidence 344566653 4678999998775322 24677776543211111000 0112357789999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
+||..
T Consensus 76 ~rVRa 80 (100)
T d2gysa4 76 ARVRV 80 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.77 E-value=0.013 Score=42.78 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=43.0
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
..|..+++.. ..+++.|.|.-..... .-.|+|+..... .... .........+|.+|+|++.|.
T Consensus 22 ~~P~~~~~~~-~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~-~~~~-----------~~~~~~~~~~i~~L~p~t~Y~ 88 (113)
T d1x5ia1 22 EVPSSLHVRP-LVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH-AQTI-----------KVDYKQRYYTIENLDPSSHYV 88 (113)
T ss_dssp CSCSEEEEEE-ETTEEEEEEECCSCTTBCCCEEEEEECSSCGG-GEEE-----------ECCTTCCEEEECSCCSSCEEC
T ss_pred CCCEeeeeee-CCCEEEEEEEccccCCccEEEEEEEeeecccc-ceee-----------eeeCCccEEEEeccccCcEEE
Confidence 4788888764 4689999999553322 225666544321 1110 112234466799999999999
Q ss_pred EEeCc
Q 017051 117 YRCGR 121 (378)
Q Consensus 117 Y~v~~ 121 (378)
+||..
T Consensus 89 ~~V~A 93 (113)
T d1x5ia1 89 ITLKA 93 (113)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 99864
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.91 E-value=0.034 Score=38.94 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=45.1
Q ss_pred CCCCceEEEEecCCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEE
Q 017051 40 SSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (378)
Q Consensus 40 ~~~p~~v~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~ 116 (378)
...|..+.+...+.++++++|.-..... .-.|+|............ ..........+.+|+|++.|+
T Consensus 4 P~~P~n~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~L~~~~~Y~ 73 (95)
T d1bqua1 4 PEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA----------KRDTPTSCTVDYSTVYFVNIE 73 (95)
T ss_dssp CCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEEC----------CSSCTTEEECSSCCCTTSCEE
T ss_pred cCCCeeeEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEeec----------ccccceeeeeeeecCCCcEEE
Confidence 4588889988888999999998754332 235666554321111100 111111223567999999999
Q ss_pred EEeCcc
Q 017051 117 YRCGRQ 122 (378)
Q Consensus 117 Y~v~~~ 122 (378)
+||...
T Consensus 74 f~V~A~ 79 (95)
T d1bqua1 74 VWVEAE 79 (95)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999753
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.59 E-value=0.0013 Score=47.60 Aligned_cols=86 Identities=13% Similarity=0.043 Sum_probs=46.3
Q ss_pred CCCceEEEEecCCCeEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEEeC
Q 017051 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (378)
Q Consensus 41 ~~p~~v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~v~ 120 (378)
..|..|......++++.|+|..........+.|.-.=............. .......+.+.|.+|+|++ |.+||.
T Consensus 6 d~P~~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~t-Y~~rV~ 80 (102)
T d2dtge1 6 DIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDT----RKHFALERGCRLRGLSPGN-YSVRIR 80 (102)
T ss_dssp CCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCC----SSSCCCTTCCCCCSCCSSE-ECCCCC
T ss_pred CCCCCCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeee----eecccceEEEEEeccceee-EEEEEE
Confidence 35555655556688999999865444444555543210000000000000 0122344557789999975 999986
Q ss_pred c--------cCceeEEECC
Q 017051 121 R--------QGPEFEFKTP 131 (378)
Q Consensus 121 ~--------~s~~~~F~t~ 131 (378)
. .|+...|.|+
T Consensus 81 A~n~~G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 81 ATSLAGNGSWTEPTYFYVT 99 (102)
T ss_dssp EEETTBCCCCCCCCEECCC
T ss_pred EEcCCccCCCCCCEEEEcc
Confidence 4 2555666664
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.25 E-value=0.021 Score=42.33 Aligned_cols=80 Identities=11% Similarity=0.006 Sum_probs=43.0
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC-CcEEEE----eccCCCCCe-----eEEeee--------eEEeeeeeccCeEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS-PSVVEY----GTSPGGYNC-----GAEGES--------TSYRYLFYRSGKIHH 103 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~-~~~v~y----~~~~~~~~~-----~~~~~~--------~~~~~~~~~~~~~h~ 103 (378)
.|..+.+.-.+++++.|+|.-..... .....| ...+..... ...+.. ...............
T Consensus 4 ~plnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (125)
T d2dtge3 4 ELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPG 83 (125)
T ss_dssp CBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCE
T ss_pred CCEEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccCE
Confidence 56666677777999999997653222 233344 332221000 000000 000000012334556
Q ss_pred EEECCCCCCCEEEEEeCc
Q 017051 104 TVIGPLEHDTVYFYRCGR 121 (378)
Q Consensus 104 ~~l~~L~p~t~Y~Y~v~~ 121 (378)
.+|+||+|+|.|.++|..
T Consensus 84 ~~l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 84 WLMRGLKPWTQYAIFVKT 101 (125)
T ss_dssp EEECSCCSSCBCCBEEEE
T ss_pred EEECCCccCCEEEEEEEE
Confidence 789999999999999864
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.95 E-value=0.043 Score=47.12 Aligned_cols=66 Identities=20% Similarity=0.232 Sum_probs=39.6
Q ss_pred EEEEcccCCCCChHHHHHHhh---cCCCcEEEeccccccccchhhhHHHHHHh-hHhhhhCCceeecCCCCccC
Q 017051 139 FAVAGDLGQTGWTKSTLDHIG---QCKYDVHLLPGDLSYADYMQHRWDTFGEL-VQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 139 f~~~gD~~~~~~~~~~~~~i~---~~~~d~vi~~GDl~~~~~~~~~~~~~~~~-~~~l~~~~P~~~v~GNHD~~ 208 (378)
+.++||+|..- ..+++-++ ...-.-.|++||+++.+.. ..+.+.-. .-++.-.--++.++||||..
T Consensus 47 v~VvGDlHG~~--~DL~~if~~~g~p~~~~ylFLGDYVDRG~~--slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQF--HDLMELFRIGGKSPDTNYLFMGDYVDRGYY--SVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTCH--HHHHHHHHHHCCTTTSCEEECSCCCCSSSS--HHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCCH--HHHHHHHHhcCCCccceEEecCcccCCCCc--ceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 89999998542 33333332 2223458999999987654 23332221 12233335689999999984
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=93.54 E-value=0.056 Score=46.49 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=40.2
Q ss_pred EEEEcccCCCCC-hHHHHHHhhcCCCcEEEeccccccccchhhhHHHHHHh-hHhhhhCCceeecCCCCccC
Q 017051 139 FAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGEL-VQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 139 f~~~gD~~~~~~-~~~~~~~i~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~-~~~l~~~~P~~~v~GNHD~~ 208 (378)
+.++||+|..-. ...+++..-...-.-.+++||+++.+.. ..+...-. .-++.-.--++..+||||..
T Consensus 54 v~VvGDiHG~~~DL~~if~~~g~p~~~~ylFLGDYVDRG~~--slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ--SLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCTTSSCEEECSCCSSSSSC--HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCChHhHHHHHhhcCCCccceEEeeccccCCCcc--chHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 799999985421 1223332222333458999999986653 34433222 12233335689999999984
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.40 E-value=0.088 Score=45.81 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=40.7
Q ss_pred EEEEEcccCCCCChHHHHHHhhc--CCC--cEEEeccccccccchhhhHHHHHHh-hHhhhhCCceeecCCCCccC
Q 017051 138 TFAVAGDLGQTGWTKSTLDHIGQ--CKY--DVHLLPGDLSYADYMQHRWDTFGEL-VQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 138 ~f~~~gD~~~~~~~~~~~~~i~~--~~~--d~vi~~GDl~~~~~~~~~~~~~~~~-~~~l~~~~P~~~v~GNHD~~ 208 (378)
.+.++||+|.. ...+++-++. ..+ .-.|++||+++.+.. ..+.+.-. .-++.-.--++.++||||..
T Consensus 61 pv~VvGDiHGq--~~DL~~if~~~g~p~~~~~ylFLGDYVDRG~~--slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 61 KITVCGDTHGQ--FYDLLNIFELNGLPSETNPYIFNGDFVDRGSF--SVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp EEEEECCCTTC--HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTT--HHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CEEEEEECCCC--HHHHHHHHHHCCCCCCCCeEEEecccccCcCc--ceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 67899999855 3444444331 122 348999999987653 33433222 12223235689999999984
|
| >d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Rim binding protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.26 E-value=0.027 Score=41.28 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=45.4
Q ss_pred CCCCCCceEEEEe-cCCCeEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCC
Q 017051 38 KPSSHPQQVHISL-AGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (378)
Q Consensus 38 ~~~~~p~~v~l~~-~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~ 110 (378)
++...|..|.+.. .+.+++.|+|.-... .....+.|........ .. . . .........++|+||+
T Consensus 9 ~pp~pP~~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~-~~--~-----~-~~~~~~~~~~~i~~L~ 79 (117)
T d2cspa1 9 GPPAPPQDVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQR-VA--E-----V-IFPTADSTAVELVRLR 79 (117)
T ss_dssp CCCCCCEEEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSE-EE--E-----E-CCTTCSEEEEESHHHH
T ss_pred CCCCCCCccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeeccc-ce--e-----e-eeeccceeeeeccCCC
Confidence 3445788887754 347799999985321 1233566765332111 11 0 0 0123345567899999
Q ss_pred CCCEEEEEeCc
Q 017051 111 HDTVYFYRCGR 121 (378)
Q Consensus 111 p~t~Y~Y~v~~ 121 (378)
|++.|.+||..
T Consensus 80 ~~t~Y~v~V~A 90 (117)
T d2cspa1 80 SLEAKGVTVRT 90 (117)
T ss_dssp HHTCSCBEEEE
T ss_pred CCcEEEEEEEE
Confidence 99999999864
|
| >d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.84 E-value=0.11 Score=36.27 Aligned_cols=66 Identities=9% Similarity=0.016 Sum_probs=36.7
Q ss_pred CCCceEEEEecC-CCeEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCC
Q 017051 41 SHPQQVHISLAG-DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (378)
Q Consensus 41 ~~p~~v~l~~~~-~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p 111 (378)
..|..|.+.... ++.+.|.|....... .-.|+|+...+.......-. .. ++..|.|
T Consensus 3 dPP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~~L~Yev~y~~~~~~~~~~~~~~----------~~-----t~~~L~p 67 (94)
T d3d85d3 3 DPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFT----------DK-----TSATVIC 67 (94)
T ss_dssp CCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CEEEE----------SS-----SEEEECC
T ss_pred CCCcccEEEEecCCCeEEEEecCCCCcCCCCCeEEEEEEEEEEECCCCccEEeccc----------cc-----eEEEecC
Confidence 378889888764 678999999875321 13666766543322111111 11 1125889
Q ss_pred CCEEEEEeCc
Q 017051 112 DTVYFYRCGR 121 (378)
Q Consensus 112 ~t~Y~Y~v~~ 121 (378)
|+.|.+||..
T Consensus 68 ~~~Y~v~VRa 77 (94)
T d3d85d3 68 RKNASISVRA 77 (94)
T ss_dssp CSSCEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999999975
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.81 E-value=0.076 Score=48.44 Aligned_cols=66 Identities=18% Similarity=0.195 Sum_probs=38.5
Q ss_pred EEEEcccCCCCChHHHHHHhh---cCCCcEEEeccccccccchhhhHHHHHHh-hHhhhhCCceeecCCCCccC
Q 017051 139 FAVAGDLGQTGWTKSTLDHIG---QCKYDVHLLPGDLSYADYMQHRWDTFGEL-VQPLASARPWMVTQGNHEKE 208 (378)
Q Consensus 139 f~~~gD~~~~~~~~~~~~~i~---~~~~d~vi~~GDl~~~~~~~~~~~~~~~~-~~~l~~~~P~~~v~GNHD~~ 208 (378)
+.++||+|..- ..+++-+. ...-.-.|++||+++.+.. ..+.+.-+ .-++.-.--++.+.||||..
T Consensus 72 v~VvGDIHGq~--~DLl~If~~~G~P~~~~yLFLGDYVDRG~~--SlEvlllL~aLKi~yP~~V~LLRGNHE~~ 141 (473)
T d1auia_ 72 VTVCGDIHGQF--FDLMKLFEVGGSPANTRYLFLGDYVDRGYF--SIECVLYLWALKILYPKTLFLLRGNHECR 141 (473)
T ss_dssp EEEECCCTTCH--HHHHHHHHHHCCTTTCCEEECSCCSSSSSC--HHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred EEEEEeCCCCH--HHHHHHHHHcCCCCcceEEecCccccCCcc--cHHHHHHHHHHHHhCCCeEEEeCCCCccH
Confidence 78899998552 33333332 2222347899999987654 22322111 11223235699999999973
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.02 E-value=0.34 Score=33.40 Aligned_cols=71 Identities=13% Similarity=-0.058 Sum_probs=40.4
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCCCc--EEEEeccCCCCCe-eEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESSPS--VVEYGTSPGGYNC-GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~~~--~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
.|..|.+...+ ..+++.|.-....+.. .+++......... ..... .........++++|.+++.|.+|
T Consensus 3 ~P~nv~v~s~n-~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~Y~fR 73 (98)
T d1fyhb1 3 TPTNVTIESYN-MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACI--------NISHHYCNISDHVGDPSNSLWVR 73 (98)
T ss_dssp CCEEEEEECBS-SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEE--------EESSSEEECGGGCCSTTSCEEEE
T ss_pred cCCceEEEEeC-CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeee--------ecccceeeeEecccCCCCEEEEE
Confidence 58888776444 4457999976443322 2333332221111 11111 12334555678899999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 74 V~A 76 (98)
T d1fyhb1 74 VKA 76 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.97 E-value=0.4 Score=34.37 Aligned_cols=68 Identities=19% Similarity=0.150 Sum_probs=36.0
Q ss_pred CCCCCceEEEEecCCCeEEEEEEcCCC--CC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCC
Q 017051 39 PSSHPQQVHISLAGDSHMRVTWITDDE--SS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (378)
Q Consensus 39 ~~~~p~~v~l~~~~~~~~~i~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~ 112 (378)
++..|..+ +...+.++++|.|..... .. .-.|+|+........... . .. ...+.+|+|+
T Consensus 18 P~~pp~~~-~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~-~----------~~---~~~~~~L~p~ 82 (117)
T d1wj3a_ 18 PSQPPGNV-VWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-T----------NK---TSAELVLPIK 82 (117)
T ss_dssp CCCCCCSC-BCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-E----------SS---SEEEEECCCS
T ss_pred cCCCCcce-EEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeee-c----------ee---eEEEeeccCC
Confidence 33344444 333458899999986321 11 124555554432211111 1 11 1234589999
Q ss_pred CEEEEEeCc
Q 017051 113 TVYFYRCGR 121 (378)
Q Consensus 113 t~Y~Y~v~~ 121 (378)
+.|.+||..
T Consensus 83 t~Y~~~V~A 91 (117)
T d1wj3a_ 83 EDYIIEVKA 91 (117)
T ss_dssp SCEEEEEEE
T ss_pred cEEEEEEEE
Confidence 999999864
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.76 E-value=0.19 Score=38.84 Aligned_cols=32 Identities=25% Similarity=0.151 Sum_probs=24.2
Q ss_pred EEEEEECCCCCCCEEEEEeCc-----------cCceeEEECCC
Q 017051 101 IHHTVIGPLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (378)
Q Consensus 101 ~h~~~l~~L~p~t~Y~Y~v~~-----------~s~~~~F~t~p 132 (378)
..+.+|+||+|+|.|.++|.. .+....+||+|
T Consensus 154 ~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 154 KESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp CSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred eEEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 346889999999999999863 13456677776
|
| >d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-10 receptor 1, IL-10R1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.18 E-value=0.42 Score=33.34 Aligned_cols=72 Identities=15% Similarity=-0.035 Sum_probs=42.3
Q ss_pred CCceEEEEecCCCeEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeccCeEEEEEECCCCCCCEEEEE
Q 017051 42 HPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (378)
Q Consensus 42 ~p~~v~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~l~~L~p~t~Y~Y~ 118 (378)
.|..|+|... ....++.|.-..... .-.|||.......+..+..- .. .........+.+|.++..|++|
T Consensus 6 ~P~nv~~~s~-n~~~~L~W~pp~~~g~~~~Y~Ve~~~~~~~~W~~v~~c-~~------~t~~~~~~~~~~l~~~~~Y~fR 77 (99)
T d1y6kr1 6 SPPSVWFEAE-FFHHILHWTPIPQQSESTCYEVALLRYGIESWNSISQC-SQ------TLSYDLTAVTLDLYHSNGYRAR 77 (99)
T ss_dssp CCSCEEEEEE-TTEEEEEECCCTTCCTTCEEEEEEEETTSCCCEEEEEE-ES------SSEEECGGGGTTGGGSSCEEEE
T ss_pred CCCcceEEEE-CCEEEEEEcCCCCcCCCCEEEEEEEECCCcceEEEEee-cc------ccccceeeeeeecCCCCEEEEE
Confidence 5788877633 457889997443322 35788876654444333221 10 1111112236789999999999
Q ss_pred eCc
Q 017051 119 CGR 121 (378)
Q Consensus 119 v~~ 121 (378)
|..
T Consensus 78 VrA 80 (99)
T d1y6kr1 78 VRA 80 (99)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
|